Pregenerated sensors for DKC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031403Ensembl transcript IDs: ENSMUST00000033776.15, ENSMUST00000131155.8, ENSMUST00000132000.8, ENSMUST00000140609.8, ENSMUST00000153844.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTTCACTCATGACTCCAGAACGCACCCTCCGAAGTTCCTGCATCTaGCCACCAACTCCCAGTAACAAGCCAAGGTGTACGCATAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: FSLMTPERTLRSSCI*PPTPSNKPRCTHSV Trigger: GACACTATGCGTACACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCGGAGGGTGCGTTCTGGAGTCATGAGTGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| 3UTR GCA 90 bp | CTCCCAGTAACAAGCCAAGGTGTACGCATAGTGTCCGAATGTAGGTaGCAGCTTCACAGCTTACCCAAAAGATTCCTAATCTTCTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LPVTSQGVRIVSECR*QLHSLPKRFLIFSQ Trigger: CTGAGAGAAGATTAGGAATCTTTTGGGTAAGCTGTGAAGCTGGCACCTACATTCGGACACTATGCGTACACCTTGGCTTGTTACTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| 3UTR TCA 90 bp | CTATCCCGCTTCCTTTTTATGACATTTACTGCTTCAGCAGCTAACTaGGGGGCTTGTACTGCTTCGGTAACCAGTGTGTTCTTGCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LSRFLFMTFTASAAN*GACTASVTSVFLPE Trigger: TTCTGGCAAGAACACACTGGTTACCGAAGCAGTACAAGCCCCTCAGTTAGCTGCTGAAGCAGTAAATGTCATAAAAAGGAAGCGGGATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR CCA 90 bp | TGTTCTTGCCAGAATCACTATAGTCAATGTAATCCTGTTTCCATGTaGCAGGGGTATTGTCTGTGGGTTTGCCATGCTTGTCCAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: CSCQNHYSQCNPVSM*QGYCLWVCHACPEG Trigger: GCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCCTGCCACATGGAAACAGGATTACATTGACTATAGTGATTCTGGCAAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR GCA 90 bp | ACCATGGTCACAGGTAGAAATCACTGCTGTAGTCATCAATGCAATTaGCATGCAGATAGCTTCCCCCTTAGTAGTAATGACCACAATCTC | + |
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Preference number: 1 (lower is better) Translates to: TMVTGRNHCCSHQCN*HADSFPLSSNDHNL Trigger: GAGATTGTGGTCATTACTACTAAGGGGGAAGCTATCTGCATGGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR GCA 90 bp | TACTATACCATGGTCACAGGTAGAAATCACTGCTGTAGTCATCAATaGAATTGCCATGCAGATAGCTTCCCCCTTAGTAGTAATGACCAC | + |
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Preference number: 1 (lower is better) Translates to: YYTMVTGRNHCCSHQ*NCHADSFPLSSNDH Trigger: GTGGTCATTACTACTAAGGGGGAAGCTATCTGCATGGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGTATAGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR GCA 90 bp | CCTCTTTATTTTGGCTACTATACCATGGTCACAGGTAGAAATCACTaGTGTAGTCATCAATGCAATTGCCATGCAGATAGCTTCCCCCTT | + |
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Preference number: 1 (lower is better) Translates to: PLYFGYYTMVTGRNH*CSHQCNCHADSFPL Trigger: AAGGGGGAAGCTATCTGCATGGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGTATAGTAGCCAAAATAAAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR CCA 90 bp | GTGTCTCTCTCCATGATCACCCTCTTTATTTTGGCTACTATACCATaGTCACAGGTAGAAATCACTGCTGTAGTCATCAATGCAATTGCC | + |
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Preference number: 1 (lower is better) Translates to: VSLSMITLFILATIP*SQVEITAVVINAIA Trigger: GGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGTATAGTAGCCAAAATAAAGAGGGTGATCATGGAGAGAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR-3UTR GCA 90 bp | AACGCACCCTCCGAAGTTCCTGCATCTGACCACCAACTCCCAGTAACAAGCCAAGTGTCCGAATGTAGGTaGCAGCTTCACAGCTTACCC | + |
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Preference number: 2 (lower is better) Translates to: NAPSEVPASDHQLPVTSQVSECR*QLHSLP Trigger: GGGTAAGCTGTGAAGCTGGCACCTACATTCGGACAC...TTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCGGAGGGTGCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAACCATGTCTAAAGGTGTaGCTTCCTCAAGCAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SVDQAGFELRNPPASASQPCLKV*LPQASR Trigger: TCTGCTTGCTTGAGGAAGCCACACCTTTAGACATGG...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR-3UTR CCA 90 bp | TCCATGTGGCAGGGGTATTGTCTGTGGGTTTGCCATGCTTGTCCAGAAGGCCCTATGACCACAATCTCCTaGTTGACCTCAATGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: SMWQGYCLWVCHACPEGPMTTIS*LTSMPS Trigger: AGATGGCATTGAGGTCAACCAGGAGATTGTGGTCAT...AGGGCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCCTGCCACATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR-3UTR GCA 90 bp | AACTGGGGAACTGTTGGGGTCTCATCACTTTCACTCTCACTATCCCGCTTCCTTTATTGTCTGTGGGTTTaGCATGCTTGTCCAGAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: NWGTVGVSSLSLSLSRFLYCLWV*HACPEG Trigger: GCCTTCTGGACAAGCATGGCAAACCCACAGACAATA...AAGGAAGCGGGATAGTGAGAGTGAAAGTGATGAGACCCCAACAGTTCCCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGGGGAACTGTTGGGGTCTCATCACTTTCACTCTCACTATCCCGCTTCCTTAATCCTGTTTCCATGTaGCAGGGGTATTGTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: NWGTVGVSSLSLSLSRFLNPVSM*QGYCLW Trigger: CCACAGACAATACCCCTGCCACATGGAAACAGGATT...AAGGAAGCGGGATAGTGAGAGTGAAAGTGATGAGACCCCAACAGTTCCCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTTGCCAGAATCACTATAGTCAATGTAATCCTGTTTCCATGTGGCAGGGGTTGTCCAGAAGGCCCTaGTTGATCATCATCTTCTTC | + |
