Pregenerated sensors for DDIAS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030641Ensembl transcript IDs: ENSMUST00000032877.11, ENSMUST00000208356.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCATGCTCTCTGTATCAGTaGAAGCAAACATTTCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSCSLYQ*KQTFPN Trigger: GTTTGGAAATGTTTGCTTTCACTGATACAGAGAGCA...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAGCCATGGTGGAAACCTTGAAAGATCCAACAGCATTCAGTACAGTCCACGAGCACTTTTGGTTTTaGAACTATAGGTATAGTCTT | + |
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Preference number: 2 (lower is better) Translates to: KKAMVETLKDPTAFSTVHEHFWF*NYRYSL Trigger: AAGACTATACCTATAGTTGCAAAACCAAAAGTGCTC...GTGGACTGTACTGAATGCTGTTGGATCTTTCAAGGTTTCCACCATGGCTTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| 3UTR-3UTR CCA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCATGCTTTGAGCACTTTTaGTTTTGCAACTATAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSCFEHF*FCNYRY Trigger: ATACCTATAGTTGCAAAACCAAAAGTGCTCAAAGCA...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGACCTTCAGTTACTAAGTaGTTTTTGTATCAGACACTA | + |
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Preference number: 2 (lower is better) Translates to: SVKANISKQICHHLKFLGPSVTK*FLYQTL Trigger: TAGTGTCTGATACAAAAAGCACTTAGTAACTGAAGG...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| 3UTR TCA 72 bp | TGCCATCACTTAAAATTTCTGGGAACTGGGTTCATGTaGCTTTATATGAAAATACCTTCAGTTACTAAGTGC | + |
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Preference number: 3 (lower is better) Translates to: CHHLKFLGTGFM*LYMKIPSVTKC Trigger: GCACTTAGTAACTGAAGGTATTTTCATATAAAGTCACATGAACCCAGTTCCCAGAAATTTTAAGTGATGGCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | AAGAAAGCCATGGTGGAAACCTTGAAAGATCCAACAGCATTCAGTACAGTCCACTTGAGCAGGCTGAGGTaGCTTCATACTGGCCAGTTA | + |
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Preference number: 4 (lower is better) Translates to: KKAMVETLKDPTAFSTVHLSRLR*LHTGQL Trigger: TAACTGGCCAGTATGAAGCCACCTCAGCCTGCTCAA...GTGGACTGTACTGAATGCTGTTGGATCTTTCAAGGTTTCCACCATGGCTTTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | AAGAAAGCCATGGTGGAAACCTTGAAAGATCCAACAGCATTCAGTACAGTCCACCTGGACAGCAAGTACTaGGGCAAAAAGGAATTTCCG | + |
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Preference number: 4 (lower is better) Translates to: KKAMVETLKDPTAFSTVHLDSKY*GKKEFP Trigger: CGGAAATTCCTTTTTGCCTCAGTACTTGCTGTCCAG...GTGGACTGTACTGAATGCTGTTGGATCTTTCAAGGTTTCCACCATGGCTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCCTGAGTCATCTGAAGTaGGTGACTGGCTGCTATGTT | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSLSHLK*VTGCYV Trigger: AACATAGCAGCCAGTCACTCACTTCAGATGACTCAG...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | AAGAAAGCCATGGTGGAAACCTTGAAAGATCCAACAGCATTCAGTACAGTCCACGAGTACCACTGGCCATaGTTTGTTTTGATGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KKAMVETLKDPTAFSTVHEYHWP*FVLMLE Trigger: TTCCAGCATCAAAACAAATCATGGCCAGTGGTACTC...GTGGACTGTACTGAATGCTGTTGGATCTTTCAAGGTTTCCACCATGGCTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCAGGCTCCATAAACTCTaGAGGGAATCATGGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSRLHKL*RESWQF Trigger: GAACTGCCATGATTCCCTTCAGAGTTTATGGAGCCT...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | AAGAAAGCCATGGTGGAAACCTTGAAAGATCCAACAGCATTCAGTACAGTCCACCTAGGCAGAATAATCTaGGAAGCTACAAGTGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KKAMVETLKDPTAFSTVHLGRII*EATSVL Trigger: CAGGACACTTGTAGCTTCCCAGATTATTCTGCCTAG...GTGGACTGTACTGAATGCTGTTGGATCTTTCAAGGTTTCCACCATGGCTTTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGTGGTCAGTAGGCTCTaGGTTCTACCACTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSVKANISKQICHHLKFLVVSRL*VLPLSR Trigger: CCTGGACAGTGGTAGAACTCAGAGCCTACTGACCAC...