Pregenerated sensors for DHRS7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021094Ensembl transcript IDs: ENSMUST00000021512.11, ENSMUST00000220821.2, ENSMUST00000221750.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTCCCCAACTTGCAGTTTAGCCATGCGGCCCAGGTTGGCATATACTaGCATATGTATGCCCCCAACAGCACAGGATGGTCAGAGATCCAG | + |
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Preference number: 1 (lower is better) Translates to: FPNLQFSHAAQVGIY*HMYAPNSTGWSEIQ Trigger: CTGGATCTCTGACCATCCTGTGCTGTTGGGGGCATACATATGGCAGTATATGCCAACCTGGGCCGCATGGCTAAACTGCAAGTTGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR TCA 90 bp | GATGGTCAGAGATCCAGACTTCCTTCAGATCATTGGCCATGGAGATaGGCATCAGCCGCACACAGCGGCTCGTTGGCATCTTGTAACTCT | + |
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Preference number: 1 (lower is better) Translates to: DGQRSRLPSDHWPWR*ASAAHSGSLASCNS Trigger: AGAGTTACAAGATGCCAACGAGCCGCTGTGTGCGGCTGATGCTCATCTCCATGGCCAATGATCTGAAGGAAGTCTGGATCTCTGACCATC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR GCA 90 bp | TGGCACAGTAGCCACTGGAAAGGGACACAGAGGCAATCCCCGCGATaGTGTTCACAGTCACAATCTTCCCTTGTTTCCTCTCTATCATGT | + |
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Preference number: 1 (lower is better) Translates to: WHSSHWKGTQRQSPR*CSQSQSSLVSSLSC Trigger: ACATGATAGAGAGGAAACAAGGGAAGATTGTGACTGTGAACAGCATCGCGGGGATTGCCTCTGTGTCCCTTTCCAGTGGCTACTGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 90 bp | CAGGTTGGCATATACTGCCATATGTATGCCCCCAACAGCACAGGATaGTCAGAGATCCAGACTTCCTTCAGATCATTGGCCATGGAGATG | + |
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Preference number: 1 (lower is better) Translates to: QVGIYCHMYAPNSTG*SEIQTSFRSLAMEM Trigger: CATCTCCATGGCCAATGATCTGAAGGAAGTCTGGATCTCTGACCATCCTGTGCTGTTGGGGGCATACATATGGCAGTATATGCCAACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 90 bp | ATCATTGGCCATGGAGATGAGCATCAGCCGCACACAGCGGCTCGTTaGCATCTTGTAACTCTGGTCTATGTTGTTTCTCATAGACTTAGT | + |
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Preference number: 1 (lower is better) Translates to: IIGHGDEHQPHTAAR*HLVTLVYVVSHRLS Trigger: ACTAAGTCTATGAGAAACAACATAGACCAGAGTTACAAGATGCCAACGAGCCGCTGTGTGCGGCTGATGCTCATCTCCATGGCCAATGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 90 bp | CAATCTTCCCTTGTTTCCTCTCTATCATGTGAGGCAGGACACACTTaGTCAAGGATACTGTCCCTATGTAGTTCAGATTTATCAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: QSSLVSSLSCEAGHT*SRILSLCSSDLSAP Trigger: AGGAGCTGATAAATCTGAACTACATAGGGACAGTATCCTTGACCAAGTGTGTCCTGCCTCACATGATAGAGAGGAAACAAGGGAAGATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR TCA 90 bp | TGGTCAAGGATACTGTCCCTATGTAGTTCAGATTTATCAGCTCCTTaGAGACATCCAAGTTGGTTTCTAGAACTAAGGAACGCTGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: WSRILSLCSSDLSAP*RHPSWFLELRNAGF Trigger: GAAGCCAGCGTTCCTTAGTTCTAGAAACCAACTTGGATGTCTTCAAGGAGCTGATAAATCTGAACTACATAGGGACAGTATCCTTGACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR GCA 90 bp | CAACAAGTGGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTTaGCTTCAAGAATTTATAAGGCAAGTCTGGATCCAAATTATTCTT | + |
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Preference number: 1 (lower is better) Translates to: QQVAQTSLVVVSILL*LQEFIRQVWIQIIL Trigger: AAGAATAATTTGGATCCAGACTTGCCTTATAAATTCTTGAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CAA 90 bp | CCCAACAGCACAGGATGGTCAGAGATCCAGACTTCCTTCAGATCATaGGCCATGGAGATGAGCATCAGCCGCACACAGCGGCTCGTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PNSTGWSEIQTSFRS*AMEMSISRTQRLVG Trigger: GCCAACGAGCCGCTGTGTGCGGCTGATGCTCATCTCCATGGCCAATGATCTGAAGGAAGTCTGGATCTCTGACCATCCTGTGCTGTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CAA 90 bp | GGATTCTTTCCTTCCCCAACTTGCAGTTTAGCCATGCGGCCCAGGTaGGCATATACTGCCATATGTATGCCCCCAACAGCACAGGATGGT | + |