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Preference number: 2 (lower is better) Translates to: CSCQNHYSQCNPVSMWQGLSRRP*LIIIFF Trigger: GAAGAAGATGATGATCAAGCAGGGCCTTCTGGACAA...CCCCTGCCACATGGAAACAGGATTACATTGACTATAGTGATTCTGGCAAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR-3UTR CCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGCAGAACTTTCTACTCTaGGACCTCTGTTCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VGGKGLILSLISLKQDRMQNFLL*DLCSPS Trigger: TGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTG...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGTGTTCTTGCCAGAATCACTATAGTCAATGTAATCCTGTTTCCATGTGGAAGTGTCTCTCTCCATaGTCACCCTCTTTATTTTGG | + |
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Preference number: 2 (lower is better) Translates to: PVCSCQNHYSQCNPVSMWKCLSP*SPSLFW Trigger: CCAAAATAAAGAGGGTGATCATGGAGAGAGACACTT...CCACATGGAAACAGGATTACATTGACTATAGTGATTCTGGCAAGAACACACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR-3UTR GCA 90 bp | ACTATAGTCAATGTAATCCTGTTTCCATGTGGCAGGGGTATTGTCTGTGGGTTTACAGGTAGAAATCACTaGTGTAGTCATCAATGCAAT | + |
|
Preference number: 2 (lower is better) Translates to: TIVNVILFPCGRGIVCGFTGRNH*CSHQCN Trigger: ATTGCATTGATGACTACAGCAGTGATTTCTACCTGT...AAACCCACAGACAATACCCCTGCCACATGGAAACAGGATTACATTGACTATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR TCA 72 bp | ATGACTCCAGAACGCACCCTCCGAAGTTCCTGCATCTaGCCACCAACTCCCAGTAACAAGCCAAGGTGTACG | + |
|
Preference number: 3 (lower is better) Translates to: MTPERTLRSSCI*PPTPSNKPRCT Trigger: CGTACACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCGGAGGGTGCGTTCTGGAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| 3UTR GCA 72 bp | TTCCATGTGGCAGGGGTATTGTCTGTGGGTTTGCCATaGTTGTCCAGAAGGCCCTGCTTGATCATCATCTTC | + |
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Preference number: 3 (lower is better) Translates to: FHVAGVLSVGLP*LSRRPCLIIIF Trigger: GAAGATGATGATCAAGCAGGGCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCCTGCCACATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR TCA 72 bp | ACAGGATGGGATGAGATGGCCACACCAGCTAACCACTaGGGTCACAAGTGGCAGCTAAAAGTATACCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: TGWDEMATPANH*GHKWQLKVYQN Trigger: GTTCTGGTATACTTTTAGCTGCCACTTGTGACCTCAGTGGTTAGCTGGTGTGGCCATCTCATCCCATCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR CCA 72 bp | TCTCATATCCTTAAAACAGGACAGGATGGGATGAGATaGCCACACCAGCTAACCACTGAGGTCACAAGTGGC | + |
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Preference number: 3 (lower is better) Translates to: SHILKTGQDGMR*PHQLTTEVTSG Trigger: GCCACTTGTGACCTCAGTGGTTAGCTGGTGTGGCCATCTCATCCCATCCTGTCCTGTTTTAAGGATATGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR-3UTR CAA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAAGGTACAGGAATGCTTaGGCTTCCATAAGAAACACA | + |
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Preference number: 3 (lower is better) Translates to: SVDQAGFELRNPPASASQRYRNA*ASIRNT Trigger: TGTGTTTCTTATGGAAGCCAAAGCATTCCTGTACCT...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR-3UTR CAA 90 bp | AACTGGGGAACTGTTGGGGTCTCATCACTTTCACTCTCACTATCCCGCTTCCTTTCATCTTCTTCTGACTaGCCTTTGGACCTAAACCCC | + |
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Preference number: 3 (lower is better) Translates to: NWGTVGVSSLSLSLSRFLSSSSD*PLDLNP Trigger: GGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGATGA...AAGGAAGCGGGATAGTGAGAGTGAAAGTGATGAGACCCCAACAGTTCCCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR GCA 72 bp | ACAAGCCAAGGTGTACGCATAGTGTCCGAATGTAGGTaGCAGCTTCACAGCTTACCCAAAAGATTCCTAATC | + |
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Preference number: 3 (lower is better) Translates to: TSQGVRIVSECR*QLHSLPKRFLI Trigger: GATTAGGAATCTTTTGGGTAAGCTGTGAAGCTGGCACCTACATTCGGACACTATGCGTACACCTTGGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| 3UTR CCA 72 bp | AAAGGTGTGGCTTCCTCAAGCAAGCAGAGGGGTTGGTaGCAAAGGCCTGATTTTATCTCTCATATCCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: KGVASSSKQRGW*QRPDFISHILK Trigger: TTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAACCCCTCTGCTTGCTTGAGGAAGCCACACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR TCA 72 bp | TTCCTTTTTATGACATTTACTGCTTCAGCAGCTAACTaGGGGGCTTGTACTGCTTCGGTAACCAGTGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: FLFMTFTASAAN*GACTASVTSVF Trigger: GAACACACTGGTTACCGAAGCAGTACAAGCCCCTCAGTTAGCTGCTGAAGCAGTAAATGTCATAAAAAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR GCA 72 bp | ATGGTCACAGGTAGAAATCACTGCTGTAGTCATCAATaGAATTGCCATGCAGATAGCTTCCCCCTTAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: MVTGRNHCCSHQ*NCHADSFPLSS Trigger: ACTACTAAGGGGGAAGCTATCTGCATGGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| 3UTR GCA 72 bp | TTTGGCTACTATACCATGGTCACAGGTAGAAATCACTaGTGTAGTCATCAATGCAATTGCCATGCAGATAGC | + |
