Pregenerated sensors for CYB561D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037190Ensembl transcript IDs: ENSMUST00000041459.9, ENSMUST00000194344.2, ENSMUST00000194967.2, ENSMUST00000195235.6
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCCCTGCCTGCCCATGCCGAGTGGTCAGGTGTGCTTTGCCAAGCTaGTCTTTGTGGAGGATGACAAGACCTAGACCCAGCAGAGCACAG | + |
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Preference number: 1 (lower is better) Translates to: SPACPCRVVRCALPS*SLWRMTRPRPSRAQ Trigger: CTGTGCTCTGCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGGCATGGGCAGGCAGGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR GCA 90 bp | CTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTaGTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGAC | + |
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Preference number: 1 (lower is better) Translates to: LHDFWTYQYKYKLYG*WGDCCNSNFTQTHD Trigger: GTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| 3UTR CCA 90 bp | CATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTaGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCAT | + |
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Preference number: 1 (lower is better) Translates to: HDFWTYQYKYKLYGC*GDCCNSNFTQTHDH Trigger: ATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| 3UTR-3UTR GCA 90 bp | AGCACCCAGTGGCAGCGTGCGCGGACCTTCCGAGAGAGGGACCGCAGCAGGGAAGACATAAGAACGGGGTaGCAGGAGAACAGACCTGGA | + |
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Preference number: 2 (lower is better) Translates to: STQWQRARTFRERDRSREDIRTG*QENRPG Trigger: TCCAGGTCTGTTCTCCTGGCACCCCGTTCTTATGTC...TTCCCTGCTGCGGTCCCTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR-3UTR GCA 90 bp | GCACCCAGTGGCAGCGTGCGCGGACCTTCCGAGAGAGGGACCGCAGCAGGGAACAGAGAACATCAGGAGTaGCTCGGTCATCAGGAAGGA | + |
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Preference number: 2 (lower is better) Translates to: APSGSVRGPSERGTAAGNREHQE*LGHQEG Trigger: TCCTTCCTGATGACCGAGGCACTCCTGATGTTCTCT...GTTCCCTGCTGCGGTCCCTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGAAGTGGCGTGGTAGAGTTTCAGCTTTGCCAGGGGCCATCGGGGCAGCAGGTAGAGCAGCCCCATaGCCCCTGAACACTGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TQKWRGRVSALPGAIGAAGRAAP*PLNTAD Trigger: GTCTGCAGTGTTCAGGGGGCATGGGGCTGCTCTACC...TGCTGCCCCGATGGCCCCTGGCAAAGCTGAAACTCTACCACGCCACTTCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTGTGCTTTGCCAAGCTGCTCTTTGTGGAGGATGACAAGACCTAGACCCAGCCACCCAGTGGCAGCGTaGGCGGACCTTCCGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: RCALPSCSLWRMTRPRPSHPVAA*ADLPRE Trigger: CTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTG...GCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR CAA 90 bp | ACAGCTAACAGCCCTGCCTGCCCATGCCGAGTGGTCAGGTGTGCTTaGCCAAGCTGCTCTTTGTGGAGGATGACAAGACCTAGACCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TANSPACPCRVVRCA*PSCSLWRMTRPRPS Trigger: GCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGGCATGGGCAGGCAGGGCTGTTAGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCCACCAACCCAGAAGTGGCGTGGTAGAGTTTCAGCTTTGCCAGGGGCCATCCCGAGTGGTCAGGTGTaGTTTGCCAAGCTGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SPPTQKWRGRVSALPGAIPSGQV*FAKLLF Trigger: AAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGG...GATGGCCCCTGGCAAAGCTGAAACTCTACCACGCCACTTCTGGGTTGGTGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAGAGGAAGTTTCACAGCAGGCTCTGAGGACTCCCATTCAAGGAGGGGCCCCAAGCTGTATGGCTGCTaGGGAGACTGTTGCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: IRGSFTAGSEDSHSRRGPKLYGC*GDCCNS Trigger: GGAGTTGCAACAGTCTCCCCAGCAGCCATACAGCTT...GGGGCCCCTCCTTGAATGGGAGTCCTCAGAGCCTGCTGTGAAACTTCCTCTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR-3UTR TCA 90 bp | TCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGCCACCACATGCTCCCCTGGGTTaGCAGCAAGAAAAGGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: SYYVALVGLELTEICPPPHAPLG*QQEKGD Trigger: GTCTCCCTTTTCTTGCTGTCAACCCAGGGGAGCATG...TGGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTGTCACTGGCCATAGTCTCCAGACTCTAGCACAATTAGCTGGAAATAGCCTTCACCCAGACACATaGCCATGCTCCCCTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SPVTGHSLQTLAQLAGNSLHPDT*PCSPGL Trigger: CAACCCAGGGGAGCATGGTCATGTGTCTGGGTGAAG...GCTATTTCCAGCTAATTGTGCTAGAGTCTGGAGACTATGGCCAGTGACAGGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR-3UTR TCA 90 bp | ACAGGATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGGGAGACACTCTAGTGTaGGGAGATCTACCCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: TGSYYVALVGLELTEICPGDTLV*GDLPLS Trigger: ACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCC...CGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGATCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR-3UTR TCA 90 bp | ATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGCCACCCCCTCCTTACCCAGCTaGCCATTTTCTTACCATGAT | + |
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Preference number: 2 (lower is better) Translates to: ILLCSLGWLRAHRDLPATPSLPS*PFSYHD Trigger: ATCATGGTAAGAAAATGGTCAGCTGGGTAAGGAGGG...GGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR-3UTR TCA 90 bp | ATCAGAGGAAGTTTCACAGCAGGCTCTGAGGACTCCCATTCAAGGAGGGGCCCCACCATTTTCTTACCATaGTGCATTAGCAAGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: IRGSFTAGSEDSHSRRGPTIFLP*CISKNH Trigger: ATGGTTCTTGCTAATGCATCATGGTAAGAAAATGGT...GGGGCCCCTCCTTGAATGGGAGTCCTCAGAGCCTGCTGTGAAACTTCCTCTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR-3UTR TCA 90 bp | TCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGGAGGGAGACACTCTAGTGTaGGGAGATCTACCCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SMISGHTSTNISCMAAGEGDTLV*GDLPLS Trigger: ACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCC...CTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| 3UTR-3UTR TCA 90 bp | CATAGTCTCCAGACTCTAGCACAATTAGCTGGAAATAGCTGTGCCGTCCACACTCTTTTCTTTCCTCCATaGTTTCTGGACATACCAGTA | + |
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Preference number: 2 (lower is better) Translates to: HSLQTLAQLAGNSCAVHTLFFPP*FLDIPV Trigger: TACTGGTATGTCCAGAAATCATGGAGGAAAGAAAAG...AGTGTGGACGGCACAGCTATTTCCAGCTAATTGTGCTAGAGTCTGGAGACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR CCA 72 bp | ACAGCACAGCTAACAGCCCTGCCTGCCCATGCCGAGTaGTCAGGTGTGCTTTGCCAAGCTGCTCTTTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: TAQLTALPAHAE*SGVLCQAALCG Trigger: TCCACAAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGGCATGGGCAGGCAGGGCTGTTAGCTGTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR TCA 72 bp | ATGCACTGGGATCAGAGGAAGTTTCACAGCAGGCTCTaGGGACTCCCATTCAAGGAGGGGCCCCTCCTTACC | + |
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Preference number: 3 (lower is better) Translates to: MHWDQRKFHSRL*GLPFKEGPLLT Trigger: GGTAAGGAGGGGCCCCTCCTTGAATGGGAGTCCTCAGAGCCTGCTGTGAAACTTCCTCTGATCCCAGTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR GCA 72 bp | TGCCCATGCCGAGTGGTCAGGTGTGCTTTGCCAAGCTaGTCTTTGTGGAGGATGACAAGACCTAGACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: CPCRVVRCALPS*SLWRMTRPRPS Trigger: GCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGGCATGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR CCA 72 bp | CGAGTGGTCAGGTGTGCTTTGCCAAGCTGCTCTTTGTaGAGGATGACAAGACCTAGACCCAGCAGAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: RVVRCALPSCSL*RMTRPRPSRAQ Trigger: CTGTGCTCTGCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCTGACCACTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR TCA 72 bp | GGGAGACTGTTGCAACTCCAACTTCACCCAGACACATaGCCATGCTCCCCTGGGTTGACAGCAAGAAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: GRLLQLQLHPDT*PCSPGLTARKG Trigger: CCCTTTTCTTGCTGTCAACCCAGGGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| 3UTR GCA 72 bp | ATCAGGAAGGAGAAAGCCAGAGACATAAGAACGGGGTaGCAGGAGAACAGACCTGGAATGAGAAGAGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: IRKEKARDIRTG*QENRPGMRRGR Trigger: GCGCCCTCTTCTCATTCCAGGTCTGTTCTCCTGGCACCCCGTTCTTATGTCTCTGGCTTTCTCCTTCCTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| 3UTR-3UTR CAA 90 bp | CATAGTCTCCAGACTCTAGCACAATTAGCTGGAAATAGCTGTGCCGTCCACACTCCATGCTCCCCTGGGTaGACAGCAAGAAAAGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: HSLQTLAQLAGNSCAVHTPCSPG*TARKGR Trigger: TCTCCCTTTTCTTGCTGTCAACCCAGGGGAGCATGG...AGTGTGGACGGCACAGCTATTTCCAGCTAATTGTGCTAGAGTCTGGAGACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR CCA 72 bp | ACAGAACACTTGCTTAGCATTTCAGAGCTCTGGGTTTaGGTCCCAGCACTACATAAGTGGGGCATGGTATGG | + |
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Preference number: 3 (lower is better) Translates to: TEHLLSISELWV*VPALHKWGMVW Trigger: CCATACCATGCCCCACTTATGTAGTGCTGGGACCCAAACCCAGAGCTCTGAAATGCTAAGCAAGTGTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR GCA 72 bp | TATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTaGCCGCCACCACAAATGACCATGGTTCAACTTCTA | + |
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Preference number: 3 (lower is better) Translates to: YVALVGLELTEI*PPPQMTMVQLL Trigger: TAGAAGTTGAACCATGGTCATTTGTGGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR CCA 72 bp | TCAGAGCTCTGGGTTTGGGTCCCAGCACTACATAAGTaGGGCATGGTATGGACATACATGGTACATACATCT | + |
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Preference number: 3 (lower is better) Translates to: SELWVWVPALHK*GMVWTYMVHTS Trigger: AGATGTATGTACCATGTATGTCCATACCATGCCCCACTTATGTAGTGCTGGGACCCAAACCCAGAGCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR TCA 72 bp | GGCCATGTTGTGAGTTCAAAGCCCACCTGGGAGACTTaGAACCTTGTCTCAGAAACAGAAGGCAAATTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GHVVSSKPTWET*NLVSETEGKFL Trigger: GAGAAATTTGCCTTCTGTTTCTGAGACAAGGTTTCAAGTCTCCCAGGTGGGCTTTGAACTCACAACATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| 3UTR GCA 72 bp | TACAAATATAAGCTGTATGGCTGCTGGGGAGACTGTTaGAACTCCAACTTCACCCAGACACATGACCATGCT | + |
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Preference number: 3 (lower is better) Translates to: YKYKLYGCWGDC*NSNFTQTHDHA Trigger: AGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCCATACAGCTTATATTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| 3UTR GCA 72 bp | TTCTGGACATACCAGTACAAATATAAGCTGTATGGCTaGTGGGGAGACTGTTGCAACTCCAACTTCACCCAG | + |
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Preference number: 3 (lower is better) Translates to: FWTYQYKYKLYG*WGDCCNSNFTQ Trigger: CTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| 3UTR CCA 72 bp | TGGACATACCAGTACAAATATAAGCTGTATGGCTGCTaGGGAGACTGTTGCAACTCCAACTTCACCCAGACA | + |
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Preference number: 3 (lower is better) Translates to: WTYQYKYKLYGC*GDCCNSNFTQT Trigger: TGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
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| CDS-3UTR GCA 90 bp | AGCACCCAGTGGCAGCGTGCGCGGACCTTCCGAGAGAGGGACCGCAGCAGGGAACGCCACGAGGTGGGCTaGAGCCCCAGAGGCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: STQWQRARTFRERDRSRERHEVG*SPRGSA Trigger: CGCACTGCCTCTGGGGCTGCAGCCCACCTCGTGGCG...TTCCCTGCTGCGGTCCCTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| CDS-3UTR GCA 90 bp | ATCAGAGGAAGTTTCACAGCAGGCTCTGAGGACTCCCATTCAAGGAGGGGCCCCCGCCACGAGGTGGGCTaGAGCCCCAGAGGCAGTGCG | + |