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCACTTTTCTACTGCTGTaGTCAGTAGGCTCTGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSTFLLL*SVGSEF Trigger: GAACTCAGAGCCTACTGACCACAGCAGTAGAAAAGT...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | CAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAAACATAAAGACTCTGAAGTGAGTGACTaGCTGCTATGTTCCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: QYSPLLLTTSCKSSKHKDSEVSD*LLCSWE Trigger: CTCCCAGGAACATAGCAGCCAGTCACTCACTTCAGA...GTCTTTATGTTTTGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCCCACTAGTCCTCTTTTaGGTAATGAAGGCTTCCCTA | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSPLVLF*VMKASL Trigger: TAGGGAAGCCTTCATTACCCAAAAGAGGACTAGTGG...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCGGCCATGATTTGTTTTaGTGCTGGAAAGTCATCACT | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSGHDLF*CWKVIT Trigger: AGTGATGACTTTCCAGCATCAAAACAAATCATGGCC...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCGGTACTGGGCCTGCATaGAATTTCATTCTTTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSGTGPA*NFILLL Trigger: CAACAAAAGAATGAAATTTCATGCAGGCCCAGTACC...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGATCCGACACTAGACTCTaGAAACCAGGATGTATTCCC | + |
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Preference number: 4 (lower is better) Translates to: SVKANISKQICHHLKFLGSDTRL*KPGCIP Trigger: GGGAATACATCCTGGTTTTCAGAGTCTAGTGTCGGA...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAATGGCTCCCAGAATCTaGAAAAATCCTCTCCGACAC | + |
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Preference number: 4 (lower is better) Translates to: SVKANISKQICHHLKFLGMAPRI*KNPLRH Trigger: GTGTCGGAGAGGATTTTTTCAGATTCTGGGAGCCAT...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | ATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGGCAGAAGACCTCTGTTaGAGGATGGGGGTAGTATTT | + |
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Preference number: 4 (lower is better) Translates to: ISESKHFQTDLPSLKISGAEDLC*RMGVVF Trigger: AAATACTACCCCCATCCTTCAACAGAGGTCTTCTGC...CCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAATTTCATTCTTTTGTTaGAAGACCCCACTAGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSISFFC*KTPLVL Trigger: GAGGACTAGTGGGGTCTTGCAACAAAAGAATGAAAT...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | CAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAAACATAAAGACAAGGAGTCAGAGTTCTaGGAAGGATTCGCTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: QYSPLLLTTSCKSSKHKDKESEF*EGFAVS Trigger: AGAAACAGCGAATCCTTCCCAGAACTCTGACTCCTT...GTCTTTATGTTTTGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | ATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGGCACCATTTAAGCCATaGATTCTTTGGTGGAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: ISESKHFQTDLPSLKISGAPFKP*ILWWKP Trigger: AGGCTTCCACCAAAGAATTCATGGCTTAAATGGTGC...CCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCATTGAGGTACTGGGCCTaGATGAAATTTCATTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSLRYWA*MKFHSF Trigger: AAAAGAATGAAATTTCATGCAGGCCCAGTACCTCAA...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAATAAAATTCCAATTCTaGACAGCAAGTACTGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSIKFQF*TASTEA Trigger: TGCCTCAGTACTTGCTGTCCAGAATTGGAATTTTAT...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGATGCAGTGTCTGTTTTaGTTAGGAGTACCACTGGCC | + |