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Preference number: 3 (lower is better) Translates to: FGYYTMVTGRNH*CSHQCNCHADS Trigger: GCTATCTGCATGGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGTATAGTAGCCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| CDS-3UTR CCA 90 bp | CTTTTCACTCATGACTCCAGAACGCACCCTCCGAAGTTCCTGCATCTGACCACCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LFTHDSRTHPPKFLHLTTQATTS*EEGLEG Trigger: GCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTG...GGTGGTCAGATGCAGGAACTTCGGAGGGTGCGTTCTGGAGTCATGAGTGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGAACGCACCCTCCGAAGTTCCTGCATCTGACCACCAACTCCCAGTAACAGCCTGCACTCTGTTGTaGTTTCACCAAACGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LQNAPSEVPASDHQLPVTACTLL*FHQTSG Trigger: GCCACTCGTTTGGTGAAATCACAACAGAGTGCAGGC...TGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCGGAGGGTGCGTTCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR CCA 90 bp | GCACCCTCCGAAGTTCCTGCATCTGACCACCAACTCCCAGTAACAAGCCAAGGTTACTGCAGCAATAAGTaGGGGTCGCTGAAACAGGGC | + |
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Preference number: 4 (lower is better) Translates to: APSEVPASDHQLPVTSQGYCSNK*GSLKQG Trigger: GCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTA...ACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCGGAGGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR TCA 90 bp | GTTCCTGCATCTGACCACCAACTCCCAGTAACAAGCCAAGGTGTACGCATAGTGATAAGTGGGGGTCGCTaGAACAGGGCACCTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VPASDHQLPVTSQGVRIVISGGR*NRAPVR Trigger: TCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTAT...CACTATGCGTACACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR CCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAATCTAGTGTGCCACTGTaGCCAGTCTTCTCTACCCGA | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQSSVPL*PVFSTR Trigger: TCGGGTAGAGAAGACTGGCCACAGTGGCACACTAGA...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| 3UTR CAA 72 bp | TCCTGTTTCCATGTGGCAGGGGTATTGTCTGTGGGTTaGCCATGCTTGTCCAGAAGGCCCTGCTTGATCATC | + |
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Preference number: 4 (lower is better) Translates to: SCFHVAGVLSVG*PCLSRRPCLII Trigger: GATGATCAAGCAGGGCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCCTGCCACATGGAAACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| CDS-3UTR TCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAACCTCTTCAGAGGATTTaGACCACAAGGAAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQPLQRI*TTRKRC Trigger: ACACCTCTTCCTTGTGGTTCAAATCCTCTGAAGAGG...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR TCA 90 bp | AACGCACCCTCCGAAGTTCCTGCATCTGACCACCAACTCCCAGTAACAAGCCAACCTCTTCAGAGGATTTaGACCACAAGGAAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: NAPSEVPASDHQLPVTSQPLQRI*TTRKRC Trigger: ACACCTCTTCCTTGTGGTTCAAATCCTCTGAAGAGG...TTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCGGAGGGTGCGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR GCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGTCCTCACTCGAAGCTaGCTCTTTACTGCAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQVLTRS*LFTAAI Trigger: TATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAGGAC...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGCATCGAGTACATCATaGATTGTCACCATGTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQASSTS*IVTMWS Trigger: GGACCACATGGTGACAATGCATGATGTACTCGATGC...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAATATTGTCTGTGGGTTTaGCATGCTTGTCCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQYCLWV*HACPEG Trigger: GCCTTCTGGACAAGCATGGCAAACCCACAGACAATA...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR TCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAATTATCATACAGCCACTaGGCATCGAGTACATCATGC | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQLSYSH*ASSTSC Trigger: GCATGATGTACTCGATGCTCAGTGGCTGTATGATAA...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR TCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAACCCGCTTCCTTTTTATaGCATTTACTGCTTCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQPASFL*HLLLQQ Trigger: CTGCTGAAGCAGTAAATGTCATAAAAAGGAAGCGGG...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAACCTTCAATAGCATTGTaGAGCCGGACAATTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQPSIAL*SRTIPT Trigger: TGTTGGAATTGTCCGGCTGCACAATGCTATTGAAGG...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | GTTCCTGCATCTGACCACCAACTCCCAGTAACAAGCCAAGGTGTACGCATAGTGGTCCTCACTCGAAGCTaGCTCTTTACTGCAGCAATA | + |