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Preference number: 2 (lower is better) Translates to: GFFPSPTCSLAMRPR*AYTAICMPPTAQDG Trigger: ACCATCCTGTGCTGTTGGGGGCATACATATGGCAGTATATGCCAACCTGGGCCGCATGGCTAAACTGCAAGTTGGGGAAGGAAAGAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTCCCCAACTTGCAGTTTAGCCATGCGGCCCAGGTTGGCATATACTGCCATAGAGGCAGGACACACTTaGTCAAGGATACTGTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: PSPTCSLAMRPRLAYTAIEAGHT*SRILSL Trigger: TAGGGACAGTATCCTTGACCAAGTGTGTCCTGCCTC...TATGGCAGTATATGCCAACCTGGGCCGCATGGCTAAACTGCAAGTTGGGGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CAA 90 bp | CACAGAGGCAATCCCCGCGATGCTGTTCACAGTCACAATCTTCCCTaGTTTCCTCTCTATCATGTGAGGCAGGACACACTTGGTCAAGGA | + |
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Preference number: 2 (lower is better) Translates to: HRGNPRDAVHSHNLP*FPLYHVRQDTLGQG Trigger: TCCTTGACCAAGTGTGTCCTGCCTCACATGATAGAGAGGAAACAAGGGAAGATTGTGACTGTGAACAGCATCGCGGGGATTGCCTCTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTTGCCTTCCCCGAAGAGCATGCTTaGTGGCACAGTAGCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: LNKWLRHLWWLFQSFFAFPEEHA*WHSSHW Trigger: CCAGTGGCTACTGTGCCAGCAAGCATGCTCTTCGGG...GAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTTGCCTTCTGGCACAGTAGCCACTaGAAAGGGACACAGAGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LNKWLRHLWWLFQSFFAFWHSSH*KGTQRQ Trigger: TTGCCTCTGTGTCCCTTTCCAGTGGCTACTGTGCCA...GAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR CCA 90 bp | CCGGGTAAACGTTGCAAAATGTTATGCCTGGATATTGGCCGAGCTCACTATGGAGAAGAGCATGCTTGCTaGCACAGTAGCCACTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: PGKRCKMLCLDIGRAHYGEEHAC*HSSHWK Trigger: TTTCCAGTGGCTACTGTGCCAGCAAGCATGCTCTTC...TCCATAGTGAGCTCGGCCAATATCCAGGCATAACATTTTGCAACGTTTACCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTTGCCTTCTTCATTCTCAACAAGTaGCTCAGACATCTCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LNKWLRHLWWLFQSFFAFFILNK*LRHLWW Trigger: CCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAA...GAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGGTAAACGTTGCAAAATGTTATGCCTGGATATTGGCCGAGCTCACTATGGAGATTTATCAGCTCCTTaGAGACATCCAAGTTGGTTT | + |
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Preference number: 2 (lower is better) Translates to: PGKRCKMLCLDIGRAHYGDLSAP*RHPSWF Trigger: AAACCAACTTGGATGTCTTCAAGGAGCTGATAAATC...TCCATAGTGAGCTCGGCCAATATCCAGGCATAACATTTTGCAACGTTTACCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTGGCCCTCCTTCTGTGTaGAAGCTTACTGTACATACG | + |
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Preference number: 2 (lower is better) Translates to: QKGTICSCTKARYRTKFSGPPSV*KLTVHT Trigger: CGTATGTACAGTAAGCTTGCACACAGAAGGAGGGCC...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCTCCTTTCATTCTCAACAAGTaGCTCAGACATCTCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LNRKLYQKLNPKVVTGPPFILNK*LRHLWW Trigger: CCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAA...AGGAGGGCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| 3UTR CAA 90 bp | TCAACAAGTGGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTaGCCTTCAAGAATTTATAAGGCAAGTCTGGATCCAAATTATTCT | + |
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Preference number: 2 (lower is better) Translates to: STSGSDISGGCFNPS*PSRIYKASLDPNYS Trigger: AGAATAATTTGGATCCAGACTTGCCTTATAAATTCTTGAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTCATTCTCAACAAGTaGCTCAGACATCTCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: FIQKGTICSCTKARYRTKFILNK*LRHLWW Trigger: CCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAA...CTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| 3UTR CCA 72 bp | AACCCCGAAGAGCATGCTTGCTGGCACAGTAGCCACTaGAAAGGGACACAGAGGCAATCCCCGCGATGCTGT | + |
