Pregenerated sensors for DCAF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026571Ensembl transcript IDs: ENSMUST00000027856.13, ENSMUST00000194869.6, ENSMUST00000195220.2
Found 111 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAATGTCTGAAGTGGAGGTaGATGCTAGAGTCAGCTAAC | + |
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Preference number: 2 (lower is better) Translates to: KHGKVHTVQENTVRYTQECLKWR*MLESAN Trigger: GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACA...TTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR-3UTR TCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCCAGAAGACAGCACCTTaGGTTTGTGCTAATGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: KHGKVHTVQENTVRYTQAQKTAP*VCANVN Trigger: ATTTACATTAGCACAAACTCAAGGTGCTGTCTTCTG...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR CCA 72 bp | GACAGACAACGTAGGAGGTGGAAGAGGTCATGTCTATaGAGCAGTTCAGGAAAACACGGTGAGGTACACACA | + |
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Preference number: 3 (lower is better) Translates to: DRQRRRWKRSCL*SSSGKHGEVHT Trigger: TGTGTGTACCTCACCGTGTTTTCCTGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR CCA 72 bp | ATTGGATTGAGGGGCACAGACAGACAACGTAGGAGGTaGAAGAGGTCATGTCTATGGAGCAGTTCAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: IGLRGTDRQRRR*KRSCLWSSSGK Trigger: TTTTCCTGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTCTGTGCCCCTCAATCCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR-3UTR CAA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCAAAATGACTTCAGCATaGATCCAAGCTCCCACAGCG | + |
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Preference number: 3 (lower is better) Translates to: KHGKVHTVQENTVRYTQAKMTSA*IQAPTA Trigger: CGCTGTGGGAGCTTGGATCAATGCTGAAGTCATTTT...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR CCA 72 bp | GCCCTTTTACATTATCTGGTCACACAGAGGTCAAGATaGAAAGGACTATTAAATTCAGAAAACAGCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: ALLHYLVTQRSR*KGLLNSENSKP Trigger: GGGCTTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR-3UTR CAA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCATTCCAAACCAATGTTaGGTTATCCCCAAAATAGGG | + |
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Preference number: 3 (lower is better) Translates to: YLVTQRSRWKGLLNSENSIPNQC*VIPKIG Trigger: CCCTATTTTGGGGATAACCAAACATTGGTTTGGAAT...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | CACACAGGCCTGGGGGACTGTCTGAAGTGGAGGTGGATGCTAGAGTCAGCTAACACTGTCTCCTTCCGGTaGCTGCACAGAGCTCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HTGLGDCLKWRWMLESANTVSFR*LHRARR Trigger: CCTCCGAGCTCTGTGCAGCCACCGGAAGGAGACAGT...GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACAGTCCCCCAGGCCTGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | CACACAGGCCTGGGGGACTGTCTGAAGTGGAGGTGGATGCTAGAGTCAGCTAACCTCTCAGTGCTGGCCTaGTCACAAGTCTCCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: HTGLGDCLKWRWMLESANLSVLA*SQVSLS Trigger: AGACAGGGAGACTTGTGAGCAGGCCAGCACTGAGAG...GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACAGTCCCCCAGGCCTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | GGCACAGACAGACAACGTAGGAGGTGGAAGAGGTCATGTCTATGGAGCAGTTCACTCCTGAAGAACTCCTaGATGCGGGCAACAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GTDRQRRRWKRSCLWSSSLLKNS*MRATAE Trigger: CTCCGCTGTTGCCCGCATTCAGGAGTTCTTCAGGAG...TGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTCTGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | CACACAGGCCTGGGGGACTGTCTGAAGTGGAGGTGGATGCTAGAGTCAGCTAACGAGCTAAAGGTGCTATaGCTTCTGTCTGGGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: HTGLGDCLKWRWMLESANELKVL*LLSGMG Trigger: TCCCATCCCAGACAGAAGCCATAGCACCTTTAGCTC...GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACAGTCCCCCAGGCCTGTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | CACACAGGCCTGGGGGACTGTCTGAAGTGGAGGTGGATGCTAGAGTCAGCTAACTTTCTTTTCTCCTCCTaGAGAACTCCTGAATGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HTGLGDCLKWRWMLESANFLFSS*RTPECG Trigger: CCCGCATTCAGGAGTTCTTCAGGAGGAGAAAAGAAA...GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACAGTCCCCCAGGCCTGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | GGCACAGACAGACAACGTAGGAGGTGGAAGAGGTCATGTCTATGGAGCAGTTCATGCTGGCCTGCTCAATaGCTTCTGTCTGGGATGGGA | + |
