Pregenerated sensors for DCAKD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020935Ensembl transcript IDs: ENSMUST00000021313.9, ENSMUST00000155490.3
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCACGCCCAGGAGGAGAACCACACTGCACACAGGAGAGCTCTATTTaGAGGAGGCCTTCAGTCTGGAAGGATTTGCTGTGGTCCACTAGA | + |
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Preference number: 1 (lower is better) Translates to: ARPGGEPHCTQESSI*RRPSVWKDLLWSTR Trigger: TCTAGTGGACCACAGCAAATCCTTCCAGACTGAAGGCCTCCTTCAAATAGAGCTCTCCTGTGTGCAGTGTGGTTCTCCTCCTGGGCGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR TCA 90 bp | CAGTCTGGAAGGATTTGCTGTGGTCCACTAGACAGCTTGTGGCCATaGTGCGGCAGATGCTCTGGAAAGGTTCAAGCCCAAGACACTTTT | + |
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Preference number: 1 (lower is better) Translates to: QSGRICCGPLDSLWP*CGRCSGKVQAQDTF Trigger: AAAAGTGTCTTGGGCTTGAACCTTTCCAGAGCATCTGCCGCATCATGGCCACAAGCTGTCTAGTGGACCACAGCAAATCCTTCCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | GCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGGGAGAGCTTGGGGCCTaGGGAATGCCGAGAGCACGG | + |
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Preference number: 2 (lower is better) Translates to: AIPFIEHLWGRLWYTRVEGELGA*GMPRAR Trigger: CCGTGCTCTCGGCATTCCCCAGGCCCCAAGCTCTCC...CTCCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | CCATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTTCAGTCTGGGGCTGCTaGAGCCTGACCTGGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: PSRGVQSGRTQPGYALFSSVWGC*SLTWGS Trigger: GCTGCCCCAGGTCAGGCTCCAGCAGCCCCAGACTGA...AGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGGGCAGGGAGCATGTaGGGAAGGCACAGAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: EQFHLLSTCGAGCGTLEWRAGSM*GRHRGR Trigger: CCTACCTCTGTGCCTTCCCCACATGCTCCCTGCCCT...CCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR TCA 90 bp | GCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGGTGGGCTTCTTTTGCTaGGTCCCAGACTGGTTACAC | + |
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Preference number: 2 (lower is better) Translates to: AIPFIEHLWGRLWYTRVEVGFFC*VPDWLH Trigger: GTGTAACCAGTCTGGGACTCAGCAAAAGAAGCCCAC...CTCCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTGTGGCCATGATGCGGCAGATGCTCTGGAAAGGTTCAAGCCCAAGACACTTGGTTTCCTGCCACCATaGATGTTGTTCTGCAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ACGHDAADALERFKPKTLGFLPP*MLFCSG Trigger: ACCACTGCAGAACAACATCCATGGTGGCAGGAAACC...AAGTGTCTTGGGCTTGAACCTTTCCAGAGCATCTGCCGCATCATGGCCACAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR GCA 90 bp | GCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGCAGTCTGGAAGGATTTaGTGTGGTCCACTAGACAGC | + |
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Preference number: 2 (lower is better) Translates to: AIPFIEHLWGRLWYTRVEQSGRI*CGPLDS Trigger: GCTGTCTAGTGGACCACAGCAAATCCTTCCAGACTG...CTCCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR GCA 90 bp | GAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGGGAGGAGAACCACACTaGACACAGGAGAGCTCTATT | + |
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Preference number: 2 (lower is better) Translates to: EQFHLLSTCGAGCGTLEWGGEPH*TQESSI Trigger: AATAGAGCTCTCCTGTGTGCAGTGTGGTTCTCCTCC...CCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | GAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGCCCAAGACACTTTTaGCTACACAGTCGTAACCAT | + |