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Preference number: 4 (lower is better) Translates to: VSVKANISKQICHHLKFLMQCLF*LGVPLA Trigger: GGCCAGTGGTACTCCTAACCAAAACAGACACTGCAT...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR TCA 90 bp | CAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAAACATAAAGACACTAGATGTTACTTGTaGGTCAGAAGAAGTCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: QYSPLLLTTSCKSSKHKDTRCYL*VRRSQF Trigger: GAACTGACTTCTTCTGACTCACAAGTAACATCTAGT...GTCTTTATGTTTTGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCGAGTCAGTGATAATCTaGTGTAGTTTTTGTGACATT | + |
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Preference number: 4 (lower is better) Translates to: PNWAFPIFSLIIYSHALSESVII*CSFCDI Trigger: AATGTCACAAAAACTACAGCAGATTATCACTGACTC...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAACCTTGAGGGTGATATaGTTTGCAAGGATAATTTTT | + |
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Preference number: 4 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSTLRVI*FARIIF Trigger: AAAAATTATCCTTGCAAAGCATATCACCCTCAAGGT...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | CAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAAACATAAAGACTGGAAGGCAGTATTTTaGAAGCACCATTTAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QYSPLLLTTSCKSSKHKDWKAVF*KHHLSH Trigger: ATGGCTTAAATGGTGCTTCCAAAATACTGCCTTCCA...GTCTTTATGTTTTGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGTCAGCAGCAGGGCAGTaGTTGAAAACATTTGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: VSVKANISKQICHHLKFLSAAGQ*LKTFAC Trigger: ACAAGCAAATGTTTTCAACCACTGCCCTGCTGCTGA...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGCTGCTGAAAGTTACTaGAATCTGAATCATGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VSVKANISKQICHHLKFLAAESY*NLNHVH Trigger: GTGGACATGATTCAGATTCCAGTAACTTTCAGCAGC...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | CAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAAACATAAAGACAAATCCTTTAACATGTaGGCTAGGCAGAATAATCTG | + |
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Preference number: 4 (lower is better) Translates to: QYSPLLLTTSCKSSKHKDKSFNM*ARQNNL Trigger: CAGATTATTCTGCCTAGCCCACATGTTAAAGGATTT...GTCTTTATGTTTTGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAGACAATCTACTTTCATaGCAACTGTTGCAAACTGGA | + |
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Preference number: 4 (lower is better) Translates to: SVKANISKQICHHLKFLGDNLLS*QLLQTG Trigger: TCCAGTTTGCAACAGTTGCCATGAAAGTAGATTGTC...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGCTGAATGTGAGGACTTaGATTAGACTTACAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: VSVKANISKQICHHLKFLLNVRT*IRLTVG Trigger: TCCAACTGTAAGTCTAATGCAAGTCCTCACATTCAG...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAGAGGGTGATATGCTTTaGAAGGATAATTTTTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SVKANISKQICHHLKFLGEGDML*KDNFCE Trigger: TTCACAAAAATTATCCTTGCAAAGCATATCACCCTC...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR GCA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGTGGTTGAAAACATTTaGTTGTGTCAAACTAGACAC | + |
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Preference number: 4 (lower is better) Translates to: VSVKANISKQICHHLKFLVVENI*LCQTRH Trigger: GTGTCTAGTTTGACACAAGCAAATGTTTTCAACCAC...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CCA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGACATGGAACAAAGTCTTaGCTTTCTTCAAAATCACAT | + |
