RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for DHX8 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034931

Ensembl transcript IDs: ENSMUST00000039152.14, ENSMUST00000129741.2

Found 305 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATaGATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCT +
Preference number: 1 (lower is better)
Translates to: LQQAELGYQALVGLP*ISYSCPLPFPGCTP
Trigger: AGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR GCA 90 bp CATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTaGCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCA +
Preference number: 1 (lower is better)
Translates to: HSFSKQSWGIRPLWV*HASVTHVPCLSQDA
Trigger: TGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR CCA 90 bp ATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTaGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAG +
Preference number: 1 (lower is better)
Translates to: MVHSFSKQSWGIRPL*VCHASVTHVPCLSQ
Trigger: CTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR CCA 90 bp ACATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTaGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCAT +
Preference number: 1 (lower is better)
Translates to: TWNTSVMVHSFSKQS*GIRPLWVCHASVTH
Trigger: ATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR TCA 90 bp AAGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATaGAGAGAGTCAGGCTTCGAAAATGCTCAGTTTAAGATCAGTCAC +
Preference number: 1 (lower is better)
Translates to: KALAKALLKCFYLTL*RESGFENAQFKISH
Trigger: GTGACTGATCTTAAACTGAGCATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR-3UTR CCA 90 bp CAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCTGGCCCTGGCTGTCCTaGAACTCGCTCTGTAGACCA +
Preference number: 2 (lower is better)
Translates to: QSWGIRPLWVCHASVTHVWPWLS*NSLCRP
Trigger: TGGTCTACAGAGCGAGTTCCAGGACAGCCAGGGCCA...GACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR CAA 90 bp GTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTaGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: VMVHSFSKQSWGIRP*WVCHASVTHVPCLS
Trigger: GGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR-3UTR TCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTAGACCAGGCTGCCCTTaGACTCAGAGATCTTCCGGC +
Preference number: 2 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVARPGCP*TQRSSG
Trigger: GCCGGAAGATCTCTGAGTTCAAGGGCAGCCTGGTCT...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR-3UTR CCA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTTTCTCTGTGTGGCCCTaGCTGTCCTGGAACTCGCTC +
Preference number: 2 (lower is better)
Translates to: CISYSCPLPFPGCTPYLIFSVWP*LSWNSL
Trigger: GAGCGAGTTCCAGGACAGCCAGGGCCACACAGAGAA...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR-3UTR TCA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGATGCACACCTTATCTaGTTGTTCTTTTGTGTGTGT +
Preference number: 2 (lower is better)
Translates to: HECHGSFLQQAELGYQALDAHLI*LFFCVC
Trigger: ACACACACAAAAGAACAATCAGATAAGGTGTGCATC...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR GCA 72 bp GCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATaGATCAGTTACTCATGTCCCTTGCCTTTCCCAGGA +
Preference number: 3 (lower is better)
Translates to: AELGYQALVGLP*ISYSCPLPFPG
Trigger: TCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR-3UTR CAA 90 bp CAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCACCACAGGACTAGCTaGTCATCAGTCACAGGAAGC +
Preference number: 3 (lower is better)
Translates to: QSWGIRPLWVCHASVTHVHHRTS*SSVTGS
Trigger: GCTTCCTGTGACTGATGACAAGCTAGTCCTGTGGTG...GACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR CCA 72 bp ACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTaGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCA +
Preference number: 3 (lower is better)
Translates to: TSVMVHSFSKQS*GIRPLWVCHAS
Trigger: TGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR GCA 72 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATaGACACCTTATCTGATTGTTCTTTTGTGTGTGTGG +
Preference number: 3 (lower is better)
Translates to: CISYSCPLPFPG*TPYLIVLLCVW
Trigger: CCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR TCA 72 bp GCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATaGAGAGAGTCAGGCTTCGAAAATGCTCAGTTTAAG +
Preference number: 3 (lower is better)
Translates to: AKALLKCFYLTL*RESGFENAQFK
Trigger: CTTAAACTGAGCATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGGGTCAGAGATTCGGGTaGGCCGCTTGCGCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: PSASRAGVSGPCGSAMHQGQRFG*AACAPA
Trigger: CGCTGGAGCGCAAGCGGCTCACCCGAATCTCTGACC...CTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTGCGGCCCAGGCGAGTaGGCAGGCCCTCGTCGTCCA +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMCGPGE*AGPRRP
Trigger: TGGACGACGAGGGCCTGCTCACTCGCCTGGGCCGCA...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCACGGAGCTCAGAGATGTaGACCAGGCCTTCCCACCGC +
Preference number: 4 (lower is better)
Translates to: HSFSKQSWGIRPLWVCHARSSEM*TRPSHR
Trigger: GCGGTGGGAAGGCCTGGTGCACATCTCTGAGCTCCG...TGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGCTCCAGAGGGAACTCTaGCATCCTGCGGCCCAGGCG +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMLQREL*HPAAQA
Trigger: CGCCTGGGCCGCAGGATGGCAGAGTTCCCTCTGGAG...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGGCCACTCTTCTGGGCTaGGTACACCCAATCTTGCCC +
Preference number: 4 (lower is better)
Translates to: PSASRAGVSGPCGSAMHQATLLG*VHPILP
Trigger: GGGCAAGATTGGGTGTACCCAGCCCAGAAGAGTGGC...CTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCCTACTTCAGGAGCGCTaGCAAGGGAGAGGTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SFLQQAELGYQALVGLPCLLQER*QGRGEW
Trigger: CCACTCACCTCTCCCTTGTCAGCGCTCCTGAAGTAG...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGATACGGCCAGCAGGGTaGGGTGGTCCCCTTCTGTCT +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMIRPAG*GGPLLS
Trigger: AGACAGAAGGGGACCACCTCACCCTGCTGGCCGTAT...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGCTTCCCGCTGGGCCTaGTTCAGCTCCCGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HECHGSFLQQAELGYQALASRWA*FSSRLS
Trigger: GGAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGC...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCATGTTGGCAGCGATCTaGCTGCCTTCCGCATCGGGC +
Preference number: 4 (lower is better)
Translates to: LVGLPCISYSCPLPFPGCMLAAI*LPSASG
Trigger: GCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACAT...GCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGGGGTACACCCAATCTTaGCCCTGGAAGTATAGCCTG +
Preference number: 4 (lower is better)
Translates to: PSASRAGVSGPCGSAMHQGYTQS*PWKYSL
Trigger: CAGGCTATACTTCCAGGGGCAAGATTGGGTGTACCC...CTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACATCTCTGCTTCCCGCTaGGCCTGCTTCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: CGSAMHQLLMSLAFPRMHISASR*ACFSSR
Trigger: ACGGGAGCTGAAGCAGGCCCAGCGGGAAGCAGAGAT...GTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGGGGACAGCACTGTGCTaGCCAGGTTGGTTCTCTGGA +
Preference number: 4 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMGTALC*PGWFSG
Trigger: TCCAGAGAACCAACCTGGCCAGCACAGTGCTGTCCC...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp ACAGAGGCTGGGGAGTGGGTAGAGAGTGGGGCTGACATGGAACACGAGTGTCATAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTG +
Preference number: 4 (lower is better)
Translates to: TEAGEWVESGADMEHECHRTHCR*PSALGL
Trigger: CAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT...ATGACACTCGTGTTCCATGTCAGCCCCACTCTCTACCCACTCCCCAGCCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp GTAGACCAGGCTGCCCTTGAACTCAGAGATCTTCCGGCCTCTGCATCCCAAGCGGGTCTTTCCGATCTTTaGAGGGACTCTGACTTCTGC +
Preference number: 4 (lower is better)
Translates to: VDQAALELRDLPASASQAGLSDL*RDSDFC
Trigger: GCAGAAGTCAGAGTCCCTTCAAAGATCGGAAAGACC...CGCTTGGGATGCAGAGGCCGGAAGATCTCTGAGTTCAAGGGCAGCCTGGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp TGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCCCAGCGTGGCTGAGGTaGCAATCAGCTTCATGTCTT +
Preference number: 4 (lower is better)
Translates to: WFIPSASRAGVSGPCGSAPAWLR*QSASCL
Trigger: AAGACATGAAGCTGATTGTCACCTCAGCCACGCTGG...GGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTGCTGCTCCATGGCCGTaGTCAGAGTTTCCATCGGTG +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLAAPWP*SEFPSV
Trigger: CACCGATGGAAACTCTGATCACGGCCATGGAGCAGC...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCCTGCAGATGGCCTTCTaGACTCGGACTGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: WFIPSASRAGVSGPCGSALQMAF*TRTVDL
Trigger: CAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAG...GGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGCTTGGCCTGCTGCGCTaGGCATTAAAGCTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMLGLLR*ALKLPA
Trigger: AGCTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAAG...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp ACAGAGGCTGGGGAGTGGGTAGAGAGTGGGGCTGACATGGAACACGAGTGTCATACTCAGGAATGTCGTTaGGCATCATCCCAATCCCCC +
Preference number: 4 (lower is better)
Translates to: TEAGEWVESGADMEHECHTQECR*ASSQSP
Trigger: GGGGGATTGGGATGATGCCCAACGACATTCCTGAGT...ATGACACTCGTGTTCCATGTCAGCCCCACTCTCTACCCACTCCCCAGCCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGGCCAGGTTGGTTCTCTaGATTTCCGGTACATTGGTG +
Preference number: 4 (lower is better)
Translates to: PSASRAGVSGPCGSAMHQARLVL*ISGTLV
Trigger: CACCAATGTACCGGAAATCCAGAGAACCAACCTGGC...CTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCCTGTGGGTCCTTCTTaGCAGCGTTCCGGAAGAACC +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMPVGPS*QRSGRT
Trigger: GGTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGG...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGTCGGTGGGGCATCCATaGAGTCAAAGGACAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMSVGHP*SQRTAG
Trigger: ACCTGCTGTCCTTTGACTTCATGGATGCCCCACCGA...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGAGGCAAGTGGAGGGCGGTCCACATaGTTATCCCGCCATCTGTCC +
Preference number: 4 (lower is better)
Translates to: HRTSLSSVTGSHDTGEASGGRST*LSRHLS
Trigger: GGACAGATGGCGGGATAAGCATGTGGACCGCCCTCC...ACTTGCCTCTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTATGCTCTGCTTGGTATaGCCTCTCAGGAACGGAGGC +
Preference number: 4 (lower is better)
Translates to: HECHGSFLQQAELGYQALMLCLV*PLRNGG
Trigger: GCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCAT...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCGGAAGAACCCACTaGAGATGGCCTTCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLSGRTH*RWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGA...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCCGCTGCTGTTTCTTCTaGTTGCTTAGCTTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: WFIPSASRAGVSGPCGSARCCFF*LLSLVG
