Pregenerated sensors for CYB561D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048796Ensembl transcript IDs: ENSMUST00000065664.7, ENSMUST00000106654.2, ENSMUST00000106655.2
Found 206 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCTGTCAGCACGCCTGCCCGCCCGCCCACCAGCCCCCGCACCACCTaGGAGGAGGCAACACCTCAGGCAGGCTCAGGCTTTCTGGCATCG | + |
Preference number: 1 (lower is better) Translates to: AVSTPARPPTSPRTT*EEATPQAGSGFLAS Trigger: CGATGCCAGAAAGCCTGAGCCTGCCTGAGGTGTTGCCTCCTCCCAGGTGGTGCGGGGGCTGGTGGGCGGGCGGGCAGGCGTGCTGACAGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | CATTCAGCCAGGAGGCATCCGCAGCCGGCAGCCACAGATCCCAGCTaGAGGAAGCGCACCCTGGCACTGAGGACTAATGGCTGTCCAGCT | + |
Preference number: 1 (lower is better) Translates to: HSARRHPQPAATDPS*RKRTLALRTNGCPA Trigger: AGCTGGACAGCCATTAGTCCTCAGTGCCAGGGTGCGCTTCCTCCAGCTGGGATCTGTGGCTGCCGGCTGCGGATGCCTCCTGGCTGAATG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | GGTGCCCCCAGAAGCCAAGGCAAGTACACAGGAGCGCTAGAGGCTTaGGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACA | + |
Preference number: 1 (lower is better) Translates to: GAPRSQGKYTGALEA*GYQLPRPRPSQLST Trigger: TGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCCCAAGCCTCTAGCGCTCCTGTGTACTTGCCTTGGCTTCTGGGGGCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | AGGAGACCACCACTACCTGTACTCTTCCTCTGTGCTCTGCACCGATaGCCTCCAGGCCCACTGGTCAGAGGAAGCGACAGCTGGGTCCTT | + |
Preference number: 1 (lower is better) Translates to: RRPPLPVLFLCALHR*PPGPLVRGSDSWVL Trigger: AAGGACCCAGCTGTCGCTTCCTCTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGAAGAGTACAGGTAGTGGTGGTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | ACCCTGGCACTGAGGACTAATGGCTGTCCAGCTGCTGCCCTAGGATaGAAAGACGGGAGGGAAGAAAGCCCCGCCCCAATCTGGCCTAAC | + |
Preference number: 1 (lower is better) Translates to: TLALRTNGCPAAALG*KDGREESPAPIWPN Trigger: GTTAGGCCAGATTGGGGCGGGGCTTTCTTCCCTCCCGTCTTTCCATCCTAGGGCAGCAGCTGGACAGCCATTAGTCCTCAGTGCCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | CAGATCCCTAAGCAGGAGACCACCACTACCTGTACTCTTCCTCTGTaGTCTGCACCGATGCCCTCCAGGCCCACTGGTCAGAGGAAGCGA | + |
Preference number: 1 (lower is better) Translates to: QIPKQETTTTCTLPL*SAPMPSRPTGQRKR Trigger: TCGCTTCCTCTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGAAGAGTACAGGTAGTGGTGGTCTCCTGCTTAGGGATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | GGCAGCAAGAATCCCGATCCCCTTCTCTCCCACAGTGTCTTCCCATaGTGTTACACTCCAAAGCCCAGGAAGAGGGGGAAGGTGACTGGC | + |
Preference number: 1 (lower is better) Translates to: GSKNPDPLLSHSVFP*CYTPKPRKRGKVTG Trigger: GCCAGTCACCTTCCCCCTCTTCCTGGGCTTTGGAGTGTAACAGCATGGGAAGACACTGTGGGAGAGAAGGGGATCGGGATTCTTGCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR TCA 90 bp | TGCTGTTACACTCCAAAGCCCAGGAAGAGGGGGAAGGTGACTGGCTaGCTCAGCCTGCAAGTGCTTAGAGATCTGGAGCTGAAAGGCCCC | + |
Preference number: 1 (lower is better) Translates to: CCYTPKPRKRGKVTG*LSLQVLRDLELKGP Trigger: GGGGCCTTTCAGCTCCAGATCTCTAAGCACTTGCAGGCTGAGTCAGCCAGTCACCTTCCCCCTCTTCCTGGGCTTTGGAGTGTAACAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | ACACTGAGAGATGGGGCAGGGCAGTGTCATGGGCTGAGGGTGGCCTaGTTTGAAGGGCAAAGCAAGAATAGGCTGGCAACTGATAGCAGC | + |
Preference number: 1 (lower is better) Translates to: TLRDGAGQCHGLRVA*FEGQSKNRLATDSS Trigger: GCTGCTATCAGTTGCCAGCCTATTCTTGCTTTGCCCTTCAAAGCAGGCCACCCTCAGCCCATGACACTGCCCTGCCCCATCTCTCAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | TGCTCCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTTGATTaGCTCTATCTCCGAGGTAGAAAGCTGCGTGGATACCTTCCCTGG | + |