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Preference number: 4 (lower is better) Translates to: SVKANISKQICHHLKFLGHGTKS*LSSKSH Trigger: ATGTGATTTTGAAGAAAGCCAAGACTTTGTTCCATG...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 90 bp | CTGAGTCTGACTGAGACCTTGGTCTTGAATACCTTGAGGGTGATATaGTTTGCAAGGATAATTTTTGTGAAGGCTGGCCACGGTTCTCAT | + |
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Preference number: 5 (lower is better) Translates to: LSLTETLVLNTLRVI*FARIIFVKAGHGSH Trigger: ATGAGAACCGTGGCCAGCCTTCACAAAAATTATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 90 bp | ATCACTTCTACTACCGGCTATGGAGACAGCCGCTTCTGTCTTGTCTaGTTTCGATTCTTTCTGAATGTGAGGACTTGCATTAGACTTACA | + |
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Preference number: 5 (lower is better) Translates to: ITSTTGYGDSRFCLV*FRFFLNVRTCIRLT Trigger: TGTAAGTCTAATGCAAGTCCTCACATTCAGAAAGAATCGAAAGCAGACAAGACAGAAGCGGCTGTCTCCATAGCCGGTAGTAGAAGTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CCA 90 bp | CTCCAAATACAAAGCTTTGTCCAACAAAACACTTTTCTACTGCTGTaGTCAGTAGGCTCTGAGTTCTACCACTGTCCAGGGTTTCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: LQIQSFVQQNTFLLL*SVGSEFYHCPGFLG Trigger: ACCTAGAAACCCTGGACAGTGGTAGAACTCAGAGCCTACTGACCACAGCAGTAGAAAAGTGTTTTGTTGGACAAAGCTTTGTATTTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032877.11 ENSMUST00000208356.2 |
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| CDS CCA 90 bp | TTCTTAGAACTAGTGACCTCGGAAACGGAGATGCAGTGTCTGTTTTaGTTAGGAGTACCACTGGCCATGATTTGTTTTGATGCTGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: FLELVTSETEMQCLF*LGVPLAMICFDAGK Trigger: CTTTCCAGCATCAAAACAAATCATGGCCAGTGGTACTCCTAACCAAAACAGACACTGCATCTCCGTTTCCGAGGTCACTAGTTCTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CCA 90 bp | CTTTCAGAGAGTGGTAGATCATCCCAAATCAAGGAGTCAGAGTTCTaGGAAGGATTCGCTGTTTCTTCGGGTTTCAGTGATGACAATGAA | + |
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Preference number: 5 (lower is better) Translates to: LSESGRSSQIKESEF*EGFAVSSGFSDDNE Trigger: TTCATTGTCATCACTGAAACCCGAAGAAACAGCGAATCCTTCCCAGAACTCTGACTCCTTGATTTGGGATGATCTACCACTCTCTGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 90 bp | ACATTTGCTTGTGTCAAACTAGACACAAAAGGACTTTCGGGTTTCTaGCGAAATGCTTTTACATTCTTTGAGCAGGCTGAGGTGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: TFACVKLDTKGLSGF*RNAFTFFEQAEVAS Trigger: TGAAGCCACCTCAGCCTGCTCAAAGAATGTAAAAGCATTTCGGCAGAAACCCGAAAGTCCTTTTGTGTCTAGTTTGACACAAGCAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS TCA 90 bp | GGAACAAAGTCTTGGCTTTCTTCAAAATCACATTCTGAGTCTGACTaGGACCTTGGTCTTGAATACCTTGAGGGTGATATGCTTTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: GTKSWLSSKSHSESD*DLGLEYLEGDMLCK Trigger: CTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAATGTGATTTTGAAGAAAGCCAAGACTTTGTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCTTGGTCTTGAATACCTaGAGGGTGATATGCTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: PNWAFPIFSLIIYSHALSLVLNT*RVICFA Trigger: TGCAAAGCATATCACCCTCAAGGTATTCAAGACCAA...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAGCAGCAGGGCAGTGGTaGAAAACATTTGCTTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: SVKANISKQICHHLKFLGAAGQW*KTFACV Trigger: GACACAAGCAAATGTTTTCAACCACTGCCCTGCTGC...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | CAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAAACATAAAGACCCAGAAGAGCCACATTaGGGACAAGTAAACCTTTTG | + |
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Preference number: 5 (lower is better) Translates to: QYSPLLLTTSCKSSKHKDPEEPH*GQVNLL Trigger: CAAAAGGTTTACTTGTCCCAAATGTGGCTCTTCTGG...GTCTTTATGTTTTGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | CCCAACTGGGCTTTTCCTATTTTCAGCCTCATCATTTATAGTCATGCTTTGAGCAATTTCATTCTTTTGTaGCAAGACCCCACTAGTCCT | + |