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Preference number: 2 (lower is better) Translates to: EQFHLLSTCGAGCGTLEWSPRHF*LHSRNH Trigger: ATGGTTACGACTGTGTAGCCAAAAGTGTCTTGGGCT...CCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | GCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGATTCTCTCGTGGATTTaGATGAGACAGGAAGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: AIPFIEHLWGRLWYTRVEILSWI*MRQEGD Trigger: ATCACCTTCCTGTCTCATCCAAATCCACGAGAGAAT...CTCCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CCA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGATGGAAGGATTTGCTGTaGTCCACTAGACAGCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRWKDLL*STRQLV Trigger: CACAAGCTGTCTAGTGGACCACAGCAAATCCTTCCA...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR CCA 72 bp | GTAACCATAGGGAGAGCCGCAGAGCCTGCTAACCGCTaGTTTCCTGCCACCATGGATGTTGTTCTGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: VTIGRAAEPANR*FPATMDVVLQW Trigger: CCACTGCAGAACAACATCCATGGTGGCAGGAAACCAGCGGTTAGCAGGCTCTGCGGCTCTCCCTATGGTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR TCA 72 bp | GGAGGAGAACCACACTGCACACAGGAGAGCTCTATTTaGAGGAGGCCTTCAGTCTGGAAGGATTTGCTGTGG | + |
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Preference number: 3 (lower is better) Translates to: GGEPHCTQESSI*RRPSVWKDLLW Trigger: CCACAGCAAATCCTTCCAGACTGAAGGCCTCCTTCAAATAGAGCTCTCCTGTGTGCAGTGTGGTTCTCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR CCA 72 bp | GCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTaGTACACTAGAGTGGAGATGAATCGGCCCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: AIPFIEHLWGRL*YTRVEMNRPCH Trigger: ATGGCAGGGCCGATTCATCTCCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CAA 90 bp | GCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGACAGGAGAGCTCTATTaGAAGGAGGCCTTCAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: AIPFIEHLWGRLWYTRVETGELY*KEAFSL Trigger: CAGACTGAAGGCCTCCTTCAAATAGAGCTCTCCTGT...CTCCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR CCA 72 bp | AGTCTCAGAGTCAAGAGAGTTGTAGTGTTGTGGACATaGTACCTAACTCAGGCCTCCAAGGAGAAGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SLRVKRVVVLWT*YLTQASKEKEA Trigger: GGCTTCCTTCTCCTTGGAGGCCTGAGTTAGGTACCATGTCCACAACACTACAACTCTCTTGACTCTGAGACT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR-3UTR CAA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGGTAGTGGGCTTCTTTaGCTGAGTCCCAGACTGGTT | + |
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Preference number: 3 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRGSGLL*LSPRLV Trigger: AACCAGTCTGGGACTCAGCAAAAGAAGCCCACTACC...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | TGTTGTTCTGCAGTGGTAGTTAGGAATGGTAGGGCTCGGGTGGGGTGGGGTGTCGACGGAGCTCTTGCCTaGGGCGATGCCTCCCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: CCSAVVVRNGRARVGWGVDGALA*GDASRQ Trigger: CTGACGGGAGGCATCGCCTCAGGCAAGAGCTCCGTC...GACACCCCACCCCACCCGAGCCCTACCATTCCTAACTACCACTGCAGAACAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | GACATGGTACCTAACTCAGGCCTCCAAGGAGAAGGAAGCCTAAGGCTTGCTGCCGCAGGTAGAGGAGACTaGCGATGCCTGCGAGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: DMVPNSGLQGEGSLRLAAAGRGD*RCLRGP Trigger: CGGGCCTCGCAGGCATCGCCAGTCTCCTCTACCTGC...GGCAGCAAGCCTTAGGCTTCCTTCTCCTTGGAGGCCTGAGTTAGGTACCATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | TGTTGTTCTGCAGTGGTAGTTAGGAATGGTAGGGCTCGGGTGGGGTGGGGTGTCTGCCGACGGTCAGGCTaGTTGAAGATCAGGTCTCCG | + |
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Preference number: 4 (lower is better) Translates to: CCSAVVVRNGRARVGWGVCRRSG*LKIRSP Trigger: CGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCA...GACACCCCACCCCACCCGAGCCCTACCATTCCTAACTACCACTGCAGAACAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR GCA 90 bp | CATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTCTCTTGCCTGAGGCGATaGCTCCCGTCAGCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: HLEAYSLGEPNQVTRYSLSCLRR*LPSAPP Trigger: TGGTGGGGCTGACGGGAGGCATCGCCTCAGGCAAGA...GAGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | GAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGTGCAGGAGGATGGCCTaGCGTCTGGTGAGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: EQFHLLSTCGAGCGTLEWCRRMA*RLVRLH Trigger: GTGGAGCCTCACCAGACGCCAGGCCATCCTCCTGCA...CCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGATGGCCTGGCGTCTGGTaGGGCTCCACTCGCCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRWPGVW*GSTRPS Trigger: ACTCGGGCGAGTGGAGCCTCACCAGACGCCAGGCCA...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | CATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTCGGAGGAGGTAACGGGTaGGCAGGTAGAGGAGACTGG | + |
