Pregenerated sensors for CYP2A22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091867Ensembl transcript IDs: ENSMUST00000170227.3
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAGCTGTTGTTACGCTCTCCCTCCCTCTTaGTCCACCTTGGCTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: DSFAEASDPFWMSDSCCYALPPS*STLAQP Trigger: GGGTTGAGCCAAGGTGGATCAAGAGGGAGGGAGAGC...GTAACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| 3UTR-3UTR CAA 90 bp | TTTCTTCCATGCACGTGGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCACTCCGGCTCTCCCTCCCTCTaGATCCACCTTGGCTCAACC | + |
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Preference number: 3 (lower is better) Translates to: FLPCTWSLLNPFIFSLHSGSPSL*IHLGST Trigger: GGTTGAGCCAAGGTGGATCAAGAGGGAGGGAGAGCC...GGAGTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| 3UTR CCA 72 bp | GGATGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTaGATGAGTGACAGCTGTTGTTACTGCTGCCCACTA | + |
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Preference number: 3 (lower is better) Translates to: GWDSFAEASDPF*MSDSCCYCCPL Trigger: TAGTGGGCAGCAGTAACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| 3UTR TCA 72 bp | GCTTGGGAACACACTGCTCTTGTTTCGAGTACTGAATaGGAGAAGGATGGGACAGTTTTGCAGAGGCGAGTG | + |
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Preference number: 3 (lower is better) Translates to: AWEHTALVSSTE*EKDGTVLQRRV Trigger: CACTCGCCTCTGCAAAACTGTCCCATCCTTCTCTCATTCAGTACTCGAAACAAGAGCAGTGTGTTCCCAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| 3UTR CCA 72 bp | ACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTaGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: TKVSSLLFLPCT*SLLNPFIFSLH Trigger: GTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| 3UTR GCA 72 bp | AATTTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATaGACGTGGTCCCTTCTTAACCCCTTCATCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: NFTKVSSLLFLP*TWSLLNPFIFS Trigger: AGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| 3UTR GCA 72 bp | GACCCTTTCTGGATGAGTGACAGCTGTTGTTACTGCTaGCCACTAGGTGTTTCTTTCTTTTTATTATTACTG | + |
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Preference number: 3 (lower is better) Translates to: DPFWMSDSCCYC*PLGVSFFLLLL Trigger: CAGTAATAATAAAAAGAAAGAAACACCTAGTGGGCAGCAGTAACAACAGCTGTCACTCATCCAGAAAGGGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CCA 90 bp | TGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAGCTGTTGTACATGGTGGGGTCAATaGGGGCTCCACAAGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: WDSFAEASDPFWMSDSCCTWWGQ*GLHKCP Trigger: AGGGCACTTGTGGAGCCCCCATTGACCCCACCATGT...ACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CCA 90 bp | TTTCTTCCATGCACGTGGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCACTCCTGCTCAGGTACATGGTaGGGTCAATGGGGGCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: FLPCTWSLLNPFIFSLHSCSGTW*GQWGLH Trigger: GTGGAGCCCCCATTGACCCCACCATGTACCTGAGCA...GGAGTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR TCA 90 bp | TGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAGCTGTTGTCTTTGTCCTCGTAGTTaGAGCGGTCCCCGAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: WDSFAEASDPFWMSDSCCLCPRS*SGPRRQ Trigger: TTGTCTTCGGGGACCGCTTCAACTACGAGGACAAAG...ACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR GCA 90 bp | TTTCTTCCATGCACGTGGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCACTCCCCCCTGATTTTCTGCTaGCAGACAGACACCAAGACC | + |
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Preference number: 4 (lower is better) Translates to: FLPCTWSLLNPFIFSLHSPLIFC*QTDTKT Trigger: GGTCTTGGTGTCTGTCTGGCAGCAGAAAATCAGGGG...GGAGTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CCA 90 bp | TTTCTTCCATGCACGTGGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCACTCCCGGTCAATCTCCTCATaGACCTTGGCCTCCACATCT | + |