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Preference number: 4 (lower is better) Translates to: GTDRQRRRWKRSCLWSSSCWPAQ*LLSGMG Trigger: TCCCATCCCAGACAGAAGCCATTGAGCAGGCCAGCA...TGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTCTGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | GGCACAGACAGACAACGTAGGAGGTGGAAGAGGTCATGTCTATGGAGCAGTTCAGGCTTCTGTCTGGGATaGGAGTTCAGGATTGGCACT | + |
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Preference number: 4 (lower is better) Translates to: GTDRQRRRWKRSCLWSSSGFCLG*EFRIGT Trigger: AGTGCCAATCCTGAACTCCCATCCCAGACAGAAGCC...TGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTCTGTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | CACACAGGCCTGGGGGACTGTCTGAAGTGGAGGTGGATGCTAGAGTCAGCTAACCTCATTACTGTTATCTaGCTGATGATGTGCATGGTG | + |
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Preference number: 4 (lower is better) Translates to: HTGLGDCLKWRWMLESANLITVI*LMMCMV Trigger: CACCATGCACATCATCAGTCAGATAACAGTAATGAG...GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACAGTCCCCCAGGCCTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | GGCACAGACAGACAACGTAGGAGGTGGAAGAGGTCATGTCTATGGAGCAGTTCAGCAGATGGGTCTTCATaGGCTAAAGGTGCTATGGCT | + |
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Preference number: 4 (lower is better) Translates to: GTDRQRRRWKRSCLWSSSADGSS*AKGAMA Trigger: AGCCATAGCACCTTTAGCTCATGAAGACCCATCTGC...TGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTCTGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCGGCTTGGTGCTAGCATaGCTGGTAGCACTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KHGKVHTVQENTVRYTQAGLVLA*LVALSV Trigger: CACTGAGAGTGCTACCAGGCATGCTAGCACCAAGCC...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCGGCTTCTGTCTGGGATaGGAGTTCAGGCTTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: KHGKVHTVQENTVRYTQAGFCLG*EFRLGA Trigger: AGCACCAAGCCTGAACTCCCATCCCAGACAGAAGCC...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | GGCACAGACAGACAACGTAGGAGGTGGAAGAGGTCATGTCTATGGAGCAGTTCAAAATGCTCAGCAGTGTaGCGGTCCCAGATGAAGATA | + |
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Preference number: 4 (lower is better) Translates to: GTDRQRRRWKRSCLWSSSKCSAV*RSQMKI Trigger: TATCTTCATCTGGGACCGGCACACTGCTGAGCATTT...TGAACTGCTCCATAGACATGACCTCTTCCACCTCCTACGTTGTCTGTCTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGATTGGGTCAAACGGATaGGGCTGCAGGCAGTTGACC | + |
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Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRIGSNG*GCRQLT Trigger: GGTCAACTGCCTGCAGCCCCATCCGTTTGACCCAAT...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGGGATTGGCACTGGTATaGCTGGTAGCACTCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRGLALV*LVALSV Trigger: CACTGAGAGTGCTACCAGGCATACCAGTGCCAATCC...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACACACCTGTCCCTGGTTTaGGGCTCAGCCTCTCATTAC | + |
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Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTHLSLV*GSASHY Trigger: GTAATGAGAGGCTGAGCCCCAAACCAGGGACAGGTG...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCGGGTTCACCTGTCCCTaGTTTGGGGCTCAGCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSGFTCP*FGAQPL Trigger: GAGAGGCTGAGCCCCAAACCAGGGACAGGTGAACCC...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGAGTAGTTCCTCGGCCTaGATAATTCCCTGTAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRSSSSA*IIPCSS Trigger: AGAGCTACAGGGAATTATGCAGGCCGAGGAACTACT...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCTATGGCGGCTGTGGCTaGCTGAGCCTGAACTGGATC | + |
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Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSYGGCG*LSLNWI Trigger: GATCCAGTTCAGGCTCAGGCAGCCACAGCCGCCATA...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACAGATTTGTTCCACCTCTaGGCCGAGGTCTTCCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTDLFHL*AEVFLF Trigger: GAAGAGGAAGACCTCGGCCCAGAGGTGGAACAAATC...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACAGTTGAAACATCTGGCTaGTTTGTTCCACCTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTVETSG*FVPPLG Trigger: GCCCAGAGGTGGAACAAATCAGCCAGATGTTTCAAC...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCTTCCAAATTAGGACTTaGTGGAACCGTAGGAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: KHGKVHTVQENTVRYTQAFQIRT*WNRRKS Trigger: ACTCTTCCTACGGTTCCATCAAGTCCTAATTTGGAA...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCTTTCTATGGCGGCTGTaGCTGCCTGAGCCTGAACTG | + |