Trigger: CCCAACCAAGCTAAGCAAGCAGAAGAAACAGCAGCG...GGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCGATCTCCCACTTCTCTaGGTCAGAGATTCGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QSWGIRPLWVCHASVTHVDLPLL*VRDSGE
Trigger: CTCACCCGAATCTCTGACCCAGAGAAGTGGGAGATC...GACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR CAA 72 bp CATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTaGTGGGTCTGCCATGCATCAGTTACTCATGTCCCT +
Preference number: 4 (lower is better)
Translates to: HSFSKQSWGIRP*WVCHASVTHVP
Trigger: AGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGTCGTTGATGCCCAAGTaGTTGTCCAGCTCCGTGCAA +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMSLMPK*LSSSVQ
Trigger: TTGCACGGAGCTGGACAATCACTTGGGCATCAACGA...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGGTCTGGGTTCCGCATTaGCGTCTCTTCATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMVWVPH*RLFIGL
Trigger: GAGACCAATGAAGAGACGTCAATGCGGAACCCAGAC...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGGGGTCGATGGTGGTaGCCTCACGCATGTATTCCT +
Preference number: 4 (lower is better)
Translates to: HGTRVSWFIPSASRAGVSGGRWW*PHACIP
Trigger: AGGAATACATGCGTGAGGTCACCACCATCGACCCCC...TGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp GGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCGGTCCACATCCTTCATaGTCAGGCTGGTCTTGGTTC +
Preference number: 4 (lower is better)
Translates to: GTRVSWFIPSASRAGVSGGPHPS*SGWSWF
Trigger: GAACCAAGACCAGCCTGAGCATGAAGGATGTGGACC...GCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCTCATATCCATGCTCTaGTTGGTATGCCCTCTCAGG +
Preference number: 4 (lower is better)
Translates to: QSWGIRPLWVCHASVTHVLISML*LVCPLR
Trigger: CCTGAGAGGGCATACCAAGCAGAGCATGGATATGAG...GACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGTGGGGCTCATATCCATaGTCTGCTTGGTATGCCCTC +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMWGSYP*SAWYAL
Trigger: GAGGGCATACCAAGCAGAGCATGGATATGAGCCCCA...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGTATAGAATCCATCTCTaGTTCCCGCTGGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMYRIHL*FPLGLL
Trigger: AAGCAGGCCCAGCGGGAAGCAGAGATGGATTCTATA...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGAGTATAGCCTGCCTCTaGCAGGTACTGGGTGATCTG +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMSIACL*QVLGDL
Trigger: CAGATCACCCAGTACCTGGCAGAGGCAGGCTATACT...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCACTGTTTCTGGGCTGGTaGAATCCTCAAATCGAATGG +
Preference number: 4 (lower is better)
Translates to: HSFSKQSWGIRPLWVCHALFLGW*NPQIEW
Trigger: CCATTCGATTTGAGGATTGCACCAGCCCAGAAACAG...TGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCGCCAGCTCTCTGCTTTaGTTGAGCCTGAGAAATAGG +
Preference number: 4 (lower is better)
Translates to: QSWGIRPLWVCHASVTHVASSLL*LSLRNR
Trigger: CCTATTTCTCAGGCTCAAGCAAAGCAGAGAGCTGGC...GACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCACAAGGGAGAGGTGAGTaGGTCTGTCTGGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: HGTRVSWFIPSASRAGVSQGRGE*VCLGSA
Trigger: TGCGGAACCCAGACAGACCCACTCACCTCTCCCTTG...TGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGGCCTCTGCCAGGTACTaGGTGATCTGTGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMASARY*VICVVF
Trigger: GAAGACAACACAGATCACCCAGTACCTGGCAGAGGC...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATTTTGCACAGCATTaGCTCCAGAGGGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMHFAQH*LQRELC
Trigger: GCAGAGTTCCCTCTGGAGCCAATGCTGTGCAAAATG...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCTGCACTCGGACTGTaGATTTGCCACAGGAGACCA +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLSALGL*ICHRRP
Trigger: TGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGA...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTCCAGATCCTTGTCGTTaGTGCCCAAGTGATTGTCCA +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLPDPCR*CPSDCP
Trigger: TGGACAATCACTTGGGCATCAACGACAAGGATCTGG...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGATTGTCCAGCTCCGTaGAAACCTTCGACACCAAAG +
Preference number: 4 (lower is better)
Translates to: HECHGSFLQQAELGYQALDCPAP*KPSTPK
Trigger: CTTTGGTGTCGAAGGTTTGCACGGAGCTGGACAATC...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCGGCTTTCTTCTGATCTaGAAGGGCCTGTTTATCCTT +
Preference number: 4 (lower is better)
Translates to: SFLQQAELGYQALVGLPCGFLLI*KGLFIL
Trigger: AAGGATAAACAGGCCCTTGCAGATCAGAAGAAAGCC...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCTGTGCCTGTCCATTATaGCTAACATCTGCTTCCGAA +
Preference number: 4 (lower is better)
Translates to: WFIPSASRAGVSGPCGSACACPL*LTSASE
Trigger: TTCGGAAGCAGATGTTAGGCATAATGGACAGGCACA...GGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGTGTAAATATCTCCAATaGCAGGCTCTTCCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMCKYLQ*QALPGE
Trigger: CTCCCCCGGAAGAGCCTGCCATTGGAGATATTTACA...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCACAATCCCCCTCATGTTaGCAGCGATCTGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: HGTRVSWFIPSASRAGVSQSPSC*QRSACL
Trigger: AAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTG...TGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTAAGGGCAGAGTACACTaGGAGGATGATCAACTCTGG +
Preference number: 4 (lower is better)
Translates to: HECHGSFLQQAELGYQALKGRVH*EDDQLW
Trigger: CCAGAGTTGATCATCCTCCCAGTGTACTCTGCCCTT...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTGGTCCCCTTCTGTCTaGTGGAATTTGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMWSPSV*WNLAFF
Trigger: GAAGAAAGCCAAATTCCACCAGACAGAAGGGGACCA...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGTCTTTGAAGGGACTCTaGCTTCTGCTCCTAGATCTG +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMSLKGL*LLLLDL
Trigger: CAGATCTAGGAGCAGAAGTCAGAGTCCCTTCAAAGA...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCATAATGATGGCATACTaGGTGAGATCGGGGTCAATC +
Preference number: 4 (lower is better)
Translates to: QSWGIRPLWVCHASVTHVIMMAY*VRSGSI
Trigger: GATTGACCCCGATCTCACTCAGTATGCCATCATTAT...GACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTTCGACCTGGGATTGTaGAGATGGGTGCTTCATAGA +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLFDLGL*RWVLHR
Trigger: TCTATGAAGCACCCATCTTCACAATCCCAGGTCGAA...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TCAGTCACCACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGCTTAGGCCTTCCAGCTaGACAAAGCAACCGAACTGC +
Preference number: 4 (lower is better)
Translates to: SVTTGLACHQSQEAMIQELRPSS*TKQPNC
Trigger: GCAGTTCGGTTGCTTTGTGCAGCTGGAAGGCCTAAG...CTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTGGTGACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp GTAGACCAGGCTGCCCTTGAACTCAGAGATCTTCCGGCCTCTGCATCCCAAGCGGAATTGTACACTTTCTaGTTCACAAATCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VDQAALELRDLPASASQAELYTF*FTNPGS
Trigger: TGACCCTGGATTTGTGAAGCAGAAAGTGTACAATTC...CGCTTGGGATGCAGAGGCCGGAAGATCTCTGAGTTCAAGGGCAGCCTGGTCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGAGGCAAGTAGAGGCTCCAGGCGCTaGTGTTTCTTCTGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: HRTSLSSVTGSHDTGEASRGSRR*CFFCLL
Trigger: AAGCAAGCAGAAGAAACAGCAGCGCCTGGAGCCTCT...ACTTGCCTCTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTCTTCATCATCCACCTTaGGGAGAATGCCAGTCTCTT +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLLHHPP*GECQSL
Trigger: AAGAGACTGGCATTCTCCCCAAGGTGGATGATGAAG...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTCCCGTCTTTCCTTaGCCAGGGCACTCTGCATCA +
Preference number: 4 (lower is better)
Translates to: SLAFPRMHTLSDCSFVCVAPVFP*PGHSAS
Trigger: TGATGCAGAGTGCCCTGGCCAAGGAAAGACGGGAGC...CACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAACCCAATCTTGCCCCTaGAAGTATAGCCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: HGTRVSWFIPSASRAGVSTQSCP*KYSLPL
Trigger: CAGAGGCAGGCTATACTTCCAGGGGCAAGATTGGGT...TGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGGTACAGAATTTCCACTaGATAGGTTCGACCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMVQNFH*IGSTWD
Trigger: ATCCCAGGTCGAACCTATCCAGTGGAAATTCTGTAC...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGAGGATGATCAACTCTaGGACATCAGGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: HGTRVSWFIPSASRAGVSEDDQL*DIRSQG
Trigger: TCCCTGGGACCTGATGTCCCAGAGTTGATCATCCTC...TGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCCTGTCTGGTGGAATTTaGCTTTCTTCTGATCTGCAA +
Preference number: 4 (lower is better)
Translates to: SFLQQAELGYQALVGLPCLSGGI*LSSDLQ
Trigger: TTGCAGATCAGAAGAAAGCCAAATTCCACCAGACAG...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTGCCAGCAGGGTGAGGTaGTCCCCTTCTGTCTGGTGG +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESASRVR*SPSVWW
Trigger: CCACCAGACAGAAGGGGACCACCTCACCCTGCTGGC...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGCCGGTAGCCTTCCTGTaGGTCCTTCTTGGCAGCGTT +
Preference number: 4 (lower is better)
Translates to: SLAFPRMHTLSDCSFVCVPVAFL*VLLGSV
Trigger: AACGCTGCCAAGAAGGACCCACAGGAAGGCTACCGG...CACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGGCATGTATTCCTTTGTaGTCAGCACAAGTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMACIPL*SAQVRG
Trigger: ACCACGAACTTGTGCTGACCACAAAGGAATACATGC...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAACATGGTCCGAGCTaGAGGGTTGTCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESQHGPS*RVVRLA
Trigger: TGCCAGCCGGACAACCCTTCAGCTCGGACCATGTTG...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTACAACCAAACTCTTCTaGGACTCTTTTGGCCACAGA +
Preference number: 4 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLTTKLF*DSFGHR
Trigger: TCTGTGGCCAAAAGAGTCTCAGAAGAGTTTGGTTGT...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTCGCATCCAGCGTGGCTaGGGTGACAATCAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: CISYSCPLPFPGCTPYLIRIQRG*GDNQLH
Trigger: ATGAAGCTGATTGTCACCTCAGCCACGCTGGATGCG...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGAATTTGGCTTTCTTCTaGTCTGCAAGGGCCTGTTTA +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMNLAFF*SARACL
Trigger: TAAACAGGCCCTTGCAGATCAGAAGAAAGCCAAATT...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTATTCGGGCTGTCTGTTaGAGAGAGCACTGGAGGGGT +
Preference number: 4 (lower is better)
Translates to: CISYSCPLPFPGCTPYLIIRAVC*REHWRG
Trigger: ACCCCTCCAGTGCTCTCTTCAACAGACAGCCCGAAT...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGAGAATCTGTGAATTCTaGACCATTTTTGACCAGAGA +
Preference number: 4 (lower is better)
Translates to: PSASRAGVSGPCGSAMHQRICEF*TIFDQR
Trigger: TCTCTGGTCAAAAATGGTGCAGAATTCACAGATTCT...CTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTCATAAGAAGCTTTGTTaGCCCCAAAGGCATGCTTCT +
Preference number: 4 (lower is better)
Translates to: HECHGSFLQQAELGYQALHKKLC*PQRHAS
Trigger: AGAAGCATGCCTTTGGGGGCAACAAAGCTTCTTATG...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTCCTGGAAGTATAGCCTaGCTCTGCCAGGTACTGGGT +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAPGSIA*LCQVLG