Preference number: 1 (lower is better) Translates to: CSSPYTAGLPPRVFD*LYLRGRKLRGYLPW Trigger: CCAGGGAAGGTATCCACGCAGCTTTCTACCTCGGAGATAGAGCCAATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | CCACGTTCACAGCACACTGGATGGCTTGAGCCGGAGAGAGGGCTTTaGAAAAGCCAAGAACAGTTAGTTCCCCTCTGCACTGCAGGGACC | + |
Preference number: 1 (lower is better) Translates to: PRSQHTGWLEPERGL*KSQEQLVPLCTAGT Trigger: GGTCCCTGCAGTGCAGAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | CTGTACTCTTCCTCTGTGCTCTGCACCGATGCCCTCCAGGCCCACTaGTCAGAGGAAGCGACAGCTGGGTCCTTTCTTCCTGCAGAATAT | + |
Preference number: 1 (lower is better) Translates to: LYSSSVLCTDALQAH*SEEATAGSFLPAEY Trigger: ATATTCTGCAGGAAGAAAGGACCCAGCTGTCGCTTCCTCTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGAAGAGTACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR TCA 90 bp | CCCCCTAGTCCCCATTCCTCTACTGAATCCCACCTGCCTTGCTTCTaGGCCACTGGGAGAAGAGGATCTGAGATAGGCAAGCAGACACCT | + |
Preference number: 1 (lower is better) Translates to: PPSPHSSTESHLPCF*ATGRRGSEIGKQTP Trigger: AGGTGTCTGCTTGCCTATCTCAGATCCTCTTCTCCCAGTGGCTCAGAAGCAAGGCAGGTGGGATTCAGTAGAGGAATGGGGACTAGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | AGAGGATCTGAGATAGGCAAGCAGACACCTTGTCTCTGGAACTGGTaGTCCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTTGAT | + |
Preference number: 1 (lower is better) Translates to: RGSEIGKQTPCLWNW*SSPYTAGLPPRVFD Trigger: ATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGGAGCACCAGTTCCAGAGACAAGGTGTCTGCTTGCCTATCTCAGATCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | AGAAGAGGATCTGAGATAGGCAAGCAGACACCTTGTCTCTGGAACTaGTGCTCCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTT | + |
Preference number: 1 (lower is better) Translates to: RRGSEIGKQTPCLWN*CSSPYTAGLPPRVF Trigger: AAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGGAGCACCAGTTCCAGAGACAAGGTGTCTGCTTGCCTATCTCAGATCCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR TCA 90 bp | TCAGAGGAAGCGACAGCTGGGTCCTTTCTTCCTGCAGAATATAAATaGCTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCAC | + |
Preference number: 1 (lower is better) Translates to: SEEATAGSFLPAEYK*LPFLPGLRIDIRWH Trigger: GTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGTCATTTATATTCTGCAGGAAGAAAGGACCCAGCTGTCGCTTCCTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | GTGACTTCAGTGCCTTTACTACCTTATTGTCCAGGAGACCTCCCCTaGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGG | + |
Preference number: 1 (lower is better) Translates to: VTSVPLLPYCPGDLP*VPSFHSSCVALVSW Trigger: CCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGGAGGTCTCCTGGACAATAAGGTAGTAAAGGCACTGAAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | GAAGGGCAAAGCAAGAATAGGCTGGCAACTGATAGCAGCCTATTGTaGATGGGGCGTCAGCCAGAGGGAAGCAAGAGTTCTCAGATGCAG | + |
Preference number: 1 (lower is better) Translates to: EGQSKNRLATDSSLL*MGRQPEGSKSSQMQ Trigger: CTGCATCTGAGAACTCTTGCTTCCCTCTGGCTGACGCCCCATCCACAATAGGCTGCTATCAGTTGCCAGCCTATTCTTGCTTTGCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | TATTGTCCAGGAGACCTCCCCTGGGTCCCTTCTTTCCACAGTTCGTaGGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACATAATT | + |