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Preference number: 4 (lower is better) Translates to: FLPCTWSLLNPFIFSLHSRSISS*TLASTS Trigger: AGATGTGGAGGCCAAGGTCCATGAGGAGATTGACCG...GGAGTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR TCA 90 bp | GACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAGCTGTTGTTACTCTGCAAGATGGTGGTaGAGAACAGGAACAGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: DSFAEASDPFWMSDSCCYSARWW*RTGTAA Trigger: TGCAGCTGTTCCTGTTCTTCACCACCATCTTGCAGA...GTAACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGATGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACCATTGGAGACTGTTTTaGTCAGGTACATGGTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: REGWDSFAEASDPFWMSDHWRLF*SGTWWG Trigger: ACCCCACCATGTACCTGAGCAAAACAGTCTCCAATG...GTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCATCCTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGATGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAAGAACAGGAACAGCTaGATCTTACCCAGGCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: REGWDSFAEASDPFWMSDKNRNS*ILPRLY Trigger: ATACAGCCTGGGTAAGATGCAGCTGTTCCTGTTCTT...GTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCATCCTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR TCA 90 bp | TTTCTTCCATGCACGTGGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCACTCCCCTCCAAAGCCTCTTTaGCTGCATCGTATCCATATA | + |
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Preference number: 4 (lower is better) Translates to: FLPCTWSLLNPFIFSLHSPPKPL*LHRIHI Trigger: TATATGGATACGATGCAGTCAAAGAGGCTTTGGAGG...GGAGTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR GCA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACCTTGATCAAACAGCCTaGCTCCTCCTGGATGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNLDQTA*LLLDAL Trigger: GAGCGCATCCAGGAGGAGGCAGGCTGTTTGATCAAG...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CCA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACGTCAATGAAGCCTCGTaGGGAATTGGGGTCCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNVNEAS*GIGVQG Trigger: ACCCTGGACCCCAATTCCCCACGAGGCTTCATTGAC...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR TCA 90 bp | TTTCTTCCATGCACGTGGTCCCTTCTTAACCCCTTCATCTTCTCTCTCCACTCCGCAAATTGGTTCATTTaGCTCATCATCTGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: FLPCTWSLLNPFIFSLHSANWFI*LIICSS Trigger: ACTGCTGCAGATGATGAGTCAAATGAACCAATTTGC...GGAGTGGAGAGAGAAGATGAAGGGGTTAAGAAGGGACCACGTGCATGGAAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR TCA 90 bp | AATTTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTGAGCTGACCTGTGGGTaGAGCAGCAAATTGGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: NFTKVSSLLFLPCTWSLLELTCG*SSKLVH Trigger: ATGAACCAATTTGCTGCTTCACCCACAGGTCAGCTC...AAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CCA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACAGGATCGCTTCCCAATaGAAAAGGGCAGAAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNRIASQ*KRAEKQ Trigger: CTGCTTTTCTGCCCTTTTCCATTGGGAAGCGATCCT...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR GCA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACTTGTCATCCAGGAAGTaGTGTGGGTTGAAGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNLSSRK*CGLKSL Trigger: CAAAGACTTCAACCCACAGCACTTCCTGGATGACAA...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR TCA 90 bp | AATTTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTGTTTGGGGGACTCATTaGTATCTTCTAGTTTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: NFTKVSSLLFLPCTWSLLVWGTH*YLLVSL Trigger: CAAGGAAACTAGAAGATATCAATGAGTCCCCCAAAC...AAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CCA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACAAGTTAGAAAATCTCTaGATCTCATGGATCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNKLENL*ISWITA Trigger: GGCTGTGATCCATGAGATCCAGAGATTTTCTAACTT...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR GCA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACAAATTTTTCTCCTTTTaGATGTGGATGAGAAAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNKFFSF*MWMRKE Trigger: CTCCTTTCTCATCCACATGCAAAAGGAGAAAAATTT...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS GCA 90 bp | TTGCTCAGGTACATGGTGGGGTCAATGGGGGCTCCACAAGTGCCCTaGAACATCTTGATCAAACAGCCTGCCTCCTCCTGGATGCGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LLRYMVGSMGAPQVP*NILIKQPASSWMRS Trigger: GGAGCGCATCCAGGAGGAGGCAGGCTGTTTGATCAAGATGTTGCAGGGCACTTGTGGAGCCCCCATTGACCCCACCATGTACCTGAGCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | GACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAGCTGTTGTTACAAGCCTCGTGGGGAATaGGGGTCCAGGGTACTGTGG | + |
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Preference number: 5 (lower is better) Translates to: DSFAEASDPFWMSDSCCYKPRGE*GSRVLW Trigger: CCACAGTACCCTGGACCCCAATTCCCCACGAGGCTT...GTAACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS CCA 90 bp | GCTGCATCTTACCCAGGCTGTATCCCAAACAGGATCGCTTCCCAATaGAAAAGGGCAGAAAAGCAGGGATCTTCTTCAACTGTCCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: AASYPGCIPNRIASQ*KRAEKQGSSSTVPC Trigger: ACAAGGGACAGTTGAAGAAGATCCCTGCTTTTCTGCCCTTTTCCATTGGGAAGCGATCCTGTTTGGGATACAGCCTGGGTAAGATGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | TGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACAGCTGTTGTGTAAACCCCTCTGGTTaGGGGGACTCATTGATATCT | + |