Trigger: ACCCAGTACCTGGCAGAGGCAGGCTATACTTCCAGG...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCAATGGTCCTCTCGTGTaGTTCATCCAACATAATGAT +
Preference number: 4 (lower is better)
Translates to: WFIPSASRAGVSGPCGSANGPLV*FIQHND
Trigger: ATCATTATGTTGGATGAAGCACACGAGAGGACCATT...GGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTTGACCTTGACTCTCTaGCCTTTACTCACAACATCA +
Preference number: 4 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMLTLTL*PLLTTS
Trigger: TGATGTTGTGAGTAAAGGCCAGAGAGTCAAGGTCAA...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TCAGTCACCACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGCCTTCAGTTTGTAGATaGGCAGGCTCTCTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVTTGLACHQSQEAMIQEPSVCR*AGSLSA
Trigger: AGCAGAGAGAGAGCCTGCCCATCTACAAACTGAAGG...CTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTGGTGACTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTGCTACCAGGGGGAGCTaGATCAAAGATTCGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAATRGS*IKDSGL
Trigger: CAGACCCGAATCTTTGATCCAGCTCCCCCTGGTAGC...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTTCTGTAACACTTTCCTaGGCCAGTTCTCCCAGCCCG +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVASVTLS*ASSPSP
Trigger: CGGGCTGGGAGAACTGGCCCAGGAAAGTGTTACAGA...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGGCAGGCTCTCTCTCTaGTCAAGGATTGACATCTGG +
Preference number: 4 (lower is better)
Translates to: SLAFPRMHTLSDCSFVCVGRLSL*SRIDIW
Trigger: CCAGATGTCAATCCTTGAGCAGAGAGAGAGCCTGCC...CACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTTTGTCATGCACAGCCTaGACCAGCTGCTCCTTCAGT +
Preference number: 4 (lower is better)
Translates to: CISYSCPLPFPGCTPYLILSCTA*TSCSFS
Trigger: ACTGAAGGAGCAGCTGGTGCAGGCTGTGCATGACAA...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGAGGCAAGTCAACCACATAGTAGATaGCGTCGATGGTCAGAGATG +
Preference number: 4 (lower is better)
Translates to: HRTSLSSVTGSHDTGEASQPHSR*RRWSEM
Trigger: CATCTCTGACCATCGACGGCATCTACTATGTGGTTG...ACTTGCCTCTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGATGTTTCTGCAATGTTaGTGGCAATCACCACCTTTC +
Preference number: 4 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMMFLQC*WQSPPF
Trigger: GAAAGGTGGTGATTGCCACCAACATTGCAGAAACAT...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGAGGCAAGTTTTCCGGTACATTGGTaGTCAGCATTTCATCGCGGT +
Preference number: 4 (lower is better)
Translates to: HRTSLSSVTGSHDTGEASFPVHW*SAFHRG
Trigger: ACCGCGATGAAATGCTGACCACCAATGTACCGGAAA...ACTTGCCTCTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TCAGTCACCACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGCAGAGTTTCCATCGGTaGGGCATCCATGAAGTCAAA +
Preference number: 4 (lower is better)
Translates to: SVTTGLACHQSQEAMIQEQSFHR*GIHEVK
Trigger: TTTGACTTCATGGATGCCCCACCGATGGAAACTCTG...CTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTGGTGACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTAGTACACTGGGAGGATaGTCAACTCTGGGACATCAG +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVASTLGG*STLGHQ
Trigger: CTGATGTCCCAGAGTTGATCATCCTCCCAGTGTACT...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGTCAAAGATTCGGGTCTaGATCTCACTCGGAAGGGCA +
Preference number: 4 (lower is better)
Translates to: SLAFPRMHTLSDCSFVCVSKIRV*ISLGRA
Trigger: TGCCCTTCCGAGTGAGATGCAGACCCGAATCTTTGA...CACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp TCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGTCGCTGCAGCCCAGATaGACAGACATGATGAGCATT +
Preference number: 4 (lower is better)
Translates to: SLAFPRMHTLSDCSFVCVSLQPR*TDMMSI
Trigger: AATGCTCATCATGTCTGTGCATCTGGGCTGCAGCGA...CACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCTCGGACTGTGGATTTaGCACAGGAGACCACGTCCA +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESLGLWI*HRRPRP
Trigger: TGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAG...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGGAAGGGTTGTCCGGCTaGCAGAGGACGGGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: PCLNVSILHYEESQASKMEGLSG*QRTGKS
Trigger: ACTCTTCCCCGTCCTCTGCCAGCCGGACAACCCTTC...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTTCTCTTTGTTTCTCTTaGCCTGCTGCGCTGGGCATT +
Preference number: 4 (lower is better)
Translates to: CISYSCPLPFPGCTPYLISLCFS*PAALGI
Trigger: AATGCCCAGCGCAGCAGGCCAAGAGAAACAAAGAGA...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CATGGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAAATCCTCAAATCGAATaGTGTAGCCCACCTCTTGAC +
Preference number: 4 (lower is better)
Translates to: HGTRVSWFIPSASRAGVSNPQIE*CSPPLD
Trigger: GTCAAGAGGTGGGCTACACCATTCGATTTGAGGATT...TGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTAGAGCACTGGAGGGGTaGATATACACCACCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESRALEG*IYTTCW
Trigger: CCAGCAGGTGGTGTATATCCACCCCTCCAGTGCTCT...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTCAGCAATCATCTGTTTaGTCTCCCACTTCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAQQSSV*SPTSLG
Trigger: ACCCAGAGAAGTGGGAGATCAAACAGATGATTGCTG...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGCGGTGTCTCCGCTTATaGTCTCTCTCTCTATCTCGC +
Preference number: 4 (lower is better)
Translates to: LWPKPCLNVSILHYEESQRCLRL*SLSLSR
Trigger: GCGAGATAGAGAGAGAGACCATAAGCGGAGACACCG...CTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGGGGCACTCTGCATCATaGCTGCTTGGGAGAGTGAGC +
Preference number: 4 (lower is better)
Translates to: PCLNVSILHYEESQASKMGHSAS*LLGRVS
Trigger: GCTCACTCTCCCAAGCAGCCATGATGCAGAGTGCCC...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTGCACATCTGTGTGAATaGTCCTCTCGTGTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAAHLCE*SSRVLH
Trigger: ATGAAGCACACGAGAGGACCATTCACACAGATGTGC...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR TCA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGGGCTGCTTGGGAGAGTaGGCCATCTGGGTTCTTAAC +
Preference number: 4 (lower is better)
Translates to: PCLNVSILHYEESQASKMGCLGE*AIWVLN
Trigger: GTTAAGAACCCAGATGGCTCACTCTCCCAAGCAGCC...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTTTGCCCCCAAAGGCATaGTTCTTCCACTCAGGAATG +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESLPPKA*FFHSGM
Trigger: CATTCCTGAGTGGAAGAAGCATGCCTTTGGGGGCAA...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTATTATGCCTAACATCTaGTTCCGAATGTCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAIMPNI*FRMSWA
Trigger: TGCCCAGGACATTCGGAAGCAGATGTTAGGCATAAT...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGTATCCATGCTCTGCTTaGTATGCCCTCTCAGGAACG +
Preference number: 4 (lower is better)
Translates to: LWPKPCLNVSILHYEESQYPCSA*YALSGT
Trigger: CGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATA...CTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTCTTGATGACTGTTTCTaGGCTGGTGCAATCCTCAAA +
Preference number: 4 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVALDDCF*AGAILK
Trigger: TTTGAGGATTGCACCAGCCCAGAAACAGTCATCAAG...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
3UTR CAA 72 bp AATGCTCAGTTTAAGATCAGTCACCACAGGACTAGCTaGTCATCAGTCACAGGAAGCCATGATACAGGAGAG +
Preference number: 4 (lower is better)
Translates to: NAQFKISHHRTS*SSVTGSHDTGE
Trigger: CTCTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTGGTGACTGATCTTAAACTGAGCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGCAATCACCACCTTTCTaGTACCAGGGGGAGCTGGAT +
Preference number: 4 (lower is better)
Translates to: PCLNVSILHYEESQASKMQSPPF*YQGELD
Trigger: ATCCAGCTCCCCCTGGTAGCAGAAAGGTGGTGATTG...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGCCCAGTGTATACAGCTaGTCCATGGCCGTGATCAGA +
Preference number: 4 (lower is better)
Translates to: PCLNVSILHYEESQASKMPSVYS*SMAVIR
Trigger: TCTGATCACGGCCATGGAGCAGCTGTATACACTGGG...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTGCTGTTTCTTCTGCTTaGTTAGCTTGGTTGGGTCAG +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESAVSSA*LAWLGQ
Trigger: CTGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGC...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp CTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGAGTAGATGCCGTCGATaGTCAGAGATGTTTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LWPKPCLNVSILHYEESQSRCRR*SEMFLQ
Trigger: TTGCAGAAACATCTCTGACCATCGACGGCATCTACT...CTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGACAAAGCAACCGAACTaGATGATACTGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: LWPKPCLNVSILHYEESQTKQPN*MILVTL
Trigger: CAAAGTGACCAGTATCATGCAGTTCGGTTGCTTTGT...CTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CCA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCTCTTCGTCGAAGTCTaGAAACTCTTCTTTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RLWPKPCLNVSILHYEESLFVEV*KLFFGK
Trigger: CTTTCCAAAGAAGAGTTTCCAGACTTCGACGAAGAG...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR GCA 90 bp CTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGATTGTGAAGATGGGTaGTTCATAGAAGTACTGAGA +
Preference number: 4 (lower is better)
Translates to: LWPKPCLNVSILHYEESQDCEDG*FIEVLR
Trigger: TCTCAGTACTTCTATGAAGCACCCATCTTCACAATC...CTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS GCA 90 bp CGAGTGAGCAGGCCCTCGTCGTCCAGGGCCCCCAGTGTATACAGCTaGTCCATGGCCGTGATCAGAGTTTCCATCGGTGGGGCATCCATG +
Preference number: 5 (lower is better)
Translates to: RVSRPSSSRAPSVYS*SMAVIRVSIGGASM
Trigger: CATGGATGCCCCACCGATGGAAACTCTGATCACGGCCATGGAGCAGCTGTATACACTGGGGGCCCTGGACGACGAGGGCCTGCTCACTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp TCAGCCACATTGGCCACTCGACCTTCCCGTCGGAGCTCAGAGATGTaGACCAGGCCTTCCCACCGCTTCCTTAGGCCTTCCAGCTGCACA +
Preference number: 5 (lower is better)
Translates to: SATLATRPSRRSSEM*TRPSHRFLRPSSCT
Trigger: TGTGCAGCTGGAAGGCCTAAGGAAGCGGTGGGAAGGCCTGGTGCACATCTCTGAGCTCCGACGGGAAGGTCGAGTGGCCAATGTGGCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp CCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGAGCTCCCGTCTTTCCTaGGCCAGGGCACTCTGCATC +
Preference number: 5 (lower is better)
Translates to: PSASRAGVSGPCGSAMHQSSRLS*ARALCI
Trigger: GATGCAGAGTGCCCTGGCCAAGGAAAGACGGGAGCT...CTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 90 bp TCCACTCAGGAATGTCGTTGGGCATCATCCCAATCCCCCTCATGTTaGCAGCGATCTGCCTGCCTTCCGCATCGGGCAAGGGATCAACCC +
Preference number: 5 (lower is better)
Translates to: STQECRWASSQSPSC*QRSACLPHRARDQP
Trigger: GGGTTGATCCCTTGCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTGGGATGATGCCCAACGACATTCCTGAGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp TTCATCGCGGTAGGCACGCTCCGTGTACAGTCTGTAACACTTTCCTaGGCCAGTTCTCCCAGCCCGGCCAGCTCTCTGCTTTGCTTGAGC +
Preference number: 5 (lower is better)
Translates to: FIAVGTLRVQSVTLS*ASSPSPASSLLCLS
