Pregenerated sensors for CYB5B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031924Ensembl transcript IDs: ENSMUST00000034400.5
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGCAGACTGGTTTACTGTGCAGTTTCCTGTCCTGTCAAGCCCCTaGCAAGCTGGAAGGGAGGCAGGAGGACACTTCCCAACATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RADWFTVQFPVLSSP*QAGREAGGHFPTSL Trigger: CAGAGATGTTGGGAAGTGTCCTCCTGCCTCCCTTCCAGCTTGCCAGGGGCTTGACAGGACAGGAAACTGCACAGTAAACCAGTCTGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR TCA 90 bp | GAAAAGACAAGCCAAATAACCGAAAGGAGCGTCTGCCCAAGCAGCTaGTTAGACGAGGCAGGCGTGGGCAAGGAGTGGCCCCTGCCATTC | + |
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Preference number: 1 (lower is better) Translates to: EKTSQITERSVCPSS*LDEAGVGKEWPLPF Trigger: GAATGGCAGGGGCCACTCCTTGCCCACGCCTGCCTCGTCTAATCAGCTGCTTGGGCAGACGCTCCTTTCGGTTATTTGGCTTGTCTTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR TCA 90 bp | GAAGGAGTGGGAACCAATGAGAGAAACCCTGGCAAGGACACAGAGTaGGCAGGTGCTTTGGGCGTCAGGCTCTGGCGGATGAAAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: EGVGTNERNPGKDTE*AGALGVRLWRMKDS Trigger: AGAGTCTTTCATCCGCCAGAGCCTGACGCCCAAAGCACCTGCTCACTCTGTGTCCTTGCCAGGGTTTCTCTCATTGGTTCCCACTCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR GCA 90 bp | GCACTTAATGAGCACAAACCCTACACCGTGAGCCCCGATGGCAACTaGTGGAAGAGCCAGCCAGCTCAAGTGACAGCTCTGGACAGACTT | + |
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Preference number: 1 (lower is better) Translates to: ALNEHKPYTVSPDGN*WKSQPAQVTALDRL Trigger: AAGTCTGTCCAGAGCTGTCACTTGAGCTGGCTGGCTCTTCCAGCAGTTGCCATCGGGGCTCACGGTGTAGGGTTTGTGCTCATTAAGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR TCA 90 bp | ACTCAATGTTCCTTTGTTCTTCCCTTCTACCCAGCATACTCCATGTaGCTTCGCTATCCCAGCATGCAGGTCCCGGGCTCCCTGCACACA | + |
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Preference number: 1 (lower is better) Translates to: TQCSFVLPFYPAYSM*LRYPSMQVPGSLHT Trigger: TGTGTGCAGGGAGCCCGGGACCTGCATGCTGGGATAGCGAAGTCACATGGAGTATGCTGGGTAGAAGGGAAGAACAAAGGAACATTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CCA 90 bp | GCTTCTTCAGCCTCCCTCCTAGACCACTCCCACAAATCCCAAAGCTaGCCAAATGTGACGGAGCTCCCCGTTACTTTTGGGATATTTGGC | + |
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Preference number: 1 (lower is better) Translates to: ASSASLLDHSHKSQS*PNVTELPVTFGIFG Trigger: GCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTTGGCCAGCTTTGGGATTTGTGGGAGTGGTCTAGGAGGGAGGCTGAAGAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR GCA 90 bp | GTGAGTGCAGTGACTCAGACACAGGTCATCAGGCTTCGCGGCAATTaGTTTTATCCACTGAGCCATCTTGCTGGCCCCTTACTTCTAACA | + |
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Preference number: 1 (lower is better) Translates to: VSAVTQTQVIRLRGN*FYPLSHLAGPLLLT Trigger: TGTTAGAAGTAAGGGGCCAGCAAGATGGCTCAGTGGATAAAAGCAATTGCCGCGAAGCCTGATGACCTGTGTCTGAGTCACTGCACTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR GCA 90 bp | CTAGGTGTCCCATCAAGTTTGGAGTTAGCTGGGACGCTCCTGTCCTaGACTCAATGTTCCTTTGTTCTTCCCTTCTACCCAGCATACTCC | + |
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Preference number: 1 (lower is better) Translates to: LGVPSSLELAGTLLS*TQCSFVLPFYPAYS Trigger: GGAGTATGCTGGGTAGAAGGGAAGAACAAAGGAACATTGAGTGCAGGACAGGAGCGTCCCAGCTAACTCCAAACTTGATGGGACACCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CCA 90 bp | GGGTGTGTGTGTGTGCGTGTGTGTGCAAAGACCATAGCACACATGTaGAAGTCAGAGGACAACTTTTGGGAATCGGTTCTTTCTATCCTG | + |
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Preference number: 1 (lower is better) Translates to: GCVCVRVCAKTIAHM*KSEDNFWESVLSIL Trigger: CAGGATAGAAAGAACCGATTCCCAAAAGTTGTCCTCTGACTTCCACATGTGTGCTATGGTCTTTGCACACACACGCACACACACACACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR TCA 90 bp | CCAAATGTGACGGAGCTCCCCGTTACTTTTGGGATATTTGGCAACTaGATCTCACAGCTTCAACCCTTCGGTTTCTCGTTGAGACAAGAC | + |
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Preference number: 1 (lower is better) Translates to: PNVTELPVTFGIFGN*ISQLQPFGFSLRQD Trigger: GTCTTGTCTCAACGAGAAACCGAAGGGTTGAAGCTGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CCA 90 bp | CAAATCCCAAAGCTGGCCAAATGTGACGGAGCTCCCCGTTACTTTTaGGATATTTGGCAACTGAATCTCACAGCTTCAACCCTTCGGTTT | + |
