Pregenerated sensors for DHRS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002332Ensembl transcript IDs: ENSMUST00000002403.10
Found 55 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCAATAAGACGAGGTTCTaGAAGGGCTGGGATGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPQNALDFLQPPSLHGEGNKTRF*KGWDGR Trigger: CCTGCCATCCCAGCCCTTCCAGAACCTCGTCTTATT...GCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGAAAAGGCACAAAGAACCTACCAGAGCCCCCAGAATGCACTAGACTTCCTACAGCCCCACCCACCTaGGCCTCAATAAGACGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: QGKGTKNLPEPPECTRLPTAPPT*ASIRRG Trigger: ACCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGT...AGGAAGTCTAGTGCATTCTGGGGGCTCTGGTAGGTTCTTTGTGCCTTTTCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGAAAAGGCACAAAGAACCTACCAGAGCCCCCAGAATGCACTAGACTTCCTACCTTCTCTTCATGGTaGGGGCATGAGTATGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: QGKGTKNLPEPPECTRLPTFSSW*GHEYVG Trigger: TCCCACATACTCATGCCCTCACCATGAAGAGAAGGT...AGGAAGTCTAGTGCATTCTGGGGGCTCTGGTAGGTTCTTTGTGCCTTTTCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR TCA 72 bp | AAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTaGGCCTCAATAAGACGAGGTTCTGGAAGGGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: KRVCSTKTAPPT*ASIRRGSGRAG Trigger: CCCAGCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR CCA 72 bp | CAGCCACCTTCTCTTCATGGTGAGGGCATGAGTATGTaGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: QPPSLHGEGMSM*ESGFVLPRQPH Trigger: GTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCCTCACCATGAAGAGAAGGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR GCA 72 bp | GGAAAAGGCACAAAGAACCTACCAGAGCCCCCAGAATaGACTAGACTTCCTGCAGCCACCTTCTCTTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: GKGTKNLPEPPE*TRLPAATFSSW Trigger: CCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCTCTGGTAGGTTCTTTGTGCCTTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR TCA 72 bp | ACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCATaGGTATGTGGGAAAGCGGGTTTGTTCTACCAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: TSCSHLLFMVRA*VCGKAGLFYQD Trigger: GTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| 3UTR TCA 72 bp | TGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTaGGGGCATGAGTATGTGGGAAAGCGGGTTTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: CTRLPAATFSSW*GHEYVGKRVCS Trigger: AGAACAAACCCGCTTTCCCACATACTCATGCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR GCA 90 bp | GAGGGCATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCAGCCCCCGAGGGACTGTaGCTCCTGGGCAGTAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EGMSMWESGFVLPRQPHPAPEGL*LLGSSS Trigger: AGAGCTACTGCCCAGGAGGCACAGTCCCTCGGGGGC...TGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | CTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCATGAGTATGTGGGAAGAGTCCTTTGCCAGCTaGCACCATCAGCCGTGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDFLQPPSLHGEGMSMWEESFAS*HHQPCP Trigger: GGGGCACGGCTGATGGTGCCAGCTGGCAAAGGACTC...TTCCCACATACTCATGCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | GCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTGAGCCTCAATAAGACGAGGTCAGCCATCCCAGGCTaGAGACTTGTGAGAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLFYQDSPTHLSLNKTRSAIPG*RLVRGH Trigger: ATGCCCTCTCACAAGTCTCCAGCCTGGGATGGCTGA...CCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR GCA 90 bp | CCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCTGGGATGGCAGGAGGCCACCACACACTTaGCACTCATTTCTGGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTHLSLNKTRFWKGWDGRRPPHT*HSFLDF Trigger: AAAGTCCAGAAATGAGTGGCAAGTGTGTGGTGGCCT...CCTGCCATCCCAGCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | ATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTGAGCACGGCCAATACCCCTaGAGGCACCAGTTACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MSMWESGFVLPRQPHPPEHGQYP*RHQLPH Trigger: GTGTGGTAACTGGTGCCTCCAGGGGTATTGGCCGTG...CTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCATGTGTTTGCACCAGCCCTaGCCACAGAGACACGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQNALDFLQPPSLHGEGMCLHQP*PQRHVA Trigger: AGCTACGTGTCTCTGTGGCCAGGGCTGGTGCAAACA...CATGCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGTTCACTCTCCTGGCTTaGATCACACACCACGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPQNALDFLQPPSLHGEFTLLA*ITHHGY Trigger: GTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAA...CTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR TCA 90 bp | TACCAAGACAGCCCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCCAGCATAGGCATTATTaGCCAGAACATCTAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YQDSPTHLSLNKTRFWKGQHRHY*PEHLAA Trigger: GGCGGCTAGATGTTCTGGTCAATAATGCCTATGCTG...GCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGTCTTGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGCACCATAAGGGACATTaGACATATGCTGCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPQNALDFLQPPSLHGEHHKGH*TYAAAP Trigger: GGGGGCTGCAGCATATGTTCAATGTCCCTTATGGTG...CTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR GCA 90 bp | CCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCTGGGATGGCAGGTGTTCCCGATCTACTTaGTCGAACAGGCTTTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: PTHLSLNKTRFWKGWDGRCSRST*SNRLFT Trigger: AGTGAAAAGCCTGTTCGAGCAAGTAGATCGGGAACA...CCTGCCATCCCAGCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR GCA 90 bp | AGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCTTCACCATTTCTGTTTaGACCAGCCCTGGCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPQNALDFLQPPSLHGEGFTISV*TSPGHR Trigger: TCTGTGGCCAGGGCTGGTGCAAACAGAAATGGTGAA...GCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | CAGAGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGTTACCACACACACTTaGCCCTTCATAGGCGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: QSPQNALDFLQPPSLHGEVTTHT*PFIGAT Trigger: GGTAGCGCCTATGAAGGGCCAAGTGTGTGTGGTAAC...CTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | ATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTGAGAGGGACTGTGCCTCCTaGGCAGTAGCTCTAAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: MSMWESGFVLPRQPHPPERDCAS*AVALSV Trigger: TACGCTTAGAGCTACTGCCCAGGAGGCACAGTCCCT...CTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR GCA 90 bp | ATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTGAGAAAGCTGTAAGGCAATaGCACGGCCAATACCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSMWESGFVLPRQPHPPEKAVRQ*HGQYPW Trigger: CCAGGGGTATTGGCCGTGGCATTGCCTTACAGCTTT...CTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | TACCAAGACAGCCCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCTTATGTCATCCCAAATaGAGGCAGGCACTTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YQDSPTHLSLNKTRFWKGLCHPK*RQALPR Trigger: TCTGGGAAGTGCCTGCCTCCATTTGGGATGACATAA...GCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGTCTTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | GCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTGAGCCTCAATAAGACGAGGTCAAGTTCAGGATATTaGGGTCTGTTGCCAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGLFYQDSPTHLSLNKTRSSSGY*GLLPRP Trigger: TGGCCTTGGCAACAGACCCCAATATCCTGAACTTGA...CCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR GCA 90 bp | ATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACCTGAGCTGTGGCACCTGCTTTaGAAAGCTGTAAGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: MSMWESGFVLPRQPHPPELWHLL*KAVRQC Trigger: GCATTGCCTTACAGCTTTGCAAAGCAGGTGCCACAG...CTCAGGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | GAGGGCATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCATTCACTTCACTCTCCTaGCTTGAATCACACACCACG | + |
|
Preference number: 4 (lower is better) Translates to: EGMSMWESGFVLPRQPHPFTSLS*LESHTT Trigger: CGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAA...TGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CCA 90 bp | GGGCATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACCAGAAAGACTTGTTGGTaGTGTTCAGGATTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHEYVGKRVCSTKTAPPTRKTCW*CSGLPG Trigger: TCCAGGCAATCCTGAACACCACCAACAAGTCTTTCT...GGTGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS TCA 90 bp | CCGATCTACTTGCTCGAACAGGCTTTTCACTTCACTCTCCTGGCTTaGATCACACACCACGGGTACACACCGGCCCCCGAGGGACTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PIYLLEQAFHFTLLA*ITHHGYTPAPEGLC Trigger: GCACAGTCCCTCGGGGGCCGGTGTGTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAAGTAGATCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CCA 90 bp | TGTTCCCGATCTACTTGCTCGAACAGGCTTTTCACTTCACTCTCCTaGCTTGAATCACACACCACGGGTACACACCGGCCCCCGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: CSRSTCSNRLFTSLS*LESHTTGTHRPPRD Trigger: GTCCCTCGGGGGCCGGTGTGTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAAGTAGATCGGGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | CCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCTGGGATGGCAGGTCCCAGAAAGACTTGTaGGTGGTGTTCAGGATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PTHLSLNKTRFWKGWDGRSQKDL*VVFRIA Trigger: GGCAATCCTGAACACCACCAACAAGTCTTTCTGGGA...CCTGCCATCCCAGCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | AGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCCTTCACCATTTCTGTTaGCACCAGCCCTGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SPQNALDFLQPPSLHGEGLHHFC*HQPWPQ Trigger: CTGTGGCCAGGGCTGGTGCAAACAGAAATGGTGAAG...GCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | CCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCTGGGATGGCAGGAAGGCCACCACACACTaGCCACTCATTTCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: PTHLSLNKTRFWKGWDGRKATTH*PLISGL Trigger: AAGTCCAGAAATGAGTGGCAAGTGTGTGGTGGCCTT...CCTGCCATCCCAGCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | TACCAAGACAGCCCCACCCACCTGAGCCTCAATAAGACGAGGTTCTGGAAGGGCAGTTACCACACACACTaGGCCCTTCATAGGCGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: YQDSPTHLSLNKTRFWKGSYHTH*ALHRRY Trigger: GTAGCGCCTATGAAGGGCCAAGTGTGTGTGGTAACT...GCCCTTCCAGAACCTCGTCTTATTGAGGCTCAGGTGGGTGGGGCTGTCTTGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | GAGGGCATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCACTTCACTCTCCTGGCTaGAATCACACACCACGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: EGMSMWESGFVLPRQPHPLHSPG*NHTPRV Trigger: TACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAG...TGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGGGCATGCTCAAGTTCAGGATATaGGGGTCTGTTGCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PQNALDFLQPPSLHGEGMLKFRI*GSVAKA Trigger: GGCCTTGGCAACAGACCCCAATATCCTGAACTTGAG...CATGCCCTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | GAGGGCATGAGTATGTGGGAAAGCGGGTTTGTTCTACCAAGACAGCCCCACCCAACTGTGGCACCTGCTTaGCAAAGCTGTAAGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EGMSMWESGFVLPRQPHPTVAPA*QSCKAM Trigger: CATTGCCTTACAGCTTTGCAAAGCAGGTGCCACAGT...TGGGTGGGGCTGTCTTGGTAGAACAAACCCGCTTTCCCACATACTCATGCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | CAGAGCCCCCAGAATGCACTAGACTTCCTGCAGCCACCTTCTCTTCATGGTGAGCTGTTCCCGATCTACTaGCTCGAACAGGCTTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: QSPQNALDFLQPPSLHGELFPIY*LEQAFH Trigger: GTGAAAAGCCTGTTCGAGCAAGTAGATCGGGAACAG...CTCACCATGAAGAGAAGGTGGCTGCAGGAAGTCTAGTGCATTCTGGGGGCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS GCA 90 bp | TTATTGACCAGAACATCTAGCCGCCCTTTCTGTTCCCGATCTACTTaGTCGAACAGGCTTTTCACTTCACTCTCCTGGCTTGAATCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LLTRTSSRPFCSRST*SNRLFTSLSWLESH Trigger: GTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAAGTAGATCGGGAACAGAAAGGGCGGCTAGATGTTCTGGTCAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS-3UTR CAA 90 bp | CAGGGAAAAGGCACAAAGAACCTACCAGAGCCCCCAGAATGCACTAGACTTCCTCCTCTGAGTCCAACATaGTTTATGTCATCCCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: QGKGTKNLPEPPECTRLPPLSPT*FMSSQM Trigger: CATTTGGGATGACATAAACAATGTTGGACTCAGAGG...AGGAAGTCTAGTGCATTCTGGGGGCTCTGGTAGGTTCTTTGTGCCTTTTCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS GCA 72 bp | ACACACCACGGGTACACACCGGCCCCCGAGGGACTGTaGCTCCTGGGCAGTAGCTCTAAGCGTATCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: THHGYTPAPEGL*LLGSSSKRIQM Trigger: CATCTGGATACGCTTAGAGCTACTGCCCAGGAGGCACAGTCCCTCGGGGGCCGGTGTGTACCCGTGGTGTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CAA 90 bp | CCCGATCTACTTGCTCGAACAGGCTTTTCACTTCACTCTCCTGGCTaGAATCACACACCACGGGTACACACCGGCCCCCGAGGGACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PDLLARTGFSLHSPG*NHTPRVHTGPRGTV Trigger: CACAGTCCCTCGGGGGCCGGTGTGTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAAGTAGATCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS TCA 72 bp | TTGCTCGAACAGGCTTTTCACTTCACTCTCCTGGCTTaGATCACACACCACGGGTACACACCGGCCCCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: LLEQAFHFTLLA*ITHHGYTPAPE Trigger: CTCGGGGGCCGGTGTGTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CAA 72 bp | CTTGCTCGAACAGGCTTTTCACTTCACTCTCCTGGCTaGAATCACACACCACGGGTACACACCGGCCCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: LARTGFSLHSPG*NHTPRVHTGPR Trigger: TCGGGGGCCGGTGTGTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CCA 72 bp | TGCAAAGCTGTAAGGCAATGCCACGGCCAATACCCCTaGAGGCACCAGTTACCACACACACTTGGCCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CKAVRQCHGQYP*RHQLPHTLGPS Trigger: TGAAGGGCCAAGTGTGTGTGGTAACTGGTGCCTCCAGGGGTATTGGCCGTGGCATTGCCTTACAGCTTTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CCA 72 bp | CCCAAATGGAGGCAGGCACTTCCCAGAAAGACTTGTTaGTGGTGTTCAGGATTGCCTGGACGCCAGCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: PKWRQALPRKTC*WCSGLPGRQHR Trigger: CCTATGCTGGCGTCCAGGCAATCCTGAACACCACCAACAAGTCTTTCTGGGAAGTGCCTGCCTCCATTTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CCA 72 bp | CATAAACTCCTTCACCATTTCTGTTTGCACCAGCCCTaGCCACAGAGACACGTAGCTGACTCCGTGACGCCG | + |
|
Preference number: 6 (lower is better) Translates to: HKLLHHFCLHQP*PQRHVADSVTP Trigger: CGGCGTCACGGAGTCAGCTACGTGTCTCTGTGGCCAGGGCTGGTGCAAACAGAAATGGTGAAGGAGTTTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS GCA 72 bp | AAACTGTGGCACCTGCTTTGCAAAGCTGTAAGGCAATaGCACGGCCAATACCCCTGGAGGCACCAGTTACCA | + |
|
Preference number: 6 (lower is better) Translates to: KLWHLLCKAVRQ*HGQYPWRHQLP Trigger: TGGTAACTGGTGCCTCCAGGGGTATTGGCCGTGGCATTGCCTTACAGCTTTGCAAAGCAGGTGCCACAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CCA 72 bp | TCTACTTGCTCGAACAGGCTTTTCACTTCACTCTCCTaGCTTGAATCACACACCACGGGTACACACCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: STCSNRLFTSLS*LESHTTGTHRP Trigger: GGGCCGGTGTGTACCCGTGGTGTGTGATTCAAGCCAGGAGAGTGAAGTGAAAAGCCTGTTCGAGCAAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CAA 72 bp | TCATCCCAAATGGAGGCAGGCACTTCCCAGAAAGACTaGTTGGTGGTGTTCAGGATTGCCTGGACGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSQMEAGTSQKD*LVVFRIAWTPA Trigger: TGCTGGCGTCCAGGCAATCCTGAACACCACCAACAAGTCTTTCTGGGAAGTGCCTGCCTCCATTTGGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CCA 72 bp | AAATGGAGGCAGGCACTTCCCAGAAAGACTTGTTGGTaGTGTTCAGGATTGCCTGGACGCCAGCATAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: KWRQALPRKTCW*CSGLPGRQHRH Trigger: ATGCCTATGCTGGCGTCCAGGCAATCCTGAACACCACCAACAAGTCTTTCTGGGAAGTGCCTGCCTCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS TCA 72 bp | GCCGTGCCCCATACACAGAGCATAAGTAGTGGCCTCTaGGTCCAACATTGTTTATGTCATCCCAAATGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVPHTQSISSGL*VQHCLCHPKWR Trigger: CCTCCATTTGGGATGACATAAACAATGTTGGACTCAGAGGCCACTACTTATGCTCTGTGTATGGGGCACGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS GCA 72 bp | CACTTCCCAGAAAGACTTGTTGGTGGTGTTCAGGATTaGCTGGACGCCAGCATAGGCATTATTGACCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: HFPERLVGGVQD*LDASIGIIDQN Trigger: GTTCTGGTCAATAATGCCTATGCTGGCGTCCAGGCAATCCTGAACACCACCAACAAGTCTTTCTGGGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CAA 72 bp | ATCCTCTTTTGCCATAAACTCCTTCACCATTTCTGTTaGCACCAGCCCTGGCCACAGAGACACGTAGCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ILFCHKLLHHFC*HQPWPQRHVAD Trigger: GTCAGCTACGTGTCTCTGTGGCCAGGGCTGGTGCAAACAGAAATGGTGAAGGAGTTTATGGCAAAAGAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CAA 72 bp | AGGATATTGGGGTCTGTTGCCAAGGCCACCACACACTaGCCACTCATTTCTGGACTTTCGGCTGATGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RILGSVAKATTH*PLISGLSADEK Trigger: TTTCTCATCAGCCGAAAGTCCAGAAATGAGTGGCAAGTGTGTGGTGGCCTTGGCAACAGACCCCAATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||
| CDS CAA 90 bp | CTCAAGTTCAGGATATTGGGGTCTGTTGCCAAGGCCACCACACACTaGCCACTCATTTCTGGACTTTCGGCTGATGAGAAATCTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LKFRILGSVAKATTH*PLISGLSADEKSGF Trigger: GAAACCAGATTTCTCATCAGCCGAAAGTCCAGAAATGAGTGGCAAGTGTGTGGTGGCCTTGGCAACAGACCCCAATATCCTGAACTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002403.10 |
||