Trigger: GCTCAAGCAAAGCAGAGAGCTGGCCGGGCTGGGAGAACTGGCCCAGGAAAGTGTTACAGACTGTACACGGAGCGTGCCTACCGCGATGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp CCTGTGGGTCCTTCTTGGCAGCGTTCCGGAAGAACCCACTGCAGATaGCCTTCTGCACTCGGACTGTGGATTTGCCACAGGAGACCACGT +
Preference number: 5 (lower is better)
Translates to: PVGPSWQRSGRTHCR*PSALGLWICHRRPR
Trigger: ACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp CCTGCTGGTCTATCAGAGTCCGGTAGCCTTCCTGTGGGTCCTTCTTaGCAGCGTTCCGGAAGAACCCACTGCAGATGGCCTTCTGCACTC +
Preference number: 5 (lower is better)
Translates to: PAGLSESGSLPVGPS*QRSGRTHCRWPSAL
Trigger: GAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGGAAGGCTACCGGACTCTGATAGACCAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp TTGAGCCCCATGGGTATAGAATCCATCTCTGCTTCCCGCTGGGCCTaGTTCAGCTCCCGTCTTTCCTTGGCCAGGGCACTCTGCATCATG +
Preference number: 5 (lower is better)
Translates to: LSPMGIESISASRWA*FSSRLSLARALCIM
Trigger: CATGATGCAGAGTGCCCTGGCCAAGGAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGCAGAGATGGATTCTATACCCATGGGGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp TCCTTCTTGGCAGCGTTCCGGAAGAACCCACTGCAGATGGCCTTCTaGACTCGGACTGTGGATTTGCCACAGGAGACCACGTCCAGCTTG +
Preference number: 5 (lower is better)
Translates to: SFLAAFRKNPLQMAF*TRTVDLPQETTSSL
Trigger: CAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACGCTGCCAAGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp AGCCTTCCTGTGGGTCCTTCTTGGCAGCGTTCCGGAAGAACCCACTaGAGATGGCCTTCTGCACTCGGACTGTGGATTTGCCACAGGAGA +
Preference number: 5 (lower is better)
Translates to: SLPVGPSWQRSGRTH*RWPSALGLWICHRR
Trigger: TCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGGAAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp TGTTTGTTGAGCCCCATGGGTATAGAATCCATCTCTGCTTCCCGCTaGGCCTGCTTCAGCTCCCGTCTTTCCTTGGCCAGGGCACTCTGC +
Preference number: 5 (lower is better)
Translates to: CLLSPMGIESISASR*ACFSSRLSLARALC
Trigger: GCAGAGTGCCCTGGCCAAGGAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGCAGAGATGGATTCTATACCCATGGGGCTCAACAAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp GGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCATTCGGGTGAGCCGCTaGCGCTCCAGCGAGTCATCC +
Preference number: 5 (lower is better)
Translates to: GTRVSWFIPSASRAGVSGIRVSR*RSSESS
Trigger: GGATGACTCGCTGGAGCGCAAGCGGCTCACCCGAAT...GCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 90 bp CGTTCCGGAAGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTaGATTTGCCACAGGAGACCACGTCCAGCTTGTGCCTGTCCATTA +
Preference number: 5 (lower is better)
Translates to: RSGRTHCRWPSALGL*ICHRRPRPACACPL
Trigger: TAATGGACAGGCACAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp GATATACACCACCTGCTGGTCTATCAGAGTCCGGTAGCCTTCCTGTaGGTCCTTCTTGGCAGCGTTCCGGAAGAACCCACTGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: DIHHLLVYQSPVAFL*VLLGSVPEEPTADG
Trigger: GCCATCTGCAGTGGGTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGGAAGGCTACCGGACTCTGATAGACCAGCAGGTGGTGTATATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 90 bp TCCAGCGAGTCATCCTCTACTTCAGGAGCGCTGACAAGGGAGAGGTaGGTGGGTCTGTCTGGGTTCCGCATTGACGTCTCTTCATTGGTC +
Preference number: 5 (lower is better)
Translates to: SSESSSTSGALTRER*VGLSGFRIDVSSLV
Trigger: GACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCACTCACCTCTCCCTTGTCAGCGCTCCTGAAGTAGAGGATGACTCGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 90 bp AGAAAGCCGGAGCAAACTCCACAAGCCACCGGGGGTCGATGGTGGTaGCCTCACGCATGTATTCCTTTGTGGTCAGCACAAGTTCGTGGT +
Preference number: 5 (lower is better)
Translates to: RKPEQTPQATGGRWW*PHACIPLWSAQVRG
Trigger: ACCACGAACTTGTGCTGACCACAAAGGAATACATGCGTGAGGTCACCACCATCGACCCCCGGTGGCTTGTGGAGTTTGCTCCGGCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp GGAAGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTGGATTTaGCACAGGAGACCACGTCCAGCTTGTGCCTGTCCATTATGCCTA +
Preference number: 5 (lower is better)
Translates to: GRTHCRWPSALGLWI*HRRPRPACACPLCL
Trigger: TAGGCATAATGGACAGGCACAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp AGCTCCCGTCTTTCCTTGGCCAGGGCACTCTGCATCATGGCTGCTTaGGAGAGTGAGCCATCTGGGTTCTTAACGATTTTGATGGGGCTC +
Preference number: 5 (lower is better)
Translates to: SSRLSLARALCIMAA*ESEPSGFLTILMGL
Trigger: GAGCCCCATCAAAATCGTTAAGAACCCAGATGGCTCACTCTCCCAAGCAGCCATGATGCAGAGTGCCCTGGCCAAGGAAAGACGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp GCACTGTGCTGGCCAGGTTGGTTCTCTGGATTTCCGGTACATTGGTaGTCAGCATTTCATCGCGGTAGGCACGCTCCGTGTACAGTCTGT +
Preference number: 5 (lower is better)
Translates to: ALCWPGWFSGFPVHW*SAFHRGRHAPCTVC
Trigger: ACAGACTGTACACGGAGCGTGCCTACCGCGATGAAATGCTGACCACCAATGTACCGGAAATCCAGAGAACCAACCTGGCCAGCACAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp ACAGCACTGTGCTGGCCAGGTTGGTTCTCTGGATTTCCGGTACATTaGTGGTCAGCATTTCATCGCGGTAGGCACGCTCCGTGTACAGTC +
Preference number: 5 (lower is better)
Translates to: TALCWPGWFSGFPVH*WSAFHRGRHAPCTV
Trigger: GACTGTACACGGAGCGTGCCTACCGCGATGAAATGCTGACCACCAATGTACCGGAAATCCAGAGAACCAACCTGGCCAGCACAGTGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGGTCTCTTTGTTTCTCTaGGCCTGCTGCGCTGGGCAT +
Preference number: 5 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMVSLFL*ACCAGH
Trigger: ATGCCCAGCGCAGCAGGCCAAGAGAAACAAAGAGAC...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGGTGCTCAGGGTCTCTTaGTTTCTCTTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMVLRVS*FLLACC
Trigger: GCAGCAGGCCAAGAGAAACAAAGAGACCCTGAGCAC...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp GTAGACCAGGCTGCCCTTGAACTCAGAGATCTTCCGGCCTCTGCATCCCAAGCGGTCTTCTCCTGTCTCTaGGTCCACATCCTTCATGCT +
Preference number: 5 (lower is better)
Translates to: VDQAALELRDLPASASQAVFSCL*VHILHA
Trigger: AGCATGAAGGATGTGGACCAAGAGACAGGAGAAGAC...CGCTTGGGATGCAGAGGCCGGAAGATCTCTGAGTTCAAGGGCAGCCTGGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp GTAGACCAGGCTGCCCTTGAACTCAGAGATCTTCCGGCCTCTGCATCCCAAGCGTCTTCTGAGACTCTTTaGGCCACAGACATAGCTGCC +
Preference number: 5 (lower is better)
Translates to: VDQAALELRDLPASASQASSETL*ATDIAA
Trigger: GGCAGCTATGTCTGTGGCCAAAAGAGTCTCAGAAGA...CGCTTGGGATGCAGAGGCCGGAAGATCTCTGAGTTCAAGGGCAGCCTGGTCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACTCGGACTGTGGATTaGCCACAGGAGACCACGTCC +
Preference number: 5 (lower is better)
Translates to: LVGLPCISYSCPLPFPGCTRTVD*PQETTS
Trigger: GGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGT...GCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTTCCTGTGGGTCCTTCTaGGCAGCGTTCCGGAAGAAC +
Preference number: 5 (lower is better)
Translates to: HECHGSFLQQAELGYQALSCGSF*AAFRKN
Trigger: GTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGGA...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp AGCGCTGACAAGGGAGAGGTGAGTGGGTCTGTCTGGGTTCCGCATTaGCGTCTCTTCATTGGTCTCGCCAACCAGATTTCTCCGTCTGTT +
Preference number: 5 (lower is better)
Translates to: SADKGEVSGSVWVPH*RLFIGLANQISPSV
Trigger: AACAGACGGAGAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCACTCACCTCTCCCTTGTCAGCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp ACCACCTTTCTGCTACCAGGGGGAGCTGGATCAAAGATTCGGGTCTaGATCTCACTCGGAAGGGCAGAGTACACTGGGAGGATGATCAAC +
Preference number: 5 (lower is better)
Translates to: TTFLLPGGAGSKIRV*ISLGRAEYTGRMIN
Trigger: GTTGATCATCCTCCCAGTGTACTCTGCCCTTCCGAGTGAGATGCAGACCCGAATCTTTGATCCAGCTCCCCCTGGTAGCAGAAAGGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCTCTTCATCATCCACCTaGGGGAGAATGCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: SFLQQAELGYQALVGLPCSSSST*GRMPVS
Trigger: AGAGACTGGCATTCTCCCCAAGGTGGATGATGAAGA...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTCACTCAGGAATGTCGTaGGGCATCATCCCAATCCCC +
Preference number: 5 (lower is better)
Translates to: HECHGSFLQQAELGYQALHSGMS*GIIPIP
Trigger: GGGGATTGGGATGATGCCCAACGACATTCCTGAGTG...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp ACAGAGGCTGGGGAGTGGGTAGAGAGTGGGGCTGACATGGAACACGAGTGTCATCTCTCTGCTCAAGGATaGACATCTGGGTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: TEAGEWVESGADMEHECHLSAQG*TSGSSS
Trigger: GGAAGAAGACCCAGATGTCAATCCTTGAGCAGAGAG...ATGACACTCGTGTTCCATGTCAGCCCCACTCTCTACCCACTCCCCAGCCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTACTGTGCTGGCCAGGTaGGTTCTCTGGATTTCCGGT +
Preference number: 5 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLTVLAR*VLWISG
Trigger: ACCGGAAATCCAGAGAACCAACCTGGCCAGCACAGT...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp TGGTCAGCACAAGTTCGTGGTATACCACCCATTCGGGCTGTCTGTTaGAGAGAGCACTGGAGGGGTGGATATACACCACCTGCTGGTCTA +
Preference number: 5 (lower is better)
Translates to: WSAQVRGIPPIRAVC*REHWRGGYTPPAGL
Trigger: TAGACCAGCAGGTGGTGTATATCCACCCCTCCAGTGCTCTCTTCAACAGACAGCCCGAATGGGTGGTATACCACGAACTTGTGCTGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 90 bp GCTGCTGTTTCTTCTGCTTGCTTAGCTTGGTTGGGTCAGAAACTTTaGAGAAAGCCGGAGCAAACTCCACAAGCCACCGGGGGTCGATGG +
Preference number: 5 (lower is better)
Translates to: AAVSSACLAWLGQKL*RKPEQTPQATGGRW
Trigger: CCATCGACCCCCGGTGGCTTGTGGAGTTTGCTCCGGCTTTCTTCAAAGTTTCTGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp TGTCCCTGTGCTCAGGGTCTCTTTGTTTCTCTTGGCCTGCTGCGCTaGGCATTAAAGCTTCCAGCTCTTTCAAGACGTCCACAGCGACTT +
Preference number: 5 (lower is better)
Translates to: CPCAQGLFVSLGLLR*ALKLPALSRRPQRL
Trigger: AAGTCGCTGTGGACGTCTTGAAAGAGCTGGAAGCTTTAATGCCCAGCGCAGCAGGCCAAGAGAAACAAAGAGACCCTGAGCACAGGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp TGCAATGTTGGTGGCAATCACCACCTTTCTGCTACCAGGGGGAGCTaGATCAAAGATTCGGGTCTGCATCTCACTCGGAAGGGCAGAGTA +
Preference number: 5 (lower is better)
Translates to: CNVGGNHHLSATRGS*IKDSGLHLTRKGRV
Trigger: TACTCTGCCCTTCCGAGTGAGATGCAGACCCGAATCTTTGATCCAGCTCCCCCTGGTAGCAGAAAGGTGGTGATTGCCACCAACATTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCCCATCTGTCATGTACTaGATGACTGTTTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: SFLQQAELGYQALVGLPCPSVMY*MTVSGL
Trigger: CAGCCCAGAAACAGTCATCAAGTACATGACAGATGG...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTTTAATACCCATGGCCTaGAGGGACAGCACTGTGCTG +
Preference number: 5 (lower is better)
Translates to: HECHGSFLQQAELGYQALLIPMA*RDSTVL
Trigger: CAGCACAGTGCTGTCCCTCAAGGCCATGGGTATTAA...AAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp ACAGAGGCTGGGGAGTGGGTAGAGAGTGGGGCTGACATGGAACACGAGTGTCATGACATGATGAGCATTTaGCACAGCATTGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TEAGEWVESGADMEHECHDMMSI*HSIGSR
Trigger: TCTGGAGCCAATGCTGTGCAAAATGCTCATCATGTC...ATGACACTCGTGTTCCATGTCAGCCCCACTCTCTACCCACTCCCCAGCCTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CACAGGACTAGCTTGTCATCAGTCACAGGAAGCCATGATACAGGAGAGGCAAGTCATTCGGGCTGTCTGTaGAAGAGAGCACTGGAGGGG +
Preference number: 5 (lower is better)
Translates to: HRTSLSSVTGSHDTGEASHSGCL*KRALEG