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Preference number: 3 (lower is better) Translates to: NPEEHACWHSSH*KGTQRQSPRCC Trigger: ACAGCATCGCGGGGATTGCCTCTGTGTCCCTTTCCAGTGGCTACTGTGCCAGCAAGCATGCTCTTCGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR GCA 72 bp | CCATGCGGCCCAGGTTGGCATATACTGCCATATGTATaGCCCCAACAGCACAGGATGGTCAGAGATCCAGAC | + |
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Preference number: 3 (lower is better) Translates to: PCGPGWHILPYV*PQQHRMVRDPD Trigger: GTCTGGATCTCTGACCATCCTGTGCTGTTGGGGGCATACATATGGCAGTATATGCCAACCTGGGCCGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR TCA 72 bp | AGATCCAGACTTCCTTCAGATCATTGGCCATGGAGATaGGCATCAGCCGCACACAGCGGCTCGTTGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: RSRLPSDHWPWR*ASAAHSGSLAS Trigger: AGATGCCAACGAGCCGCTGTGTGCGGCTGATGCTCATCTCCATGGCCAATGATCTGAAGGAAGTCTGGATCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR TCA 72 bp | TGCCTGGATATTGGCCGAGCTCACTATGGAGGGCATTaGAAAAACCCCGAAGAGCATGCTTGCTGGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: CLDIGRAHYGGH*KNPEEHACWHS Trigger: ACTGTGCCAGCAAGCATGCTCTTCGGGGTTTTTTCAATGCCCTCCATAGTGAGCTCGGCCAATATCCAGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR GCA 72 bp | AGCCACTGGAAAGGGACACAGAGGCAATCCCCGCGATaGTGTTCACAGTCACAATCTTCCCTTGTTTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: SHWKGTQRQSPR*CSQSQSSLVSS Trigger: AGAGGAAACAAGGGAAGATTGTGACTGTGAACAGCATCGCGGGGATTGCCTCTGTGTCCCTTTCCAGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 72 bp | CATGGAGATGAGCATCAGCCGCACACAGCGGCTCGTTaGCATCTTGTAACTCTGGTCTATGTTGTTTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: HGDEHQPHTAAR*HLVTLVYVVSH Trigger: ATGAGAAACAACATAGACCAGAGTTACAAGATGCCAACGAGCCGCTGTGTGCGGCTGATGCTCATCTCCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR TCA 72 bp | ACAGTCACAATCTTCCCTTGTTTCCTCTCTATCATGTaGGGCAGGACACACTTGGTCAAGGATACTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: TVTIFPCFLSIM*GRTHLVKDTVP Trigger: AGGGACAGTATCCTTGACCAAGTGTGTCCTGCCTCACATGATAGAGAGGAAACAAGGGAAGATTGTGACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 72 bp | CTTGTTTCCTCTCTATCATGTGAGGCAGGACACACTTaGTCAAGGATACTGTCCCTATGTAGTTCAGATTTA | + |
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Preference number: 3 (lower is better) Translates to: LVSSLSCEAGHT*SRILSLCSSDL Trigger: TAAATCTGAACTACATAGGGACAGTATCCTTGACCAAGTGTGTCCTGCCTCACATGATAGAGAGGAAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR GCA 72 bp | GCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTTaGCTTCAAGAATTTATAAGGCAAGTCTGGATCCAA | + |
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Preference number: 3 (lower is better) Translates to: AQTSLVVVSILL*LQEFIRQVWIQ Trigger: TTGGATCCAGACTTGCCTTATAAATTCTTGAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 72 bp | CTTACTGTACATACGCTGTTTTTCATTCTCAACAAGTaGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTC | + |
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Preference number: 3 (lower is better) Translates to: LTVHTLFFILNK*LRHLWWLFQSF Trigger: GAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAAAAACAGCGTATGTACAGTAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 72 bp | CTGTTTTTCATTCTCAACAAGTGGCTCAGACATCTCTaGTGGTTGTTTCAATCCTTCTTTGCCTTCAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: LFFILNKWLRHL*WLFQSFFAFKN Trigger: ATTCTTGAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAAAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR TCA 72 bp | ATACTGTCCCTATGTAGTTCAGATTTATCAGCTCCTTaGAGACATCCAAGTTGGTTTCTAGAACTAAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: ILSLCSSDLSAP*RHPSWFLELRN Trigger: GTTCCTTAGTTCTAGAAACCAACTTGGATGTCTTCAAGGAGCTGATAAATCTGAACTACATAGGGACAGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| 3UTR CCA 72 bp | TTTTTCATTCTCAACAAGTGGCTCAGACATCTCTGGTaGTTGTTTCAATCCTTCTTTGCCTTCAAGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: FFILNKWLRHLW*LFQSFFAFKNL Trigger: TAAATTCTTGAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| CDS-3UTR TCA 90 bp | CTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTTGCCTTCCTGCGCCCTTCGGGCTaGCAGCACCAGAGAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: LNKWLRHLWWLFQSFFAFLRPSG*QHQRDP Trigger: GGGGTCTCTCTGGTGCTGTCAGCCCGAAGGGCGCAG...GAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCCACTTGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| CDS-3UTR TCA 90 bp | TATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTCTGCGCCCTTCGGGCTaGCAGCACCAGAGAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: YSKRYHMLLYKGKIQDKVLRPSG*QHQRDP Trigger: GGGGTCTCTCTGGTGCTGTCAGCCCGAAGGGCGCAG...AACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | TACATACTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCTGCGCCCTTCGGGCTaGCAGCACCAGAGAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: YILNRKLYQKLNPKVVTGLRPSG*QHQRDP Trigger: GGGGTCTCTCTGGTGCTGTCAGCCCGAAGGGCGCAG...GCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAGTATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | TACATACGCTGTTTTTCATTCTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTGCTGGTGTTGGGAATTaGCTCACCCAGGCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: YIRCFSFSTSGSDISGGCAGVGN*LTQASS Trigger: AGAAGATGCCTGGGTGAGTCAATTCCCAACACCAGC...ACAACCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAAAAACAGCGTATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | CTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCTCCTGCAGAACGGCTTTGGTaGCTGCCTCATGGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: LNRKLYQKLNPKVVTGPPAERLW*LPHGNL Trigger: CAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGC...AGGAGGGCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTCATTGGCCATGGAGATaGGCATCAGCCGCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSHWPWR*ASAAHS Trigger: GCTGTGTGCGGCTGATGCTCATCTCCATGGCCAATG...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR GCA 90 bp | TACATACGCTGTTTTTCATTCTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTAACGGCTTTGGTGGCTaGCTCATGGGAACTTGTATC | + |
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Preference number: 4 (lower is better) Translates to: YIRCFSFSTSGSDISGGCNGFGG*LMGTCI Trigger: GATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTT...ACAACCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAAAAACAGCGTATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | TACATACGCTGTTTTTCATTCTCAACAAGTGGCTCAGACATCTCTGGTGGTTGTGAAGAGCATGCTTGCTaGCACAGTAGCCACTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: YIRCFSFSTSGSDISGGCEEHAC*HSSHWK Trigger: TTTCCAGTGGCTACTGTGCCAGCAAGCATGCTCTTC...ACAACCACCAGAGATGTCTGAGCCACTTGTTGAGAATGAAAAACAGCGTATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | TTTATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGCATTGGCCATGGAGATaGGCATCAGCCGCACACAGC | + |
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Preference number: 4 (lower is better) Translates to: FIQKGTICSCTKARYRTKHWPWR*ASAAHS Trigger: GCTGTGTGCGGCTGATGCTCATCTCCATGGCCAATG...CTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR GCA 90 bp | TACATACTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCCGAAGAGCATGCTTaGTGGCACAGTAGCCACTGG | + |