Preference number: 1 (lower is better) Translates to: YCPGDLPWVPSFHSS*VALVSWFRNQVDII Trigger: AATTATGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGGAGGTCTCCTGGACAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | CCGGAGAGAGGGCTTTGGAAAAGCCAAGAACAGTTAGTTCCCCTCTaGACTGCAGGGACCTCTGTTCATCAAGCTGTATTTAGAGAGTCA | + |
Preference number: 1 (lower is better) Translates to: PERGLWKSQEQLVPL*TAGTSVHQAVFRES Trigger: TGACTCTCTAAATACAGCTTGATGAACAGAGGTCCCTGCAGTGCAGAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 90 bp | GATTGGCTCTATCTCCGAGGTAGAAAGCTGCGTGGATACCTTCCCTaGTTCAGCAGTCTTCAGTCTTTATTAGGATCTATAGAGAGCCCA | + |
Preference number: 1 (lower is better) Translates to: DWLYLRGRKLRGYLP*FSSLQSLLGSIESP Trigger: TGGGCTCTCTATAGATCCTAATAAAGACTGAAGACTGCTGAACCAGGGAAGGTATCCACGCAGCTTTCTACCTCGGAGATAGAGCCAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 90 bp | ACAGTAGCAGCTAGGGTTTCTGCACATTGTGGCTCAGCCATGAAGTaGAAAAATTCATCTACTTCTGAAGTGGGTCCTGTGAAGATCACC | + |
Preference number: 1 (lower is better) Translates to: TVAARVSAHCGSAMK*KNSSTSEVGPVKIT Trigger: GGTGATCTTCACAGGACCCACTTCAGAAGTAGATGAATTTTTGCACTTCATGGCTGAGCCACAATGTGCAGAAACCCTAGCTGCTACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR TCA 90 bp | TCAGACACCAATGTTAAAGATAAGGGACCTTCAGATGTCAGAAACTaGGGTCCTAAGATATGGAACTTGTCTAAGGTTGATTGTACAGCA | + |
Preference number: 1 (lower is better) Translates to: SDTNVKDKGPSDVRN*GPKIWNLSKVDCTA Trigger: TGCTGTACAATCAACCTTAGACAAGTTCCATATCTTAGGACCTCAGTTTCTGACATCTGAAGGTCCCTTATCTTTAACATTGGTGTCTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CAA 90 bp | GGGTGCCCCCAGAAGCCAAGGCAAGTACACAGGAGCGCTAGAGGCTaGGGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCAC | + |
Preference number: 2 (lower is better) Translates to: GCPQKPRQVHRSARG*GLSATTATAISAEH Trigger: GTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCCCAAGCCTCTAGCGCTCCTGTGTACTTGCCTTGGCTTCTGGGGGCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | ACTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCACAGCCCACGCAAGGGCATCTCCCCCTTTaGGCCCACTGTATCATGCCT | + |
Preference number: 2 (lower is better) Translates to: TPLPPGAANRHQMAQPTQGHLPL*AHCIMP Trigger: AGGCATGATACAGTGGGCTCAAAGGGGGAGATGCCC...TTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTGGCACAGCAGCCAGCTaGCTCAGGGAGGATGCCTGG | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSGTAAS*LREDAW Trigger: CCAGGCATCCTCCCTGAGCCAGCTGGCTGCTGTGCC...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTACAGCCCACGCAAACTaGCGGCTGTCAGCACGCCTG | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSTAHAN*RLSARL Trigger: CAGGCGTGCTGACAGCCGGCAGTTTGCGTGGGCTGT...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTCTCCTCCTGGTGCCCTaGCCCCTACACTACGGTCAG | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSLLLVP*PLHYGQ Trigger: CTGACCGTAGTGTAGGGGGCAGGGCACCAGGAGGAG...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTGCCCTCCAGGCCCACTaGTCAGAGGAAGCGACAGCT | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSALQAH*SEEATA Trigger: AGCTGTCGCTTCCTCTGACCAGTGGGCCTGGAGGGC...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTGCCACAGATCCCAGCTaGAGGAAGCGCACCCTGGCA | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSATDPS*RKRTLA Trigger: TGCCAGGGTGCGCTTCCTCCAGCTGGGATCTGTGGC...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | ACTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCACAGCCCACGCAATACCCAGAGGTAGCCTaGAGGAAGTCCTTAGCTCAG | + |