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Preference number: 4 (lower is better) Translates to: VPASDHQLPVTSQGVRIVVLTRS*LFTAAI Trigger: TATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAGGAC...CACTATGCGTACACCTTGGCTTGTTACTGGGAGTTGGTGGTCAGATGCAGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR GCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGGCCCCATAGCAGATTaGATTCACTGCACTATCTTT | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQGPIAD*IHCTIF Trigger: AAAGATAGTGCAGTGAATGCAATCTGCTATGGGGCC...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | GGGGTATTGTCTGTGGGTTTGCCATGCTTGTCCAGAAGGCCCTGCTTGATCATCGGCCCCATAGCAGATTaGATTCACCTAATCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GVLSVGLPCLSRRPCLIIGPIAD*IHLIFS Trigger: AGAGAAGATTAGGTGAATGCAATCTGCTATGGGGCC...GATGATCAAGCAGGGCCTTCTGGACAAGCATGGCAAACCCACAGACAATACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
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| CDS-3UTR CCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAATGACCACAATCTCCTaGTTGACCTCAATGCCATCT | + |
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Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQMTTIS*LTSMPS Trigger: AGATGGCATTGAGGTCAACCAGGAGATTGTGGTCAT...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR TCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAAAGTGTCTCTCTCCATaGTCACCCTCTTTATTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQKCLSP*SPSLFW Trigger: CCAAAATAAAGAGGGTGATCATGGAGAGAGACACTT...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR GCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAGAGTGGCTCGTTCAATaGACACAATTAAACAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQEWLVQ*TQLNNQ Trigger: CTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTC...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR TCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGATAAGTGGGGGTCGCTaGAACAGGGCACCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMISGGR*NRAPVR Trigger: TCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTAT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR TCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGGGTCCTTTTCACTCATaGCTCCAGAACGCACCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMGPFHS*LQNAPS Trigger: GGAGGGTGCGTTCTGGAGTCATGAGTGAAAAGGACC...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGTCTGTGGGTTTGCCATaGTTGTCCAGAAGGCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMSVGLP*LSRRPC Trigger: GCAGGGCCTTCTGGACAAGCATGGCAAACCCACAGA...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR CCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFQATTS*EEGLEG Trigger: GCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTG...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR CCA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAATCACCCTCTTTATTTTaGCTACTATACCATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVDQAGFELRNPPASASQSPSLF*LLYHGH Trigger: GTGACCATGGTATAGTAGCCAAAATAAAGAGGGTGA...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR TCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGGCCTGCACTCTGTTGTaGTTTCACCAAACGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMACTLL*FHQTSG Trigger: GCCACTCGTTTGGTGAAATCACAACAGAGTGCAGGC...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR TCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGAGGGCCCTAGAAAGCTaGGTACCCCCTTCAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMRALES*VPPSIA Trigger: TGCTATTGAAGGGGGTACTCAGCTTTCTAGGGCCCT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR CCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGTACTGCAGCAATAAGTaGGGGTCGCTGAAACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMYCSNK*GSLKQG Trigger: GCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTA...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR TCA 90 bp | ATGATCACCCTCTTTATTTTGGCTACTATACCATGGTCACAGGTAGAAATCACTATAAGTGGGGGTCGCTaGAACAGGGCACCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: MITLFILATIPWSQVEITISGGR*NRAPVR Trigger: TCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTAT...AGTGATTTCTACCTGTGACCATGGTATAGTAGCCAAAATAAAGAGGGTGATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
||
| CDS-3UTR TCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCCGAAGTTCCTGCATCTaGCCACCAACTCCCAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFRSSCI*PPTPSN Trigger: GTTACTGGGAGTTGGTGGTCAGATGCAGGAACTTCG...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR GCA 90 bp | GTACGCATAGTGTCCGAATGTAGGTGCCAGCTTCACAGCTTACCCAAAAGATTCGAGTGGCTCGTTCAATaGACACAATTAAACAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRIVSECRCQLHSLPKRFEWLVQ*TQLNNQ Trigger: CTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTC...GAATCTTTTGGGTAAGCTGTGAAGCTGGCACCTACATTCGGACACTATGCGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGGTCACAGGTAGAAATCACTGCTGTAGTCATCAATGCAATTGCCATGCAGTCCTCACTCGAAGCTaGCTCTTTACTGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: TMVTGRNHCCSHQCNCHAVLTRS*LFTAAI Trigger: TATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAGGAC...TGCATGGCAATTGCATTGATGACTACAGCAGTGATTTCTACCTGTGACCATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