Trigger: CCCCTCCAGTGCTCTCTTCAACAGACAGCCCGAATG...ACTTGCCTCTCCTGTATCATGGCTTCCTGTGACTGATGACAAGCTAGTCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp TTCGGGTCTGCATCTCACTCGGAAGGGCAGAGTACACTGGGAGGATaGTCAACTCTGGGACATCAGGTCCCAGGGACTTCATTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: FGSASHSEGQSTLGG*STLGHQVPGTSFFH
Trigger: ATGAAAGAATGAAGTCCCTGGGACCTGATGTCCCAGAGTTGATCATCCTCCCAGTGTACTCTGCCCTTCCGAGTGAGATGCAGACCCGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp AGGGTCAACCACATAGTAGATGCCGTCGATGGTCAGAGATGTTTCTaGAATGTTGGTGGCAATCACCACCTTTCTGCTACCAGGGGGAGC +
Preference number: 5 (lower is better)
Translates to: RVNHIVDAVDGQRCF*NVGGNHHLSATRGS
Trigger: GCTCCCCCTGGTAGCAGAAAGGTGGTGATTGCCACCAACATTGCAGAAACATCTCTGACCATCGACGGCATCTACTATGTGGTTGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp GAGGTGGTCCCCTTCTGTCTGGTGGAATTTGGCTTTCTTCTGATCTaGAAGGGCCTGTTTATCCTTGGGTCGGTAGAAGACGTTCTGCAC +
Preference number: 5 (lower is better)
Translates to: EVVPFCLVEFGFLLI*KGLFILGSVEDVLH
Trigger: GTGCAGAACGTCTTCTACCGACCCAAGGATAAACAGGCCCTTGCAGATCAGAAGAAAGCCAAATTCCACCAGACAGAAGGGGACCACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp CGGGTTCTAGAATGTGACCGAGAGCGTGATCGGTGTCTCCGCTTATaGTCTCTCTCTCTATCTCGCTCTCTGTCTCGTTCTCGATCTCTA +
Preference number: 5 (lower is better)
Translates to: RVLECDRERDRCLRL*SLSLSRSLSRSRSL
Trigger: TAGAGATCGAGAACGAGACAGAGAGCGAGATAGAGAGAGAGACCATAAGCGGAGACACCGATCACGCTCTCGGTCACATTCTAGAACCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp GATTGTCATGCACAGCCTGCACCAGCTGCTCCTTCAGTTTGTAGATaGGCAGGCTCTCTCTCTGCTCAAGGATTGACATCTGGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: DCHAQPAPAAPSVCR*AGSLSAQGLTSGSS
Trigger: AGAAGACCCAGATGTCAATCCTTGAGCAGAGAGAGAGCCTGCCCATCTACAAACTGAAGGAGCAGCTGGTGCAGGCTGTGCATGACAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp AGTGTCGATCTCTTCCTGACCAGTCAAGAAAACCAAGATGTCACCTaGCGGCTCTGTCAGATGGATCTGCATGACCGTGATCAGGCTAGC +
Preference number: 5 (lower is better)
Translates to: SVDLFLTSQENQDVT*RLCQMDLHDRDQAS
Trigger: GCTAGCCTGATCACGGTCATGCAGATCCATCTGACAGAGCCGCCAGGTGACATCTTGGTTTTCTTGACTGGTCAGGAAGAGATCGACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp ATCAAAGATTCGGGTCTGCATCTCACTCGGAAGGGCAGAGTACACTaGGAGGATGATCAACTCTGGGACATCAGGTCCCAGGGACTTCAT +
Preference number: 5 (lower is better)
Translates to: IKDSGLHLTRKGRVH*EDDQLWDIRSQGLH
Trigger: ATGAAGTCCCTGGGACCTGATGTCCCAGAGTTGATCATCCTCCCAGTGTACTCTGCCCTTCCGAGTGAGATGCAGACCCGAATCTTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATGAGACGCAGGAGGTaGCTAATAAGAGAATCTGTG +
Preference number: 5 (lower is better)
Translates to: SFLQQAELGYQALVGLPCMRRRR*LIRESV
Trigger: CACAGATTCTCTTATTAGCAACCTCCTGCGTCTCAT...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGGTGAAGGACAGAACTTaGACCTTGACTCTCTGGCCT +
Preference number: 5 (lower is better)
Translates to: PCGSAMHQLLMSLAFPRMVKDRT*TLTLWP
Trigger: AGGCCAGAGAGTCAAGGTCAAAGTTCTGTCCTTCAC...CATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTGTCTGGGTTCCGCATaGACGTCTCTTCATTGGTCT +
Preference number: 5 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLCLGSA*TSLHWS
Trigger: AGACCAATGAAGAGACGTCAATGCGGAACCCAGACA...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACATATCCATGCTCTGCTaGGTATGCCCTCTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: CGSAMHQLLMSLAFPRMHISMLC*VCPLRN
Trigger: GTTCCTGAGAGGGCATACCAAGCAGAGCATGGATAT...GTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCTGTTTCCGGCTCCTTaGTGTACAGAATTTCCACTG +
Preference number: 5 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMLFPAP*CTEFPL
Trigger: CAGTGGAAATTCTGTACACAAAGGAGCCGGAAACAG...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCACGGGTTGGAGAATTaGTTGTTCTTCCAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: FIPSASRAGVSGPCGSAMHGLEN*LFFQEL
Trigger: CAACTCCTGGAAGAACAACAAATTCTCCAACCCGTG...CATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp TCTTTCCTTGGCCAGGGCACTCTGCATCATGGCTGCTTGGGAGAGTaGGCCATCTGGGTTCTTAACGATTTTGATGGGGCTCATATCCAT +
Preference number: 5 (lower is better)
Translates to: SFLGQGTLHHGCLGE*AIWVLNDFDGAHIH
Trigger: ATGGATATGAGCCCCATCAAAATCGTTAAGAACCCAGATGGCTCACTCTCCCAAGCAGCCATGATGCAGAGTGCCCTGGCCAAGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 90 bp AATGGTGTAGCCCACCTCTTGACCAAGGCAACAACCAAACTCTTCTaGGACTCTTTTGGCCACAGACATAGCTGCCACTCTTCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: NGVAHLLTKATTKLF*DSFGHRHSCHSSGL
Trigger: CAGCCCAGAAGAGTGGCAGCTATGTCTGTGGCCAAAAGAGTCTCAGAAGAGTTTGGTTGTTGCCTTGGTCAAGAGGTGGGCTACACCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp CCATCTGGGTTCTTAACGATTTTGATGGGGCTCATATCCATGCTCTaGTTGGTATGCCCTCTCAGGAACGGAGGCTCCTCTTCAACCAGT +
Preference number: 5 (lower is better)
Translates to: PSGFLTILMGLISML*LVCPLRNGGSSSTS
Trigger: ACTGGTTGAAGAGGAGCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATATGAGCCCCATCAAAATCGTTAAGAACCCAGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp AGAGGTGAGTGGGTCTGTCTGGGTTCCGCATTGACGTCTCTTCATTaGTCTCGCCAACCAGATTTCTCCGTCTGTTTGGGTTTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: RGEWVCLGSALTSLH*SRQPDFSVCLGLGL
Trigger: AAGACCTAAACCCAAACAGACGGAGAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCACTCACCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp CATCTCACTCGGAAGGGCAGAGTACACTGGGAGGATGATCAACTCTaGGACATCAGGTCCCAGGGACTTCATTCTTTCATACAGGATCTC +
Preference number: 5 (lower is better)
Translates to: HLTRKGRVHWEDDQL*DIRSQGLHSFIQDL
Trigger: GAGATCCTGTATGAAAGAATGAAGTCCCTGGGACCTGATGTCCCAGAGTTGATCATCCTCCCAGTGTACTCTGCCCTTCCGAGTGAGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTAGCTCTCTGCTTTGCTaGAGCCTGAGAAATAGGTGT +
Preference number: 5 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLSSLLC*SLRNRC
Trigger: ACACCTATTTCTCAGGCTCAAGCAAAGCAGAGAGCT...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCGGGTTGGAGAATTTGTaGTTCTTCCAGGAGTTGTAT +
Preference number: 5 (lower is better)
Translates to: WFIPSASRAGVSGPCGSAGLENL*FFQELY
Trigger: ATACAACTCCTGGAAGAACAACAAATTCTCCAACCC...GGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACCACGCATGTATTCCTTaGTGGTCAGCACAAGTTCGT +
Preference number: 5 (lower is better)
Translates to: CGSAMHQLLMSLAFPRMHHACIP*WSAQVR
Trigger: ACGAACTTGTGCTGACCACAAAGGAATACATGCGTG...GTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS GCA 90 bp GCTCAAGGATTGACATCTGGGTCTTCTTCCCATAAGAAGCTTTGTTaGCCCCAAAGGCATGCTTCTTCCACTCAGGAATGTCGTTGGGCA +
Preference number: 5 (lower is better)
Translates to: AQGLTSGSSSHKKLC*PQRHASSTQECRWA
Trigger: TGCCCAACGACATTCCTGAGTGGAAGAAGCATGCCTTTGGGGGCAACAAAGCTTCTTATGGGAAGAAGACCCAGATGTCAATCCTTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp TCCTCATACCGATTGTACAGAGGCTCCAGGCGCTGCTGTTTCTTCTaGTTGCTTAGCTTGGTTGGGTCAGAAACTTTGAAGAAAGCCGGA +
Preference number: 5 (lower is better)
Translates to: SSYRLYRGSRRCCFF*LLSLVGSETLKKAG
Trigger: TCCGGCTTTCTTCAAAGTTTCTGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGCAGCGCCTGGAGCCTCTGTACAATCGGTATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 90 bp CATAGTAGATGCCGTCGATGGTCAGAGATGTTTCTGCAATGTTGGTaGCAATCACCACCTTTCTGCTACCAGGGGGAGCTGGATCAAAGA +
Preference number: 5 (lower is better)
Translates to: HSRCRRWSEMFLQCW*QSPPFCYQGELDQR
Trigger: TCTTTGATCCAGCTCCCCCTGGTAGCAGAAAGGTGGTGATTGCCACCAACATTGCAGAAACATCTCTGACCATCGACGGCATCTACTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp CAGTGTATACAGCTGCTCCATGGCCGTGATCAGAGTTTCCATCGGTaGGGCATCCATGAAGTCAAAGGACAGCAGGTCATTAATACCCAT +
Preference number: 5 (lower is better)
Translates to: QCIQLLHGRDQSFHR*GIHEVKGQQVINTH
Trigger: ATGGGTATTAATGACCTGCTGTCCTTTGACTTCATGGATGCCCCACCGATGGAAACTCTGATCACGGCCATGGAGCAGCTGTATACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp GGAACACGAGTGTCATGGTTCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCTCTGGAAACTCTTCTTaGGAAAGCACATTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: GTRVSWFIPSASRAGVSGSGNSS*ESTLAA
Trigger: TGCTGCCAATGTGCTTTCCAAAGAAGAGTTTCCAGA...GCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGAACCATGACACTCGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp GGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTGATGTTTCTGCAATGTaGGTGGCAATCACCACCTTT +
Preference number: 5 (lower is better)
Translates to: GIRPLWVCHASVTHVPCLDVSAM*VAITTF
Trigger: AAAGGTGGTGATTGCCACCAACATTGCAGAAACATC...AAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp AGACTGATGACAAATTCAGCCAGATCCTTGTCGTTGATGCCCAAGTaGTTGTCCAGCTCCGTGCAAACCTTCGACACCAAAGACAGGTAC +
Preference number: 5 (lower is better)
Translates to: RLMTNSARSLSLMPK*LSSSVQTFDTKDRY
Trigger: GTACCTGTCTTTGGTGTCGAAGGTTTGCACGGAGCTGGACAATCACTTGGGCATCAACGACAAGGATCTGGCTGAATTTGTCATCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 90 bp ACCGCTTCCTTAGGCCTTCCAGCTGCACAAAGCAACCGAACTGCATaGTACTGGTCACTTTGCCATTGTAAATATCTCCAATGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: TASLGLPAAQSNRTA*YWSLCHCKYLQWQA
Trigger: AGCCTGCCATTGGAGATATTTACAATGGCAAAGTGACCAGTATCATGCAGTTCGGTTGCTTTGTGCAGCTGGAAGGCCTAAGGAAGCGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 90 bp TGGAGAATTTGTTGTTCTTCCAGGAGTTGTATACGGCCAGCAGGGTaGGGTGGTCCCCTTCTGTCTGGTGGAATTTGGCTTTCTTCTGAT +
Preference number: 5 (lower is better)
Translates to: WRICCSSRSCIRPAG*GGPLLSGGIWLSSD
Trigger: ATCAGAAGAAAGCCAAATTCCACCAGACAGAAGGGGACCACCTCACCCTGCTGGCCGTATACAACTCCTGGAAGAACAACAAATTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp CAGAATTTCCACTGGATAGGTTCGACCTGGGATTGTGAAGATGGGTaGTTCATAGAAGTACTGAGAAAACTTCACCGCATCCAGCGTGGC +
Preference number: 5 (lower is better)
Translates to: QNFHWIGSTWDCEDG*FIEVLRKLHRIQRG
Trigger: GCCACGCTGGATGCGGTGAAGTTTTCTCAGTACTTCTATGAAGCACCCATCTTCACAATCCCAGGTCGAACCTATCCAGTGGAAATTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp TCATTCCTTCAGCAAGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCTTTTCTTTTTCGGTTTaGGGTTTAACAACCGGATCT +
Preference number: 5 (lower is better)
Translates to: SFLQQAELGYQALVGLPCFSFSV*GLTTGS
Trigger: AGATCCGGTTGTTAAACCCAAAACCGAAAAAGAAAA...GCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCTTGCTGAAGGAATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTATGCTCAGGCTGGTCTaGGTTCCAGTGAAGGACAGA +
Preference number: 5 (lower is better)
Translates to: CISYSCPLPFPGCTPYLIMLRLV*VPVKDR
Trigger: TCTGTCCTTCACTGGAACCAAGACCAGCCTGAGCAT...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTGGTGTAGCCCACCTCTaGACCAAGGCAACAACCAAA +
Preference number: 5 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAGVAHL*TKATTK
Trigger: TTTGGTTGTTGCCTTGGTCAAGAGGTGGGCTACACC...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTGCATTTTGCACAGCATaGGCTCCAGAGGGAACTCTG +
Preference number: 5 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVAAFCTA*APEGTL
Trigger: CAGAGTTCCCTCTGGAGCCAATGCTGTGCAAAATGC...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 90 bp TCTGCTTCACAAATCCAGGGTCAACCACATAGTAGATGCCGTCGATaGTCAGAGATGTTTCTGCAATGTTGGTGGCAATCACCACCTTTC +