Preference number: 2 (lower is better) Translates to: TPLPPGAANRHQMAQPTQYPEVA*RKSLAQ Trigger: CTGAGCTAAGGACTTCCTTCAGGCTACCTCTGGGTA...TTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CTGTCCAGCTGCTGCCCTAGGATGGAAAGACGGGAGGGAAGAAAGCCCCGCCCCCCGGAGAGAGGGCTTTaGAAAAGCCAAGAACAGTTA | + |
Preference number: 2 (lower is better) Translates to: LSSCCPRMERREGRKPRPPERGL*KSQEQL Trigger: TAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGG...GGGGCGGGGCTTTCTTCCCTCCCGTCTTTCCATCCTAGGGCAGCAGCTGGACAG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTGGGGACACTGAGAGATaGGGCAGGGCAGTGTCATGG | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSGDTER*GRAVSW Trigger: CCATGACACTGCCCTGCCCCATCTCTCAGTGTCCCC...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGTTGTACAGCACTGCCTaGGAGGTTACGGGCTCTCGA | + |
Preference number: 2 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQLYSTA*EVTGSR Trigger: TCGAGAGCCCGTAACCTCTCAGGCAGTGCTGTACAA...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTCCAGGAGACCTCCCCTaGGTCCCTTCTTTCCACAGT | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSPGDLP*VPSFHS Trigger: ACTGTGGAAAGAAGGGACCCAGGGGAGGTCTCCTGG...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CGTTCACAGCACACTGGATGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAACAGACACCTTGTCTCTaGAACTGGTGCTCCAGCCCC | + |
Preference number: 2 (lower is better) Translates to: RSQHTGWLEPERGLWKSQQTPCL*NWCSSP Trigger: GGGGCTGGAGCACCAGTTCCAGAGACAAGGTGTCTG...TTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTGAGGGGGAAGGTGACTaGCTGACTCAGCCTGCAAGT | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSEGEGD*LTQPAS Trigger: ACTTGCAGGCTGAGTCAGCCAGTCACCTTCCCCCTC...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CAA 90 bp | ACTGGTGCTCCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTaGATTGGCTCTATCTCCGAGGTAGAAAGCTGCGTGGATACCTTC | + |
Preference number: 2 (lower is better) Translates to: TGAPAPILQASLPEC*IGSISEVESCVDTF Trigger: GAAGGTATCCACGCAGCTTTCTACCTCGGAGATAGAGCCAATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGGAGCACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | TGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAAGAACAGTTAGTTCCCCTCCACCTGCCTTGCTTCTaGGCCACTGGGAGAAGAGGA | + |
Preference number: 2 (lower is better) Translates to: WLEPERGLWKSQEQLVPLHLPCF*ATGRRG Trigger: TCCTCTTCTCCCAGTGGCTCAGAAGCAAGGCAGGTG...GAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | ACTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCACAGCCCACGCAACACAGCTTACTAATCTaGCATGTAACCCTCACAACC | + |
Preference number: 2 (lower is better) Translates to: TPLPPGAANRHQMAQPTQHSLLI*HVTLTT Trigger: GGTTGTGAGGGTTACATGTCAGATTAGTAAGCTGTG...TTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTATCGCCTCTGTGCTCTaGGAACAAGCTGCTGAACCT | + |
Preference number: 2 (lower is better) Translates to: GLSATTATAISAEHTVFSIASVL*EQAAEP Trigger: AGGTTCAGCAGCTTGTTCTCAGAGCACAGAGGCGAT...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CAA 90 bp | CTTTGCCAGGCTGATACACCTTCCAGTTCAGGACACACAGGATCTTaGTTCCAGCCACAGACCAGGGCATTGCGGGGGTACAAACTCAGA | + |
Preference number: 2 (lower is better) Translates to: LCQADTPSSSGHTGS*FQPQTRALRGYKLR Trigger: TCTGAGTTTGTACCCCCGCAATGCCCTGGTCTGTGGCTGGAACAAAGATCCTGTGTGTCCTGAACTGGAAGGTGTATCAGCCTGGCAAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | TGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAAGAACAGTTAGTTCCCCTCTCCCCATTCCTCTACTaGATCCCACCTGCCTTGCTT | + |