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Preference number: 4 (lower is better) Translates to: HLEAYSLGEPNQVTRYSLGGGNG*AGRGDW Trigger: CCAGTCTCCTCTACCTGCTCACCCGTTACCTCCTCC...GAGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | CATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTCTGGAGCGTTCCAGCTTaGCGTGCAGGAGGATGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HLEAYSLGEPNQVTRYSLWSVPA*RAGGWP Trigger: AGGCCATCCTCCTGCACGCCAAGCTGGAACGCTCCA...GAGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | CCATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTGACGGTCAGGCTGGTTaGAGATCAGGTCTCCGAGGA | + |
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Preference number: 4 (lower is better) Translates to: PSRGVQSGRTQPGYALFSDGQAG*RSGLRG Trigger: TCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTC...AGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | CATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTCGAGTTGTCCAGAACGTaGTTGGCCATGCGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: HLEAYSLGEPNQVTRYSLELSRT*LAMRAL Trigger: CAAGGCCCGCATGGCCAATCACGTTCTGGACAACTC...GAGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR GCA 90 bp | GAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGATGGAGTTGAGCAGCTaGCGACGGTCAGGCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EQFHLLSTCGAGCGTLEWMELSS*RRSGWL Trigger: CAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCAT...CCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | CCATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTGTTGGAATACCTGGATaGCGGAGCTCTTGCCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PSRGVQSGRTQPGYALFSVGIPG*RSSCLR Trigger: CCTCAGGCAAGAGCTCCGTCATCCAGGTATTCCAAC...AGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | ACACTGCACACAGGAGAGCTCTATTTGAAGGAGGCCTTCAGTCTGGAAGGATTTTCCTTCAGGGGCAGCTaGGCGTTGATCCTCGCCTCT | + |
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Preference number: 4 (lower is better) Translates to: TLHTGELYLKEAFSLEGFSFRGS*ALILAS Trigger: AGAGGCGAGGATCAACGCCCAGCTGCCCCTGAAGGA...AAATCCTTCCAGACTGAAGGCCTCCTTCAAATAGAGCTCTCCTGTGTGCAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR GCA 90 bp | GCTTGTGGCCATGATGCGGCAGATGCTCTGGAAAGGTTCAAGCCCAAGACACTTCCAGCAAGACTTCAGTaGCAAAGGCCTCTACTATAC | + |
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Preference number: 4 (lower is better) Translates to: ACGHDAADALERFKPKTLPARLQ*QRPLLY Trigger: GTATAGTAGAGGCCTTTGGCACTGAAGTCTTGCTGG...AAGTGTCTTGGGCTTGAACCTTTCCAGAGCATCTGCCGCATCATGGCCACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | CCATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTAGCTGTTGGAATACCTaGATGACGGAGCTCTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: PSRGVQSGRTQPGYALFSSCWNT*MTELLP Trigger: AGGCAAGAGCTCCGTCATCCAGGTATTCCAACAGCT...AGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CCA 90 bp | ACACTGCACACAGGAGAGCTCTATTTGAAGGAGGCCTTCAGTCTGGAAGGATTTGCACAGCCCAGCTGTTaGAATACCTGGATGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: TLHTGELYLKEAFSLEGFAQPSC*NTWMTE Trigger: CTCCGTCATCCAGGTATTCCAACAGCTGGGCTGTGC...AAATCCTTCCAGACTGAAGGCCTCCTTCAAATAGAGCTCTCCTGTGTGCAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| 3UTR CAA 72 bp | AGGAGGAGAACCACACTGCACACAGGAGAGCTCTATTaGAAGGAGGCCTTCAGTCTGGAAGGATTTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RRRTTLHTGELY*KEAFSLEGFAV Trigger: CACAGCAAATCCTTCCAGACTGAAGGCCTCCTTCAAATAGAGCTCTCCTGTGTGCAGTGTGGTTCTCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGACTCGGAGAAAGTACTTaGAGGTCTCCTTCATCATTT | + |