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Preference number: 4 (lower is better) Translates to: YILNRKLYQKLNPKVVTGPEEHA*WHSSHW Trigger: CCAGTGGCTACTGTGCCAGCAAGCATGCTCTTCGGG...GCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAGTATGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTGCAGAACGGCTTTGGTaGCTGCCTCATGGGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSAERLW*LPHGNL Trigger: CAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGC...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTCTTCCAAAGCTGCGCTaGGTTTGGATTCTCGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSLPKLR*VWILAA Trigger: AGCAGCGAGAATCCAAACTCAGCGCAGCTTTGGAAG...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | AATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCTCCTTCTTTGGTGGCTGCCTCATaGGAACTTGTATCGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRKLYQKLNPKVVTGPPSLVAAS*ELVSVK Trigger: CTTGACCGATACAAGTTCCCATGAGGCAGCCACCAA...AGAAGGAGGGCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| 3UTR CAA 72 bp | GGCTCAGACATCTCTGGTGGTTGTTTCAATCCTTCTTaGCCTTCAAGAATTTATAAGGCAAGTCTGGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSDISGGCFNPS*PSRIYKASLDP Trigger: TGGATCCAGACTTGCCTTATAAATTCTTGAAGGCAAAGAAGGATTGAAACAACCACCAGAGATGTCTGAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220821.2 |
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| CDS-3UTR GCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTAACGGCTTTGGTGGCTaGCTCATGGGAACTTGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSNGFGG*LMGTCI Trigger: GATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTT...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | TTTATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTGGCACAGTAGCCACTaGAAAGGGACACAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FIQKGTICSCTKARYRTKWHSSH*KGTQRQ Trigger: TTGCCTCTGTGTCCCTTTCCAGTGGCTACTGTGCCA...CTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | TATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTGGCACAGTAGCCACTaGAAAGGGACACAGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSKRYHMLLYKGKIQDKVWHSSH*KGTQRQ Trigger: TTGCCTCTGTGTCCCTTTCCAGTGGCTACTGTGCCA...AACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTGAAGAGCATGCTTGCTaGCACAGTAGCCACTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSEEHAC*HSSHWK Trigger: TTTCCAGTGGCTACTGTGCCAGCAAGCATGCTCTTC...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTCACTATGGAGGGCATTaGAAAAACCCCGAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSHYGGH*KNPEEH Trigger: ATGCTCTTCGGGGTTTTTTCAATGCCCTCCATAGTG...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | TTTATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTGGTGGCTGCCTCATaGGAACTTGTATCGGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FIQKGTICSCTKARYRTKLVAAS*ELVSVK Trigger: CTTGACCGATACAAGTTCCCATGAGGCAGCCACCAA...CTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CCA 90 bp | TATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTGAGGCAGGACACACTTaGTCAAGGATACTGTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: YSKRYHMLLYKGKIQDKVEAGHT*SRILSL Trigger: TAGGGACAGTATCCTTGACCAAGTGTGTCCTGCCTC...AACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | CTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCTCCTGATTTATCAGCTCCTTaGAGACATCCAAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNRKLYQKLNPKVVTGPPDLSAP*RHPSWF Trigger: AAACCAACTTGGATGTCTTCAAGGAGCTGATAAATC...AGGAGGGCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | TATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTCACTATGGAGGGCATTaGAAAAACCCCGAAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YSKRYHMLLYKGKIQDKVHYGGH*KNPEEH