||
| CDS-3UTR GCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCGTGTCCGAATGTAGGTaGCAGCTTCACAGCTTACCC | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFVSECR*QLHSLP Trigger: GGGTAAGCTGTGAAGCTGGCACCTACATTCGGACAC...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR CCA 90 bp | CATGATCACCCTCTTTATTTTGGCTACTATACCATGGTCACAGGTAGAAATCACTACTGCAGCAATAAGTaGGGGTCGCTGAAACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HDHPLYFGYYTMVTGRNHYCSNK*GSLKQG Trigger: GCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTA...GTGATTTCTACCTGTGACCATGGTATAGTAGCCAAAATAAAGAGGGTGATCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153844.8 |
||
| CDS-3UTR CCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGCAGGGGTATTGTCTGTaGGTTTGCCATGCTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMQGYCL*VCHACP Trigger: TGGACAAGCATGGCAAACCCACAGACAATACCCCTG...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR GCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCAAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFKLPLY*SNKWGS Trigger: CGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTT...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGGACCTAAACCCCACTTaGGAGGATAAGTGTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMDLNPT*EDKCLS Trigger: AGAGAGACACTTATCCTCGCAAGTGGGGTTTAGGTC...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCAATCCTGTTTCCATGTaGCAGGGGTATTGTCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFNPVSM*QGYCLW Trigger: CCACAGACAATACCCCTGCCACATGGAAACAGGATT...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR GCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCAGTCATCAATGCAATTaGCATGCAGATAGCTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFSHQCN*HADSFP Trigger: GGGGAAGCTATCTGCATGGCAATTGCATTGATGACT...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR GCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCTTGTCCAGAAGGCCCTaGTTGATCATCATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFLSRRP*LIIIFF Trigger: GAAGAAGATGATGATCAAGCAGGGCCTTCTGGACAA...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGTGCATTGTCACCATGTaGTCCTTTTCACTCATGACT | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMCIVTM*SFSLMT Trigger: AGTCATGAGTGAAAAGGACCACATGGTGACAATGCA...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR TCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGATAACCAGACGTTTATaGGATGTCAACAGCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMITRRL*DVNSFS Trigger: GGAAAAGCTGTTGACATCTCATAAACGTCTGGTTAT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR TCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGATCATCATCTTCTTCTaGCTTGCCTTTGGACCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMIIIFF*LAFGPK Trigger: TTTAGGTCCAAAGGCAAGTCAGAAGAAGATGATGAT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGTTCCAACATACTCTTTaGCTGCACTCTGTTGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMFQHTL*LHSVVI Trigger: AATCACAACAGAGTGCAGGCAAAGAGTATGTTGGAA...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CCA 90 bp | GTGTCCGAATGTAGGTGCCAGCTTCACAGCTTACCCAAAAGATTCCTAATCTTCCTTCTTATGCTTCTTTaGGAATGTAATTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSECRCQLHSLPKRFLIFLLMLL*ECNYFC Trigger: GCAGAAGTAATTACATTCCCAAAGAAGCATAAGAAG...GAAGATTAGGAATCTTTTGGGTAAGCTGTGAAGCTGGCACCTACATTCGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR CCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGTTGGCTACTATACCATaGTCACAGGTAGAAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMLATIP*SQVEIT Trigger: AGTGATTTCTACCTGTGACCATGGTATAGTAGCCAA...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCGCAGATTGCATTCACTaGACTATCTTTCATAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFADCIH*TIFHNQ Trigger: CTGGTTATGAAAGATAGTGCAGTGAATGCAATCTGC...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR GCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGACAGGTAGAAATCACTaGTGTAGTCATCAATGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMTGRNH*CSHQCN Trigger: ATTGCATTGATGACTACAGCAGTGATTTCTACCTGT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CCA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGCTTCTTATGCTTCTTTaGGAATGTAATTACTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGGKGLILSLISLKQDRMLLMLL*ECNYFC Trigger: GCAGAAGTAATTACATTCCCAAAGAAGCATAAGAAG...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CCA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCTTTCTAGCACAGTTTTaGGCTTCTTATCCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPELSTLGPLFSLNKKFFFLAQF*ASYPSS Trigger: AGAAGAAGGATAAGAAGCCCAAAACTGTGCTAGAAA...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS TCA 90 bp | CTCACTCGAAGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAACAGGGCACCTGTCAGAGTTTCTAGGGCCTGCACTCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTRSCLFTAAISGGR*NRAPVRVSRACTLL Trigger: CAACAGAGTGCAGGCCCTAGAAACTCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