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Preference number: 5 (lower is better) Translates to: PNWAFPIFSLIIYSHALSNFILL*QDPTSP Trigger: AGGACTAGTGGGGTCTTGCAACAAAAGAATGAAATT...GCTCAAAGCATGACTATAAATGATGAGGCTGAAAATAGGAAAAGCCCAGTTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAAGCCTGCAACTGGAGTaGACTGTGAACATGGAACAA | + |
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Preference number: 5 (lower is better) Translates to: SVKANISKQICHHLKFLGSLQLE*TVNMEQ Trigger: TTGTTCCATGTTCACAGTCAACTCCAGTTGCAGGCT...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | TCCAACAGCATTCAGTACAGTCCACTCCTATTAACGACTTCCTGTAAGTCTTCAAGTCTTCTTTCATCATaGCTTGTGATGATCTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: SNSIQYSPLLLTTSCKSSSLLSS*LVMILS Trigger: GCTTAAGATCATCACAAGCAATGATGAAAGAAGACT...TGAAGACTTACAGGAAGTCGTTAATAGGAGTGGACTGTACTGAATGCTGTTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAATGCTTTTACATTCTTaGAGCAGGCTGAGGTGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SVKANISKQICHHLKFLGMLLHS*SRLRWL Trigger: AAGCCACCTCAGCCTGCTCAAAGAATGTAAAAGCAT...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGCATTAGACTTACAGTaGGAAAAGAGGGCCTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: VSVKANISKQICHHLKFLALDLQ*EKRASF Trigger: GAAAGAGGCCCTCTTTTCCAACTGTAAGTCTAATGC...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGACTGAGACCTTGGTCTaGAATACCTTGAGGGTGATA | + |
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Preference number: 5 (lower is better) Translates to: VSVKANISKQICHHLKFLTETLV*NTLRVI Trigger: TATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGT...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | TCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGGAACATGGAACAAAGTCTaGGCTTTCTTCAAAATCACA | + |
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Preference number: 5 (lower is better) Translates to: SVKANISKQICHHLKFLGTWNKV*AFFKIT Trigger: TGTGATTTTGAAGAAAGCCAAGACTTTGTTCCATGT...TCCCAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS-3UTR CAA 90 bp | GTATCAGTGAAAGCAAACATTTCCAAACAGATCTGCCATCACTTAAAATTTCTGGTAATGAAAAATAGTTaGCTGGATTCTGCCACTTTC | + |
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Preference number: 5 (lower is better) Translates to: VSVKANISKQICHHLKFLVMKNS*LDSATF Trigger: GAAAGTGGCAGAATCCAGCAAACTATTTTTCATTAC...CAGAAATTTTAAGTGATGGCAGATCTGTTTGGAAATGTTTGCTTTCACTGATAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 72 bp | ACTACCGGCTATGGAGACAGCCGCTTCTGTCTTGTCTaGTTTCGATTCTTTCTGAATGTGAGGACTTGCATT | + |
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Preference number: 6 (lower is better) Translates to: TTGYGDSRFCLV*FRFFLNVRTCI Trigger: AATGCAAGTCCTCACATTCAGAAAGAATCGAAAGCAGACAAGACAGAAGCGGCTGTCTCCATAGCCGGTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 72 bp | GACCTTGGTCTTGAATACCTTGAGGGTGATATGCTTTaGAAGGATAATTTTTGTGAAGGCTGGCCACGGTTC | + |
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Preference number: 6 (lower is better) Translates to: DLGLEYLEGDML*KDNFCEGWPRF Trigger: GAACCGTGGCCAGCCTTCACAAAAATTATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CCA 72 bp | CTAGTGACCTCGGAAACGGAGATGCAGTGTCTGTTTTaGTTAGGAGTACCACTGGCCATGATTTGTTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LVTSETEMQCLF*LGVPLAMICFD Trigger: ATCAAAACAAATCATGGCCAGTGGTACTCCTAACCAAAACAGACACTGCATCTCCGTTTCCGAGGTCACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CCA 72 bp | AGTGGTAGATCATCCCAAATCAAGGAGTCAGAGTTCTaGGAAGGATTCGCTGTTTCTTCGGGTTTCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SGRSSQIKESEF*EGFAVSSGFSD Trigger: ATCACTGAAACCCGAAGAAACAGCGAATCCTTCCCAGAACTCTGACTCCTTGATTTGGGATGATCTACCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | GCTCTCAGCAGCAGGGCAGTGGTTGAAAACATTTGCTaGTGTCAAACTAGACACAAAAGGACTTTCGGGTTT | + |