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Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSFLWRL*LPEPEL Trigger: CAGTTCAGGCTCAGGCAGCCACAGCCGCCATAGAAA...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAACCCTCAGATTTGCAATaGCTCCCATTTCCTCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: KHGKVHTVQENTVRYTQEPSDLQ*LPFPLE Trigger: TTCCAGAGGAAATGGGAGCCATTGCAAATCTGAGGG...TTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| 3UTR CAA 72 bp | GTAAGTAGGTTGGAGAAATGTACAGATGTAATTGGATaGAGGGGCACAGACAGACAACGTAGGAGGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: VSRLEKCTDVIG*RGTDRQRRRWK Trigger: CTTCCACCTCCTACGTTGTCTGTCTGTGCCCCTCAATCCAATTACATCTGTACATTTCTCCAACCTACTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACAATTTGCTCGATGCCCTaGACGGATGGTTGTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTICSMP*TDGCQN Trigger: GTTTTGACAACCATCCGTTCAGGGCATCGAGCAAAT...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGAACCGTAGGAAGAGTTaGAACATCTGGCTGATTTGT | + |
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Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRNRRKS*NIWLIC Trigger: ACAAATCAGCCAGATGTTTCAACTCTTCCTACGGTT...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAAGAGGATGTAGAAGGCTaGAGAAGTGCAGCTGGCATG | + |
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Preference number: 4 (lower is better) Translates to: SGHTEVKMERTIKFRKQQEDVEG*RSAAGM Trigger: CATGCCAGCTGCACTTCTTCAGCCTTCTACATCCTC...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAATCGGATATGATTCAGTaGCGCCAACATCCTCAACAT | + |
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Preference number: 4 (lower is better) Translates to: KHGKVHTVQENTVRYTQESDMIQ*RQHPQH Trigger: ATGTTGAGGATGTTGGCGTCACTGAATCATATCCGA...TTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCCGGTCAGCTCGGATATaGTTCAGTGACGCCAACATC | + |
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Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSRSARI*FSDANI Trigger: GATGTTGGCGTCACTGAATCATATCCGAGCTGACCG...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGTCATTTTCATTCTCCTaGCCTGAACCTTCTGATCTG | + |
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Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRSFSFS*PEPSDL Trigger: CAGATCAGAAGGTTCAGGTCAGGAGAATGAAAATGA...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGTCTGCTTATCATCTGTaGACGGCAAAAACTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRSAYHL*TAKTLH Trigger: GTGCAAAGTTTTTGCCGTGCACAGATGATAAGCAGA...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACAGACACATTGGGACTTTaGTCTCCATCTCGTTCTCGT | + |
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Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTDTLGL*SPSRSR Trigger: ACGAGAACGAGATGGAGAGCAAAGTCCCAATGTGTC...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR GCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCTCCAGAAGCATCAAATaGTCAGCAGTGTGCCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSSRSIK*SAVCRS Trigger: GGACCGGCACACTGCTGAGCATTTGATGCTTCTGGA...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | CCTTTTACATTATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCGGGGCTGCAGGCAGTTaGCCACATGATTATCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PFTLSGHTEVKMERTIKFGAAGS*PHDYQL Trigger: AAGCTGATAATCATGTGGTCAACTGCCTGCAGCCCC...GAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | CCTTTTACATTATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCCAAAGTGCCTTCTTCTaGAAGCCCACAAGGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PFTLSGHTEVKMERTIKFQSAFF*KPTRAV Trigger: GACAGCCCTTGTGGGCTTCCAGAAGAAGGCACTTTG...GAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCTCCCAGATGAAGATATaGCCACAATCGGAACCGCTC | + |