||
| CDS GCA 90 bp | CATTTTGCTCTCGTAGATAGTCCTCACTCGAAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCGCTGAAACAGGGCACCTGTCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFALVDSPHSKLPLY*SNKWGSLKQGTCQS Trigger: ACTCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAGGACTATCTACGAGAGCAAAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 ENSMUST00000153844.8 |
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| CDS CCA 90 bp | GTCTTCTCTACCCGAAGTATTCGTCGGATCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGCTTGTCAAGATTAATGAAACCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: VFSTRSIRRIQATTS*EEGLEGLSRLMKPV Trigger: GACCGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTGGATCCGACGAATACTTCGGGTAGAGAAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000132000.8 ENSMUST00000140609.8 |
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| CDS-3UTR CAA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAAAACAACCAGTCACTTaGGGATCTAGTGTGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: SVDQAGFELRNPPASASQKQPVT*GSSVPL Trigger: CAGTGGCACACTAGATCCCAAAGTGACTGGTTGTTT...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS CCA 90 bp | CACACAATTAAACAACCAGTCACTTTGGGATCTAGTGTGCCACTGTaGCCAGTCTTCTCTACCCGAAGTATTCGTCGGATCCAGGCTACC | + |
|
Preference number: 5 (lower is better) Translates to: HTIKQPVTLGSSVPL*PVFSTRSIRRIQAT Trigger: GGTAGCCTGGATCCGACGAATACTTCGGGTAGAGAAGACTGGCCACAGTGGCACACTAGATCCCAAAGTGACTGGTTGTTTAATTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAATTCCAACATACTCTTaGCCTGCACTCTGTTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVDQAGFELRNPPASASQIPTYS*PALCCD Trigger: ATCACAACAGAGTGCAGGCAAAGAGTATGTTGGAAT...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR CAA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGGTGGGTTTGCCATGCTaGTCCAGAAGGCCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VGGKGLILSLISLKQDRMVGLPC*SRRPCL Trigger: CAAGCAGGGCCTTCTGGACAAGCATGGCAAACCCAC...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS GCA 90 bp | GTTCAATGCACACAATTAAACAACCAGTCACTTTGGGATCTAGTGTaGCACTGTGGCCAGTCTTCTCTACCCGAAGTATTCGTCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VQCTQLNNQSLWDLV*HCGQSSLPEVFVGS Trigger: GGATCCGACGAATACTTCGGGTAGAGAAGACTGGCCACAGTGGCACACTAGATCCCAAAGTGACTGGTTGTTTAATTGTGTGCATTGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 |
||
| CDS GCA 90 bp | GGCCTGCACTCTGTTGTGATTTCACCAAACGAGTGGCTCGTTCAATaGACACAATTAAACAACCAGTCACTTTGGGATCTAGTGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLHSVVISPNEWLVQ*TQLNNQSLWDLVCH Trigger: GTGGCACACTAGATCCCAAAGTGACTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTCGTTTGGTGAAATCACAACAGAGTGCAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
||
| CDS CCA 90 bp | GCCATGCAGATAGCTTCCCCCTTAGTAGTAATGACCACAATCTCCTaGTTGACCTCAATGCCATCTTCATATCGAAGAAGACCAGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AMQIASPLVVMTTIS*LTSMPSSYRRRPGS Trigger: GCTTCCTGGTCTTCTTCGATATGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGTCATTACTACTAAGGGGGAAGCTATCTGCATGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS GCA 90 bp | TGCCTGCACTCTGTTGTGATTTCACCAAACGAGTGGCTCGTTCAATaGACACAATTAAACAACCAGTCACTTTGGGATCTAGTGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CLHSVVISPNEWLVQ*TQLNNQSLWDLVCH Trigger: GTGGCACACTAGATCCCAAAGTGACTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTCGTTTGGTGAAATCACAACAGAGTGCAGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 |
||
| CDS-3UTR CAA 90 bp | TCTGTAGACCAGGCTGGCTTTGAACTCAGAAATCCACCTGCCTCTGCCTCCCAAAAATTCTTCAGCATGTaGTATTTCGGCAACATCATC | + |
|
Preference number: 5 (lower is better) Translates to: SVDQAGFELRNPPASASQKFFSM*YFGNII Trigger: GATGATGTTGCCGAAATACAACATGCTGAAGAATTT...TTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCAAAGCCAGCCTGGTCTACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
||
| CDS-3UTR CAA 90 bp | ATCATACAGCCACTGAGCATCGAGTACATCATGCATTGTCACCATGTGGTCCTTGAGGGGTTAGAGGGCTaGTCAAGATTAATGAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: IIQPLSIEYIMHCHHVVLEGLEG*SRLMKP Trigger: CGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTC...AAGGACCACATGGTGACAATGCATGATGTACTCGATGCTCAGTGGCTGTATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
||