Preference number: 5 (lower is better)
Translates to: SASQIQGQPHSRCRR*SEMFLQCWWQSPPF
Trigger: GAAAGGTGGTGATTGCCACCAACATTGCAGAAACATCTCTGACCATCGACGGCATCTACTATGTGGTTGACCCTGGATTTGTGAAGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTTCCTCTTCTTCTTCTTaGTCCTGTCCCTGTGCTCAG +
Preference number: 5 (lower is better)
Translates to: CISYSCPLPFPGCTPYLISSSSS*SCPCAQ
Trigger: CTGAGCACAGGGACAGGACAAAGAAGAAGAAGAGGA...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp AGCAGAGCTGGGGTATCAGGCCCTTGTGGGTCTGCCATGCATCAGTTACTCATGATCCCTGTTTTAGAATaGTACACTTTCTGCTTCACA +
Preference number: 5 (lower is better)
Translates to: SRAGVSGPCGSAMHQLLMIPVLE*YTFCFT
Trigger: TGTGAAGCAGAAAGTGTACAATTCTAAAACAGGGAT...CATGAGTAACTGATGCATGGCAGACCCACAAGGGCCTGATACCCCAGCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp TTCATTCTTTCATACAGGATCTCACAAGCAGTGTCGATCTCTTCCTaGCCAGTCAAGAAAACCAAGATGTCACCTGGCGGCTCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: FILSYRISQAVSISS*PVKKTKMSPGGSVR
Trigger: TCTGACAGAGCCGCCAGGTGACATCTTGGTTTTCTTGACTGGTCAGGAAGAGATCGACACTGCTTGTGAGATCCTGTATGAAAGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp TTCTTAACGATTTTGATGGGGCTCATATCCATGCTCTGCTTGGTATaGCCTCTCAGGAACGGAGGCTCCTCTTCAACCAGTTCAATTTCA +
Preference number: 5 (lower is better)
Translates to: FLTILMGLISMLCLV*PLRNGGSSSTSSIS
Trigger: TGAAATTGAACTGGTTGAAGAGGAGCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATATGAGCCCCATCAAAATCGTTAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp TGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACAATTCTGCACCATTTTaGACCAGAGAAGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: CGSAMHQLLMSLAFPRMHNSAPF*TREALK
Trigger: TTTTAAGGCTTCTCTGGTCAAAAATGGTGCAGAATT...GTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CTTGCCTTTCCCAGGATGCACACCTTATCTGATTGTTCTTTTGTGTGTGTGGCTGACAGAACTTTGACCTaGACTCTCTGGCCTTTACTC +
Preference number: 5 (lower is better)
Translates to: LAFPRMHTLSDCSFVCVADRTLT*TLWPLL
Trigger: GAGTAAAGGCCAGAGAGTCAAGGTCAAAGTTCTGTC...AGCCACACACACAAAAGAACAATCAGATAAGGTGTGCATCCTGGGAAAGGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CTTGTGGGTCTGCCATGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCAATCAGCTTCATGTCTaGTCGTTTTTGAACTGTCTT +
Preference number: 5 (lower is better)
Translates to: LVGLPCISYSCPLPFPGCNQLHV*SFLNCL
Trigger: AAGACAGTTCAAAAACGACAAGACATGAAGCTGATT...GCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCATGGCAGACCCACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp TGCATCAGTTACTCATGTCCCTTGCCTTTCCCAGGATGCACACCTTATCTGATTTGCTGTTTCTTCTGCTaGCTTAGCTTGGTTGGGTCA +
Preference number: 5 (lower is better)
Translates to: CISYSCPLPFPGCTPYLICCFFC*LSLVGS
Trigger: TGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGCA...AATCAGATAAGGTGTGCATCCTGGGAAAGGCAAGGGACATGAGTAACTGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 90 bp TTCATCATCCACCTTGGGGAGAATGCCAGTCTCTTCGTCGAAGTCTaGAAACTCTTCTTTGGAAAGCACATTGGCAGCAATCATCTGTTT +
Preference number: 5 (lower is better)
Translates to: FIIHLGENASLFVEV*KLFFGKHIGSNHLF
Trigger: AAACAGATGATTGCTGCCAATGTGCTTTCCAAAGAAGAGTTTCCAGACTTCGACGAAGAGACTGGCATTCTCCCCAAGGTGGATGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp GTCCAAATAGTCTGTTTCCGGCTCCTTTGTGTACAGAATTTCCACTaGATAGGTTCGACCTGGGATTGTGAAGATGGGTGCTTCATAGAA +
Preference number: 5 (lower is better)
Translates to: VQIVCFRLLCVQNFH*IGSTWDCEDGCFIE
Trigger: TTCTATGAAGCACCCATCTTCACAATCCCAGGTCGAACCTATCCAGTGGAAATTCTGTACACAAAGGAGCCGGAAACAGACTATTTGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTGCAGCAATCATCTGTTaGATCTCCCACTTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: RLWPKPCLNVSILHYEESAAIIC*ISHFSG
Trigger: CCCAGAGAAGTGGGAGATCAAACAGATGATTGCTGC...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS TCA 90 bp CCTTTGTGTACAGAATTTCCACTGGATAGGTTCGACCTGGGATTGTaGAGATGGGTGCTTCATAGAAGTACTGAGAAAACTTCACCGCAT +
Preference number: 5 (lower is better)
Translates to: PLCTEFPLDRFDLGL*RWVLHRSTEKTSPH
Trigger: ATGCGGTGAAGTTTTCTCAGTACTTCTATGAAGCACCCATCTTCACAATCCCAGGTCGAACCTATCCAGTGGAAATTCTGTACACAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 90 bp CAATTTCAAGATCCTCATCTTCTTCATCATCCACCTTGGGGAGAATaGCAGTCTCTTCGTCGAAGTCTGGAAACTCTTCTTTGGAAAGCA +
Preference number: 5 (lower is better)
Translates to: QFQDPHLLHHPPWGE*QSLRRSLETLLWKA
Trigger: TGCTTTCCAAAGAAGAGTTTCCAGACTTCGACGAAGAGACTGGCATTCTCCCCAAGGTGGATGATGAAGAAGATGAGGATCTTGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 90 bp TTCCGGCTCCTTTGTGTACAGAATTTCCACTGGATAGGTTCGACCTaGGATTGTGAAGATGGGTGCTTCATAGAAGTACTGAGAAAACTT +
Preference number: 5 (lower is better)
Translates to: FRLLCVQNFHWIGST*DCEDGCFIEVLRKL
Trigger: AAGTTTTCTCAGTACTTCTATGAAGCACCCATCTTCACAATCCCAGGTCGAACCTATCCAGTGGAAATTCTGTACACAAAGGAGCCGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS-3UTR CAA 90 bp AGGCTCTGGCCAAAGCCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTTCAACCCAGTGTTTGTaGAGCCCCATGGGTATAGAA +
Preference number: 5 (lower is better)
Translates to: RLWPKPCLNVSILHYEESSTQCL*SPMGIE
Trigger: TTCTATACCCATGGGGCTCAACAAACACTGGGTTGA...ACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGGCTTTGGCCAGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGGGATCAACCCAGTGTTaGTTGAGCCCCATGGGTATA +
Preference number: 5 (lower is better)
Translates to: PCLNVSILHYEESQASKMGSTQC*LSPMGI
Trigger: TATACCCATGGGGCTCAACAAACACTGGGTTGATCC...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS-3UTR CAA 90 bp CCCTGCTTAAATGTTTCTATCTTACACTATGAAGAGAGTCAGGCTTCGAAAATGTGGATTTCCGGTACATaGGTGGTCAGCATTTCATCG +
Preference number: 5 (lower is better)
Translates to: PCLNVSILHYEESQASKMWISGT*VVSISS
Trigger: CGATGAAATGCTGACCACCAATGTACCGGAAATCCA...CATTTTCGAAGCCTGACTCTCTTCATAGTGTAAGATAGAAACATTTAAGCAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CAA 72 bp GCTTCCCGCTGGGCCTGCTTCAGCTCCCGTCTTTCCTaGGCCAGGGCACTCTGCATCATGGCTGCTTGGGAG +
Preference number: 6 (lower is better)
Translates to: ASRWACFSSRLS*ARALCIMAAWE
Trigger: CTCCCAAGCAGCCATGATGCAGAGTGCCCTGGCCAAGGAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp CCAATGGCAGGCTCTTCCGGGGGAGGGCGGTCCACATaGTTATCCCGCCATCTGTCCAAGTTCCTCTCCCCA +
Preference number: 6 (lower is better)
Translates to: PMAGSSGGGRST*LSRHLSKFLSP
Trigger: TGGGGAGAGGAACTTGGACAGATGGCGGGATAAGCATGTGGACCGCCCTCCCCCGGAAGAGCCTGCCATTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp AGGCCCTCGTCGTCCAGGGCCCCCAGTGTATACAGCTaGTCCATGGCCGTGATCAGAGTTTCCATCGGTGGG +
Preference number: 6 (lower is better)
Translates to: RPSSSRAPSVYS*SMAVIRVSIGG
Trigger: CCCACCGATGGAAACTCTGATCACGGCCATGGAGCAGCTGTATACACTGGGGGCCCTGGACGACGAGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp GGCATCATCCCAATCCCCCTCATGTTGGCAGCGATCTaGCTGCCTTCCGCATCGGGCAAGGGATCAACCCAG +
Preference number: 6 (lower is better)
Translates to: GIIPIPLMLAAI*LPSASGKGSTQ
Trigger: CTGGGTTGATCCCTTGCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTGGGATGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp TGCTTCAGCTCCCGTCTTTCCTTGGCCAGGGCACTCTaGATCATGGCTGCTTGGGAGAGTGAGCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: CFSSRLSLARAL*IMAAWESEPSG
Trigger: CCCAGATGGCTCACTCTCCCAAGCAGCCATGATGCAGAGTGCCCTGGCCAAGGAAAGACGGGAGCTGAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp GCAGCGTTCCGGAAGAACCCACTGCAGATGGCCTTCTaGACTCGGACTGTGGATTTGCCACAGGAGACCACG +
Preference number: 6 (lower is better)
Translates to: AAFRKNPLQMAF*TRTVDLPQETT
Trigger: CGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp AGCCCCATGGGTATAGAATCCATCTCTGCTTCCCGCTaGGCCTGCTTCAGCTCCCGTCTTTCCTTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SPMGIESISASR*ACFSSRLSLAR
Trigger: CCTGGCCAAGGAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGCAGAGATGGATTCTATACCCATGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp GAATGTCGTTGGGCATCATCCCAATCCCCCTCATGTTaGCAGCGATCTGCCTGCCTTCCGCATCGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: ECRWASSQSPSC*QRSACLPHRAR
Trigger: CCTTGCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTGGGATGATGCCCAACGACATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp GTAGGCACGCTCCGTGTACAGTCTGTAACACTTTCCTaGGCCAGTTCTCCCAGCCCGGCCAGCTCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: VGTLRVQSVTLS*ASSPSPASSLL
Trigger: AAGCAGAGAGCTGGCCGGGCTGGGAGAACTGGCCCAGGAAAGTGTTACAGACTGTACACGGAGCGTGCCTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp TCCCACTTCTCTGGGTCAGAGATTCGGGTGAGCCGCTaGCGCTCCAGCGAGTCATCCTCTACTTCAGGAGCG +
Preference number: 6 (lower is better)
Translates to: SHFSGSEIRVSR*RSSESSSTSGA
Trigger: CGCTCCTGAAGTAGAGGATGACTCGCTGGAGCGCAAGCGGCTCACCCGAATCTCTGACCCAGAGAAGTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp GGAATGTCGTTGGGCATCATCCCAATCCCCCTCATGTaGGCAGCGATCTGCCTGCCTTCCGCATCGGGCAAG +
Preference number: 6 (lower is better)
Translates to: GMSLGIIPIPLM*AAICLPSASGK
Trigger: CTTGCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTGGGATGATGCCCAACGACATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CCACTGCAGATGGCCTTCTGCACTCGGACTGTGGATTaGCCACAGGAGACCACGTCCAGCTTGTGCCTGTCC +
Preference number: 6 (lower is better)
Translates to: PLQMAFCTRTVD*PQETTSSLCLS
Trigger: GGACAGGCACAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp ATCTGCCTGCCTTCCGCATCGGGCAAGGGATCAACCCAGTGTTTGTaGAGCCCCATGGGTATAGAATCCATCTCTGCTTCCCGCTGGGCC +
Preference number: 6 (lower is better)
Translates to: ICLPSASGKGSTQCL*SPMGIESISASRWA
Trigger: GGCCCAGCGGGAAGCAGAGATGGATTCTATACCCATGGGGCTCAACAAACACTGGGTTGATCCCTTGCCCGATGCGGAAGGCAGGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp GCGATCTGCCTGCCTTCCGCATCGGGCAAGGGATCAACCCAGTGTTaGTTGAGCCCCATGGGTATAGAATCCATCTCTGCTTCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: AICLPSASGKGSTQC*LSPMGIESISASRW
Trigger: CCAGCGGGAAGCAGAGATGGATTCTATACCCATGGGGCTCAACAAACACTGGGTTGATCCCTTGCCCGATGCGGAAGGCAGGCAGATCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp TTCCACTCAGGAATGTCGTTGGGCATCATCCCAATCCCCCTCATGTaGGCAGCGATCTGCCTGCCTTCCGCATCGGGCAAGGGATCAACC +
Preference number: 6 (lower is better)
Translates to: FHSGMSLGIIPIPLM*AAICLPSASGKGST
Trigger: GGTTGATCCCTTGCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTGGGATGATGCCCAACGACATTCCTGAGTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp CGGAAGGCTCGGGAGATTCTCCAGGCGTTCGGCTCCTCATACCGATaGTACAGAGGCTCCAGGCGCTGCTGTTTCTTCTGCTTGCTTAGC +
Preference number: 6 (lower is better)
Translates to: RKAREILQAFGSSYR*YRGSRRCCFFCLLS
Trigger: GCTAAGCAAGCAGAAGAAACAGCAGCGCCTGGAGCCTCTGTACAATCGGTATGAGGAGCCGAACGCCTGGAGAATCTCCCGAGCCTTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS GCA 72 bp ATGGGTATAGAATCCATCTCTGCTTCCCGCTGGGCCTaGTTCAGCTCCCGTCTTTCCTTGGCCAGGGCACTC +
Preference number: 6 (lower is better)
Translates to: MGIESISASRWA*FSSRLSLARAL