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Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSSQMKI*PQSEPL Trigger: GAGCGGTTCCGATTGTGGCCATATCTTCATCTGGGA...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CCA 90 bp | CCTTTTACATTATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCCAACATGAAAGAGGCTaGGACGGTGATGGTGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: PFTLSGHTEVKMERTIKFQHERG*DGDGVP Trigger: CGGAACACCATCACCGTCCCAGCCTCTTTCATGTTG...GAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAAACCAAGCATTCTTCCTaGCCCTCAGATTTGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SGHTEVKMERTIKFRKQQTKHSS*PSDLQW Trigger: CCATTGCAAATCTGAGGGTCAGGAAGAATGCTTGGT...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACAGTTATTCTTCTCTCCTaGGTTAGAATCCAATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTVILLS*VRIQWL Trigger: GAGCCATTGGATTCTAACTCAGGAGAGAAGAATAAC...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR TCA 90 bp | TATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAGGCAGTTGACCACATaGTTATCAGCTTCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YLVTQRSRWKGLLNSENSRQLTT*LSASRS Trigger: GCTTCTGGAAGCTGATAATCATGTGGTCAACTGCCT...GCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR GCA 90 bp | GTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAAACACGGTAAGGGCACGGCAAAAACTTTaGACTAAATATATTTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VHTVQENTVRYTQENTVRARQKL*TKYICS Trigger: CGAGCAAATATATTTAGTGCAAAGTTTTTGCCGTGC...CCTTACCGTGTTTTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR GCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACATTCCTCTTCCTCTGTTaGTTTGTGCAACTTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTFLFLC*FVQLHL Trigger: CAAGTGAAGTTGCACAAAGCAACAGAGGAAGAGGAA...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR GCA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAAAGAAGGCTGAAGAAGTaGAGCTGGCATGTCTACATC | + |
|
Preference number: 4 (lower is better) Translates to: SGHTEVKMERTIKFRKQQRRLKK*SWHVYI Trigger: GATGTAGACATGCCAGCTGCACTTCTTCAGCCTTCT...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR GCA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCTTATGTCATAATCTATaGCAGATGAGGCTAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: KHGKVHTVQENTVRYTQALCHNL*QMRLEL Trigger: CAATTCTAGCCTCATCTGGCATAGATTATGACATAA...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR GCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACACATGTCTACATCCATTaGAGTTTCACACACTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTHVYIH*SFTHFQ Trigger: TTGGAAGTGTGTGAAACTGCAATGGATGTAGACATG...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACACAGCACGCCTACAGTTaGTTAAAATATCATCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTQHAYS*LKYHLY Trigger: GTAAAGATGATATTTTAATCAACTGTAGGCGTGCTG...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR TCA 90 bp | CCTTTTACATTATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCATCATAAATCCGTACTaGGCTGTCAGAACAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFTLSGHTEVKMERTIKFIINPY*AVRTTH Trigger: GTGGGTTGTTCTGACAGCTCAGTACGGATTTATGAT...GAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR TCA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAAGTATCTATCTGGTTTTaGGTGAGGTTTTCTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGHTEVKMERTIKFRKQQVSIWF*VRFSGS Trigger: ACTTCCAGAAAACCTCACTCAAAACCAGATAGATAC...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR GCA 90 bp | AAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGTTCAGGAAAACAGAAGTTATCAAGTTGTaGTGTATCTATCTGGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVHTVQENTVRYTQFRKTEVIKL*CIYLVL Trigger: CAAAACCAGATAGATACAGCACAACTTGATAACTTC...TGTTTTCCTGAACTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS CCA 90 bp | GGTCCCGTGAAGAGCCCTCGTGAGGAGGAGGATCAGAAGTGGAAGTaGGAGGCTGATGCTGGGCCTGTGCTAGCTCTTGCTGCCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPVKSPREEEDQKWK*EADAGPVLALAASA Trigger: AGCAGAGGCAGCAAGAGCTAGCACAGGCCCAGCATCAGCCTCCCACTTCCACTTCTGATCCTCCTCCTCACGAGGGCTCTTCACGGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194869.6 |
||
| CDS GCA 90 bp | GCGGGCAACAGCGGAGCGTCTATCACCAGGTCCTGTTCGGTATCTTaGACCAGGGATCAAGACCGGATCATCATCGCTGTCATCTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGNSGASITRSCSVS*TRDQDRIIIAVICV Trigger: GACACAGATGACAGCGATGATGATCCGGTCTTGATCCCTGGTGCAAGATACCGAACAGGACCTGGTGATAGACGCTCCGCTGTTGCCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS CCA 90 bp | GGTAGCACTCTCAGTGCTGGCCTGCTCAATGGCTTCTGTCTGGGATaGGAGTTCAGGCTTGGTGCTAGCATGCCTGGTAGCACTCTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GSTLSAGLLNGFCLG*EFRLGASMPGSTLS Trigger: ACTGAGAGTGCTACCAGGCATGCTAGCACCAAGCCTGAACTCCCATCCCAGACAGAAGCCATTGAGCAGGCCAGCACTGAGAGTGCTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR CAA 90 bp | CACACAGGCCTGGGGGACTGTCTGAAGTGGAGGTGGATGCTAGAGTCAGCTAACGATGGGAGTTCAGGCTaGGTGCTAGCATGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HTGLGDCLKWRWMLESANDGSSG*VLACLV Trigger: TACCAGGCATGCTAGCACCAAGCCTGAACTCCCATC...GTTAGCTGACTCTAGCATCCACCTCCACTTCAGACAGTCCCCCAGGCCTGTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS TCA 90 bp | CCTTCCGGTGGCTGCACAGAGCTCGGAGGGACCAAGCATTCTTCCTaGCCCTCAGATTTGCAATGGCTCCCATTTCCTCTGGAACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSGGCTELGGTKHSS*PSDLQWLPFPLELE Trigger: CTCAAGTTCCAGAGGAAATGGGAGCCATTGCAAATCTGAGGGTCAGGAAGAATGCTTGGTCCCTCCGAGCTCTGTGCAGCCACCGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 ENSMUST00000195220.2 |