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Preference number: 4 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRLGEST*RSPSSF Trigger: AAATGATGAAGGAGACCTTCAAGTACTTTCTCCGAG...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR TCA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGATGTGCTTCATATACTTaGGCAGCTTCTTGGTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRCASYT*AASWSQ Trigger: TTGAGACCAAGAAGCTGCTCAAGTATATGAAGCACA...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR GCA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGATACACTACCACTGTGTaGTTCATATACTTGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRYTTTV*FIYLSS Trigger: GCTGCTCAAGTATATGAAGCACACAGTGGTAGTGTA...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS GCA 90 bp | CCAAGCCGCAGCGGCAGATACTCCATGGAGCGTTCCAGCTTGGCGTaGAGGAGGATGGCCTGGCGTCTGGTGAGGCTCCACTCGCCCGAG | + |
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Preference number: 5 (lower is better) Translates to: PSRSGRYSMERSSLA*RRMAWRLVRLHSPE Trigger: CTCGGGCGAGTGGAGCCTCACCAGACGCCAGGCCATCCTCCTGCACGCCAAGCTGGAACGCTCCATGGAGTATCTGCCGCTGCGGCTTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 90 bp | GCCTGGCGTCTGGTGAGGCTCCACTCGCCCGAGTTGTCCAGAACGTaGTTGGCCATGCGGGCCTTGTCCTTCAGGGGCAGCTGGGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: AWRLVRLHSPELSRT*LAMRALSFRGSWAL Trigger: CAACGCCCAGCTGCCCCTGAAGGACAAGGCCCGCATGGCCAATCACGTTCTGGACAACTCGGGCGAGTGGAGCCTCACCAGACGCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS GCA 90 bp | GCGGGCCTTGTCCTTCAGGGGCAGCTGGGCGTTGATCCTCGCCTCTaGATCCTCCCGGTTCAGGTTGTTCCGCTTCATCAGCCGCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: AGLVLQGQLGVDPRL*ILPVQVVPLHQPRQ Trigger: CTGGCGCGGCTGATGAAGCGGAACAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGCCCAGCTGCCCCTGAAGGACAAGGCCCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 90 bp | TGGAGCGTTCCAGCTTGGCGTGCAGGAGGATGGCCTGGCGTCTGGTaGGGCTCCACTCGCCCGAGTTGTCCAGAACGTGATTGGCCATGC | + |
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Preference number: 5 (lower is better) Translates to: WSVPAWRAGGWPGVW*GSTRPSCPERDWPC Trigger: GCATGGCCAATCACGTTCTGGACAACTCGGGCGAGTGGAGCCTCACCAGACGCCAGGCCATCCTCCTGCACGCCAAGCTGGAACGCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS GCA 90 bp | AGGGAGGAGGTAACGGGTGAGCAGGTAGAGGAGACTGGCGATGCCTaGGAGGCCCGTCAGGAACCCAAGCCGCAGCGGCAGATACTCCAT | + |
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Preference number: 5 (lower is better) Translates to: REEVTGEQVEETGDA*EARQEPKPQRQILH Trigger: ATGGAGTATCTGCCGCTGCGGCTTGGGTTCCTGACGGGCCTCGCAGGCATCGCCAGTCTCCTCTACCTGCTCACCCGTTACCTCCTCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 90 bp | CGTGATTGGCCATGCGGGCCTTGTCCTTCAGGGGCAGCTGGGCGTTaGTCCTCGCCTCTGCATCCTCCCGGTTCAGGTTGTTCCGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RDWPCGPCPSGAAGR*SSPLHPPGSGCSAS Trigger: TGAAGCGGAACAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGCCCAGCTGCCCCTGAAGGACAAGGCCCGCATGGCCAATCACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CCA 90 bp | TGCCGCGCAATGACGTCCACGTCGATTACAGCACAGCCCAGCTGTTaGAATACCTGGATGACGGAGCTCTTGCCTGAGGCGATGCCTCCC | + |