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Preference number: 1 (lower is better) Translates to: QIPKLAKCDGAPRYF*DIWQLNLTASTLRF Trigger: AAACCGAAGGGTTGAAGCTGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTTGGCCAGCTTTGGGATTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR GCA 90 bp | TGTCCAGGCTTCTTTGACAAGTTTAGACTTTTAAAAGTACACCTGTaGACATGTTGTGTTGCTTTGCCGTTTACGGAAAGCCTTGACAAA | + |
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Preference number: 1 (lower is better) Translates to: CPGFFDKFRLLKVHL*TCCVALPFTESLDK Trigger: TTTGTCAAGGCTTTCCGTAAACGGCAAAGCAACACAACATGTGCACAGGTGTACTTTTAAAAGTCTAAACTTGTCAAAGAAGCCTGGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CCA 90 bp | GGCTGGGTAGAAACTTTTAGAGAATGGGTGTTAACACATTTTATCTaGGTAGCACAAATCTCTCATGTTCACCTGCCATTACCTGTATAT | + |
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Preference number: 1 (lower is better) Translates to: GWVETFREWVLTHFI*VAQISHVHLPLPVY Trigger: ATATACAGGTAATGGCAGGTGAACATGAGAGATTTGTGCTACCCAGATAAAATGTGTTAACACCCATTCTCTAAAAGTTTCTACCCAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGCACTGCCACAGGGAGAGAGAATACAGTCAGAGGTGCCAGGAAAATGCCTGAGTGAGCAGGTGCTTTaGGCGTCAGGCTCTGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: QALPQGERIQSEVPGKCLSEQVL*ASGSGG Trigger: TCCGCCAGAGCCTGACGCCCAAAGCACCTGCTCACT...CAGGCATTTTCCTGGCACCTCTGACTGTATTCTCTCTCCCTGTGGCAGTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR TCA 90 bp | CCAGACTGGCCTCAACTCAGAGATTCTGCAGCCTCTGTCTCTCCTACATCGGGACATGGTCTCCCAATCTaGAGGGGCATGCCGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: PDWPQLRDSAASVSPTSGHGLPI*RGMPDN Trigger: ATTGTCCGGCATGCCCCTTCAGATTGGGAGACCATG...TCCCGATGTAGGAGAGACAGAGGCTGCAGAATCTCTGAGTTGAGGCCAGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | GCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGGTCACAGAGTGAGCAGGTaGTTTGGGCGTCAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: AIAFCTSLSDENQLPGLGHRVSR*FGRQAL Trigger: CAGAGCCTGACGCCCAAAGCACCTGCTCACTCTGTG...ACCCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | CCAGACTGGCCTCAACTCAGAGATTCTGCAGCCTCTGTCTCTCCTACATCGGGAGAATACAGTCAGAGGTaGCAGGAAAATGCCTGGACC | + |
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Preference number: 2 (lower is better) Translates to: PDWPQLRDSAASVSPTSGEYSQR*QENAWT Trigger: GGTCCAGGCATTTTCCTGGCACCTCTGACTGTATTC...TCCCGATGTAGGAGAGACAGAGGCTGCAGAATCTCTGAGTTGAGGCCAGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR TCA 90 bp | CTGGATGTGACACCAGCCCAGAAGCTGACTGGTAATGAACAAAGATGTGAAGAAGCAGAAAGGCCTTTGTaGAGCCCCACGGACCGGAGA | + |
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Preference number: 2 (lower is better) Translates to: LDVTPAQKLTGNEQRCEEAERPL*SPTDRR Trigger: TCTCCGGTCCGTGGGGCTTCACAAAGGCCTTTCTGC...TTCTTCACATCTTTGTTCATTACCAGTCAGCTTCTGGGCTGGTGTCACATCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CAA 90 bp | TGTGAGTGCAGTGACTCAGACACAGGTCATCAGGCTTCGCGGCAATaGCTTTTATCCACTGAGCCATCTTGCTGGCCCCTTACTTCTAAC | + |
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Preference number: 2 (lower is better) Translates to: CECSDSDTGHQASRQ*LLSTEPSCWPLTSN Trigger: GTTAGAAGTAAGGGGCCAGCAAGATGGCTCAGTGGATAAAAGCAATTGCCGCGAAGCCTGATGACCTGTGTCTGAGTCACTGCACTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | GCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGGTTGGTGTGCACCACCATaGCCAGCCGAAAATGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: AIAFCTSLSDENQLPGLGWCAPP*PAENAV Trigger: AACTGCATTTTCGGCTGGGCATGGTGGTGCACACCA...ACCCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGCACTGCCACAGGGAGAGAGAATACAGTCAGAGGTGCCAGGAAAATGCCTGTCTGGTCAACCATCTTaGCTCCAAGGGGAAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: QALPQGERIQSEVPGKCLSGQPS*LQGERK Trigger: TTTTCTTTCCCCTTGGAGCCAAGATGGTTGACCAGA...CAGGCATTTTCCTGGCACCTCTGACTGTATTCTCTCTCCCTGTGGCAGTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | GTGCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGAGGCTTCGCGGCAATTaGTTTTATCCACTGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VLLLSVHHSVMKTSSQGWRLRGN*FYPLSH Trigger: ATGGCTCAGTGGATAAAAGCAATTGCCGCGAAGCCT...CCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | GCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGGTTCAACTCAGAGATTCTaGAGCCTCTGTCTCTCCTAC | + |