Trigger: GAGTGCCCTGGCCAAGGAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGCAGAGATGGATTCTATACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp TCATCCCAATCCCCCTCATGTTGGCAGCGATCTGCCTaGCTTCCGCATCGGGCAAGGGATCAACCCAGTGTT +
Preference number: 6 (lower is better)
Translates to: SSQSPSCWQRSA*LPHRARDQPSV
Trigger: AACACTGGGTTGATCCCTTGCCCGATGCGGAAGGCAGGCAGATCGCTGCCAACATGAGGGGGATTGGGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp CTGCTACCAGGGGGAGCTGGATCAAAGATTCGGGTCTaGATCTCACTCGGAAGGGCAGAGTACACTGGGAGG +
Preference number: 6 (lower is better)
Translates to: LLPGGAGSKIRV*ISLGRAEYTGR
Trigger: CCTCCCAGTGTACTCTGCCCTTCCGAGTGAGATGCAGACCCGAATCTTTGATCCAGCTCCCCCTGGTAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp CACTGCAGATGGCCTTCTGCACTCGGACTGTGGATTTaGCACAGGAGACCACGTCCAGCTTGTGCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: HCRWPSALGLWI*HRRPRPACACP
Trigger: TGGACAGGCACAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp GTGGGTCCTTCTTGGCAGCGTTCCGGAAGAACCCACTaGAGATGGCCTTCTGCACTCGGACTGTGGATTTGC +
Preference number: 6 (lower is better)
Translates to: VGPSWQRSGRTH*RWPSALGLWIC
Trigger: GCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCGGAACGCTGCCAAGAAGGACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp AGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTaGATTTGCCACAGGAGACCACGTCCAGCTTGTGCC +
Preference number: 6 (lower is better)
Translates to: RTHCRWPSALGL*ICHRRPRPACA
Trigger: GGCACAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CACCTGCTGGTCTATCAGAGTCCGGTAGCCTTCCTGTaGGTCCTTCTTGGCAGCGTTCCGGAAGAACCCACT +
Preference number: 6 (lower is better)
Translates to: HLLVYQSPVAFL*VLLGSVPEEPT
Trigger: AGTGGGTTCTTCCGGAACGCTGCCAAGAAGGACCCACAGGAAGGCTACCGGACTCTGATAGACCAGCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp ACATCTTCCTCATCCAACATGGTCCGAGCTGAAGGGTaGTCCGGCTGGCAGAGGACGGGGAAGAGTTCCCTC +
Preference number: 6 (lower is better)
Translates to: TSSSSNMVRAEG*SGWQRTGKSSL
Trigger: GAGGGAACTCTTCCCCGTCCTCTGCCAGCCGGACAACCCTTCAGCTCGGACCATGTTGGATGAGGAAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CAA 72 bp CCCATGGCCTTGAGGGACAGCACTGTGCTGGCCAGGTaGGTTCTCTGGATTTCCGGTACATTGGTGGTCAGC +
Preference number: 6 (lower is better)
Translates to: PMALRDSTVLAR*VLWISGTLVVS
Trigger: GCTGACCACCAATGTACCGGAAATCCAGAGAACCAACCTGGCCAGCACAGTGCTGTCCCTCAAGGCCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CGGGAGATTCTCCAGGCGTTCGGCTCCTCATACCGATaGTACAGAGGCTCCAGGCGCTGCTGTTTCTTCTGC +
Preference number: 6 (lower is better)
Translates to: REILQAFGSSYR*YRGSRRCCFFC
Trigger: GCAGAAGAAACAGCAGCGCCTGGAGCCTCTGTACAATCGGTATGAGGAGCCGAACGCCTGGAGAATCTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CAA 90 bp TGTTTGATCTCCCACTTCTCTGGGTCAGAGATTCGGGTGAGCCGCTaGCGCTCCAGCGAGTCATCCTCTACTTCAGGAGCGCTGACAAGG +
Preference number: 6 (lower is better)
Translates to: CLISHFSGSEIRVSR*RSSESSSTSGALTR
Trigger: CCTTGTCAGCGCTCCTGAAGTAGAGGATGACTCGCTGGAGCGCAAGCGGCTCACCCGAATCTCTGACCCAGAGAAGTGGGAGATCAAACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp CGGAAGAACCCACTGCAGATGGCCTTCTGCACTCGGACTGTGGATTaGCCACAGGAGACCACGTCCAGCTTGTGCCTGTCCATTATGCCT +
Preference number: 6 (lower is better)
Translates to: RKNPLQMAFCTRTVD*PQETTSSLCLSIMP
Trigger: AGGCATAATGGACAGGCACAAGCTGGACGTGGTCTCCTGTGGCAAATCCACAGTCCGAGTGCAGAAGGCCATCTGCAGTGGGTTCTTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TCATCCAACATGGTCCGAGCTGAAGGGTTGTCCGGCTaGCAGAGGACGGGGAAGAGTTCCCTCAGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: SSNMVRAEGLSG*QRTGKSSLSFS
Trigger: AGAAAAGCTGAGGGAACTCTTCCCCGTCCTCTGCCAGCCGGACAACCCTTCAGCTCGGACCATGTTGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 72 bp TCGGGTCTGCATCTCACTCGGAAGGGCAGAGTACACTaGGAGGATGATCAACTCTGGGACATCAGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: SGLHLTRKGRVH*EDDQLWDIRSQ
Trigger: CTGGGACCTGATGTCCCAGAGTTGATCATCCTCCCAGTGTACTCTGCCCTTCCGAGTGAGATGCAGACCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CCCCCAAAGGCATGCTTCTTCCACTCAGGAATGTCGTaGGGCATCATCCCAATCCCCCTCATGTTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: PPKACFFHSGMS*GIIPIPLMLAA
Trigger: CGCTGCCAACATGAGGGGGATTGGGATGATGCCCAACGACATTCCTGAGTGGAAGAAGCATGCCTTTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp GGCCAGGGCACTCTGCATCATGGCTGCTTGGGAGAGTaGGCCATCTGGGTTCTTAACGATTTTGATGGGGCT +
Preference number: 6 (lower is better)
Translates to: GQGTLHHGCLGE*AIWVLNDFDGA
Trigger: AGCCCCATCAAAATCGTTAAGAACCCAGATGGCTCACTCTCCCAAGCAGCCATGATGCAGAGTGCCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp GAGCAAACTCCACAAGCCACCGGGGGTCGATGGTGGTaGCCTCACGCATGTATTCCTTTGTGGTCAGCACAA +
Preference number: 6 (lower is better)
Translates to: EQTPQATGGRWW*PHACIPLWSAQ
Trigger: TTGTGCTGACCACAAAGGAATACATGCGTGAGGTCACCACCATCGACCCCCGGTGGCTTGTGGAGTTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp GTGTTTGTTGAGCCCCATGGGTATAGAATCCATCTCTaGTTCCCGCTGGGCCTGCTTCAGCTCCCGTCTTTC +
Preference number: 6 (lower is better)
Translates to: VFVEPHGYRIHL*FPLGLLQLPSF
Trigger: GAAAGACGGGAGCTGAAGCAGGCCCAGCGGGAAGCAGAGATGGATTCTATACCCATGGGGCTCAACAAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp ACGTCCAGCTTGTGCCTGTCCATTATGCCTAACATCTaGTTCCGAATGTCCTGGGCACGGCGTAGGGAACGA +
Preference number: 6 (lower is better)
Translates to: TSSLCLSIMPNI*FRMSWARRRER
Trigger: TCGTTCCCTACGCCGTGCCCAGGACATTCGGAAGCAGATGTTAGGCATAATGGACAGGCACAAGCTGGACGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CCCCAAAGGCATGCTTCTTCCACTCAGGAATGTCGTTaGGCATCATCCCAATCCCCCTCATGTTGGCAGCGA +
Preference number: 6 (lower is better)
Translates to: PQRHASSTQECR*ASSQSPSCWQR
Trigger: TCGCTGCCAACATGAGGGGGATTGGGATGATGCCCAACGACATTCCTGAGTGGAAGAAGCATGCCTTTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp GGTGGCAATCACCACCTTTCTGCTACCAGGGGGAGCTaGATCAAAGATTCGGGTCTGCATCTCACTCGGAAG +
Preference number: 6 (lower is better)
Translates to: GGNHHLSATRGS*IKDSGLHLTRK
Trigger: CTTCCGAGTGAGATGCAGACCCGAATCTTTGATCCAGCTCCCCCTGGTAGCAGAAAGGTGGTGATTGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TGGCCAGGTTGGTTCTCTGGATTTCCGGTACATTGGTaGTCAGCATTTCATCGCGGTAGGCACGCTCCGTGT +
Preference number: 6 (lower is better)
Translates to: WPGWFSGFPVHW*SAFHRGRHAPC
Trigger: ACACGGAGCGTGCCTACCGCGATGAAATGCTGACCACCAATGTACCGGAAATCCAGAGAACCAACCTGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CAGATGCACAGACATGATGAGCATTTTGCACAGCATTaGCTCCAGAGGGAACTCTGCCATCCTGCGGCCCAG +
Preference number: 6 (lower is better)
Translates to: QMHRHDEHFAQH*LQRELCHPAAQ
Trigger: CTGGGCCGCAGGATGGCAGAGTTCCCTCTGGAGCCAATGCTGTGCAAAATGCTCATCATGTCTGTGCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CATTCGGGCTGTCTGTTGAAGAGAGCACTGGAGGGGTaGATATACACCACCTGCTGGTCTATCAGAGTCCGG +
Preference number: 6 (lower is better)
Translates to: HSGCLLKRALEG*IYTTCWSIRVR
Trigger: CCGGACTCTGATAGACCAGCAGGTGGTGTATATCCACCCCTCCAGTGCTCTCTTCAACAGACAGCCCGAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp ACTTTGACCTTGACTCTCTGGCCTTTACTCACAACATCAGCCACATaGGCCACTCGACCTTCCCGTCGGAGCTCAGAGATGTGCACCAGG +
Preference number: 6 (lower is better)
Translates to: TLTLTLWPLLTTSAT*ATRPSRRSSEMCTR
Trigger: CCTGGTGCACATCTCTGAGCTCCGACGGGAAGGTCGAGTGGCCAATGTGGCTGATGTTGTGAGTAAAGGCCAGAGAGTCAAGGTCAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp GTGGTCAGCACAAGTTCGTGGTATACCACCCATTCGGGCTGTCTGTaGAAGAGAGCACTGGAGGGGTGGATATACACCACCTGCTGGTCT +
Preference number: 6 (lower is better)
Translates to: VVSTSSWYTTHSGCL*KRALEGWIYTTCWS
Trigger: AGACCAGCAGGTGGTGTATATCCACCCCTCCAGTGCTCTCTTCAACAGACAGCCCGAATGGGTGGTATACCACGAACTTGTGCTGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp CTGGGTACACCCAATCTTGCCCCTGGAAGTATAGCCTaGCTCTGCCAGGTACTGGGTGATCTGTGTTGTCTT +
Preference number: 6 (lower is better)
Translates to: LGTPNLAPGSIA*LCQVLGDLCCL
Trigger: AAGACAACACAGATCACCCAGTACCTGGCAGAGGCAGGCTATACTTCCAGGGGCAAGATTGGGTGTACCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TGCCGTCGATGGTCAGAGATGTTTCTGCAATGTTGGTaGCAATCACCACCTTTCTGCTACCAGGGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: CRRWSEMFLQCW*QSPPFCYQGEL
Trigger: CAGCTCCCCCTGGTAGCAGAAAGGTGGTGATTGCCACCAACATTGCAGAAACATCTCTGACCATCGACGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CAGCTGCTCCATGGCCGTGATCAGAGTTTCCATCGGTaGGGCATCCATGAAGTCAAAGGACAGCAGGTCATT +
Preference number: 6 (lower is better)
Translates to: QLLHGRDQSFHR*GIHEVKGQQVI
Trigger: AATGACCTGCTGTCCTTTGACTTCATGGATGCCCCACCGATGGAAACTCTGATCACGGCCATGGAGCAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp TTGACTCTCTGGCCTTTACTCACAACATCAGCCACATaGGCCACTCGACCTTCCCGTCGGAGCTCAGAGATG +
Preference number: 6 (lower is better)
Translates to: LTLWPLLTTSAT*ATRPSRRSSEM
Trigger: CATCTCTGAGCTCCGACGGGAAGGTCGAGTGGCCAATGTGGCTGATGTTGTGAGTAAAGGCCAGAGAGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp GTGGGTCTGTCTGGGTTCCGCATTGACGTCTCTTCATaGGTCTCGCCAACCAGATTTCTCCGTCTGTTTGGG +
Preference number: 6 (lower is better)
Translates to: VGLSGFRIDVSS*VSPTRFLRLFG
Trigger: CCCAAACAGACGGAGAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CAAGGGAGAGGTGAGTGGGTCTGTCTGGGTTCCGCATaGACGTCTCTTCATTGGTCTCGCCAACCAGATTTC +
Preference number: 6 (lower is better)
Translates to: QGRGEWVCLGSA*TSLHWSRQPDF
Trigger: GAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCACTCACCTCTCCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CCTTCCGCATCGGGCAAGGGATCAACCCAGTGTTTGTaGAGCCCCATGGGTATAGAATCCATCTCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: PSASGKGSTQCL*SPMGIESISAS
Trigger: GGAAGCAGAGATGGATTCTATACCCATGGGGCTCAACAAACACTGGGTTGATCCCTTGCCCGATGCGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CTGCCTTCCGCATCGGGCAAGGGATCAACCCAGTGTTaGTTGAGCCCCATGGGTATAGAATCCATCTCTGCT +
Preference number: 6 (lower is better)
Translates to: LPSASGKGSTQC*LSPMGIESISA
Trigger: AGCAGAGATGGATTCTATACCCATGGGGCTCAACAAACACTGGGTTGATCCCTTGCCCGATGCGGAAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CACCACGGGTTGGAGAATTTGTTGTTCTTCCAGGAGTaGTATACGGCCAGCAGGGTGAGGTGGTCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: HHGLENLLFFQE*YTASRVRWSPS
Trigger: AGAAGGGGACCACCTCACCCTGCTGGCCGTATACAACTCCTGGAAGAACAACAAATTCTCCAACCCGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp CGCTGCTGTTTCTTCTGCTTGCTTAGCTTGGTTGGGTCAGAAACTTaGAAGAAAGCCGGAGCAAACTCCACAAGCCACCGGGGGTCGATG +
Preference number: 6 (lower is better)
Translates to: RCCFFCLLSLVGSET*KKAGANSTSHRGSM
Trigger: CATCGACCCCCGGTGGCTTGTGGAGTTTGCTCCGGCTTTCTTCAAAGTTTCTGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGCAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp AAGGGAGAGGTGAGTGGGTCTGTCTGGGTTCCGCATTaGCGTCTCTTCATTGGTCTCGCCAACCAGATTTCT +
Preference number: 6 (lower is better)
Translates to: KGEVSGSVWVPH*RLFIGLANQIS