||
| CDS GCA 90 bp | GCTATGGCTTCTGTCTGGGATGGGAGTTCAGGATTGGCACTGGTATaGCTGGTAGCACTCTCAGTGCTGGCCTGCTCAATGGCTTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AMASVWDGSSGLALV*LVALSVLACSMASV Trigger: GACAGAAGCCATTGAGCAGGCCAGCACTGAGAGTGCTACCAGGCATACCAGTGCCAATCCTGAACTCCCATCCCAGACAGAAGCCATAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS GCA 90 bp | GCACAGAGCTCGGAGGGACCAAGCATTCTTCCTGACCCTCAGATTTaGAATGGCTCCCATTTCCTCTGGAACTTGAGGCTGTACTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQSSEGPSILPDPQI*NGSHFLWNLRLYCS Trigger: GGAGCAGTACAGCCTCAAGTTCCAGAGGAAATGGGAGCCATTGCAAATCTGAGGGTCAGGAAGAATGCTTGGTCCCTCCGAGCTCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 ENSMUST00000195220.2 |
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| CDS TCA 90 bp | TCATCTGTGTCCTGGAGAGCAGAGTCCCTGGCAGATGGGTCTTCATaGGCTAAAGGTGCTATGGCTTCTGTCTGGGATGGGAGTTCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVSWRAESLADGSS*AKGAMASVWDGSSG Trigger: TCCTGAACTCCCATCCCAGACAGAAGCCATAGCACCTTTAGCTCATGAAGACCCATCTGCCAGGGACTCTGCTCTCCAGGACACAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS GCA 90 bp | TCAGGCTTGGTGCTAGCATGCCTGGTAGCACTCTCAGTGCTGGCCTaGTCACAAGTCTCCCTGTCTGTTTCAGACAAAGTGCCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGLVLACLVALSVLA*SQVSLSVSDKVPSS Trigger: AGAAGAAGGCACTTTGTCTGAAACAGACAGGGAGACTTGTGAGCAGGCCAGCACTGAGAGTGCTACCAGGCATGCTAGCACCAAGCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
||
| CDS TCA 90 bp | GCTAGAATTGGGTCAAACGGATGGGGCTGCAGGCAGTTGACCACATaGTTATCAGCTTCCAGAAGCATCAAATGCTCAGCAGTGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARIGSNGWGCRQLTT*LSASRSIKCSAVCR Trigger: CCGGCACACTGCTGAGCATTTGATGCTTCTGGAAGCTGATAATCATGTGGTCAACTGCCTGCAGCCCCATCCGTTTGACCCAATTCTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR CAA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCTCACCTGTCCCTGGTTaGGGGCTCAGCCTCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: KHGKVHTVQENTVRYTQASPVPG*GLSLSL Trigger: TAATGAGAGGCTGAGCCCCAAACCAGGGACAGGTGA...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS TCA 90 bp | CAGATGAGGCTAGAATTGGGTCAAACGGATGGGGCTGCAGGCAGTTaGCCACATGATTATCAGCTTCCAGAAGCATCAAATGCTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QMRLELGQTDGAAGS*PHDYQLPEASNAQQ Trigger: CTGCTGAGCATTTGATGCTTCTGGAAGCTGATAATCATGTGGTCAACTGCCTGCAGCCCCATCCGTTTGACCCAATTCTAGCCTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR CAA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGCCAAACATCTGGCTGATTaGTTCCACCTCTGGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: KHGKVHTVQENTVRYTQAKHLAD*FHLWAE Trigger: CTCGGCCCAGAGGTGGAACAAATCAGCCAGATGTTT...GGCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS TCA 90 bp | TGGAAGCCCACAAGGGCTGTCCTGACTTGGGTTATTCTTCTCTCCTaGGTTAGAATCCAATGGCTCAGCTGGGAAGTTATCAAGTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WKPTRAVLTWVILLS*VRIQWLSWEVIKLC Trigger: GCACAACTTGATAACTTCCCAGCTGAGCCATTGGATTCTAACTCAGGAGAGAAGAATAACCCAAGTCAGGACAGCCCTTGTGGGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS CCA 90 bp | AGAAGCATCAAATGCTCAGCAGTGTGCCGGTCCCAGATGAAGATATaGCCACAATCGGAACCGCTCATTACAAAGTTAGCACCCCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RSIKCSAVCRSQMKI*PQSEPLITKLAPQK Trigger: TTTCTGGGGTGCTAACTTTGTAATGAGCGGTTCCGATTGTGGCCATATCTTCATCTGGGACCGGCACACTGCTGAGCATTTGATGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS CCA 90 bp | CTGTGCTGTAGTGCAAACTTAAAACGGGTTCACCTGTCCCTGGTTTaGGGCTCAGCCTCTCATTACTGTTATCCTGTTGCTCATCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LCCSANLKRVHLSLV*GSASHYCYPVAHQV Trigger: CACTTGATGAGCAACAGGATAACAGTAATGAGAGGCTGAGCCCCAAACCAGGGACAGGTGAACCCGTTTTAAGTTTGCACTACAGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194869.6 ENSMUST00000195220.2 |