Preference number: 2 (lower is better) Translates to: WLEPERGLWKSQEQLVPLSPFLY*IPPALL Trigger: AAGCAAGGCAGGTGGGATTCAGTAGAGGAATGGGGA...GAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CTGTCCAGCTGCTGCCCTAGGATGGAAAGACGGGAGGGAAGAAAGCCCCGCCCCTTAAGAATAGTTCCATaGAGCAACATGCCAAGTAAG | + |
Preference number: 2 (lower is better) Translates to: LSSCCPRMERREGRKPRPLRIVP*SNMPSK Trigger: CTTACTTGGCATGTTGCTCCATGGAACTATTCTTAA...GGGGCGGGGCTTTCTTCCCTCCCGTCTTTCCATCCTAGGGCAGCAGCTGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CAA 90 bp | GTTCTCCCAAACCTTCCACTTGTACCCAGTAGGGCATCTCCCCCTTaGAGCCCACTGTATCATGCCTCAACAGTAGCAGCTAGGGTTTCT | + |
Preference number: 2 (lower is better) Translates to: VLPNLPLVPSRASPP*SPLYHASTVAARVS Trigger: AGAAACCCTAGCTGCTACTGTTGAGGCATGATACAGTGGGCTCAAAGGGGGAGATGCCCTACTGGGTACAAGTGGAAGGTTTGGGAGAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGGGCATCTCCCCCTTTaGGCCCACTGTATCATGCCT | + |
Preference number: 2 (lower is better) Translates to: KWMRELHPELPTWSRAKRGHLPL*AHCIMP Trigger: AGGCATGATACAGTGGGCTCAAAGGGGGAGATGCCC...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR-3UTR GCA 90 bp | CTCACAGTTTATTGCCTCTGTAGGAAGCATAAAGGCCAGAGCCGGAGTCGGAGAACATGCCAAGTAAGATaGCCAGGACCACTCTGCCCT | + |
Preference number: 2 (lower is better) Translates to: LTVYCLCRKHKGQSRSRRTCQVR*PGPLCP Trigger: AGGGCAGAGTGGTCCTGGGCATCTTACTTGGCATGT...TCTCCGACTCCGGCTCTGGCCTTTATGCTTCCTACAGAGGCAATAAACTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
||
3UTR-3UTR GCA 90 bp | CGTTCACAGCACACTGGATGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAATTCCATGGAGCAACATaGCAAGTAAGATGCCCAGGA | + |
Preference number: 2 (lower is better) Translates to: RSQHTGWLEPERGLWKSQFHGAT*QVRCPG Trigger: TCCTGGGCATCTTACTTGGCATGTTGCTCCATGGAA...TTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTCCAGGAGACCTCCCCTaGGTCCCTTCTTTCCACAGT | + |
Preference number: 2 (lower is better) Translates to: NEERRWAPFIKVTLVRGSPGDLP*VPSFHS Trigger: ACTGTGGAAAGAAGGGACCCAGGGGAGGTCTCCTGG...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CAA 90 bp | TTTGAAGGGCAAAGCAAGAATAGGCTGGCAACTGATAGCAGCCTATaGTGGATGGGGCGTCAGCCAGAGGGAAGCAAGAGTTCTCAGATG | + |
Preference number: 2 (lower is better) Translates to: FEGQSKNRLATDSSL*WMGRQPEGSKSSQM Trigger: CATCTGAGAACTCTTGCTTCCCTCTGGCTGACGCCCCATCCACAATAGGCTGCTATCAGTTGCCAGCCTATTCTTGCTTTGCCCTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGTTGTACAGCACTGCCTaGGAGGTTACGGGCTCTCGA | + |
Preference number: 2 (lower is better) Translates to: KWMRELHPELPTWSRAKRLYSTA*EVTGSR Trigger: TCGAGAGCCCGTAACCTCTCAGGCAGTGCTGTACAA...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | AGTTCTCAGATGCAGAGCTCCTGTCATTTGTTCACTGCCACCCCAACCCCAATAATCGCCTCTGTGCTCTaGGAACAAGCTGCTGAACCT | + |
Preference number: 2 (lower is better) Translates to: SSQMQSSCHLFTATPTPIIASVL*EQAAEP Trigger: AGGTTCAGCAGCTTGTTCTCAGAGCACAGAGGCGAT...TATTGGGGTTGGGGTGGCAGTGAACAAATGACAGGAGCTCTGCATCTGAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR GCA 90 bp | AGTTCTCAGATGCAGAGCTCCTGTCATTTGTTCACTGCCACCCCAACCCCAATATGTCTCTGGAACTGGTaGTCCAGCCCCTATACTGCA | + |