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Preference number: 5 (lower is better) Translates to: WDSFAEASDPFWMSDSCCVNPSG*GDSLIS Trigger: AGATATCAATGAGTCCCCCAAACCAGAGGGGTTTAC...ACAACAGCTGTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | AGAGAAGGATGGGACAGTTTTGCAGAGGCGAGTGACCCTTTCTGGATGAGTGACTGTGGGTTGAAGTCTTaGGGGCTAGAGAAGAACTTT | + |
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Preference number: 5 (lower is better) Translates to: REGWDSFAEASDPFWMSDCGLKS*GLEKNF Trigger: AAAGTTCTTCTCTAGCCCCAAAGACTTCAACCCACA...GTCACTCATCCAGAAAGGGTCACTCGCCTCTGCAAAACTGTCCCATCCTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | TTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACATCTCCTCATGGACCTaGGCCTCCACATCTGGATGC | + |
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Preference number: 5 (lower is better) Translates to: FTKVSSLLFLPCTWSLLNISSWT*ASTSGC Trigger: GCATCCAGATGTGGAGGCCAAGGTCCATGAGGAGAT...GTTAAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | AATTTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTAACACATCAGTGCCCTaGGGGAGGAAGAAGCCACGG | + |
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Preference number: 5 (lower is better) Translates to: NFTKVSSLLFLPCTWSLLNTSVP*GRKKPR Trigger: CCGTGGCTTCTTCCTCCCCAAGGGCACTGATGTGTT...AAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | TTCTGGATGAGTGACAGCTGTTGTTACTGCTGCCCACTAGGTGTTTCTTTCTTTTCCTCCAAAGCCTCTTaGACTGCATCGTATCCATAT | + |
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Preference number: 5 (lower is better) Translates to: FWMSDSCCYCCPLGVSFFSSKAS*TASYPY Trigger: ATATGGATACGATGCAGTCAAAGAGGCTTTGGAGGA...AAAGAAAGAAACACCTAGTGGGCAGCAGTAACAACAGCTGTCACTCATCCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS-3UTR CAA 90 bp | AATTTTACCAAGGTGAGTAGTCTTCTATTTCTTCCATGCACGTGGTCCCTTCTTATGGAGCTAATGACATaGGAGACTGTTTTGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: NFTKVSSLLFLPCTWSLLMELMT*ETVLLR Trigger: CCTGAGCAAAACAGTCTCCAATGTCATTAGCTCCAT...AAGAAGGGACCACGTGCATGGAAGAAATAGAAGACTACTCACCTTGGTAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS CCA 72 bp | TACCCAGGCTGTATCCCAAACAGGATCGCTTCCCAATaGAAAAGGGCAGAAAAGCAGGGATCTTCTTCAACT | + |
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Preference number: 6 (lower is better) Translates to: YPGCIPNRIASQ*KRAEKQGSSST Trigger: AGTTGAAGAAGATCCCTGCTTTTCTGCCCTTTTCCATTGGGAAGCGATCCTGTTTGGGATACAGCCTGGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS GCA 72 bp | TCAATCTCCTCATGGACCTTGGCCTCCACATCTGGATaGTTCATTAGTAGCAGGAAGCCATATCGTAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: SISSWTLASTSG*FISSRKPYRSK Trigger: CTTACTACGATATGGCTTCCTGCTACTAATGAAGCATCCAGATGTGGAGGCCAAGGTCCATGAGGAGATTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS TCA 72 bp | TGCTTCACTTTCTGTATCATGAAGTCTTCCAGTTTATaGGAATCCTTGATGATCTGTTGCTGTGGTCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: CFTFCIMKSSSL*ESLMICCCGPG Trigger: GCCCGGACCACAGCAACAGATCATCAAGGATTCTCATAAACTGGAAGACTTCATGATACAGAAAGTGAAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS CAA 72 bp | GTGTACTTTGGTATGATCCTGGTAAACCCCTCTGGTTaGGGGGACTCATTGATATCTTCTAGTTTCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: VYFGMILVNPSG*GDSLISSSFLG Trigger: TCCAAGGAAACTAGAAGATATCAATGAGTCCCCCAAACCAGAGGGGTTTACCAGGATCATACCAAAGTACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS TCA 72 bp | ATACATCTTTTCTATTCAGTTGCAGGTAATTTCCAATaGAAGGCAAAGGAATGGGTCCTGGGGGCAACTTCC | + |
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Preference number: 6 (lower is better) Translates to: IHLFYSVAGNFQ*KAKEWVLGATS Trigger: GGAAGTTGCCCCCAGGACCCATTCCTTTGCCTTTCATTGGAAATTACCTGCAACTGAATAGAAAAGATGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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| CDS CAA 72 bp | ATGATCCTGGTAAACCCCTCTGGTTTGGGGGACTCATaGATATCTTCTAGTTTCCTTGGAAATTTGAATCGG | + |
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Preference number: 6 (lower is better) Translates to: MILVNPSGLGDS*ISSSFLGNLNR Trigger: CCGATTCAAATTTCCAAGGAAACTAGAAGATATCAATGAGTCCCCCAAACCAGAGGGGTTTACCAGGATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170227.3 |
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