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| CDS CCA 90 bp | CTGTGCTGTAGTGCAAACTTAAAACGGGTTCACCTGTCCCTGGTTTaGGGCTCAGCCTCTCATTACTGTTATCTGACTGATGATGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCCSANLKRVHLSLV*GSASHYCYLTDDVH Trigger: ATGCACATCATCAGTCAGATAACAGTAATGAGAGGCTGAGCCCCAAACCAGGGACAGGTGAACCCGTTTTAAGTTTGCACTACAGCACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CAA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAAGTTCTTCAGGAGCTCTaGTTTCACTGTCTCCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KHGKVHTVQENTVRYTQEVLQEL*FHCLLP Trigger: CGGAAGGAGACAGTGAAACAAGAGCTCCTGAAGAAC...TTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CAA 90 bp | AAACACGGTAAGGTACACACAGTTCAGGAAAACACGGTAAGGTACACACAGGAATTTGTGCAACTTCACTaGCTTCTTCAAACCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KHGKVHTVQENTVRYTQEFVQLH*LLQTTL Trigger: CAAGGTGGTTTGAAGAAGCAAGTGAAGTTGCACAAA...TTCCTGTGTGTACCTTACCGTGTTTTCCTGAACTGTGTGTACCTTACCGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR CAA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAAAAGGGCTGTCCTGACTaGGGTTATTCTTCTCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SGHTEVKMERTIKFRKQQKGCPD*GYSSLL Trigger: CAGGAGAGAAGAATAACCCAAGTCAGGACAGCCCTT...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CAA 90 bp | CCTTTTACATTATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCGATGGGAGTTCAGGATaGGCACTGGTATGCCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: PFTLSGHTEVKMERTIKFDGSSG*ALVCLV Trigger: TACCAGGCATACCAGTGCCAATCCTGAACTCCCATC...GAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS TCA 90 bp | CAGCTGGGAAGTTATCAAGTTGTGCTGTATCTATCTGGTTTTGAGTaGGGTTTTCTGGAAGTGTTCCTTTCTCTGATAGTTCTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLGSYQVVLYLSGFE*GFLEVFLSLIVLQE Trigger: CTCCTGAAGAACTATCAGAGAAAGGAACACTTCCAGAAAACCTCACTCAAAACCAGATAGATACAGCACAACTTGATAACTTCCCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS TCA 90 bp | GGCTCAGCTGGGAAGTTATCAAGTTGTGCTGTATCTATCTGGTTTTaGGTGAGGTTTTCTGGAAGTGTTCCTTTCTCTGATAGTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSAGKLSSCAVSIWF*VRFSGSVPFSDSSS Trigger: TGAAGAACTATCAGAGAAAGGAACACTTCCAGAAAACCTCACTCAAAACCAGATAGATACAGCACAACTTGATAACTTCCCAGCTGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
||
| CDS-3UTR CAA 90 bp | CCTTTTACATTATCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCGCCCTGAACGGATGGTaGTCAAAACCTTTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PFTLSGHTEVKMERTIKFALNGW*SKPFCC Trigger: ACAGCAGAAAGGTTTTGACAACCATCCGTTCAGGGC...GAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGATAATGTAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS-3UTR CAA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAATGTATCTATCTGGTTTaGAGTGAGGTTTTCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SGHTEVKMERTIKFRKQQCIYLV*SEVFWK Trigger: CTTCCAGAAAACCTCACTCAAAACCAGATAGATACA...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS-3UTR CAA 90 bp | TCTGGTCACACAGAGGTCAAGATGGAAAGGACTATTAAATTCAGAAAACAGCAATGGGAAGTTATCAAGTaGTGCTGTATCTATCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGHTEVKMERTIKFRKQQWEVIK*CCIYLV Trigger: AACCAGATAGATACAGCACAACTTGATAACTTCCCA...TTGCTGTTTTCTGAATTTAATAGTCCTTTCCATCTTGACCTCTGTGTGACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS GCA 72 bp | TGCCTCTGCTGCTCAGCCTTCTTAAGCCTCAGCTGCTaGAGGCGCTTACGGAGCAAAGCTATCTCAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: CLCCSAFLSLSC*RRLRSKAISGP Trigger: GGGGCCTGAGATAGCTTTGCTCCGTAAGCGCCTGCAGCAGCTGAGGCTTAAGAAGGCTGAGCAGCAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194869.6 |
||
| CDS CCA 72 bp | GGCAAGACAGCAACGAGCTGGAACGAGGGCTTTCTATaGCGGCTGTGGCTGCCTGAGCCTGAACTGGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GKTATSWNEGFL*RLWLPEPELDL Trigger: CAGATCCAGTTCAGGCTCAGGCAGCCACAGCCGCCATAGAAAGCCCTCGTTCCAGCTCGTTGCTGTCTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS CCA 72 bp | AAGAGCCCTCGTGAGGAGGAGGATCAGAAGTGGAAGTaGGAGGCTGATGCTGGGCCTGTGCTAGCTCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: KSPREEEDQKWK*EADAGPVLALA Trigger: AGCAAGAGCTAGCACAGGCCCAGCATCAGCCTCCCACTTCCACTTCTGATCCTCCTCCTCACGAGGGCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194869.6 |
||