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Preference number: 2 (lower is better) Translates to: AIAFCTSLSDENQLPGLGSTQRF*SLCLSY Trigger: GTAGGAGAGACAGAGGCTGCAGAATCTCTGAGTTGA...ACCCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | GAAGTATTTTGGGAAAAGAGGCGGGACTTAGAGACAGGAGGAGCCATCAGCTACTTTCTATCCTGTGAGTaGAGTGACTCAGACACAGGT | + |
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Preference number: 2 (lower is better) Translates to: EVFWEKRRDLETGGAISYFLSCE*SDSDTG Trigger: ACCTGTGTCTGAGTCACTGCACTCACAGGATAGAAA...GTAGCTGATGGCTCCTCCTGTCTCTAAGTCCCGCCTCTTTTCCCAAAATACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCCATTACCTGTATATGTGGCAGCAGCTGGTCACCTCAAGAATAAACAACAACATCTCTGGTCCTaGTGGAATCCCATGGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: HLPLPVYVAAAGHLKNKQQHLWS*WNPMVS Trigger: GGAAACCATGGGATTCCAGCAGGACCAGAGATGTTG...TTGTTTATTCTTGAGGTGACCAGCTGCTGCCACATATACAGGTAATGGCAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CAA 90 bp | GTGTGCAAAGACCATAGCACACATGTGGAAGTCAGAGGACAACTTTaGGGAATCGGTTCTTTCTATCCTGTGAGTGCAGTGACTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: VCKDHSTHVEVRGQL*GIGSFYPVSAVTQT Trigger: TGTCTGAGTCACTGCACTCACAGGATAGAAAGAACCGATTCCCAAAAGTTGTCCTCTGACTTCCACATGTGTGCTATGGTCTTTGCACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | TTACCTGTATATGTGGCAGCAGCTGGTCACCTCAAGAATAAACAATCAAACCTGGGTACTGTCAGGCACTaGCACAGGGAGAGAGAATAC | + |
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Preference number: 2 (lower is better) Translates to: LPVYVAAAGHLKNKQSNLGTVRH*HREREY Trigger: GTATTCTCTCTCCCTGTGGCAGTGCCTGACAGTACC...CAGGTTTGATTGTTTATTCTTGAGGTGACCAGCTGCTGCCACATATACAGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | TTACCTGTATATGTGGCAGCAGCTGGTCACCTCAAGAATAAACAATCAAACCTGCCACAGGTCAGGAGGTaGTGTCAGTGGATAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: LPVYVAAAGHLKNKQSNLPQVRR*CQWIGT Trigger: AGTTCCTATCCACTGACAGCACCTCCTGACCTGTGG...CAGGTTTGATTGTTTATTCTTGAGGTGACCAGCTGCTGCCACATATACAGGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGGTACCATAGCACACATGTaGAAGTCAGAGGACAACTTT | + |
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Preference number: 2 (lower is better) Translates to: AIAFCTSLSDENQLPGLGTIAHM*KSEDNF Trigger: AAAGTTGTCCTCTGACTTCCACATGTGTGCTATGGT...ACCCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | GTGCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGCTTTGTGAAGTATTTTaGGAAAAGAGGCGGGACTTA | + |
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Preference number: 2 (lower is better) Translates to: VLLLSVHHSVMKTSSQGWLCEVF*EKRRDL Trigger: TAAGTCCCGCCTCTTTTCCCAAAATACTTCACAAAG...CCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CAA 90 bp | TACACCTGTGCACATGTTGTGTTGCTTTGCCGTTTACGGAAAGCCTaGACAAACGATCACCTAAAACCTACCTTTCCCCTAGCTGTTTAT | + |
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Preference number: 2 (lower is better) Translates to: YTCAHVVLLCRLRKA*TNDHLKPTFPLAVY Trigger: ATAAACAGCTAGGGGAAAGGTAGGTTTTAGGTGATCGTTTGTCAAGGCTTTCCGTAAACGGCAAAGCAACACAACATGTGCACAGGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | TTTTATCTGGGTAGCACAAATCTCTCATGTTCACCTGCCATTACCTGTATATGTGAGGTGCCAGGAAAATaGCTGGACCAACGAGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: FYLGSTNLSCSPAITCICEVPGK*LDQREK Trigger: CTTCTCTCGTTGGTCCAGGCATTTTCCTGGCACCTC...ACATATACAGGTAATGGCAGGTGAACATGAGAGATTTGTGCTACCCAGATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | CATGCCCAGCCGAAAATGCAGTTCTTTAACATTTCCTACAAGCCAGATGTTTTTGGGACGCTCCTGTCCTaGACTCAATGTTCCTTTGTT | + |
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Preference number: 2 (lower is better) Translates to: HAQPKMQFFNISYKPDVFGTLLS*TQCSFV Trigger: AACAAAGGAACATTGAGTGCAGGACAGGAGCGTCCC...AAAAACATCTGGCTTGTAGGAAATGTTAAAGAACTGCATTTTCGGCTGGGCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | AAATGTGACGGAGCTCCCCGTTACTTTTGGGATATTTGGCAACTGAATCTCACATCAGTGGATAGGAACTaGCTCCTCTTGGTCTTAATG | + |