Preference number: 2 (lower is better) Translates to: SSQMQSSCHLFTATPTPICLWNW*SSPYTA Trigger: TGCAGTATAGGGGCTGGAGCACCAGTTCCAGAGACA...TATTGGGGTTGGGGTGGCAGTGAACAAATGACAGGAGCTCTGCATCTGAGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCGCCCTCCAGGCCCACTaGTCAGAGGAAGCGACAGCT | + |
Preference number: 2 (lower is better) Translates to: LSNALKVESEYSQAWNTIALQAH*SEEATA Trigger: AGCTGTCGCTTCCTCTGACCAGTGGGCCTGGAGGGC...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGGGCATCTCCCCCTTTaGGCCCACTGTATCATGCCT | + |
Preference number: 2 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSGHLPL*AHCIMP Trigger: AGGCATGATACAGTGGGCTCAAAGGGGGAGATGCCC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTTCCCCATTCCTCTACTaGATCCCACCTGCCTTGCTT | + |
Preference number: 2 (lower is better) Translates to: NEERRWAPFIKVTLVRGSSPFLY*IPPALL Trigger: AAGCAAGGCAGGTGGGATTCAGTAGAGGAATGGGGA...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCAGCGCACCCTGGCACTaGGGACTAATGGCTGTCCAG | + |
Preference number: 2 (lower is better) Translates to: LSNALKVESEYSQAWNTISAPWH*GLMAVQ Trigger: CTGGACAGCCATTAGTCCTCAGTGCCAGGGTGCGCT...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGGCTCAGCCATGAAGTaGAAAAATTCATCTACTTCT | + |
Preference number: 2 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQGSAMK*KNSSTS Trigger: AGAAGTAGATGAATTTTTGCACTTCATGGCTGAGCC...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGGAGTAGAGGGAAAATaGATGAGAGAATTACATCCT | + |
Preference number: 2 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQGVEGK*MRELHP Trigger: AGGATGTAATTCTCTCATCCATTTTCCCTCTACTCC...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CTCACAGTTTATTGCCTCTGTAGGAAGCATAAAGGCCAGAGCCGGAGTCGGAGACCTAGTCAAGGAACATaGCCAAAGGACAGCCATTTG | + |
Preference number: 2 (lower is better) Translates to: LTVYCLCRKHKGQSRSRRPSQGT*PKDSHL Trigger: CAAATGGCTGTCCTTTGGCCATGTTCCTTGACTAGG...TCTCCGACTCCGGCTCTGGCCTTTATGCTTCCTACAGAGGCAATAAACTGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
||
3UTR-3UTR TCA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACATCACCAAGGAACTGTTaGAATCCAAGGCAAGACTCC | + |
Preference number: 2 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTSPRNC*NPRQDS Trigger: GGAGTCTTGCCTTGGATTTCAACAGTTCCTTGGTGA...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCTGGCTGTCCAGCTGCTaGCCTAGGATGGAAAGACGG | + |
Preference number: 2 (lower is better) Translates to: LSNALKVESEYSQAWNTIWLSSC*PRMERR Trigger: CCGTCTTTCCATCCTAGGGCAGCAGCTGGACAGCCA...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | TGGAACTGGTGCTCCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTTGATTTAAGAATAGTTCCATaGAGCAACATGCCAAGTAAG | + |
Preference number: 2 (lower is better) Translates to: WNWCSSPYTAGLPPRVFDLRIVP*SNMPSK Trigger: CTTACTTGGCATGTTGCTCCATGGAACTATTCTTAA...ATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGGAGCACCAGTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | AGTTCTCAGATGCAGAGCTCCTGTCATTTGTTCACTGCCACCCCAACCCCAATACCCAGAGTGTTTGATTaGCTCTATCTCCGAGGTAGA | + |
Preference number: 2 (lower is better) Translates to: SSQMQSSCHLFTATPTPIPRVFD*LYLRGR Trigger: TCTACCTCGGAGATAGAGCCAATCAAACACTCTGGG...TATTGGGGTTGGGGTGGCAGTGAACAAATGACAGGAGCTCTGCATCTGAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCCAGACACCTTGTCTCTaGAACTGGTGCTCCAGCCCC | + |
Preference number: 2 (lower is better) Translates to: LSNALKVESEYSQAWNTIQTPCL*NWCSSP Trigger: GGGGCTGGAGCACCAGTTCCAGAGACAAGGTGTCTG...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTTCACCAAGGAACTGTTaGAATCCAAGGCAAGACTCC | + |