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Preference number: 5 (lower is better) Translates to: CRAMTSTSITAQPSC*NTWMTELLPEAMPP Trigger: GGGAGGCATCGCCTCAGGCAAGAGCTCCGTCATCCAGGTATTCCAACAGCTGGGCTGTGCTGTAATCGACGTGGACGTCATTGCGCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS GCA 90 bp | CGAGGACCTTGCGGTCGATGTCGCCATTCTCCAGCAAGACTTCAGTaGCAAAGGCCTCTACTATACGCCGGTGGGCAGGATACCCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RGPCGRCRHSPARLQ*QRPLLYAGGQDTLA Trigger: AGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGCCTTTGGCACTGAAGTCTTGCTGGAGAATGGCGACATCGACCGCAAGGTCCTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 90 bp | TTCAGTGCCAAAGGCCTCTACTATACGCCGGTGGGCAGGATACCCTaGCTGGACAACGTGCCGCGCAATGACGTCCACGTCGATTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSAKGLYYTPVGRIP*LDNVPRNDVHVDYS Trigger: GCTGTAATCGACGTGGACGTCATTGCGCGGCACGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGCCTTTGGCACTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 90 bp | TTCTCCAGCAAGACTTCAGTGCCAAAGGCCTCTACTATACGCCGGTaGGCAGGATACCCTGGCTGGACAACGTGCCGCGCAATGACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSSKTSVPKASTIRR*AGYPGWTTCRAMTS Trigger: GGACGTCATTGCGCGGCACGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGCCTTTGGCACTGAAGTCTTGCTGGAGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 90 bp | ATCTCAGGGTGGGTAATGGAGTTGAGCAGCTGCCGACGGTCAGGCTaGTTGAAGATCAGGTCTCCGAGGACCTTGCGGTCGATGTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISGWVMELSSCRRSG*LKIRSPRTLRSMSP Trigger: TGGCGACATCGACCGCAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS-3UTR CAA 90 bp | GACATGGTACCTAACTCAGGCCTCCAAGGAGAAGGAAGCCTAAGGCTTGCTGCCCGACGGTCAGGCTGGTaGAAGATCAGGTCTCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DMVPNSGLQGEGSLRLAARRSGW*KIRSPR Trigger: CCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCG...GGCAGCAAGCCTTAGGCTTCCTTCTCCTTGGAGGCCTGAGTTAGGTACCATGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CAA 90 bp | GAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGAGTGGAGGGGCAGCTGGGCGTaGATCCTCGCCTCTGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: EQFHLLSTCGAGCGTLEWRGSWA*ILASAS Trigger: GGATGCAGAGGCGAGGATCAACGCCCAGCTGCCCCT...CCACTCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS GCA 90 bp | ATCATTTCCTTGCGGATCTCAGGGTGGGTAATGGAGTTGAGCAGCTaGCGACGGTCAGGCTGGTTGAAGATCAGGTCTCCGAGGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IISLRISGWVMELSS*RRSGWLKIRSPRTL Trigger: CAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGAGATCCGCAAGGAAATGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS-3UTR CAA 90 bp | CATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTCGGGTGGGTAATGGAGTaGAGCAGCTGCCGACGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HLEAYSLGEPNQVTRYSLGWVME*SSCRRS Trigger: TGACCGTCGGCAGCTGCTCAACTCCATTACCCACCC...GAGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CAA 90 bp | TTTAGAGCAATTCCATTTATTGAGCACCTGTGGGGCAGGCTGTGGTACACTAGATTGGCCATGCGGGCCTaGTCCTTCAGGGGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FRAIPFIEHLWGRLWYTRLAMRA*SFRGSW Trigger: CCAGCTGCCCCTGAAGGACAAGGCCCGCATGGCCAA...TCTAGTGTACCACAGCCTGCCCCACAGGTGCTCAATAAATGGAATTGCTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS GCA 90 bp | AGCCGCGCCAGCTGTGTATCACGGTCACAGTACACTACCACTGTGTaGTTCATATACTTGAGCAGCTTCTTGGTCTCAAACAGGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRASCVSRSQYTTTV*FIYLSSFLVSNRRG Trigger: CCCCCTCCTGTTTGAGACCAAGAAGCTGCTCAAGTATATGAAGCACACAGTGGTAGTGTACTGTGACCGTGATACACAGCTGGCGCGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CAA 90 bp | CATCTAGAGGCGTACAGTCTGGGAGAACCCAACCAGGTTACGCGTTATTCTCTCAGCACAGCCCAGCTGTaGGAATACCTGGATGACGGA | + |
|