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Preference number: 2 (lower is better) Translates to: KCDGAPRYFWDIWQLNLTSVDRN*LLLVLM Trigger: CATTAAGACCAAGAGGAGGCAGTTCCTATCCACTGA...TGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | GCTATTGCTTTCTGTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTGGGTTACAGTTCTTTTATTTaGTGGAGTGGTTGTGACATG | + |
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Preference number: 2 (lower is better) Translates to: AIAFCTSLSDENQLPGLGYSSFI*WSGCDM Trigger: CATGTCACAACCACTCCACCAAATAAAAGAACTGTA...ACCCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTATCTGGGTAGCACAAATCTCTCATGTTCACCTGCCATTACCTGTATATGTAGGAGGTGCTGTCAGTaGATAGGAACTGCCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: FYLGSTNLSCSPAITCICRRCCQ*IGTASS Trigger: AGAGGAGGCAGTTCCTATCCACTGACAGCACCTCCT...ACATATACAGGTAATGGCAGGTGAACATGAGAGATTTGTGCTACCCAGATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR TCA 90 bp | TTTTATCTGGGTAGCACAAATCTCTCATGTTCACCTGCCATTACCTGTATATGTAGAAGCCCTGGGTATTaGCGGATTTCATGGATCGCA | + |
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Preference number: 2 (lower is better) Translates to: FYLGSTNLSCSPAITCICRSPGY*RISWIA Trigger: TGCGATCCATGAAATCCGTCAATACCCAGGGCTTCT...ACATATACAGGTAATGGCAGGTGAACATGAGAGATTTGTGCTACCCAGATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | GCAACAGGATTACAACAAGTAGACCTGAACAGAATCTCATTATGTAGCTTTGGCCTATGTGGACCAGACTaGCCTCAACTCAGAGATTCT | + |
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Preference number: 2 (lower is better) Translates to: ATGLQQVDLNRISLCSFGLCGPD*PQLRDS Trigger: AGAATCTCTGAGTTGAGGCCAGTCTGGTCCACATAG...GCCAAAGCTACATAATGAGATTCTGTTCAGGTCTACTTGTTGTAATCCTGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | CATGCCCAGCCGAAAATGCAGTTCTTTAACATTTCCTACAAGCCAGATGTTTTTAGGAGGATAGATATCTaGTCAACCATCTTGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HAQPKMQFFNISYKPDVFRRIDI*STILAP Trigger: TGGAGCCAAGATGGTTGACCAGATATCTATCCTCCT...AAAAACATCTGGCTTGTAGGAAATGTTAAAGAACTGCATTTTCGGCTGGGCATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | TTTTATCTGGGTAGCACAAATCTCTCATGTTCACCTGCCATTACCTGTATATGTTGCCAGGAAAATGCCTaGACCAACGAGAGAAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: FYLGSTNLSCSPAITCICCQENA*TNERRN Trigger: ATTCCTTCTCTCGTTGGTCCAGGCATTTTCCTGGCA...ACATATACAGGTAATGGCAGGTGAACATGAGAGATTTGTGCTACCCAGATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCCCAGCCGAAAATGCAGTTCTTTAACATTTCCTACAAGCCAGATGTTTTTCATCAACTTTTGAAATaGAAGGAAGGAGTGGGAACC | + |
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Preference number: 2 (lower is better) Translates to: HAQPKMQFFNISYKPDVFHQLLK*KEGVGT Trigger: GGTTCCCACTCCTTCCTTTCATTTCAAAAGTTGATG...AAAAACATCTGGCTTGTAGGAAATGTTAAAGAACTGCATTTTCGGCTGGGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR TCA 90 bp | CATGCCCAGCCGAAAATGCAGTTCTTTAACATTTCCTACAAGCCAGATGTTTTTGGGATGCACACTTTGTaGAGTATTTTGGGAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: HAQPKMQFFNISYKPDVFGMHTL*SILGKE Trigger: CTCTTTTCCCAAAATACTTCACAAAGTGTGCATCCC...AAAAACATCTGGCTTGTAGGAAATGTTAAAGAACTGCATTTTCGGCTGGGCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR CCA 90 bp | AAATGTGACGGAGCTCCCCGTTACTTTTGGGATATTTGGCAACTGAATCTCACATCAGCTATAAGAAGCTaGGAAAGACACAAATGTGAA | + |
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Preference number: 2 (lower is better) Translates to: KCDGAPRYFWDIWQLNLTSAIRS*ERHKCE Trigger: TTCACATTTGTGTCTTTCCCAGCTTCTTATAGCTGA...TGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGGATTACAACAAGTAGACCTGAACAGAATCTCATTATGTAGCTTTGGCATTGGCATCAACTTTTaGAATGAAAGGAAGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: ATGLQQVDLNRISLCSFGIGINF*NERKEW Trigger: CCACTCCTTCCTTTCATTTCAAAAGTTGATGCCAAT...GCCAAAGCTACATAATGAGATTCTGTTCAGGTCTACTTGTTGTAATCCTGTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTAGAGAATGGGTGTTAACACATTTTATCTGGGTAGCACAAATCTCTCATGTGTGTGCGTGTGTGTaGAAAGACCATAGCACACAT | + |