Preference number: 2 (lower is better) Translates to: NEERRWAPFIKVTLVRGSSPRNC*NPRQDS Trigger: GGAGTCTTGCCTTGGATTTCAACAGTTCCTTGGTGA...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | CACCATTACCACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTTCACCAAGGAACTGTTaGAATCCAAGGCAAGACTCC | + |
Preference number: 2 (lower is better) Translates to: HHYHHLILLSPTKSEVSGSPRNC*NPRQDS Trigger: GGAGTCTTGCCTTGGATTTCAACAGTTCCTTGGTGA...ACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTGGTAATGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | TGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAAGAACAGTTAGTTCCCCTCAAATTCATCTACTTCTaGAGTGGGTCCTGTGAAGAT | + |
Preference number: 2 (lower is better) Translates to: WLEPERGLWKSQEQLVPLKFIYF*SGSCED Trigger: ATCTTCACAGGACCCACTTCAGAAGTAGATGAATTT...GAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | ATCTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCACCCGGTGAGGTCCACTaGGAATACTTCTGCCCCCTA | + |
Preference number: 2 (lower is better) Translates to: IFLMPSRLSLNIVKLGTPPGEVH*EYFCPL Trigger: TAGGGGGCAGAAGTATTCTCAGTGGACCTCACCGGG...TGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTCCGGAGAGAGGGCTTTaGAAAAGCCAAGAACAGTTA | + |
Preference number: 2 (lower is better) Translates to: NEERRWAPFIKVTLVRGSPERGL*KSQEQL Trigger: TAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGG...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | GAGTCGGAGAGAAAAGGACAGAGCATAGCATCTGTTTTCCATTTGTTTAATGCTCTCAGGGAGGATGCCTaGATCTCCCACAGCGAGGTT | + |
Preference number: 2 (lower is better) Translates to: ESERKGQSIASVFHLFNALREDA*ISHSEV Trigger: AACCTCGCTGTGGGAGATCCAGGCATCCTCCCTGAG...AGCATTAAACAAATGGAAAACAGATGCTATGCTCTGTCCTTTTCTCTCCGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | ATCTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATGCCCAGGACCACTCTaGCCTGAGAATGAATGGCAG | + |
Preference number: 2 (lower is better) Translates to: IFLMPSRLSLNIVKLGTPCPGPL*PENEWQ Trigger: CTGCCATTCATTCTCAGGGCAGAGTGGTCCTGGGCA...TGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCCAGTTAGTTCCCCTCTaGACTGCAGGGACCTCTGTT | + |
Preference number: 2 (lower is better) Translates to: LSNALKVESEYSQAWNTIQLVPL*TAGTSV Trigger: AACAGAGGTCCCTGCAGTGCAGAGGGGAACTAACTG...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | CTCACAGTTTATTGCCTCTGTAGGAAGCATAAAGGCCAGAGCCGGAGTCGGAGAGGAGTAGAGGGAAAATaGATGAGAGAATTACATCCT | + |
Preference number: 2 (lower is better) Translates to: LTVYCLCRKHKGQSRSRRGVEGK*MRELHP Trigger: AGGATGTAATTCTCTCATCCATTTTCCCTCTACTCC...TCTCCGACTCCGGCTCTGGCCTTTATGCTTCCTACAGAGGCAATAAACTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTTCAGATGTCAGAAACTaGGGTCCTAAGATATGGAAC | + |
Preference number: 2 (lower is better) Translates to: NEERRWAPFIKVTLVRGSSDVRN*GPKIWN Trigger: GTTCCATATCTTAGGACCTCAGTTTCTGACATCTGA...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGTCAGATGTCAGAAACTaGGGTCCTAAGATATGGAAC | + |
Preference number: 2 (lower is better) Translates to: KWMRELHPELPTWSRAKRSDVRN*GPKIWN Trigger: GTTCCATATCTTAGGACCTCAGTTTCTGACATCTGA...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACAGGCTCAGCCATGAAGTaGAAAAATTCATCTACTTCT | + |