Preference number: 5 (lower is better) Translates to: HLEAYSLGEPNQVTRYSLSTAQL*EYLDDG Trigger: TCCGTCATCCAGGTATTCCAACAGCTGGGCTGTGCT...GAGAGAATAACGCGTAACCTGGTTGGGTTCTCCCAGACTGTACGCCTCTAGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CAA 90 bp | CAGCTTGTGGCCATGATGCGGCAGATGCTCTGGAAAGGTTCAAGCCCAAGACACTCCTTCATCATTTCCTaGCGGATCTCAGGGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLVAMMRQMLWKGSSPRHSFIIS*RISGWV Trigger: TACCCACCCTGAGATCCGCAAGGAAATGATGAAGGA...GTGTCTTGGGCTTGAACCTTTCCAGAGCATCTGCCGCATCATGGCCACAAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS-3UTR CAA 90 bp | GCTTGTGGCCATGATGCGGCAGATGCTCTGGAAAGGTTCAAGCCCAAGACACTTTACTTGAGCAGCTTCTaGGTCTCAAACAGGAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ACGHDAADALERFKPKTLYLSSF*VSNRRG Trigger: CCCCCTCCTGTTTGAGACCAAGAAGCTGCTCAAGTA...AAGTGTCTTGGGCTTGAACCTTTCCAGAGCATCTGCCGCATCATGGCCACAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CCA 90 bp | AAGTACTTGAAGGTCTCCTTCATCATTTCCTTGCGGATCTCAGGGTaGGTAATGGAGTTGAGCAGCTGCCGACGGTCAGGCTGGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KYLKVSFIISLRISG*VMELSSCRRSGWLK Trigger: CTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGAGATCCGCAAGGAAATGATGAAGGAGACCTTCAAGTACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS-3UTR CAA 90 bp | CAGCTTGTGGCCATGATGCGGCAGATGCTCTGGAAAGGTTCAAGCCCAAGACACGTGTGCTTCATATACTaGAGCAGCTTCTTGGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLVAMMRQMLWKGSSPRHVCFIY*SSFLVS Trigger: TGAGACCAAGAAGCTGCTCAAGTATATGAAGCACAC...GTGTCTTGGGCTTGAACCTTTCCAGAGCATCTGCCGCATCATGGCCACAAGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 90 bp | GTGTATCACGGTCACAGTACACTACCACTGTGTGCTTCATATACTTaGGCAGCTTCTTGGTCTCAAACAGGAGGGGGATGTCCAGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: VYHGHSTLPLCASYT*AASWSQTGGGCPES Trigger: TGATTCTGGACATCCCCCTCCTGTTTGAGACCAAGAAGCTGCTCAAGTATATGAAGCACACAGTGGTAGTGTACTGTGACCGTGATACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS GCA 72 bp | GTAACGGGTGAGCAGGTAGAGGAGACTGGCGATGCCTaGGAGGCCCGTCAGGAACCCAAGCCGCAGCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: VTGEQVEETGDA*EARQEPKPQRQ Trigger: CTGCCGCTGCGGCTTGGGTTCCTGACGGGCCTCGCAGGCATCGCCAGTCTCCTCTACCTGCTCACCCGTTAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CCA 72 bp | ATGGAGCGTTCCAGCTTGGCGTGCAGGAGGATGGCCTaGCGTCTGGTGAGGCTCCACTCGCCCGAGTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MERSSLACRRMA*RLVRLHSPELS Trigger: GGACAACTCGGGCGAGTGGAGCCTCACCAGACGCCAGGCCATCCTCCTGCACGCCAAGCTGGAACGCTCCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CAA 72 bp | GCCATGCGGGCCTTGTCCTTCAGGGGCAGCTGGGCGTaGATCCTCGCCTCTGCATCCTCCCGGTTCAGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: AMRALSFRGSWA*ILASASSRFRL Trigger: CAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGCCCAGCTGCCCCTGAAGGACAAGGCCCGCATGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CAA 72 bp | AGCCGCAGCGGCAGATACTCCATGGAGCGTTCCAGCTaGGCGTGCAGGAGGATGGCCTGGCGTCTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSGRYSMERSS*ACRRMAWRLVR Trigger: CCTCACCAGACGCCAGGCCATCCTCCTGCACGCCAAGCTGGAACGCTCCATGGAGTATCTGCCGCTGCGGCT 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CAA 90 bp | AGGAACCCAAGCCGCAGCGGCAGATACTCCATGGAGCGTTCCAGCTaGGCGTGCAGGAGGATGGCCTGGCGTCTGGTGAGGCTCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: RNPSRSGRYSMERSS*ACRRMAWRLVRLHS Trigger: CGAGTGGAGCCTCACCAGACGCCAGGCCATCCTCCTGCACGCCAAGCTGGAACGCTCCATGGAGTATCTGCCGCTGCGGCTTGGGTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 72 bp | CCATGCGGGCCTTGTCCTTCAGGGGCAGCTGGGCGTTaGTCCTCGCCTCTGCATCCTCCCGGTTCAGGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: PCGPCPSGAAGR*SSPLHPPGSGC Trigger: ACAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGCCCAGCTGCCCCTGAAGGACAAGGCCCGCATGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 72 bp | CTGGTGAGGCTCCACTCGCCCGAGTTGTCCAGAACGTaGTTGGCCATGCGGGCCTTGTCCTTCAGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LVRLHSPELSRT*LAMRALSFRGS Trigger: GCTGCCCCTGAAGGACAAGGCCCGCATGGCCAATCACGTTCTGGACAACTCGGGCGAGTGGAGCCTCACCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 72 bp | CCAGCTTGGCGTGCAGGAGGATGGCCTGGCGTCTGGTaGGGCTCCACTCGCCCGAGTTGTCCAGAACGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PAWRAGGWPGVW*GSTRPSCPERD Trigger: ATCACGTTCTGGACAACTCGGGCGAGTGGAGCCTCACCAGACGCCAGGCCATCCTCCTGCACGCCAAGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CAA 72 bp | CAGCCCAGCTGTTGGAATACCTGGATGACGGAGCTCTaGCCTGAGGCGATGCCTCCCGTCAGCCCCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QPSCWNTWMTEL*PEAMPPVSPTR Trigger: CCTGGTGGGGCTGACGGGAGGCATCGCCTCAGGCAAGAGCTCCGTCATCCAGGTATTCCAACAGCTGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CAA 90 bp | GGCAGCTGGGCGTTGATCCTCGCCTCTGCATCCTCCCGGTTCAGGTaGTTCCGCTTCATCAGCCGCGCCAGCTGTGTATCACGGTCACAG | + |
|
Preference number: 6 (lower is better) Translates to: GSWALILASASSRFR*FRFISRASCVSRSQ Trigger: CTGTGACCGTGATACACAGCTGGCGCGGCTGATGAAGCGGAACAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGCCCAGCTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS TCA 72 bp | GGGCAGGATACCCTGGCTGGACAACGTGCCGCGCAATaGCGTCCACGTCGATTACAGCACAGCCCAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GQDTLAGQRAAQ*RPRRLQHSPAV Trigger: AACAGCTGGGCTGTGCTGTAATCGACGTGGACGTCATTGCGCGGCACGTTGTCCAGCCAGGGTATCCTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS GCA 72 bp | ATACGCCGGTGGGCAGGATACCCTGGCTGGACAACGTaGCGCGCAATGACGTCCACGTCGATTACAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: IRRWAGYPGWTT*RAMTSTSITAQ Trigger: CTGTGCTGTAATCGACGTGGACGTCATTGCGCGGCACGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS GCA 72 bp | GTCCTTCAGGGGCAGCTGGGCGTTGATCCTCGCCTCTaGATCCTCCCGGTTCAGGTTGTTCCGCTTCATCAG | + |
|
Preference number: 6 (lower is better) Translates to: VLQGQLGVDPRL*ILPVQVVPLHQ Trigger: CTGATGAAGCGGAACAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGCCCAGCTGCCCCTGAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CCA 72 bp | GCCTCTACTATACGCCGGTGGGCAGGATACCCTGGCTaGACAACGTGCCGCGCAATGACGTCCACGTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: ASTIRRWAGYPG*TTCRAMTSTSI Trigger: AATCGACGTGGACGTCATTGCGCGGCACGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 72 bp | AAAGGCCTCTACTATACGCCGGTGGGCAGGATACCCTaGCTGGACAACGTGCCGCGCAATGACGTCCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: KGLYYTPVGRIP*LDNVPRNDVHV Trigger: GACGTGGACGTCATTGCGCGGCACGTTGTCCAGCCAGGGTATCCTGCCCACCGGCGTATAGTAGAGGCCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS TCA 72 bp | CAGCTGTTGGAATACCTGGATGACGGAGCTCTTGCCTaGGGCGATGCCTCCCGTCAGCCCCACCAGGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QLLEYLDDGALA*GDASRQPHQEH Trigger: ATGTTCCTGGTGGGGCTGACGGGAGGCATCGCCTCAGGCAAGAGCTCCGTCATCCAGGTATTCCAACAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 72 bp | TGGGTAATGGAGTTGAGCAGCTGCCGACGGTCAGGCTaGTTGAAGATCAGGTCTCCGAGGACCTTGCGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: WVMELSSCRRSG*LKIRSPRTLRS Trigger: CGACCGCAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CAA 72 bp | GCGTTGATCCTCGCCTCTGCATCCTCCCGGTTCAGGTaGTTCCGCTTCATCAGCCGCGCCAGCTGTGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: ALILASASSRFR*FRFISRASCVS Trigger: TGATACACAGCTGGCGCGGCTGATGAAGCGGAACAACCTGAACCGGGAGGATGCAGAGGCGAGGATCAACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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| CDS CAA 90 bp | TCAGGGTGGGTAATGGAGTTGAGCAGCTGCCGACGGTCAGGCTGGTaGAAGATCAGGTCTCCGAGGACCTTGCGGTCGATGTCGCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: SGWVMELSSCRRSGW*KIRSPRTLRSMSPF Trigger: GAATGGCGACATCGACCGCAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CAA 90 bp | AGCTGCCGACGGTCAGGCTGGTTGAAGATCAGGTCTCCGAGGACCTaGCGGTCGATGTCGCCATTCTCCAGCAAGACTTCAGTGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SCRRSGWLKIRSPRT*RSMSPFSSKTSVPK Trigger: CTTTGGCACTGAAGTCTTGCTGGAGAATGGCGACATCGACCGCAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS GCA 