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Preference number: 4 (lower is better) Translates to: IRGSFTAGSEDSHSRRGPRHEVG*SPRGSA Trigger: CGCACTGCCTCTGGGGCTGCAGCCCACCTCGTGGCG...GGGGCCCCTCCTTGAATGGGAGTCCTCAGAGCCTGCTGTGAAACTTCCTCTGAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| CDS-3UTR GCA 90 bp | GCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCCCTCCCAGTGGCAGCGTaGGCGGACCTTCCGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AGETVATPTSPRHMTMLPLPVAA*ADLPRE Trigger: CTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGAG...GGGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000194344.2 |
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| CDS-3UTR GCA 90 bp | ACAGCCCTGCCTGCCCATGCCGAGTGGTCAGGTGTGCTTTGCCAAGCTGCTCTTCAGCCCCAGAGGCAGTaGGCAGAGCTCGGTAGATAT | + |
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Preference number: 4 (lower is better) Translates to: TALPAHAEWSGVLCQAALQPQRQ*AELGRY Trigger: ATATCTACCGAGCTCTGCGCACTGCCTCTGGGGCTG...AAGAGCAGCTTGGCAAAGCACACCTGACCACTCGGCATGGGCAGGCAGGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| CDS-3UTR GCA 90 bp | GCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCCGGTAGAGCAGCCCCATaGCCCCTGAACACTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: AGETVATPTSPRHMTMLPGRAAP*PLNTAD Trigger: GTCTGCAGTGTTCAGGGGGCATGGGGCTGCTCTACC...GGGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR CCA 90 bp | GGCTGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTAGTAGGGCCAGCAGCTaGAGCACCCAGTGGCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: GCWGDCCNSNFTQTHDHASRASS*STQWQR Trigger: ACGCTGCCACTGGGTGCTCCAGCTGCTGGCCCTACT...AGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR CCA 90 bp | TGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCCTGAGTAGGGCCAGCAGCTaGAGCACCCAGTGGCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: WGDCCNSNFTQTHDHAPLSRASS*STQWQR Trigger: ACGCTGCCACTGGGTGCTCCAGCTGCTGGCCCTACT...CAGGGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR GCA 90 bp | GCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCCCAGCCCCAGAGGCAGTaGGCAGAGCTCGGTAGATAT | + |
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Preference number: 4 (lower is better) Translates to: AGETVATPTSPRHMTMLPQPQRQ*AELGRY Trigger: ATATCTACCGAGCTCTGCGCACTGCCTCTGGGGCTG...GGGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR GCA 90 bp | GCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGAGTGCCCTAGTCACCCAGTGGCAGCGTaGGCGGACCTTCCGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: ARKGRHSSVRRSTPECPSHPVAA*ADLPRE Trigger: CTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTG...ACTAGGGCACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| 3UTR CAA 72 bp | AGCCCTGCCTGCCCATGCCGAGTGGTCAGGTGTGCTTaGCCAAGCTGCTCTTTGTGGAGGATGACAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: SPACPCRVVRCA*PSCSLWRMTRP Trigger: AGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGGCATGGGCAGGCAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
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| CDS-3UTR GCA 90 bp | TGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCCAGCCCCAGAGGCAGTaGGCAGAGCTCGGTAGATAT | + |
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Preference number: 4 (lower is better) Translates to: CWGDCCNSNFTQTHDHAPQPQRQ*AELGRY Trigger: ATATCTACCGAGCTCTGCGCACTGCCTCTGGGGCTG...GGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR GCA 90 bp | ATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGCCACCACAGGAGGCTGGCACTaGCCAGCAGGTAGCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ILLCSLGWLRAHRDLPATTGGWH*PAGSPP Trigger: TGGTGGGCTACCTGCTGGGCAGTGCCAGCCTCCTGT...GGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| CDS-3UTR TCA 90 bp | GGCTGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTGGCAGTGAACCAGAGTaGGAACATGCCCAACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GCWGDCCNSNFTQTHDHAGSEPE*EHAQQE Trigger: CTCCTGTTGGGCATGTTCTCACTCTGGTTCACTGCC...AGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR GCA 90 bp | TGCTCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTGGTAGAGCAGCCCCATaGCCCCTGAACACTGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: CSPGLTARKGRHSSVRRSGRAAP*PLNTAD Trigger: GTCTGCAGTGTTCAGGGGGCATGGGGCTGCTCTACC...AGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR CCA 90 bp | GTCTGTCATCCTAGGCCATGTTGTGAGTTCAAAGCCCACCTGGGAGACTTGAAATGCCCAACAGGAGGCTaGCACTGCCCAGCAGGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VCHPRPCCEFKAHLGDLKCPTGG*HCPAGS Trigger: GCTACCTGCTGGGCAGTGCCAGCCTCCTGTTGGGCA...TTTCAAGTCTCCCAGGTGGGCTTTGAACTCACAACATGGCCTAGGATGACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| CDS-3UTR CCA 90 bp | AGCCCACCAACCCAGAAGTGGCGTGGTAGAGTTTCAGCTTTGCCAGGGGCCATCGAATGGAGCCAGGTCTaGCAAGCACAGCAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPPTQKWRGRVSALPGAIEWSQV*QAQQQR Trigger: TCTTTGTTGCTGTGCTTGCCAGACCTGGCTCCATTC...GATGGCCCCTGGCAAAGCTGAAACTCTACCACGCCACTTCTGGGTTGGTGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000194967.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTGACATAAGAACGGGGTaGCAGGAGAACAGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCWGDCCNSNFTQTHDHADIRTG*QENRLE Trigger: CTCCAGTCTGTTCTCCTGGCACCCCGTTCTTATGTC...AGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TGCTCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTGTAGAGTTTCAGCTTTaGCAGGGGCCATCGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSPGLTARKGRHSSVRRSVEFQL*QGPSGQ Trigger: CTGCCCCGATGGCCCCTGGCAAAGCTGAAACTCTAC...AGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | TGCTCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTGCCAGGAGAACAGACTaGAGCCAGGTCTGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CSPGLTARKGRHSSVRRSARRTD*SQVWQA Trigger: TGCTTGCCAGACCTGGCTCCAGTCTGTTCTCCTGGC...AGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCGCCAGGAGAACAGACTaGAGCCAGGTCTGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGLTARKGRHSSVRRSTARRTD*SQVWQA Trigger: TGCTTGCCAGACCTGGCTCCAGTCTGTTCTCCTGGC...GGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGCCCATGCCGAGTaGTCAGGTGTGCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPGLTARKGRHSSVRRSTPAHAE*SGVLCQ Trigger: TTGGCAAAGCACACCTGACCACTCGGCATGGGCAGG...GGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | GCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGAGTGCCCTAGTCCTGCCCATGCCGAGTaGTCAGGTGTGCTTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ARKGRHSSVRRSTPECPSPAHAE*SGVLCQ Trigger: TTGGCAAAGCACACCTGACCACTCGGCATGGGCAGG...ACTAGGGCACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR TCA 90 bp | GCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGAGTGCCCTAGTGGCAGTGAACCAGAGTaGGAACATGCCCAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARKGRHSSVRRSTPECPSGSEPE*EHAQQE Trigger: CTCCTGTTGGGCATGTTCTCACTCTGGTTCACTGCC...ACTAGGGCACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGCACCCAGTGGCAGCGTaGGCGGACCTTCCGAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSMISGHTSTNISCMAAGHPVAA*ADLPRE Trigger: CTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGTG...CCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGAGTGCCCTAGTACCAGAGTGAGAACATaGCCAACAGGAGGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARKGRHSSVRRSTPECPSTRVRT*PTGGWH Trigger: GTGCCAGCCTCCTGTTGGGCATGTTCTCACTCTGGT...ACTAGGGCACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | ATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGCCACCGACATAAGAACGGGGTaGCAGGAGAACAGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILLCSLGWLRAHRDLPATDIRTG*QENRLE Trigger: CTCCAGTCTGTTCTCCTGGCACCCCGTTCTTATGTC...GGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR GCA 90 bp | TGCTCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTGACATAAGAACGGGGTaGCAGGAGAACAGACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CSPGLTARKGRHSSVRRSDIRTG*QENRLE Trigger: CTCCAGTCTGTTCTCCTGGCACCCCGTTCTTATGTC...AGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCCTGTGTGCTTTGCCAAGCTaGTCTTTGTGGAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: WGDCCNSNFTQTHDHAPLCALPS*SLWRMT Trigger: TGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACA...CAGGGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | GCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGAGTGCCCTAGTCCGAGTGGTCAGGTGTaGTTTGCCAAGCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ARKGRHSSVRRSTPECPSPSGQV*FAKLLF Trigger: AAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGG...ACTAGGGCACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCGAGTGGTCAGGTGTaGTTTGCCAAGCTGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPGLTARKGRHSSVRRSTPSGQV*FAKLLF Trigger: AAAGAGCAGCTTGGCAAAGCACACCTGACCACTCGG...GGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCATGGCTGGATCCTCTTaGGGTACAGGTAGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGLTARKGRHSSVRRSTMAGSS*GTGRHC Trigger: GCAATGCCTACCTGTACCGCAAGAGGATCCAGCCAT...GGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | GGCTGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCAAGCTGCTCTTTGTaGAGGATGACAAGACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GCWGDCCNSNFTQTHDHAPSCSL*RMTRPR Trigger: TCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGG...AGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | CTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGGATGCCCAACAGGAGGCTaGCACTGCCCAGCAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHDFWTYQYKYKLYGCWGCPTGG*HCPAGS Trigger: GCTACCTGCTGGGCAGTGCCAGCCTCCTGTTGGGCA...TCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TCCCCTGGGTTGACAGCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCAGAGAACATCAGGAGTaGCTCGGTCATCAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPGLTARKGRHSSVRRSTREHQE*LGHQEG Trigger: TCCTTCCTGATGACCGAGGCACTCCTGATGTTCTCT...GGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGCTGTCAACCCAGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | CATAGTCTCCAGACTCTAGCACAATTAGCTGGAAATAGCTGTGCCGTCCACACTACCAGAGTGAGAACATaGCCAACAGGAGGCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSLQTLAQLAGNSCAVHTTRVRT*PTGGWH Trigger: GTGCCAGCCTCCTGTTGGGCATGTTCTCACTCTGGT...AGTGTGGACGGCACAGCTATTTCCAGCTAATTGTGCTAGAGTCTGGAGACTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR GCA 90 bp | ACAGGATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGATGGCTGGATCCTCTTaGGGTACAGGTAGGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSYYVALVGLELTEICPMAGSS*GTGRHC Trigger: GCAATGCCTACCTGTACCGCAAGAGGATCCAGCCAT...CGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGATCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGATCGGGGCAGCAACTTaGGGTAGAGCAGCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSMISGHTSTNISCMAAGIGAAT*GRAAPC Trigger: GCATGGGGCTGCTCTACCCCAAGTTGCTGCCCCGAT...CCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | GTCTGTCATCCTAGGCCATGTTGTGAGTTCAAAGCCCACCTGGGAGACTTGAAACCACCAACCCAGAAGTaGCGTGGTAGAGTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCHPRPCCEFKAHLGDLKPPTQK*RGRVSA Trigger: AGCTGAAACTCTACCACGCCACTTCTGGGTTGGTGG...TTTCAAGTCTCCCAGGTGGGCTTTGAACTCACAACATGGCCTAGGATGACAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGATGCCCCCTGAACACTaGAGACCTGCCCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSMISGHTSTNISCMAAGMPPEH*RPAHST Trigger: TGTGCTGTGGGCAGGTCTGCAGTGTTCAGGGGGCAT...CCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | CTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGGAATGCCCCCTGAACACTaGAGACCTGCCCACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LHDFWTYQYKYKLYGCWGMPPEH*RPAHST Trigger: TGTGCTGTGGGCAGGTCTGCAGTGTTCAGGGGGCAT...TCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGGAGGTAGAGTTTCAGCTTTaGCAGGGGCCATCGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SMISGHTSTNISCMAAGEVEFQL*QGPSGQ Trigger: CTGCCCCGATGGCCCCTGGCAAAGCTGAAACTCTAC...CTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTACAGGAGGCTGGCACTaGCCAGCAGGTAGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSMISGHTSTNISCMAATGGWH*PAGSPP Trigger: TGGTGGGCTACCTGCTGGGCAGTGCCAGCCTCCTGT...AGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | CAACTTCTAAGTCCATCTCCTGTCACTGGCCATAGTCTCCAGACTCTAGCACAAAGAGAACATCAGGAGTaGCTCGGTCATCAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSPSPVTGHSLQTLAQREHQE*LGHQEG Trigger: TCCTTCCTGATGACCGAGGCACTCCTGATGTTCTCT...TTGTGCTAGAGTCTGGAGACTATGGCCAGTGACAGGAGATGGACTTAGAAGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTATCGGGGCAGCAACTTaGGGTAGAGCAGCCCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSMISGHTSTNISCMAAIGAAT*GRAAPC Trigger: GCATGGGGCTGCTCTACCCCAAGTTGCTGCCCCGAT...AGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR TCA 90 bp | TCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGGAGGCTCTTTGTGGAGGATaGCAAGACCTAGACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SMISGHTSTNISCMAAGEALCGG*QDLDPA Trigger: TGCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGC...CTCCCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGCCAGGAGAACAGACTaGAGCCAGGTCTGGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSMISGHTSTNISCMAAARRTD*SQVWQA Trigger: TGCTTGCCAGACCTGGCTCCAGTCTGTTCTCCTGGC...AGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS-3UTR CCA 90 bp | CAGAACACTTGCTTAGCATTTCAGAGCTCTGGGTTTGGGTCCCAGCACTACATACCAAGCTGCTCTTTGTaGAGGATGACAAGACCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: QNTCLAFQSSGFGSQHYIPSCSL*RMTRPR Trigger: TCTAGGTCTTGTCATCCTCCACAAAGAGCAGCTTGG...TATGTAGTGCTGGGACCCAAACCCAGAGCTCTGAAATGCTAAGCAAGTGTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR CCA 90 bp | TCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGCCACCAACCCAGAAGTaGCGTGGTAGAGTTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSMISGHTSTNISCMAAGPPTQK*RGRVSA Trigger: AGCTGAAACTCTACCACGCCACTTCTGGGTTGGTGG...CCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGCTCTTTGTGGAGGATaGCAAGACCTAGACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSSMISGHTSTNISCMAAALCGG*QDLDPA Trigger: TGCTGGGTCTAGGTCTTGTCATCCTCCACAAAGAGC...AGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGGGTGTGCTTTGCCAAGCTaGTCTTTGTGGAGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: SSMISGHTSTNISCMAAGCALPS*SLWRMT Trigger: TGTCATCCTCCACAAAGAGCAGCTTGGCAAAGCACA...CCCAGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| 3UTR CAA 72 bp | AGGCCATGTTGTGAGTTCAAAGCCCACCTGGGAGACTaGAAACCTTGTCTCAGAAACAGAAGGCAAATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RPCCEFKAHLGD*KPCLRNRRQIS Trigger: AGAAATTTGCCTTCTGTTTCTGAGACAAGGTTTCAAGTCTCCCAGGTGGGCTTTGAACTCACAACATGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTAGAGAACATCAGGAGTaGCTCGGTCATCAGGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSSMISGHTSTNISCMAAREHQE*LGHQEG Trigger: TCCTTCCTGATGACCGAGGCACTCCTGATGTTCTCT...AGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000041459.9 ENSMUST00000194344.2 ENSMUST00000195235.6 |
||
| CDS GCA 90 bp | GTCAGTTGTGAGAGTCCAACAGGTTCCGAGCTCCCAGTGGCAGCGTaGGCGGACCTTCCGAGAGAGGGACCGCAGCAGGGAACTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSCESPTGSELPVAA*ADLPREGPQQGTLR Trigger: CCTGAGAGTTCCCTGCTGCGGTCCCTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGAGCTCGGAACCTGTTGGACTCTCACAACTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194344.2 |
||