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Preference number: 6 (lower is better) Translates to: ALSSRAVVENIC*CQTRHKRTFGF Trigger: AAACCCGAAAGTCCTTTTGTGTCTAGTTTGACACAAGCAAATGTTTTCAACCACTGCCCTGCTGCTGAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS TCA 72 bp | ATGGAAGGCAGTATTTTGGAAGCACCATTTAAGCCATaGATTCTTTGGTGGAAGCCTGCAACTGGAGTTGAC | + |
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Preference number: 6 (lower is better) Translates to: MEGSILEAPFKP*ILWWKPATGVD Trigger: GTCAACTCCAGTTGCAGGCTTCCACCAAAGAATTCATGGCTTAAATGGTGCTTCCAAAATACTGCCTTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 72 bp | ACTGAGACCTTGGTCTTGAATACCTTGAGGGTGATATaGTTTGCAAGGATAATTTTTGTGAAGGCTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TETLVLNTLRVI*FARIIFVKAGH Trigger: GTGGCCAGCCTTCACAAAAATTATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | AGCCATGAATTCTTTGGTGGAAGCCTGCAACTGGAGTaGACTGTGAACATGGAACAAAGTCTTGGCTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: SHEFFGGSLQLE*TVNMEQSLGFL Trigger: AAGAAAGCCAAGACTTTGTTCCATGTTCACAGTCAACTCCAGTTGCAGGCTTCCACCAAAGAATTCATGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 72 bp | AATGAGAGTCAGACAATCTACTTTCATGGCAACTGTTaGAAACTGGACTCGGTAAGCCTAATTCTTCACCCA | + |
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Preference number: 6 (lower is better) Translates to: NESQTIYFHGNC*KLDSVSLILHP Trigger: TGGGTGAAGAATTAGGCTTACCGAGTCCAGTTTGCAACAGTTGCCATGAAAGTAGATTGTCTGACTCTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS GCA 72 bp | TGTGTCAAACTAGACACAAAAGGACTTTCGGGTTTCTaGCGAAATGCTTTTACATTCTTTGAGCAGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: CVKLDTKGLSGF*RNAFTFFEQAE Trigger: CTCAGCCTGCTCAAAGAATGTAAAAGCATTTCGGCAGAAACCCGAAAGTCCTTTTGTGTCTAGTTTGACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | TCTGAAAACCAGGATGTATTCCCAGAGCCCTGTATGTaGTTAAGATCACTGTCTGAGTCATCTGAAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: SENQDVFPEPCM*LRSLSESSEVS Trigger: ACTCACTTCAGATGACTCAGACAGTGATCTTAACAACATACAGGGCTCTGGGAATACATCCTGGTTTTCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 90 bp | CACCATTTAAGCCATGAATTCTTTGGTGGAAGCCTGCAACTGGAGTaGACTGTGAACATGGAACAAAGTCTTGGCTTTCTTCAAAATCAC | + |
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Preference number: 6 (lower is better) Translates to: HHLSHEFFGGSLQLE*TVNMEQSLGFLQNH Trigger: GTGATTTTGAAGAAAGCCAAGACTTTGTTCCATGTTCACAGTCAACTCCAGTTGCAGGCTTCCACCAAAGAATTCATGGCTTAAATGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS TCA 72 bp | TCTTGGCTTTCTTCAAAATCACATTCTGAGTCTGACTaGGACCTTGGTCTTGAATACCTTGAGGGTGATATG | + |
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Preference number: 6 (lower is better) Translates to: SWLSSKSHSESD*DLGLEYLEGDM Trigger: CATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAATGTGATTTTGAAGAAAGCCAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | GACTCGGTAAGCCTAATTCTTCACCCAACTTTCCTGTaGTATTATTCTTGTCCATACAAGAATGAAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: DSVSLILHPTFL*YYSCPYKNEGS Trigger: GGAGCCTTCATTCTTGTATGGACAAGAATAATACAACAGGAAAGTTGGGTGAAGAATTAGGCTTACCGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | GTTACAGCAACCTCACTTTCAACAACTGCTAGAAACTaGTTCAGACTTTCAGAGAGTGGTAGATCATCCCAA | + |