| CDS CAA 90 bp | TGCGGGCAACAGCGGAGCGTCTATCACCAGGTCCTGTTCGGTATCTaGCACCAGGGATCAAGACCGGATCATCATCGCTGTCATCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: CGQQRSVYHQVLFGI*HQGSRPDHHRCHLC Trigger: ACACAGATGACAGCGATGATGATCCGGTCTTGATCCCTGGTGCAAGATACCGAACAGGACCTGGTGATAGACGCTCCGCTGTTGCCCGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS TCA 72 bp | GGCTGCACAGAGCTCGGAGGGACCAAGCATTCTTCCTaGCCCTCAGATTTGCAATGGCTCCCATTTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GCTELGGTKHSS*PSDLQWLPFPL Trigger: CAGAGGAAATGGGAGCCATTGCAAATCTGAGGGTCAGGAAGAATGCTTGGTCCCTCCGAGCTCTGTGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 ENSMUST00000195220.2 |
||
| CDS GCA 72 bp | TCTGTCTGGGATGGGAGTTCAGGATTGGCACTGGTATaGCTGGTAGCACTCTCAGTGCTGGCCTGCTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SVWDGSSGLALV*LVALSVLACSM Trigger: CATTGAGCAGGCCAGCACTGAGAGTGCTACCAGGCATACCAGTGCCAATCCTGAACTCCCATCCCAGACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS GCA 72 bp | AGCGGAGCGTCTATCACCAGGTCCTGTTCGGTATCTTaGACCAGGGATCAAGACCGGATCATCATCGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGASITRSCSVS*TRDQDRIIIAV Trigger: GACAGCGATGATGATCCGGTCTTGATCCCTGGTGCAAGATACCGAACAGGACCTGGTGATAGACGCTCCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS CAA 72 bp | GGTGCTATGGCTTCTGTCTGGGATGGGAGTTCAGGATaGGCACTGGTATGCCTGGTAGCACTCTCAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GAMASVWDGSSG*ALVCLVALSVL Trigger: CAGCACTGAGAGTGCTACCAGGCATACCAGTGCCAATCCTGAACTCCCATCCCAGACAGAAGCCATAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS CAA 72 bp | CAGCGGAGCGTCTATCACCAGGTCCTGTTCGGTATCTaGCACCAGGGATCAAGACCGGATCATCATCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QRSVYHQVLFGI*HQGSRPDHHRC Trigger: ACAGCGATGATGATCCGGTCTTGATCCCTGGTGCAAGATACCGAACAGGACCTGGTGATAGACGCTCCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
||
| CDS TCA 72 bp | GTCACCCTCCAGACGGTCAGCTCGGATATGATTCAGTaGCGCCAACATCCTCAACATGAAAGAGGCTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VTLQTVSSDMIQ*RQHPQHERGWD Trigger: GTCCCAGCCTCTTTCATGTTGAGGATGTTGGCGTCACTGAATCATATCCGAGCTGACCGTCTGGAGGGTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS GCA 72 bp | GTGCTAGCATGCCTGGTAGCACTCTCAGTGCTGGCCTaGTCACAAGTCTCCCTGTCTGTTTCAGACAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: VLACLVALSVLA*SQVSLSVSDKV Trigger: CACTTTGTCTGAAACAGACAGGGAGACTTGTGAGCAGGCCAGCACTGAGAGTGCTACCAGGCATGCTAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS CCA 72 bp | TTCTTCAGGAGCTCTTGTTTCACTGTCTCCTTCCGGTaGCTGCACAGAGCTCGGAGGGACCAAGCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: FFRSSCFTVSFR*LHRARRDQAFF Trigger: GAAGAATGCTTGGTCCCTCCGAGCTCTGTGCAGCCACCGGAAGGAGACAGTGAAACAAGAGCTCCTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 ENSMUST00000195220.2 |
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| CDS CCA 72 bp | CCCTGGCAGATGGGTCTTCATGAGCTAAAGGTGCTATaGCTTCTGTCTGGGATGGGAGTTCAGGATTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PWQMGLHELKVL*LLSGMGVQDWH Trigger: GTGCCAATCCTGAACTCCCATCCCAGACAGAAGCCATAGCACCTTTAGCTCATGAAGACCCATCTGCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS GCA 72 bp | TCGGAGGGACCAAGCATTCTTCCTGACCCTCAGATTTaGAATGGCTCCCATTTCCTCTGGAACTTGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SEGPSILPDPQI*NGSHFLWNLRL Trigger: CAGCCTCAAGTTCCAGAGGAAATGGGAGCCATTGCAAATCTGAGGGTCAGGAAGAATGCTTGGTCCCTCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 ENSMUST00000195220.2 |
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| CDS CAA 90 bp | GGTTTTCTGGAAGTGTTCCTTTCTCTGATAGTTCTTCAGGAGCTCTaGTTTCACTGTCTCCTTCCGGTGGCTGCACAGAGCTCGGAGGGA | + |
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Preference number: 6 (lower is better) Translates to: GFLEVFLSLIVLQEL*FHCLLPVAAQSSEG Trigger: TCCCTCCGAGCTCTGTGCAGCCACCGGAAGGAGACAGTGAAACAAGAGCTCCTGAAGAACTATCAGAGAAAGGAACACTTCCAGAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 ENSMUST00000195220.2 |
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| CDS TCA 72 bp | GGGTCAAACGGATGGGGCTGCAGGCAGTTGACCACATaGTTATCAGCTTCCAGAAGCATCAAATGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GSNGWGCRQLTT*LSASRSIKCSA Trigger: TGCTGAGCATTTGATGCTTCTGGAAGCTGATAATCATGTGGTCAACTGCCTGCAGCCCCATCCGTTTGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS TCA 72 bp | GAAGCATCAAATGCTCAGCAGTGTGCCGGTCCCAGATaGAGATATGGCCACAATCGGAACCGCTCATTACAA | + |