Trigger: ATGCTCTTCGGGGTTTTTTCAATGCCCTCCATAGTG...AACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR GCA 90 bp | TTTATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGATTTTACCAAACTCCTaGAGAACGGCTTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FIQKGTICSCTKARYRTKILPNS*RTALVA Trigger: AGCCACCAAAGCCGTTCTGCAGGAGTTTGGTAAAAT...CTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR GCA 90 bp | TATTCAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTATTTTACCAAACTCCTaGAGAACGGCTTTGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YSKRYHMLLYKGKIQDKVILPNS*RTALVA Trigger: AGCCACCAAAGCCGTTCTGCAGGAGTTTGGTAAAAT...AACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR TCA 90 bp | CAAAAAGGTACCATATGCTCTTGTACAAAGGCAAGATACAGGACAAAGTTTTCTGATTTATCAGCTCCTTaGAGACATCCAAGTTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKGTICSCTKARYRTKFSDLSAP*RHPSWF Trigger: AAACCAACTTGGATGTCTTCAAGGAGCTGATAAATC...AGAAAACTTTGTCCTGTATCTTGCCTTTGTACAAGAGCATATGGTACCTTTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS CCA 90 bp | GCCCTTCGGGCTGACAGCACCAGAGAGACCCCGAGTTTAGATAACTaGAAAGCTAGCTCCTCGCCAATGCCACTTGACGCTCCAGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: ALRADSTRETPSLDN*KASSSPMPLDAPVT Trigger: GGTTACTGGAGCGTCAAGTGGCATTGGCGAGGAGCTAGCTTTCCAGTTATCTAAACTCGGGGTCTCTCTGGTGCTGTCAGCCCGAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| CDS CCA 90 bp | TCTTCCCTGACTTCCAAAGCTGCGCTGAGTTTGGATTCTCGCTGCTaGGAAGCACGGCTGGTGTTGGGAATTGACTCACCCAGGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLTSKAALSLDSRC*EARLVLGIDSPRHL Trigger: AAGATGCCTGGGTGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAATCCAAACTCAGCGCAGCTTTGGAAGTCAGGGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS GCA 90 bp | TTTTCTTCCCTGACTTCCAAAGCTGCGCTGAGTTTGGATTCTCGCTaGTGGGAAGCACGGCTGGTGTTGGGAATTGACTCACCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FSSLTSKAALSLDSR*WEARLVLGIDSPRH Trigger: ATGCCTGGGTGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAATCCAAACTCAGCGCAGCTTTGGAAGTCAGGGAAGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS CCA 90 bp | TCAATTTTACCAAACTCCTGCAGAACGGCTTTGGTGGCTGCCTCATaGGAACTTGTATCGGTCAAGTCAAGGGGCAGAACCAGTATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SILPNSCRTALVAAS*ELVSVKSRGRTSIS Trigger: AGATATACTGGTTCTGCCCCTTGACTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGGAGTTTGGTAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS TCA 90 bp | AGTTGGTTTCTAGAACTAAGGAACGCTGGCTTCTTCCACCGTTGTTaGCCAAAATGTCAATTTTACCAAACTCCTGCAGAACGGCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWFLELRNAGFFHRC*PKCQFYQTPAERLW Trigger: CCAAAGCCGTTCTGCAGGAGTTTGGTAAAATTGACATTTTGGTCAACAACGGTGGAAGAAGCCAGCGTTCCTTAGTTCTAGAAACCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CAA 90 bp | TACATACTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCTTTCCTTCCCCAACTaGCAGTTTAGCCATGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: YILNRKLYQKLNPKVVTGLSFPN*QFSHAA Trigger: GGCCGCATGGCTAAACTGCAAGTTGGGGAAGGAAAG...GCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAGTATGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS CCA 90 bp | AGCTCCTTGAAGACATCCAAGTTGGTTTCTAGAACTAAGGAACGCTaGCTTCTTCCACCGTTGTTGACCAAAATGTCAATTTTACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSLKTSKLVSRTKER*LLPPLLTKMSILPN Trigger: GTTTGGTAAAATTGACATTTTGGTCAACAACGGTGGAAGAAGCCAGCGTTCCTTAGTTCTAGAAACCAACTTGGATGTCTTCAAGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CAA 90 bp | AATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCTCCTTCTACTTCCTTCAGATCATaGGCCATGGAGATGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: NRKLYQKLNPKVVTGPPSTSFRS*AMEMSI Trigger: GATGCTCATCTCCATGGCCAATGATCTGAAGGAAGT...AGAAGGAGGGCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CAA 90 bp | CTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCCCTCCTAGTCACAATCTTCCCTaGTTTCCTCTCTATCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LNRKLYQKLNPKVVTGPPSHNLP*FPLYHV Trigger: CACATGATAGAGAGGAAACAAGGGAAGATTGTGACT...AGGAGGGCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CAA 90 bp | TACATACTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCACTTCCTTCAGATCATaGGCCATGGAGATGAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: YILNRKLYQKLNPKVVTGTSFRS*AMEMSI Trigger: GATGCTCATCTCCATGGCCAATGATCTGAAGGAAGT...GCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAGTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS-3UTR CAA 90 bp | TACATACTGAATAGAAAGTTGTATCAAAAATTAAACCCGAAAGTAGTCACCGGCAGTCACAATCTTCCCTaGTTTCCTCTCTATCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: YILNRKLYQKLNPKVVTGSHNLP*FPLYHV Trigger: CACATGATAGAGAGGAAACAAGGGAAGATTGTGACT...GCCGGTGACTACTTTCGGGTTTAATTTTTGATACAACTTTCTATTCAGTATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS GCA 72 bp | GTCAGGTCCGCATCCGCCCGCAAAAAGCGCAAGAGCTaGACAAGGGGCAGGATCAGCGCGCACAGCGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VRSASARKKRKS*TRGRISAHSAS Trigger: GCTGGCGCTGTGCGCGCTGATCCTGCCCCTTGTGCAGCTCTTGCGCTTTTTGCGGGCGGATGCGGACCTGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| CDS GCA 72 bp | ACCATGTCAGTCAGCTCCCATTCTGGGCGTCGCCCTTaGCATTCAGCCCACAACAAGGTCAGGTCCGCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TMSVSSHSGRRP*HSAHNKVRSAS Trigger: GGATGCGGACCTGACCTTGTTGTGGGCTGAATGGCAAGGGCGACGCCCAGAATGGGAGCTGACTGACATGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| CDS CAA 72 bp | CACCATGTCAGTCAGCTCCCATTCTGGGCGTCGCCCTaGCCATTCAGCCCACAACAAGGTCAGGTCCGCATC | + |
|
Preference number: 6 (lower is better) Translates to: HHVSQLPFWASP*PFSPQQGQVRI Trigger: GATGCGGACCTGACCTTGTTGTGGGCTGAATGGCAAGGGCGACGCCCAGAATGGGAGCTGACTGACATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| CDS CAA 90 bp | GCTGCGCTGAGTTTGGATTCTCGCTGCTGGGAAGCACGGCTGGTGTaGGGAATTGACTCACCCAGGCATCTTCTCTTCACCCGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AALSLDSRCWEARLV*GIDSPRHLLFTRSS Trigger: GCTGGAGCGGGTGAAGAGAAGATGCCTGGGTGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAATCCAAACTCAGCGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS TCA 72 bp | TTCTCGCTGCTGGGAAGCACGGCTGGTGTTGGGAATTaGCTCACCCAGGCATCTTCTCTTCACCCGCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSLLGSTAGVGN*LTQASSLHPLQ Trigger: CTGGAGCGGGTGAAGAGAAGATGCCTGGGTGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS CAA 72 bp | ATTCTCGCTGCTGGGAAGCACGGCTGGTGTTGGGAATaGACTCACCCAGGCATCTTCTCTTCACCCGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ILAAGKHGWCWE*THPGIFSSPAP Trigger: TGGAGCGGGTGAAGAGAAGATGCCTGGGTGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS CCA 72 bp | CCAAACTCCTGCAGAACGGCTTTGGTGGCTGCCTCATaGGAACTTGTATCGGTCAAGTCAAGGGGCAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: PNSCRTALVAAS*ELVSVKSRGRT Trigger: GGTTCTGCCCCTTGACTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGGAGTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS CCA 72 bp | GTTTGGATTCTCGCTGCTGGGAAGCACGGCTGGTGTTaGGAATTGACTCACCCAGGCATCTTCTCTTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: VWILAAGKHGWC*ELTHPGIFSSP Trigger: GGGTGAAGAGAAGATGCCTGGGTGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAATCCAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS GCA 72 bp | CTGACTTCCAAAGCTGCGCTGAGTTTGGATTCTCGCTaGTGGGAAGCACGGCTGGTGTTGGGAATTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LTSKAALSLDSR*WEARLVLGIDS Trigger: TGAGTCAATTCCCAACACCAGCCGTGCTTCCCAGCAGCGAGAATCCAAACTCAGCGCAGCTTTGGAAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS CCA 72 bp | GCTGACAGCACCAGAGAGACCCCGAGTTTAGATAACTaGAAAGCTAGCTCCTCGCCAATGCCACTTGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: ADSTRETPSLDN*KASSSPMPLDA Trigger: AGCGTCAAGTGGCATTGGCGAGGAGCTAGCTTTCCAGTTATCTAAACTCGGGGTCTCTCTGGTGCTGTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021512.11 ENSMUST00000220821.2 ENSMUST00000221750.2 |
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| CDS CAA 72 bp | CCATTTTCTTCCCTGACTTCCAAAGCTGCGCTGAGTTaGGATTCTCGCTGCTGGGAAGCACGGCTGGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PFSSLTSKAALS*DSRCWEARLVL Trigger: CAACACCAGCCGTGCTTCCCAGCAGCGAGAATCCAAACTCAGCGCAGCTTTGGAAGTCAGGGAAGAAAATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221750.2 |
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| CDS CAA 72 bp | CCTGCAGAACGGCTTTGGTGGCTGCCTCATGGGAACTaGTATCGGTCAAGTCAAGGGGCAGAACCAGTATAT | + |
|
Preference number: 6 (lower is better) Translates to: PAERLWWLPHGN*YRSSQGAEPVY Trigger: ATATACTGGTTCTGCCCCTTGACTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS GCA 72 bp | AATTTTACCAAACTCCTGCAGAACGGCTTTGGTGGCTaGCTCATGGGAACTTGTATCGGTCAAGTCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: NFTKLLQNGFGG*LMGTCIGQVKG Trigger: CCCCTTGACTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGGAGTTTGGTAAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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| CDS CAA 90 bp | TACCAAACTCCTGCAGAACGGCTTTGGTGGCTGCCTCATGGGAACTaGTATCGGTCAAGTCAAGGGGCAGAACCAGTATATCTTTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YQTPAERLWWLPHGN*YRSSQGAEPVYLFL Trigger: AAGAAAAAGATATACTGGTTCTGCCCCTTGACTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGGAGTTTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
||
| CDS CCA 72 bp | AAATGTCAATTTTACCAAACTCCTGCAGAACGGCTTTaGTGGCTGCCTCATGGGAACTTGTATCGGTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: KCQFYQTPAERL*WLPHGNLYRSS Trigger: ACTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGGAGTTTGGTAAAATTGACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
||
| CDS CAA 72 bp | AAAATGTCAATTTTACCAAACTCCTGCAGAACGGCTTaGGTGGCTGCCTCATGGGAACTTGTATCGGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: KMSILPNSCRTA*VAASWELVSVK Trigger: CTTGACCGATACAAGTTCCCATGAGGCAGCCACCAAAGCCGTTCTGCAGGAGTTTGGTAAAATTGACATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
||
| CDS CAA 90 bp | AAGTTGGTTTCTAGAACTAAGGAACGCTGGCTTCTTCCACCGTTGTaGACCAAAATGTCAATTTTACCAAACTCCTGCAGAACGGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KLVSRTKERWLLPPL*TKMSILPNSCRTAL Trigger: CAAAGCCGTTCTGCAGGAGTTTGGTAAAATTGACATTTTGGTCAACAACGGTGGAAGAAGCCAGCGTTCCTTAGTTCTAGAAACCAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
||
| CDS CAA 72 bp | GTTTCTAGAACTAAGGAACGCTGGCTTCTTCCACCGTaGTTGACCAAAATGTCAATTTTACCAAACTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSRTKERWLLPP*LTKMSILPNSC Trigger: GCAGGAGTTTGGTAAAATTGACATTTTGGTCAACAACGGTGGAAGAAGCCAGCGTTCCTTAGTTCTAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
||
| CDS CCA 72 bp | AAGACATCCAAGTTGGTTTCTAGAACTAAGGAACGCTaGCTTCTTCCACCGTTGTTGACCAAAATGTCAATT | + |
|
Preference number: 6 (lower is better) Translates to: KTSKLVSRTKER*LLPPLLTKMSI Trigger: AATTGACATTTTGGTCAACAACGGTGGAAGAAGCCAGCGTTCCTTAGTTCTAGAAACCAACTTGGATGTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021512.11 ENSMUST00000221750.2 |
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