| CDS CCA 90 bp | ACAGGAGGCTGGCACTGCCCAGCAGGTAGCCCACCAACCCAGAAGTaGCGTGGTAGAGTTTCAGCTTTGCCAGGGGCCATCGGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGGWHCPAGSPPTQK*RGRVSALPGAIGAA Trigger: TGCTGCCCCGATGGCCCCTGGCAAAGCTGAAACTCTACCACGCCACTTCTGGGTTGGTGGGCTACCTGCTGGGCAGTGCCAGCCTCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCGTGGTCAGGTGTGCTTaGCCAAGCTGCTCTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWGDCCNSNFTQTHDHAPVVRCA*PSCSLW Trigger: CCACAAAGAGCAGCTTGGCAAAGCACACCTGACCAC...GGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CAA 90 bp | ACAGGATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGGGTAGAGTTTCAGCTTaGCCAGGGGCCATCGGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGSYYVALVGLELTEICPGRVSA*PGAIGA Trigger: TGCCCCGATGGCCCCTGGCAAAGCTGAAACTCTACC...CGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGATCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGGGGAGACTGTTGCAACTCCAACTTCACCCAGACACATGACCATGCTCCCTTGCCAAGCTGCTCTTaGTGGAGGATGACAAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: CWGDCCNSNFTQTHDHAPLPSCS*WRMTRP Trigger: AGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAA...GGGAGCATGGTCATGTGTCTGGGTGAAGTTGGAGTTGCAACAGTCTCCCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
||
| CDS-3UTR CAA 90 bp | GCAAGAAAAGGGAGACACTCTAGTGTGAGGAGATCTACCCCTGAGTGCCCTAGTGTGGTCAGGTGTGCTTaGCCAAGCTGCTCTTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARKGRHSSVRRSTPECPSVVRCA*PSCSLW Trigger: CCACAAAGAGCAGCTTGGCAAAGCACACCTGACCAC...ACTAGGGCACTCAGGGGTAGATCTCCTCACACTAGAGTGTCTCCCTTTTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS-3UTR CAA 90 bp | ACAGGATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGTTGCCAAGCTGCTCTTaGTGGAGGATGACAAGACCT | + |
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Preference number: 5 (lower is better) Translates to: TGSYYVALVGLELTEICPLPSCS*WRMTRP Trigger: AGGTCTTGTCATCCTCCACAAAGAGCAGCTTGGCAA...CGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGATCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| CDS-3UTR CAA 90 bp | ATCTTACTATGTAGCCTTGGTTGGCTTAGAGCTCACAGAGATCTGCCCGCCACCGTAGGCATTGCTCACTaGGTTCATGATTACCAAACT | + |
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Preference number: 5 (lower is better) Translates to: ILLCSLGWLRAHRDLPATVGIAH*VHDYQT Trigger: AGTTTGGTAATCATGAACCAAGTGAGCAATGCCTAC...GGTGGCGGGCAGATCTCTGTGAGCTCTAAGCCAACCAAGGCTACATAGTAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041459.9 |
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| CDS-3UTR CAA 90 bp | CTTTCCTCCATGATTTCTGGACATACCAGTACAAATATAAGCTGTATGGCTGCTGTAGGCATTGCTCACTaGGTTCATGATTACCAAACT | + |
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Preference number: 5 (lower is better) Translates to: LSSMISGHTSTNISCMAAVGIAH*VHDYQT Trigger: AGTTTGGTAATCATGAACCAAGTGAGCAATGCCTAC...AGCAGCCATACAGCTTATATTTGTACTGGTATGTCCAGAAATCATGGAGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS GCA 72 bp | GAGAGTCCAACAGGTTCCGAGCTCCCAGTGGCAGCGTaGGCGGACCTTCCGAGAGAGGGACCGCAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: ESPTGSELPVAA*ADLPREGPQQG Trigger: TCCCTGCTGCGGTCCCTCTCTCGGAAGGTCCGCGCACGCTGCCACTGGGAGCTCGGAACCTGTTGGACTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000194344.2 |
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| CDS CCA 72 bp | TGGCACTGCCCAGCAGGTAGCCCACCAACCCAGAAGTaGCGTGGTAGAGTTTCAGCTTTGCCAGGGGCCATC | + |
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Preference number: 6 (lower is better) Translates to: WHCPAGSPPTQK*RGRVSALPGAI Trigger: GATGGCCCCTGGCAAAGCTGAAACTCTACCACGCCACTTCTGGGTTGGTGGGCTACCTGCTGGGCAGTGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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| CDS CAA 72 bp | CTGGATCCTCTTGCGGTACAGGTAGGCATTGCTCACTaGGTTCATGATTACCAAACTGGTGAGGATGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: LDPLAVQVGIAH*VHDYQTGEDGA Trigger: TGCCCCATCCTCACCAGTTTGGTAATCATGAACCAAGTGAGCAATGCCTACCTGTACCGCAAGAGGATCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041459.9 ENSMUST00000195235.6 |
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