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Preference number: 6 (lower is better) Translates to: EASNAQQCAGPR*RYGHNRNRSLQ Trigger: TTGTAATGAGCGGTTCCGATTGTGGCCATATCTTCATCTGGGACCGGCACACTGCTGAGCATTTGATGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS TCA 72 bp | TCTGATCTGTCACCCTCCAGACGGTCAGCTCGGATATaGTTCAGTGACGCCAACATCCTCAACATGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: SDLSPSRRSARI*FSDANILNMKE Trigger: CTCTTTCATGTTGAGGATGTTGGCGTCACTGAATCATATCCGAGCTGACCGTCTGGAGGGTGACAGATCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS CCA 72 bp | AGTCTCCCTGTCTGTTTCAGACAAAGTGCCTTCTTCTaGAAGCCCACAAGGGCTGTCCTGACTTGGGTTATT | + |
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Preference number: 6 (lower is better) Translates to: SLPVCFRQSAFF*KPTRAVLTWVI Trigger: AATAACCCAAGTCAGGACAGCCCTTGTGGGCTTCCAGAAGAAGGCACTTTGTCTGAAACAGACAGGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS GCA 72 bp | TTATCAGCTTCCAGAAGCATCAAATGCTCAGCAGTGTaGCGGTCCCAGATGAAGATATGGCCACAATCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LSASRSIKCSAV*RSQMKIWPQSE Trigger: TTCCGATTGTGGCCATATCTTCATCTGGGACCGGCACACTGCTGAGCATTTGATGCTTCTGGAAGCTGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS CCA 72 bp | AAATGCTCAGCAGTGTGCCGGTCCCAGATGAAGATATaGCCACAATCGGAACCGCTCATTACAAAGTTAGCA | + |
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Preference number: 6 (lower is better) Translates to: KCSAVCRSQMKI*PQSEPLITKLA Trigger: TGCTAACTTTGTAATGAGCGGTTCCGATTGTGGCCATATCTTCATCTGGGACCGGCACACTGCTGAGCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS CCA 72 bp | AGTGCAAACTTAAAACGGGTTCACCTGTCCCTGGTTTaGGGCTCAGCCTCTCATTACTGTTATCCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: SANLKRVHLSLV*GSASHYCYPVA Trigger: AGCAACAGGATAACAGTAATGAGAGGCTGAGCCCCAAACCAGGGACAGGTGAACCCGTTTTAAGTTTGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000194869.6 ENSMUST00000195220.2 |
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| CDS CAA 72 bp | TCGGAACCGCTCATTACAAAGTTAGCACCCCAGAAATaGGCTTCTTTTATCATTGTCCGGGAGTTGCGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SEPLITKLAPQK*ASFIIVRELRW Trigger: CCACCGCAACTCCCGGACAATGATAAAAGAAGCCAATTTCTGGGGTGCTAACTTTGTAATGAGCGGTTCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS TCA 72 bp | ACAAGGGCTGTCCTGACTTGGGTTATTCTTCTCTCCTaGGTTAGAATCCAATGGCTCAGCTGGGAAGTTATC | + |
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Preference number: 6 (lower is better) Translates to: TRAVLTWVILLS*VRIQWLSWEVI Trigger: GATAACTTCCCAGCTGAGCCATTGGATTCTAACTCAGGAGAGAAGAATAACCCAAGTCAGGACAGCCCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS GCA 72 bp | CCCAGAAATTGGCTTCTTTTATCATTGTCCGGGAGTTaGGGTGGCCCTTATAAACCATCTTTACTAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PRNWLLLSLSGS*GGPYKPSLLVA Trigger: GGCCACTAGTAAAGATGGTTTATAAGGGCCACCGCAACTCCCGGACAATGATAAAAGAAGCCAATTTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS CCA 72 bp | AGTGCAAACTTAAAACGGGTTCACCTGTCCCTGGTTTaGGGCTCAGCCTCTCATTACTGTTATCTGACTGAT | + |
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Preference number: 6 (lower is better) Translates to: SANLKRVHLSLV*GSASHYCYLTD Trigger: ATCAGTCAGATAACAGTAATGAGAGGCTGAGCCCCAAACCAGGGACAGGTGAACCCGTTTTAAGTTTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027856.13 |
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| CDS GCA 72 bp | AGAATCCAATGGCTCAGCTGGGAAGTTATCAAGTTGTaGTGTATCTATCTGGTTTTGAGTGAGGTTTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RIQWLSWEVIKL*CIYLVLSEVFW Trigger: CCAGAAAACCTCACTCAAAACCAGATAGATACAGCACAACTTGATAACTTCCCAGCTGAGCCATTGGATTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS CAA 72 bp | GTTAGAATCCAATGGCTCAGCTGGGAAGTTATCAAGTaGTGCTGTATCTATCTGGTTTTGAGTGAGGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VRIQWLSWEVIK*CCIYLVLSEVF Trigger: GAAAACCTCACTCAAAACCAGATAGATACAGCACAACTTGATAACTTCCCAGCTGAGCCATTGGATTCTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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| CDS TCA 72 bp | GGGAAGTTATCAAGTTGTGCTGTATCTATCTGGTTTTaGGTGAGGTTTTCTGGAAGTGTTCCTTTCTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GKLSSCAVSIWF*VRFSGSVPFSD Trigger: ATCAGAGAAAGGAACACTTCCAGAAAACCTCACTCAAAACCAGATAGATACAGCACAACTTGATAACTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027856.13 ENSMUST00000194869.6 |
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