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Preference number: 2 (lower is better) Translates to: TFREWVLTHFIWVAQISHVCACV*KDHSTH Trigger: ATGTGTGCTATGGTCTTTGCACACACACGCACACAC...ATGAGAGATTTGTGCTACCCAGATAAAATGTGTTAACACCCATTCTCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| 3UTR CAA 90 bp | AAGTTCAAACTTGAGTCTTGTACTTTAAGACAAGGAATCAGAAATTaGCTAATCGGTAAAGAAAAACAGCAGAAAGGCCTTTGTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: KFKLESCTLRQGIRN*LIGKEKQQKGLCEA Trigger: GGCTTCACAAAGGCCTTTCTGCTGTTTTTCTTTACCGATTAGCAAATTTCTGATTCCTTGTCTTAAAGTACAAGACTCAAGTTTGAACTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTTAGAGAATGGGTGTTAACACATTTTATCTGGGTAGCACAAATCTCTCATGCAAAGACAAAAGTATaGAAATCTTTTCCTTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: TFREWVLTHFIWVAQISHAKTKV*KSFPSG Trigger: GCCAGAAGGAAAAGATTTTCATACTTTTGTCTTTGC...ATGAGAGATTTGTGCTACCCAGATAAAATGTGTTAACACCCATTCTCTAAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | CATGCAGGTCCCGGGCTCCCTGCACACAACCTTCCCTaGCTTTACCTGGAGATGCGCGCCGCATGCCGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: HAGPGLPAHNLP*LYLEMRAACRF Trigger: AAAGCGGCATGCGGCGCGCATCTCCAGGTAAAGGCAGGGAAGGTTGTGTGCAGGGAGCCCGGGACCTGCATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | CCGGGCTCCCTGCACACAACCTTCCCTGCCTTTACCTaGAGATGCGCGCCGCATGCCGCTTTTGTTACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSLHTTFPAFT*RCAPHAAFVTD Trigger: GTCTGTAACAAAAGCGGCATGCGGCGCGCATCTCCAGGTAAAGGCAGGGAAGGTTGTGTGCAGGGAGCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | GAGCACAAACCCTACACCGTGAGCCCCGATGGCAACTaGTGGAAGAGCCAGCCAGCTCAAGTGACAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EHKPYTVSPDGN*WKSQPAQVTAL Trigger: CAGAGCTGTCACTTGAGCTGGCTGGCTCTTCCAGCAGTTGCCATCGGGGCTCACGGTGTAGGGTTTGTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | CACAAACCCTACACCGTGAGCCCCGATGGCAACTGCTaGAAGAGCCAGCCAGCTCAAGTGACAGCTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HKPYTVSPDGNC*KSQPAQVTALD Trigger: GTCCAGAGCTGTCACTTGAGCTGGCTGGCTCTTCCAGCAGTTGCCATCGGGGCTCACGGTGTAGGGTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | GGAACCAATGAGAGAAACCCTGGCAAGGACACAGAGTaGGCAGGTGCTTTGGGCGTCAGGCTCTGGCGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GTNERNPGKDTE*AGALGVRLWRM Trigger: CATCCGCCAGAGCCTGACGCCCAAAGCACCTGCTCACTCTGTGTCCTTGCCAGGGTTTCTCTCATTGGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | TGCCATCAGCACTTAATGAGCACAAACCCTACACCGTaGGCCCCGATGGCAACTGCTGGAAGAGCCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CHQHLMSTNPTP*APMATAGRASQ Trigger: CTGGCTGGCTCTTCCAGCAGTTGCCATCGGGGCTCACGGTGTAGGGTTTGTGCTCATTAAGTGCTGATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | CTGGAAGGGAGGCAGGAGGACACTTCCCAACATCTCTaGTCCTGCTGGAATCCCATGGTTTCCTGCTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: LEGRQEDTSQHL*SCWNPMVSCWM Trigger: CATCCAGCAGGAAACCATGGGATTCCAGCAGGACCAGAGATGTTGGGAAGTGTCCTCCTGCCTCCCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | TGTGCAGTTTCCTGTCCTGTCAAGCCCCTGGCAAGCTaGAAGGGAGGCAGGAGGACACTTCCCAACATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CAVSCPVKPLAS*KGGRRTLPNIS Trigger: AGAGATGTTGGGAAGTGTCCTCCTGCCTCCCTTCCAGCTTGCCAGGGGCTTGACAGGACAGGAAACTGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | GCCTCCCTCCTAGACCACTCCCACAAATCCCAAAGCTaGCCAAATGTGACGGAGCTCCCCGTTACTTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLLDHSHKSQS*PNVTELPVTFG Trigger: CCCAAAAGTAACGGGGAGCTCCGTCACATTTGGCCAGCTTTGGGATTTGTGGGAGTGGTCTAGGAGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | TCCTTTGTTCTTCCCTTCTACCCAGCATACTCCATGTaGCTTCGCTATCCCAGCATGCAGGTCCCGGGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: SFVLPFYPAYSM*LRYPSMQVPGS Trigger: GGAGCCCGGGACCTGCATGCTGGGATAGCGAAGTCACATGGAGTATGCTGGGTAGAAGGGAAGAACAAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | CAGCAGCTGGTCACCTCAAGAATAAACAATCAAACCTaGCCACGCCCACAGGTCAGGAGGTGCTGTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: QQLVTSRINNQT*PRPQVRRCCQW Trigger: CCACTGACAGCACCTCCTGACCTGTGGGCGTGGGCAGGTTTGATTGTTTATTCTTGAGGTGACCAGCTGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | CTTTGGCTGGCTTGGAGCTTGCTCTGTAGACCAGGCTaGCCTACAACCCAAGAGAACTGTCTGCTTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWLAWSLLCRPG*PTTQENCLLLP Trigger: AGGCAGAAGCAGACAGTTCTCTTGGGTTGTAGGTCAGCCTGGTCTACAGAGCAAGCTCCAAGCCAGCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCACTGCCACAGGGAGAGAGAATACAGTCAGAGGTGCCAGGAAAATGCCTGGTCAGAGGACAACTTTaGGGAATCGGTTCTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: QALPQGERIQSEVPGKCLVRGQL*GIGSFY Trigger: ATAGAAAGAACCGATTCCCAAAAGTTGTCCTCTGAC...CAGGCATTTTCCTGGCACCTCTGACTGTATTCTCTCTCCCTGTGGCAGTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | ACTGAATCTCACAGCTTCAACCCTTCGGTTTCTCGTTaGGACAAGACATGTCTGAGTCCACTTCCCTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TESHSFNPSVSR*DKTCLSPLPLG Trigger: CCCCAAGGGAAGTGGACTCAGACATGTCTTGTCTCAACGAGAAACCGAAGGGTTGAAGCTGTGAGATTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | ATAGAAACTAAGAAACAGCTGGGTACTGTCAGGCACTaGCACAGGGAGAGAGAATACAGTCAGAGGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: IETKKQLGTVRH*HREREYSQRCQ Trigger: CTGGCACCTCTGACTGTATTCTCTCTCCCTGTGGCAGTGCCTGACAGTACCCAGCTGTTTCTTAGTTTCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | CCATCAAGTTTGGAGTTAGCTGGGACGCTCCTGTCCTaGACTCAATGTTCCTTTGTTCTTCCCTTCTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: PSSLELAGTLLS*TQCSFVLPFYP Trigger: TGGGTAGAAGGGAAGAACAAAGGAACATTGAGTGCAGGACAGGAGCGTCCCAGCTAACTCCAAACTTGATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | ACTATGTGGACCAGACTGGCCTCAACTCAGAGATTCTaGAGCCTCTGTCTCTCCTACATCGGGATTAATGGT | + |
|
Preference number: 3 (lower is better) Translates to: TMWTRLASTQRF*SLCLSYIGING Trigger: ACCATTAATCCCGATGTAGGAGAGACAGAGGCTGCAGAATCTCTGAGTTGAGGCCAGTCTGGTCCACATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | ACGGAGCTCCCCGTTACTTTTGGGATATTTGGCAACTaGATCTCACAGCTTCAACCCTTCGGTTTCTCGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TELPVTFGIFGN*ISQLQPFGFSL Trigger: CAACGAGAAACCGAAGGGTTGAAGCTGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | GTAGACCAGGCTGACCTACAACCCAAGAGAACTGTCTaGTTCTGCCTCCCAAGTGCTGGGATTAAAGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: VDQADLQPKRTV*FCLPSAGIKDL Trigger: TAAATCTTTAATCCCAGCACTTGGGAGGCAGAAGCAGACAGTTCTCTTGGGTTGTAGGTCAGCCTGGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | AGAATCTCATTATGTAGCTTTGGCTGGCTTGGAGCTTaGTCTGTAGACCAGGCTGACCTACAACCCAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RISLCSFGWLGA*SVDQADLQPKR Trigger: TCTCTTGGGTTGTAGGTCAGCCTGGTCTACAGAGCAAGCTCCAAGCCAGCCAAAGCTACATAATGAGATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | GTAGACCTGAACAGAATCTCATTATGTAGCTTTGGCTaGCTTGGAGCTTGCTCTGTAGACCAGGCTGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: VDLNRISLCSFG*LGACSVDQADL Trigger: TAGGTCAGCCTGGTCTACAGAGCAAGCTCCAAGCCAGCCAAAGCTACATAATGAGATTCTGTTCAGGTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | AAGCTGGCCAAATGTGACGGAGCTCCCCGTTACTTTTaGGATATTTGGCAACTGAATCTCACAGCTTCAACC | + |
|
Preference number: 3 (lower is better) Translates to: KLAKCDGAPRYF*DIWQLNLTAST Trigger: GGTTGAAGCTGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTTGGCCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAAATCTCTCATGTTCACCTGCCATTACCTGTATATGTGGCAGCAGCTGGTCAGCACTCAATGTTCCTTaGTTCTTCCCTTCTACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TNLSCSPAITCICGSSWSALNVP*FFPSTQ Trigger: CTGGGTAGAAGGGAAGAACAAAGGAACATTGAGTGC...TGACCAGCTGCTGCCACATATACAGGTAATGGCAGGTGAACATGAGAGATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | TCAACTTTTGAAATGAAAGGAAGGAGTGGGAACCAATaGGAGAAACCCTGGCAAGGACACAGAGTGAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: STFEMKGRSGNQ*EKPWQGHRVSR Trigger: CCTGCTCACTCTGTGTCCTTGCCAGGGTTTCTCTCATTGGTTCCCACTCCTTCCTTTCATTTCAAAAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | AAACCAAAAGTTGGCGCCATGGAGGTAAAACCCAGATaGAAACCGAAGTCTCTTGGCATGGTCTCCCAATCT | + |
|
