Pregenerated sensors for CYB5A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024646Ensembl transcript IDs: ENSMUST00000160180.9, ENSMUST00000163083.2, ENSMUST00000236742.2
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGAGCTACAGCCAGGGCTaGGATGGCTGGGATCACCCA | + |
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Preference number: 2 (lower is better) Translates to: KGKQIYYNYVLRGRFLSVSYSQG*DGWDHP Trigger: TGGGTGATCCCAGCCATCTCAGCCCTGGCTGTAGCT...CACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGGGCAGGTGGGAGACATaGAGTGACCAGAGTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GNRYITITFSGGGFCQWKGRWET*SDQSPW Trigger: CCAAGGACTCTGGTCACTTCATGTCTCCCACCTGCC...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGGAACCTTTATCTGACTaGGGAGCAGGCAGGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GNRYITITFSGGGFCQWKEPLSD*GAGRWE Trigger: CTCCCACCTGCCTGCTCCTCAGTCAGATAAAGGTTC...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTGATTGTGGGAGACATGAAGTaGCCAGAGTCCTTGGAGCGT | + |
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Preference number: 2 (lower is better) Translates to: QIYYNYVLRGRFLSVEVIVGDMK*PESLER Trigger: ACGCTCCAAGGACTCTGGTCACTTCATGTCTCCCAC...AATCACTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTTCGGCTTCGGAGAGACAAGTCAATCTTCTGCCATGTAGAGGCGATACAGATGGAGTTCCCCGATaGTGTATGTTTTGGACAGTT | + |
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Preference number: 2 (lower is better) Translates to: SSSASERQVNLLPCRGDTDGVPR*CMFWTV Trigger: AACTGTCCAAAACATACATCATCGGGGAACTCCATC...TGTATCGCCTCTACATGGCAGAAGATTGACTTGTCTCTCCGAAGCCGAAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCTTCGGCTTCGGAGAGACAAGTCAATCTTCTGCCATGTAGAGGCGATACAGTAATCAAGGGTTTCTaGTTCTGGCATAGTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: SSSASERQVNLLPCRGDTVIKGF*FWHSLE Trigger: TTCCAGACTATGCCAGAATCAGAAACCCTTGATTAC...TGTATCGCCTCTACATGGCAGAAGATTGACTTGTCTCTCCGAAGCCGAAGAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR GCA 90 bp | CAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTGATTTTTGGACAGTTCTCGTaGATCCGTAGAGTGCCCGAC | + |
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Preference number: 2 (lower is better) Translates to: QIYYNYVLRGRFLSVEVIFGQFS*IRRVPD Trigger: GTCGGGCACTCTACGGATGCACGAGAACTGTCCAAA...AATCACTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTCCTAGTTCACAAGTTTaGCAACTTGGGACTCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: ERETDILQLRSQGEVSVSPSSQV*QLGTPA Trigger: AGCCGGAGTCCCAAGTTGGCAAACTTGTGAACTAGG...ACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | AAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGCACATTTGAAAAGTTaGAGAGTACAAAGAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: KGKQIYYNYVLRGRFLSVAHLKS*RVQRVP Trigger: AGGGACTCTTTGTACTCTTCAACTTTTCAAATGTGC...CACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 ENSMUST00000236742.2 |
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| 3UTR-3UTR TCA 90 bp | CAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTGATTGCACATTTGAAAAGTTaGAGAGTACAAAGAGTCCCT | + |
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Preference number: 2 (lower is better) Translates to: QIYYNYVLRGRFLSVEVIAHLKS*RVQRVP Trigger: AGGGACTCTTTGTACTCTTCAACTTTTCAAATGTGC...AATCACTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 ENSMUST00000236742.2 |
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| 3UTR GCA 72 bp | TTAGTTCTTCGGCTTCGGAGAGACAAGTCAATCTTCTaGCATGTAGAGGCGATACATCAGAGCTACAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LVLRLRRDKSIF*HVEAIHQSYSQ Trigger: CTGGCTGTAGCTCTGATGTATCGCCTCTACATGGCAGAAGATTGACTTGTCTCTCCGAAGCCGAAGAACTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| 3UTR-3UTR CAA 90 bp | AAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGGCACATTTGAAAAGTaGAAGAGTACAAAGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: KGKQIYYNYVLRGRFLSVGTFEK*KSTKSP Trigger: GGGACTCTTTGTACTCTTCAACTTTTCAAATGTGCC...CACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 ENSMUST00000236742.2 |
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| 3UTR-3UTR CAA 90 bp | CAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTGATTGGCACATTTGAAAAGTaGAAGAGTACAAAGAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: QIYYNYVLRGRFLSVEVIGTFEK*KSTKSP Trigger: GGGACTCTTTGTACTCTTCAACTTTTCAAATGTGCC...AATCACTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 ENSMUST00000236742.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGAACATCACCATGAAGTaGAGTAAAAAGGCACATTTG | + |
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Preference number: 3 (lower is better) Translates to: GNRYITITFSGGGFCQWKNITMK*SKKAHL Trigger: CAAATGTGCCTTTTTACTCAACTTCATGGTGATGTT...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 ENSMUST00000236742.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAACATCACCATGAAGTaGAGTAAAAAGGCACATTTG | + |
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Preference number: 3 (lower is better) Translates to: RETDILQLRSQGEVSVSGNITMK*SKKAHL Trigger: CAAATGTGCCTTTTTACTCAACTTCATGGTGATGTT...TCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 ENSMUST00000236742.2 |