72 bp | TTGCGGATCTCAGGGTGGGTAATGGAGTTGAGCAGCTaGCGACGGTCAGGCTGGTTGAAGATCAGGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LRISGWVMELSS*RRSGWLKIRSP Trigger: CGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGAGATCCGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 72 bp | ACGTCGATTACAGCACAGCCCAGCTGTTGGAATACCTaGATGACGGAGCTCTTGCCTGAGGCGATGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: TSITAQPSCWNT*MTELLPEAMPP Trigger: GGGAGGCATCGCCTCAGGCAAGAGCTCCGTCATCCAGGTATTCCAACAGCTGGGCTGTGCTGTAATCGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CAA 72 bp | GTAATGGAGTTGAGCAGCTGCCGACGGTCAGGCTGGTaGAAGATCAGGTCTCCGAGGACCTTGCGGTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: VMELSSCRRSGW*KIRSPRTLRSM Trigger: CATCGACCGCAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS GCA 72 bp | TGCGGTCGATGTCGCCATTCTCCAGCAAGACTTCAGTaGCAAAGGCCTCTACTATACGCCGGTGGGCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: CGRCRHSPARLQ*QRPLLYAGGQD Trigger: ATCCTGCCCACCGGCGTATAGTAGAGGCCTTTGGCACTGAAGTCTTGCTGGAGAATGGCGACATCGACCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 72 bp | ATGACGTCCACGTCGATTACAGCACAGCCCAGCTGTTaGAATACCTGGATGACGGAGCTCTTGCCTGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: MTSTSITAQPSC*NTWMTELLPEA Trigger: CGCCTCAGGCAAGAGCTCCGTCATCCAGGTATTCCAACAGCTGGGCTGTGCTGTAATCGACGTGGACGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CAA 72 bp | CGGTCAGGCTGGTTGAAGATCAGGTCTCCGAGGACCTaGCGGTCGATGTCGCCATTCTCCAGCAAGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSGWLKIRSPRT*RSMSPFSSKTS Trigger: TGAAGTCTTGCTGGAGAATGGCGACATCGACCGCAAGGTCCTCGGAGACCTGATCTTCAACCAGCCTGACCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CAA 90 bp | GTCTCCTTCATCATTTCCTTGCGGATCTCAGGGTGGGTAATGGAGTaGAGCAGCTGCCGACGGTCAGGCTGGTTGAAGATCAGGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: VSFIISLRISGWVME*SSCRRSGWLKIRSP Trigger: CGGAGACCTGATCTTCAACCAGCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGAGATCCGCAAGGAAATGATGAAGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
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| CDS CCA 72 bp | AAGGTCTCCTTCATCATTTCCTTGCGGATCTCAGGGTaGGTAATGGAGTTGAGCAGCTGCCGACGGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KVSFIISLRISG*VMELSSCRRSG Trigger: GCCTGACCGTCGGCAGCTGCTCAACTCCATTACCCACCCTGAGATCCGCAAGGAAATGATGAAGGAGACCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
||
| CDS CAA 72 bp | CGGAGAAAGTACTTGAAGGTCTCCTTCATCATTTCCTaGCGGATCTCAGGGTGGGTAATGGAGTTGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RRKYLKVSFIIS*RISGWVMELSS Trigger: GCTGCTCAACTCCATTACCCACCCTGAGATCCGCAAGGAAATGATGAAGGAGACCTTCAAGTACTTTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021313.9 ENSMUST00000155490.3 |
||
| CDS TCA 72 bp | CCAGAATCACGTATCGGTAGCCTCGGAGAAAGTACTTaGAGGTCTCCTTCATCATTTCCTTGCGGATCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PESRIGSLGEST*RSPSSFPCGSQ Trigger: CTGAGATCCGCAAGGAAATGATGAAGGAGACCTTCAAGTACTTTCTCCGAGGCTACCGATACGTGATTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
||
| CDS CAA 90 bp | TGTGTATCACGGTCACAGTACACTACCACTGTGTGCTTCATATACTaGAGCAGCTTCTTGGTCTCAAACAGGAGGGGGATGTCCAGAATC | + |
|
Preference number: 6 (lower is better) Translates to: CVSRSQYTTTVCFIY*SSFLVSNRRGMSRI Trigger: GATTCTGGACATCCCCCTCCTGTTTGAGACCAAGAAGCTGCTCAAGTATATGAAGCACACAGTGGTAGTGTACTGTGACCGTGATACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
||
| CDS GCA 72 bp | AGCTGTGTATCACGGTCACAGTACACTACCACTGTGTaGTTCATATACTTGAGCAGCTTCTTGGTCTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCVSRSQYTTTV*FIYLSSFLVSN Trigger: GTTTGAGACCAAGAAGCTGCTCAAGTATATGAAGCACACAGTGGTAGTGTACTGTGACCGTGATACACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021313.9 |
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