Preference number: 3 (lower is better) Translates to: KPKVGAMEVKPR*KPKSLGMVSQS Trigger: AGATTGGGAGACCATGCCAAGAGACTTCGGTTTTCATCTGGGTTTTACCTCCATGGCGCCAACTTTTGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | AAAATAACATCTGGGGTGTGTGTGTGTGCGTGTGTGTaGAAAGACCATAGCACACATGTGGAAGTCAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KITSGVCVCACV*KDHSTHVEVRG Trigger: TCCTCTGACTTCCACATGTGTGCTATGGTCTTTGCACACACACGCACACACACACACCCCAGATGTTATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | TGTGTGCGTGTGTGTGCAAAGACCATAGCACACATGTaGAAGTCAGAGGACAACTTTTGGGAATCGGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: CVRVCAKTIAHM*KSEDNFWESVL Trigger: AAGAACCGATTCCCAAAAGTTGTCCTCTGACTTCCACATGTGTGCTATGGTCTTTGCACACACACGCACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR GCA 72 bp | ATGACACACCTTGCTTGTAAATCACTTTCCACTGCTTaGCATCAGCACTTAATGAGCACAAACCCTACACCG | + |
|
Preference number: 3 (lower is better) Translates to: MTHLACKSLSTA*HQHLMSTNPTP Trigger: CGGTGTAGGGTTTGTGCTCATTAAGTGCTGATGGCAAGCAGTGGAAAGTGATTTACAAGCAAGGTGTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | AAGAAATCAAAGGGATGCACACTTTGTGAAGTATTTTaGGAAAAGAGGCGGGACTTAGAGACAGGAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KKSKGCTLCEVF*EKRRDLETGGA Trigger: GGCTCCTCCTGTCTCTAAGTCCCGCCTCTTTTCCCAAAATACTTCACAAAGTGTGCATCCCTTTGATTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | AAATGTGACGGAGCTCCCCGTTACTTTTGGGATATTTaGCAACTGAATCTCACAGCTTCAACCCTTCGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KCDGAPRYFWDI*QLNLTASTLRF Trigger: AAACCGAAGGGTTGAAGCTGTGAGATTCAGTTGCCAAATATCCCAAAAGTAACGGGGAGCTCCGTCACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | GTACATCACTCAGTGATGAAAACCAGCTCCCAGGGCTaGGTAGAAACTTTTAGAGAATGGGTGTTAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: VHHSVMKTSSQG*VETFREWVLTH Trigger: ATGTGTTAACACCCATTCTCTAAAAGTTTCTACCCAGCCCTGGGAGCTGGTTTTCATCACTGAGTGATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR TCA 72 bp | GCATGGTCTCCCAATCTGAAGGGGCATGCCGGACAATaGCATTTACATCTAAGTTATTTTACTGAGATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: AWSPNLKGHAGQ*HLHLSYFTEIN Trigger: GTTTATCTCAGTAAAATAACTTAGATGTAAATGTCATTGTCCGGCATGCCCCTTCAGATTGGGAGACCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | AAATCTCTCATGTTCACCTGCCATTACCTGTATATGTaGCAGCAGCTGGTCACCTCAAGAATAAACAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: KSLMFTCHYLYM*QQLVTSRINNQ Trigger: TTGATTGTTTATTCTTGAGGTGACCAGCTGCTGCCACATATACAGGTAATGGCAGGTGAACATGAGAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTAGAGAATGGGTGTTAACACATTTTATCTGGGTAGCACAAATCTCTCATATCTGGTCAACCATCTaGGCTCCAAGGGGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TFREWVLTHFIWVAQISHIWSTI*APRGKK Trigger: TTTCTTTCCCCTTGGAGCCAAGATGGTTGACCAGAT...ATGAGAGATTTGTGCTACCCAGATAAAATGTGTTAACACCCATTCTCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTTAGAGAATGGGTGTTAACACATTTTATCTGGGTAGCACAAATCTCTCATACACCTGTGCACATGTaGTGTTGCTTTGCCGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: TFREWVLTHFIWVAQISHTPVHM*CCFAVY Trigger: GTAAACGGCAAAGCAACACAACATGTGCACAGGTGT...ATGAGAGATTTGTGCTACCCAGATAAAATGTGTTAACACCCATTCTCTAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CCA 72 bp | GAAACTTTTAGAGAATGGGTGTTAACACATTTTATCTaGGTAGCACAAATCTCTCATGTTCACCTGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: ETFREWVLTHFI*VAQISHVHLPL Trigger: TAATGGCAGGTGAACATGAGAGATTTGTGCTACCCAGATAAAATGTGTTAACACCCATTCTCTAAAAGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS-3UTR GCA 90 bp | GTTCCAAGGAGGGAACACCCTGCAGCCTCCACACAAGTCTCCTCCTCTCATCGCTTCAAAGCTTTCAGTTaGATCAGCACCCGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPRREHPAASTQVSSSHRFKAFS*ISTRLF Trigger: GAACAAGCGGGTGCTGATGCAACTGAAAGCTTTGAA...GCGATGAGAGGAGGAGACTTGTGTGGAGGCTGCAGGGTGTTCCCTCCTTGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | AGTGACTCAGACACAGGTCATCAGGCTTCGCGGCAATaGCTTTTATCCACTGAGCCATCTTGCTGGCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDSDTGHQASRQ*LLSTEPSCWPL Trigger: AAGGGGCCAGCAAGATGGCTCAGTGGATAAAAGCAATTGCCGCGAAGCCTGATGACCTGTGTCTGAGTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | TCCCTTGGGGTAGGAGGCAATGAACATTTACGATCCTaGCTTCAGTCATCTCAGGTCGACTTCAGCCGGACG | + |
|