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| CDS-3UTR TCA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGAGCTACAGCCAGGGCTaGGATGGCTGGGATCACCCA | + |
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Preference number: 4 (lower is better) Translates to: GNRYITITFSGGGFCQWKSYSQG*DGWDHP Trigger: TGGGTGATCCCAGCCATCTCAGCCCTGGCTGTAGCT...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 |
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| CDS-3UTR GCA 90 bp | GGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGCAGGATCACCCAGGTaGTCTTGCTGTCTTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GKQIYYNYVLRGRFLSVEAGSPR*SCCLCA Trigger: AGCACAAAGACAGCAAGAGCACCTGGGTGATCCTGC...TTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000236742.2 |
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| CDS-3UTR GCA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTTTGGACAGTTCTCGTaGATCCGTAGAGTGCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: GNRYITITFSGGGFCQWKFGQFS*IRRVPD Trigger: GTCGGGCACTCTACGGATGCACGAGAACTGTCCAAA...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 |
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| CDS-3UTR GCA 90 bp | GAAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGCAGGATCACCCAGGTaGTCTTGCTGTCTTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: ERETDILQLRSQGEVSVSAGSPR*SCCLCA Trigger: AGCACAAAGACAGCAAGAGCACCTGGGTGATCCTGC...ACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000236742.2 |
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| CDS-3UTR TCA 90 bp | AGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAGATGGAGTTCCCCGATaGTGTATGTTTTGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: RETDILQLRSQGEVSVSGDGVPR*CMFWTV Trigger: AACTGTCCAAAACATACATCATCGGGGAACTCCATC...TCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 |
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| CDS-3UTR CCA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGGATCTGTCATCTGGATaGAGTTCCCCGATGATGTAT | + |
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Preference number: 4 (lower is better) Translates to: GNRYITITFSGGGFCQWKDLSSG*SSPMMY Trigger: ATACATCATCGGGGAACTCCATCCAGATGACAGATC...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 |
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| CDS-3UTR TCA 90 bp | CAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTGATTGATGGAGTTCCCCGATaGTGTATGTTTTGGACAGTT | + |
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Preference number: 4 (lower is better) Translates to: QIYYNYVLRGRFLSVEVIDGVPR*CMFWTV Trigger: AACTGTCCAAAACATACATCATCGGGGAACTCCATC...AATCACTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 |
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| CDS-3UTR CCA 90 bp | GAAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGATCTGTCATCTGGATaGAGTTCCCCGATGATGTAT | + |
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Preference number: 4 (lower is better) Translates to: ERETDILQLRSQGEVSVSDLSSG*SSPMMY Trigger: ATACATCATCGGGGAACTCCATCCAGATGACAGATC...ACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000160180.9 ENSMUST00000163083.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGCACTCTCCCAGCAAGTaGGTAGCATTTATTCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KGKQIYYNYVLRGRFLSVHSPSK*VAFIQD Trigger: GTCTTGAATAAATGCTACCCACTTGCTGGGAGAGTG...CACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163083.2 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGCTCTTCGAGAAACTTaGTCAGATCGTACACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: KGKQIYYNYVLRGRFLSVALRET*SDRTPY Trigger: ATAAGGTGTACGATCTGACCAAGTTTCTCGAAGAGC...CACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160180.9 |
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| CDS-3UTR CCA 90 bp | AAAGGGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGCCTCTTCGAGAAACTTaGTCAGATCGTACACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: KGKQIYYNYVLRGRFLSVPLRET*SDRTPY Trigger: ATAAGGTGTACGATCTGACCAAGTTTCTCGAAGAGG...CACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| CDS-3UTR CAA 90 bp | AGTTCTTCGGCTTCGGAGAGACAAGTCAATCTTCTGCCATGTAGAGGCGATACAGCCTCTTCGAGAAACTaGGTCAGATCGTACACCTTA | + |
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Preference number: 5 (lower is better) Translates to: SSSASERQVNLLPCRGDTASSRN*VRSYTL Trigger: TAAGGTGTACGATCTGACCAAGTTTCTCGAAGAGGC...TGTATCGCCTCTACATGGCAGAAGATTGACTTGTCTCTCCGAAGCCGAAGAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236742.2 |
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| CDS-3UTR CAA 90 bp | GGAAACAGATATATTACAATTACGTTCTCAGGGGGAGGTTTCTGTCAGTGGAAGTGCTCTTCGAGAAACTaGGTCAGATCGTACACCTTA | + |
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Preference number: 5 (lower is better) Translates to: GNRYITITFSGGGFCQWKCSSRN*VRSYTL Trigger: TAAGGTGTACGATCTGACCAAGTTTCTCGAAGAGCA...CTTCCACTGACAGAAACCTCCCCCTGAGAACGTAATTGTAATATATCTGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160180.9 |
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