| CDS-3UTR CAA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCCCCCCTTCAATAGCATaGTGCAGCCGGACAATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPELSTLGPLFSLNKKFFPPSIA*CSRTIP Trigger: TGGAATTGTCCGGCTGCACAATGCTATTGAAGGGGG...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGGTATTGTCTGTGGGTTaGCCATGCTTGTCCAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: VGGKGLILSLISLKQDRMVLSVG*PCLSRR Trigger: CCTTCTGGACAAGCATGGCAAACCCACAGACAATAC...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | CAAGGTGTACGCATAGTGTCCGAATGTAGGTGCCAGCTTCACAGCTTACCCAAAAAATTCTTCAGCATGTaGTATTTCGGCAACATCATC | + |
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Preference number: 5 (lower is better) Translates to: QGVRIVSECRCQLHSLPKKFFSM*YFGNII Trigger: GATGATGTTGCCGAAATACAACATGCTGAAGAATTT...TTTGGGTAAGCTGTGAAGCTGGCACCTACATTCGGACACTATGCGTACACCTTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS-3UTR CAA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGACCACAATCTCCTGGTaGACCTCAATGCCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VGGKGLILSLISLKQDRMTTISW*TSMPSS Trigger: TGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCTCTTCTGACTTGCCTTaGGACCTAAACCCCACTTGC | + |
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Preference number: 5 (lower is better) Translates to: IPELSTLGPLFSLNKKFFSSDLP*DLNPTC Trigger: GCAAGTGGGGTTTAGGTCCAAAGGCAAGTCAGAAGA...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGTCATCTTCTTCTGACTaGCCTTTGGACCTAAACCCC | + |
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Preference number: 5 (lower is better) Translates to: VGGKGLILSLISLKQDRMSSSSD*PLDLNP Trigger: GGGGTTTAGGTCCAAAGGCAAGTCAGAAGAAGATGA...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCTCAACTGGGGAACTGTaGGGGTCTCATCACTTTCAC | + |
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Preference number: 5 (lower is better) Translates to: IPELSTLGPLFSLNKKFFSTGEL*GSHHFH Trigger: GTGAAAGTGATGAGACCCCAACAGTTCCCCAGTTGA...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS CCA 90 bp | CAACATACTCTTTGCCTGCACTCTGTTGTGATTTCACCAAACGAGTaGCTCGTTCAATGCACACAATTAAACAACCAGTCACTTTGGGAT | + |
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Preference number: 5 (lower is better) Translates to: QHTLCLHSVVISPNE*LVQCTQLNNQSLWD Trigger: ATCCCAAAGTGACTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTCGTTTGGTGAAATCACAACAGAGTGCAGGCAAAGAGTATGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 |
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| CDS-3UTR CAA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCGAGGGGTTAGAGGGCTaGTCAAGATTAATGAAACCG | + |
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Preference number: 5 (lower is better) Translates to: IPELSTLGPLFSLNKKFFEGLEG*SRLMKP Trigger: CGGTTTCATTAATCTTGACAAGCCCTCTAACCCCTC...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | ATACCAGAACTTTCTACTCTGGGACCTCTGTTCTCCCTCAACAAAAAGTTTTTCTGGCCCCATAGCAGATaGCATTCACTGCACTATCTT | + |
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Preference number: 5 (lower is better) Translates to: IPELSTLGPLFSLNKKFFWPHSR*HSLHYL Trigger: AAGATAGTGCAGTGAATGCAATCTGCTATGGGGCCA...GAAAAACTTTTTGTTGAGGGAGAACAGAGGTCCCAGAGTAGAAAGTTCTGGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS-3UTR CAA 90 bp | GTTGGTGGCAAAGGCCTGATTTTATCTCTCATATCCTTAAAACAGGACAGGATGATCACCCTCTTTATTTaGGCTACTATACCATGGTCA | + |
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Preference number: 5 (lower is better) Translates to: VGGKGLILSLISLKQDRMITLFI*ATIPWS Trigger: TGACCATGGTATAGTAGCCAAAATAAAGAGGGTGAT...CATCCTGTCCTGTTTTAAGGATATGAGAGATAAAATCAGGCCTTTGCCACCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS TCA 72 bp | AGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAACAGGGCACCTGTCAGAGTTTCTAGGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SCLFTAAISGGR*NRAPVRVSRAC Trigger: GCAGGCCCTAGAAACTCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000140609.8 |
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| CDS TCA 72 bp | AGCTGCCTCTTTACTGCAGCAATAAGTGGGGGTCGCTaGAACAGGGCACCTGTCAGAGTTTCTAGGGCCCTA | + |
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Preference number: 6 (lower is better) Translates to: SCLFTAAISGGR*NRAPVRVSRAL Trigger: TAGGGCCCTAGAAACTCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000153844.8 |
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| CDS GCA 72 bp | CTCGTAGATAGTCCTCACTCGAAGCTGCCTCTTTACTaGAGCAATAAGTGGGGGTCGCTGAAACAGGGCACC | + |
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Preference number: 6 (lower is better) Translates to: LVDSPHSKLPLY*SNKWGSLKQGT Trigger: GGTGCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAGGACTATCTACGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 ENSMUST00000153844.8 |
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| CDS CCA 72 bp | CCTCACTCGAAGCTGCCTCTTTACTGCAGCAATAAGTaGGGGTCGCTGAAACAGGGCACCTGTCAGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: PHSKLPLYCSNK*GSLKQGTCQSF Trigger: GAAACTCTGACAGGTGCCCTGTTTCAGCGACCCCCACTTATTGCTGCAGTAAAGAGGCAGCTTCGAGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 ENSMUST00000153844.8 |
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| CDS CCA 72 bp | ACCCGAAGTATTCGTCGGATCCAGGCTACCACCTCATaGGAAGAGGGGTTAGAGGGCTTGTCAAGATTAATG | + |
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Preference number: 6 (lower is better) Translates to: TRSIRRIQATTS*EEGLEGLSRLM Trigger: CATTAATCTTGACAAGCCCTCTAACCCCTCTTCCCATGAGGTGGTAGCCTGGATCCGACGAATACTTCGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000132000.8 ENSMUST00000140609.8 |
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| CDS TCA 72 bp | CCTGATATAGTCCCCAATCTCCCTCTTCAGAGGATTTaGACCACAAGGAAGAGGTGTATAGTGTGCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: PDIVPNLPLQRI*TTRKRCIVCCP Trigger: AGGACAGCACACTATACACCTCTTCCTTGTGGTTCAAATCCTCTGAAGAGGGAGATTGGGGACTATATCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000132000.8 ENSMUST00000140609.8 |
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| CDS CAA 72 bp | GCTCGTTCAATGCACACAATTAAACAACCAGTCACTTaGGGATCTAGTGTGCCACTGTGGCCAGTCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: ARSMHTIKQPVT*GSSVPLWPVFS Trigger: AGAGAAGACTGGCCACAGTGGCACACTAGATCCCAAAGTGACTGGTTGTTTAATTGTGTGCATTGAACGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 |
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| CDS CAA 90 bp | ATGCAGATAGCTTCCCCCTTAGTAGTAATGACCACAATCTCCTGGTaGACCTCAATGCCATCTTCATATCGAAGAAGACCAGGAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: MQIASPLVVMTTISW*TSMPSSYRRRPGSM Trigger: CATGCTTCCTGGTCTTCTTCGATATGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGTCATTACTACTAAGGGGGAAGCTATCTGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS GCA 72 bp | ACACAATTAAACAACCAGTCACTTTGGGATCTAGTGTaGCACTGTGGCCAGTCTTCTCTACCCGAAGTATTC | + |
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Preference number: 6 (lower is better) Translates to: TQLNNQSLWDLV*HCGQSSLPEVF Trigger: GAATACTTCGGGTAGAGAAGACTGGCCACAGTGGCACACTAGATCCCAAAGTGACTGGTTGTTTAATTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 |
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| CDS CAA 72 bp | GCTTCCCCCTTAGTAGTAATGACCACAATCTCCTGGTaGACCTCAATGCCATCTTCATATCGAAGAAGACCA | + |
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Preference number: 6 (lower is better) Translates to: ASPLVVMTTISW*TSMPSSYRRRP Trigger: TGGTCTTCTTCGATATGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGTCATTACTACTAAGGGGGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS CAA 72 bp | CCATCTCCAGTTTCGCCCCCACTTTCTAGCACAGTTTaGGGCTTCTTATCCTTCTTCTTCTTCTTTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSPVSPPLSSTV*GFLSFFFFFSF Trigger: GAAGGAAAAGAAGAAGAAGAAGGATAAGAAGCCCAAAACTGTGCTAGAAAGTGGGGGCGAAACTGGAGATGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS CCA 72 bp | CTTTGCCTGCACTCTGTTGTGATTTCACCAAACGAGTaGCTCGTTCAATGCACACAATTAAACAACCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: LCLHSVVISPNE*LVQCTQLNNQS Trigger: TGACTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTCGTTTGGTGAAATCACAACAGAGTGCAGGCAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 |
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| CDS CCA 72 bp | GGCTTCTTATCCTTCTTCTTCTTCTTTTCCTTCAACTaGGGAACTGTTGGGGTCTCATCACTTTCACTCTCA | + |
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Preference number: 6 (lower is better) Translates to: GFLSFFFFFSFN*GTVGVSSLSLS Trigger: TGAGAGTGAAAGTGATGAGACCCCAACAGTTCCCCAGTTGAAGGAAAAGAAGAAGAAGAAGGATAAGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS CCA 72 bp | ATAGCTTCCCCCTTAGTAGTAATGACCACAATCTCCTaGTTGACCTCAATGCCATCTTCATATCGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: IASPLVVMTTIS*LTSMPSSYRRR Trigger: TCTTCTTCGATATGAAGATGGCATTGAGGTCAACCAGGAGATTGTGGTCATTACTACTAAGGGGGAAGCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033776.15 |
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| CDS CAA 72 bp | TATCATACAGCCACTGAGCATCGAGTACATCATGCATaGTCACCATGTGGTCCCAAAAGATTCCTAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: YHTATEHRVHHA*SPCGPKRFLIF Trigger: GAAGATTAGGAATCTTTTGGGACCACATGGTGACAATGCATGATGTACTCGATGCTCAGTGGCTGTATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131155.8 |
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| CDS GCA 72 bp | TCTGTTGTGATTTCACCAAACGAGTGGCTCGTTCAATaGACACAATTAAACAACCAGTCACTTTGGGATCTA | + |
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Preference number: 6 (lower is better) Translates to: SVVISPNEWLVQ*TQLNNQSLWDL Trigger: TAGATCCCAAAGTGACTGGTTGTTTAATTGTGTGCATTGAACGAGCCACTCGTTTGGTGAAATCACAACAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033776.15 ENSMUST00000131155.8 ENSMUST00000140609.8 |
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