Preference number: 4 (lower is better) Translates to: SLGVGGNEHLRS*LQSSQVDFSRT Trigger: CGTCCGGCTGAAGTCGACCTGAGATGACTGAAGCAAGGATCGTAAATGTTCATTGCCTCCTACCCCAAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | CAAGCCAGATGTTTTTCACTAGGTGTCCCATCAAGTTaGGAGTTAGCTGGGACGCTCCTGTCCTGCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QARCFSLGVPSS*ELAGTLLSCTQ Trigger: TTGAGTGCAGGACAGGAGCGTCCCAGCTAACTCCAAACTTGATGGGACACCTAGTGAAAAACATCTGGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS-3UTR CCA 90 bp | CACCTGCCATTACCTGTATATGTGGCAGCAGCTGGTCACCTCAAGAATAAACAACTGGCATCAGGGGAGTaGCCGACATCTTCAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HLPLPVYVAAAGHLKNKQLASGE*PTSSKL Trigger: AAGCTTTGAAGATGTCGGCCACTCCCCTGATGCCAG...TTGTTTATTCTTGAGGTGACCAGCTGCTGCCACATATACAGGTAATGGCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS-3UTR TCA 90 bp | CTTTGTGAAGTATTTTGGGAAAAGAGGCGGGACTTAGAGACAGGAGGAGCCATCCTGTCAGCCCAGAAGTaGCGATACAAGAAACCTATA | + |
|
Preference number: 4 (lower is better) Translates to: LCEVFWEKRRDLETGGAILSAQK*RYKKPI Trigger: TATAGGTTTCTTGTATCGTCACTTCTGGGCTGACAG...GATGGCTCCTCCTGTCTCTAAGTCCCGCCTCTTTTCCCAAAATACTTCACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | GACCATAGCACACATGTGGAAGTCAGAGGACAACTTTaGGGAATCGGTTCTTTCTATCCTGTGAGTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DHSTHVEVRGQL*GIGSFYPVSAV Trigger: CACTGCACTCACAGGATAGAAAGAACCGATTCCCAAAAGTTGTCCTCTGACTTCCACATGTGTGCTATGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS-3UTR CCA 90 bp | ACAAATCTCTCATGTTCACCTGCCATTACCTGTATATGTGGCAGCAGCTGGTCAGGCATGAATTGTTCTTaGAAGGATCCTTGTCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: TNLSCSPAITCICGSSWSGMNCS*KDPCHR Trigger: GCGATGACAAGGATCCTTCCAAGAACAATTCATGCC...TGACCAGCTGCTGCCACATATACAGGTAATGGCAGGTGAACATGAGAGATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | GCACATGTTGTGTTGCTTTGCCGTTTACGGAAAGCCTaGACAAACGATCACCTAAAACCTACCTTTCCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AHVVLLCRLRKA*TNDHLKPTFPL Trigger: TAGGGGAAAGGTAGGTTTTAGGTGATCGTTTGTCAAGGCTTTCCGTAAACGGCAAAGCAACACAACATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS-3UTR CCA 90 bp | CTGGATGTGACACCAGCCCAGAAGCTGACTGGTAATGAACAAAGATGTGAAGAATACGCCCAGGAACTTTaGCATGAATTGTTCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDVTPAQKLTGNEQRCEEYAQEL*HELFLE Trigger: TTCCAAGAACAATTCATGCCAAAGTTCCTGGGCGTA...TTCTTCACATCTTTGTTCATTACCAGTCAGCTTCTGGGCTGGTGTCACATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | AAGGCCATGTCACTACAACATAGGAACTCTAAGTCATaGGCATCAACTTTTGAAATGAAAGGAAGGAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAMSLQHRNSKS*ASTFEMKGRSG Trigger: CCCACTCCTTCCTTTCATTTCAAAAGTTGATGCCAATGACTTAGAGTTCCTATGTTGTAGTGACATGGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| 3UTR CAA 72 bp | TGTCTCTGCTTAAGTAAGTCCATACACTGTGTGCTATaGCTTTCTGTACATCACTCAGTGATGAAAACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CLCLSKSIHCVL*LSVHHSVMKTS Trigger: GCTGGTTTTCATCACTGAGTGATGTACAGAAAGCAATAGCACACAGTGTATGGACTTACTTAAGCAGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS-3UTR CAA 90 bp | CCACGCCCACAGGTCAGGAGGTGCTGTCAGTGGATAGGAACTGCCTCCTCTTGGGAACTTTGGCATGAATaGTTCTTGGAAGGATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PRPQVRRCCQWIGTASSWELWHE*FLEGSL Trigger: CAAGGATCCTTCCAAGAACAATTCATGCCAAAGTTC...CCAAGAGGAGGCAGTTCCTATCCACTGACAGCACCTCCTGACCTGTGGGCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
||
| CDS CAA 72 bp | GGGACAAACCAATACGCCCAGGAACTTTGGCATGAATaGTTCTTGGAAGGATCCTTGTCATCGCCTTTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GTNQYAQELWHE*FLEGSLSSPLG Trigger: ACCTAAAGGCGATGACAAGGATCCTTCCAAGAACAATTCATGCCAAAGTTCCTGGGCGTATTGGTTTGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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| CDS CAA 72 bp | CAGGAACTTTGGCATGAATTGTTCTTGGAAGGATCCTaGTCATCGCCTTTAGGTTTAAGGTCACTCGGATGG | + |
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Preference number: 6 (lower is better) Translates to: QELWHELFLEGS*SSPLGLRSLGW Trigger: CCATCCGAGTGACCTTAAACCTAAAGGCGATGACAAGGATCCTTCCAAGAACAATTCATGCCAAAGTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034400.5 |
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