Trigger: AGAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCACTCACCTCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp TGTTGTTCTTCCAGGAGTTGTATACGGCCAGCAGGGTaGGGTGGTCCCCTTCTGTCTGGTGGAATTTGGCTT +
Preference number: 6 (lower is better)
Translates to: CCSSRSCIRPAG*GGPLLSGGIWL
Trigger: AAGCCAAATTCCACCAGACAGAAGGGGACCACCTCACCCTGCTGGCCGTATACAACTCCTGGAAGAACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp CAAGTTCGTGGTATACCACCCATTCGGGCTGTCTGTTaGAGAGAGCACTGGAGGGGTGGATATACACCACCT +
Preference number: 6 (lower is better)
Translates to: QVRGIPPIRAVC*REHWRGGYTPP
Trigger: AGGTGGTGTATATCCACCCCTCCAGTGCTCTCTTCAACAGACAGCCCGAATGGGTGGTATACCACGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp GGGTTTAACAACCGGATCTTTACTGGTAGAAGGCTTTaGAGGAGGCCGCATGGTCTGTATGAGACGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GFNNRIFTGRRL*RRPHGLYETQE
Trigger: CTCCTGCGTCTCATACAGACCATGCGGCCTCCTGCAAAGCCTTCTACCAGTAAAGATCCGGTTGTTAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000039152.14
CDS CCA 72 bp GAATGTGACCGAGAGCGTGATCGGTGTCTCCGCTTATaGTCTCTCTCTCTATCTCGCTCTCTGTCTCGTTCT +
Preference number: 6 (lower is better)
Translates to: ECDRERDRCLRL*SLSLSRSLSRS
Trigger: AGAACGAGACAGAGAGCGAGATAGAGAGAGAGACCATAAGCGGAGACACCGATCACGCTCTCGGTCACATTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TGGGTCTGTCTGGGTTCCGCATTGACGTCTCTTCATTaGTCTCGCCAACCAGATTTCTCCGTCTGTTTGGGT +
Preference number: 6 (lower is better)
Translates to: WVCLGSALTSLH*SRQPDFSVCLG
Trigger: ACCCAAACAGACGGAGAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAATGCGGAACCCAGACAGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CTTTCCTTGGCCAGGGCACTCTGCATCATGGCTGCTTaGGAGAGTGAGCCATCTGGGTTCTTAACGATTTTG +
Preference number: 6 (lower is better)
Translates to: LSLARALCIMAA*ESEPSGFLTIL
Trigger: CAAAATCGTTAAGAACCCAGATGGCTCACTCTCCCAAGCAGCCATGATGCAGAGTGCCCTGGCCAAGGAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp AGATGCCGTCGATGGTCAGAGATGTTTCTGCAATGTTaGTGGCAATCACCACCTTTCTGCTACCAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: RCRRWSEMFLQC*WQSPPFCYQGE
Trigger: CTCCCCCTGGTAGCAGAAAGGTGGTGATTGCCACCAACATTGCAGAAACATCTCTGACCATCGACGGCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TTGAGGGACAGCACTGTGCTGGCCAGGTTGGTTCTCTaGATTTCCGGTACATTGGTGGTCAGCATTTCATCG +
Preference number: 6 (lower is better)
Translates to: LRDSTVLARLVL*ISGTLVVSISS
Trigger: CGATGAAATGCTGACCACCAATGTACCGGAAATCCAGAGAACCAACCTGGCCAGCACAGTGCTGTCCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TTCTTCCAGGAGTTGTATACGGCCAGCAGGGTGAGGTaGTCCCCTTCTGTCTGGTGGAATTTGGCTTTCTTC +
Preference number: 6 (lower is better)
Translates to: FFQELYTASRVR*SPSVWWNLAFF
Trigger: GAAGAAAGCCAAATTCCACCAGACAGAAGGGGACCACCTCACCCTGCTGGCCGTATACAACTCCTGGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp GGCTCCAGGCGCTGCTGTTTCTTCTGCTTGCTTAGCTaGGTTGGGTCAGAAACTTTGAAGAAAGCCGGAGCA +
Preference number: 6 (lower is better)
Translates to: GSRRCCFFCLLS*VGSETLKKAGA
Trigger: TGCTCCGGCTTTCTTCAAAGTTTCTGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGCAGCGCCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp TCTTCTCCTGTCTCTTGGTCCACATCCTTCATGCTCAGGCTGGTCTaGGTTCCAGTGAAGGACAGAACTTTGACCTTGACTCTCTGGCCT +
Preference number: 6 (lower is better)
Translates to: SSPVSWSTSFMLRLV*VPVKDRTLTLTLWP
Trigger: AGGCCAGAGAGTCAAGGTCAAAGTTCTGTCCTTCACTGGAACCAAGACCAGCCTGAGCATGAAGGATGTGGACCAAGAGACAGGAGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp TCATTAATACCCATGGCCTTGAGGGACAGCACTGTGCTGGCCAGGTaGGTTCTCTGGATTTCCGGTACATTGGTGGTCAGCATTTCATCG +
Preference number: 6 (lower is better)
Translates to: SLIPMALRDSTVLAR*VLWISGTLVVSISS
Trigger: CGATGAAATGCTGACCACCAATGTACCGGAAATCCAGAGAACCAACCTGGCCAGCACAGTGCTGTCCCTCAAGGCCATGGGTATTAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp ATTTTGATGGGGCTCATATCCATGCTCTGCTTGGTATaGCCTCTCAGGAACGGAGGCTCCTCTTCAACCAGT +
Preference number: 6 (lower is better)
Translates to: ILMGLISMLCLV*PLRNGGSSSTS
Trigger: ACTGGTTGAAGAGGAGCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATATGAGCCCCATCAAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp AAGAAAACCAAGATGTCACCTGGCGGCTCTGTCAGATaGATCTGCATGACCGTGATCAGGCTAGCGTCCAAA +
Preference number: 6 (lower is better)
Translates to: KKTKMSPGGSVR*ICMTVIRLASK
Trigger: TTTGGACGCTAGCCTGATCACGGTCATGCAGATCCATCTGACAGAGCCGCCAGGTGACATCTTGGTTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp TCTGGGTTCTTAACGATTTTGATGGGGCTCATATCCATGCTCTGCTaGGTATGCCCTCTCAGGAACGGAGGCTCCTCTTCAACCAGTTCA +
Preference number: 6 (lower is better)
Translates to: SGFLTILMGLISMLC*VCPLRNGGSSSTSS
Trigger: TGAACTGGTTGAAGAGGAGCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATATGAGCCCCATCAAAATCGTTAAGAACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp TTGTACAGAGGCTCCAGGCGCTGCTGTTTCTTCTGCTTGCTTAGCTaGGTTGGGTCAGAAACTTTGAAGAAAGCCGGAGCAAACTCCACA +
Preference number: 6 (lower is better)
Translates to: LYRGSRRCCFFCLLS*VGSETLKKAGANST
Trigger: TGTGGAGTTTGCTCCGGCTTTCTTCAAAGTTTCTGACCCAACCAAGCTAAGCAAGCAGAAGAAACAGCAGCGCCTGGAGCCTCTGTACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp TTCCCAGACCCTGTCTCTCCAATTACAATTAGGATCTaGTTGTCATGCACAGCCTGCACCAGCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: FPDPVSPITIRI*LSCTACTSCSF
Trigger: GAAGGAGCAGCTGGTGCAGGCTGTGCATGACAATCAGATCCTAATTGTAATTGGAGAGACAGGGTCTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp TCATACAGGATCTCACAAGCAGTGTCGATCTCTTCCTaGCCAGTCAAGAAAACCAAGATGTCACCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: SYRISQAVSISS*PVKKTKMSPGG
Trigger: GCCGCCAGGTGACATCTTGGTTTTCTTGACTGGTCAGGAAGAGATCGACACTGCTTGTGAGATCCTGTATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp TTCTTAACGATTTTGATGGGGCTCATATCCATGCTCTaGTTGGTATGCCCTCTCAGGAACGGAGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: FLTILMGLISML*LVCPLRNGGSS
Trigger: AGAGGAGCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATATGAGCCCCATCAAAATCGTTAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp CCCTTCTGTCTGGTGGAATTTGGCTTTCTTCTGATCTaGAAGGGCCTGTTTATCCTTGGGTCGGTAGAAGAC +
Preference number: 6 (lower is better)
Translates to: PFCLVEFGFLLI*KGLFILGSVED
Trigger: GTCTTCTACCGACCCAAGGATAAACAGGCCCTTGCAGATCAGAAGAAAGCCAAATTCCACCAGACAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp TTAACGATTTTGATGGGGCTCATATCCATGCTCTGCTaGGTATGCCCTCTCAGGAACGGAGGCTCCTCTTCA +
Preference number: 6 (lower is better)
Translates to: LTILMGLISMLC*VCPLRNGGSSS
Trigger: TGAAGAGGAGCCTCCGTTCCTGAGAGGGCATACCAAGCAGAGCATGGATATGAGCCCCATCAAAATCGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp TTCTTCTGCTTGCTTAGCTTGGTTGGGTCAGAAACTTaGAAGAAAGCCGGAGCAAACTCCACAAGCCACCGG +
Preference number: 6 (lower is better)
Translates to: FFCLLSLVGSET*KKAGANSTSHR
Trigger: CCGGTGGCTTGTGGAGTTTGCTCCGGCTTTCTTCAAAGTTTCTGACCCAACCAAGCTAAGCAAGCAGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 90 bp TTGACGTCTCTTCATTGGTCTCGCCAACCAGATTTCTCCGTCTGTTaGGGTTTAGGTCTTCTCCTGTCTCTTGGTCCACATCCTTCATGC +
Preference number: 6 (lower is better)
Translates to: LTSLHWSRQPDFSVC*GLGLLLSLGPHPSC
Trigger: GCATGAAGGATGTGGACCAAGAGACAGGAGAAGACCTAAACCCAAACAGACGGAGAAATCTGGTTGGCGAGACCAATGAAGAGACGTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp ACAAATTCAGCCAGATCCTTGTCGTTGATGCCCAAGTaGTTGTCCAGCTCCGTGCAAACCTTCGACACCAAA +
Preference number: 6 (lower is better)
Translates to: TNSARSLSLMPK*LSSSVQTFDTK
Trigger: TTTGGTGTCGAAGGTTTGCACGGAGCTGGACAATCACTTGGGCATCAACGACAAGGATCTGGCTGAATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp CTCTCGTGTGCTTCATCCAACATAATGATGGCATACTaGGTGAGATCGGGGTCAATCAGGCACTCTCTTAGC +
Preference number: 6 (lower is better)
Translates to: LSCASSNIMMAY*VRSGSIRHSLS
Trigger: GCTAAGAGAGTGCCTGATTGACCCCGATCTCACTCAGTATGCCATCATTATGTTGGATGAAGCACACGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CACCTTGGGGAGAATGCCAGTCTCTTCGTCGAAGTCTaGAAACTCTTCTTTGGAAAGCACATTGGCAGCAAT +
Preference number: 6 (lower is better)
Translates to: HLGENASLFVEV*KLFFGKHIGSN
Trigger: ATTGCTGCCAATGTGCTTTCCAAAGAAGAGTTTCCAGACTTCGACGAAGAGACTGGCATTCTCCCCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp TCACGCATGTATTCCTTTGTGGTCAGCACAAGTTCGTaGTATACCACCCATTCGGGCTGTCTGTTGAAGAGA +
Preference number: 6 (lower is better)
Translates to: SRMYSFVVSTSS*YTTHSGCLLKR
Trigger: TCTCTTCAACAGACAGCCCGAATGGGTGGTATACCACGAACTTGTGCTGACCACAAAGGAATACATGCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CTGGTCTTGGTTCCAGTGAAGGACAGAACTTTGACCTaGACTCTCTGGCCTTTACTCACAACATCAGCCACA +
Preference number: 6 (lower is better)
Translates to: LVLVPVKDRTLT*TLWPLLTTSAT
Trigger: TGTGGCTGATGTTGTGAGTAAAGGCCAGAGAGTCAAGGTCAAAGTTCTGTCCTTCACTGGAACCAAGACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CAA 72 bp CTTCATTGGTCTCGCCAACCAGATTTCTCCGTCTGTTaGGGTTTAGGTCTTCTCCTGTCTCTTGGTCCACAT +
Preference number: 6 (lower is better)
Translates to: LHWSRQPDFSVC*GLGLLLSLGPH
Trigger: ATGTGGACCAAGAGACAGGAGAAGACCTAAACCCAAACAGACGGAGAAATCTGGTTGGCGAGACCAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp CACTGGATAGGTTCGACCTGGGATTGTGAAGATGGGTaGTTCATAGAAGTACTGAGAAAACTTCACCGCATC +
Preference number: 6 (lower is better)
Translates to: HWIGSTWDCEDG*FIEVLRKLHRI
Trigger: GATGCGGTGAAGTTTTCTCAGTACTTCTATGAAGCACCCATCTTCACAATCCCAGGTCGAACCTATCCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS GCA 72 bp TCTGCTTCACAAATCCAGGGTCAACCACATAGTAGATaGCGTCGATGGTCAGAGATGTTTCTGCAATGTTGG +
Preference number: 6 (lower is better)
Translates to: SASQIQGQPHSR*RRWSEMFLQCW
Trigger: CCAACATTGCAGAAACATCTCTGACCATCGACGGCATCTACTATGTGGTTGACCCTGGATTTGTGAAGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CAATTTCAAGATCCTCATCTTCTTCATCATCCACCTTaGGGAGAATGCCAGTCTCTTCGTCGAAGTCTGGAA +
Preference number: 6 (lower is better)
Translates to: QFQDPHLLHHPP*GECQSLRRSLE
Trigger: TTCCAGACTTCGACGAAGAGACTGGCATTCTCCCCAAGGTGGATGATGAAGAAGATGAGGATCTTGAAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp TACTTTTCTCGGTCTTTCCGATCTTTGAAGGGACTCTaGCTTCTGCTCCTAGATCTGTATCTAGATTTCCCC +
Preference number: 6 (lower is better)
Translates to: YFSRSFRSLKGL*LLLLDLYLDFP
Trigger: GGGGAAATCTAGATACAGATCTAGGAGCAGAAGTCAGAGTCCCTTCAAAGATCGGAAAGACCGAGAAAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS TCA 72 bp TTAGGCCTTCCAGCTGCACAAAGCAACCGAACTGCATaGTACTGGTCACTTTGCCATTGTAAATATCTCCAA +
Preference number: 6 (lower is better)
Translates to: LGLPAAQSNRTA*YWSLCHCKYLQ
Trigger: TTGGAGATATTTACAATGGCAAAGTGACCAGTATCATGCAGTTCGGTTGCTTTGTGCAGCTGGAAGGCCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2
CDS CCA 72 bp CTTTGTGTACAGAATTTCCACTGGATAGGTTCGACCTaGGATTGTGAAGATGGGTGCTTCATAGAAGTACTG +
Preference number: 6 (lower is better)
Translates to: LCVQNFHWIGST*DCEDGCFIEVL
Trigger: CAGTACTTCTATGAAGCACCCATCTTCACAATCCCAGGTCGAACCTATCCAGTGGAAATTCTGTACACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000039152.14
ENSMUST00000129741.2