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Preference number: 6 (lower is better) Translates to: VTATSLSTTARN*FRLSESGRSSQ Trigger: TTGGGATGATCTACCACTCTCTGAAAGTCTGAACAAGTTTCTAGCAGTTGTTGAAAGTGAGGTTGCTGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | CAAAATCACATTCTGAGTCTGACTGAGACCTTGGTCTaGAATACCTTGAGGGTGATATGCTTTGCAAGGATA | + |
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Preference number: 6 (lower is better) Translates to: QNHILSLTETLV*NTLRVICFARI Trigger: TATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAATGTGATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | ACATCATTTTCAAGGCTCTCAGCAGCAGGGCAGTGGTaGAAAACATTTGCTTGTGTCAAACTAGACACAAAA | + |
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Preference number: 6 (lower is better) Translates to: TSFSRLSAAGQW*KTFACVKLDTK Trigger: TTTTGTGTCTAGTTTGACACAAGCAAATGTTTTCAACCACTGCCCTGCTGCTGAGAGCCTTGAAAATGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 90 bp | TCTATCTCAGTTACAGCAACCTCACTTTCAACAACTGCTAGAAACTaGTTCAGACTTTCAGAGAGTGGTAGATCATCCCAAATCAAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SISVTATSLSTTARN*FRLSESGRSSQIKE Trigger: CTCCTTGATTTGGGATGATCTACCACTCTCTGAAAGTCTGAACAAGTTTCTAGCAGTTGTTGAAAGTGAGGTTGCTGTAACTGAGATAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 90 bp | GGCTTTCTTCAAAATCACATTCTGAGTCTGACTGAGACCTTGGTCTaGAATACCTTGAGGGTGATATGCTTTGCAAGGATAATTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GFLQNHILSLTETLV*NTLRVICFARIIFV Trigger: CACAAAAATTATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAATGTGATTTTGAAGAAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 90 bp | AGTCTTGGCTTTCTTCAAAATCACATTCTGAGTCTGACTGAGACCTaGGTCTTGAATACCTTGAGGGTGATATGCTTTGCAAGGATAATT | + |
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Preference number: 6 (lower is better) Translates to: SLGFLQNHILSLTET*VLNTLRVICFARII Trigger: AATTATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAATGTGATTTTGAAGAAAGCCAAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CCA 72 bp | ATGCAAATAGGCAATGACTGTAAATCCTTTAACATGTaGGCTAGGCAGAATAATCTGGGAAGCTACAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: MQIGNDCKSFNM*ARQNNLGSYKC Trigger: ACACTTGTAGCTTCCCAGATTATTCTGCCTAGCCCACATGTTAAAGGATTTACAGTCATTGCCTATTTGCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032877.11 ENSMUST00000208356.2 |
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| CDS CAA 72 bp | ATTCTGAGTCTGACTGAGACCTTGGTCTTGAATACCTaGAGGGTGATATGCTTTGCAAGGATAATTTTTGTG | + |
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Preference number: 6 (lower is better) Translates to: ILSLTETLVLNT*RVICFARIIFV Trigger: CACAAAAATTATCCTTGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | TTTCTTCAAAATCACATTCTGAGTCTGACTGAGACCTaGGTCTTGAATACCTTGAGGGTGATATGCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: FLQNHILSLTET*VLNTLRVICFA Trigger: TGCAAAGCATATCACCCTCAAGGTATTCAAGACCAAGGTCTCAGTCAGACTCAGAATGTGATTTTGAAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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| CDS CAA 72 bp | GGTACTTCCAGTGGTAACAAGTTATCCTGTGGTATTTaGGTAATTTCTGTTCCAATGTCCTTATCGTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GTSSGNKLSCGI*VISVPMSLSLA Trigger: TGCTAACGATAAGGACATTGGAACAGAAATTACCAAAATACCACAGGATAACTTGTTACCACTGGAAGTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032877.11 |
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