Preference number: 2 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTGSAMK*KNSSTS Trigger: AGAAGTAGATGAATTTTTGCACTTCATGGCTGAGCC...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR GCA 90 bp | ATCTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCAACATGCCAAGTAAGATaGCCAGGACCACTCTGCCCT | + |
Preference number: 2 (lower is better) Translates to: IFLMPSRLSLNIVKLGTPTCQVR*PGPLCP Trigger: AGGGCAGAGTGGTCCTGGGCATCTTACTTGGCATGT...TGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | ATCTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATGCCCTGAGAATGAATaGCAGGAGCATACCCAGAGG | + |
Preference number: 2 (lower is better) Translates to: IFLMPSRLSLNIVKLGTPCPENE*QEHTQR Trigger: CCTCTGGGTATGCTCCTGCCATTCATTCTCAGGGCA...TGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCCACAGCTTACTAATCTaGCATGTAACCCTCACAACC | + |
Preference number: 2 (lower is better) Translates to: LSNALKVESEYSQAWNTIHSLLI*HVTLTT Trigger: GGTTGTGAGGGTTACATGTCAGATTAGTAAGCTGTG...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CCA 90 bp | ATCTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCACCCAGAGTGTTTGATTaGCTCTATCTCCGAGGTAGA | + |
Preference number: 2 (lower is better) Translates to: IFLMPSRLSLNIVKLGTPPRVFD*LYLRGR Trigger: TCTACCTCGGAGATAGAGCCAATCAAACACTCTGGG...TGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CAA 90 bp | AGAAAAGGACAGAGCATAGCATCTGTTTTCCATTTGTTTAATGCTTaGAGCCTTGTTCTCTTGAGGAATCCTCACAACATCCCTGTGAGG | + |
Preference number: 2 (lower is better) Translates to: RKGQSIASVFHLFNA*SLVLLRNPHNIPVR Trigger: CCTCACAGGGATGTTGTGAGGATTCCTCAAGAGAACAAGGCTCAAAGCATTAAACAAATGGAAAACAGATGCTATGCTCTGTCCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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3UTR-3UTR TCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAAAATTCATCTACTTCTaGAGTGGGTCCTGTGAAGAT | + |
Preference number: 2 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSKFIYF*SGSCED Trigger: ATCTTCACAGGACCCACTTCAGAAGTAGATGAATTT...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CCA 72 bp | AGGAGGCATCCGCAGCCGGCAGCCACAGATCCCAGCTaGAGGAAGCGCACCCTGGCACTGAGGACTAATGGC | + |
Preference number: 3 (lower is better) Translates to: RRHPQPAATDPS*RKRTLALRTNG Trigger: GCCATTAGTCCTCAGTGCCAGGGTGCGCTTCCTCCAGCTGGGATCTGTGGCTGCCGGCTGCGGATGCCTCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 72 bp | CTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATaGCACAGCCCACGCAAACTGCCGGCTGTCAGCACG | + |
Preference number: 3 (lower is better) Translates to: LPFLPGLRIDIR*HSPRKLPAVST Trigger: CGTGCTGACAGCCGGCAGTTTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CCA 72 bp | TCCTCTGTGCTCTGCACCGATGCCCTCCAGGCCCACTaGTCAGAGGAAGCGACAGCTGGGTCCTTTCTTCCT | + |
Preference number: 3 (lower is better) Translates to: SSVLCTDALQAH*SEEATAGSFLP Trigger: AGGAAGAAAGGACCCAGCTGTCGCTTCCTCTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | TGGAAAGACGGGAGGGAAGAAAGCCCCGCCCCAATCTaGCCTAACAGGAAGAAGGGCTCCTCCTGGTGCCCT | + |
Preference number: 3 (lower is better) Translates to: WKDGREESPAPI*PNRKKGSSWCP Trigger: AGGGCACCAGGAGGAGCCCTTCTTCCTGTTAGGCCAGATTGGGGCGGGGCTTTCTTCCCTCCCGTCTTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 72 bp | GGAGACCACCACTACCTGTACTCTTCCTCTGTGCTCTaGACCGATGCCCTCCAGGCCCACTGGTCAGAGGAA | + |
Preference number: 3 (lower is better) Translates to: GDHHYLYSSSVL*TDALQAHWSEE Trigger: TTCCTCTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGAAGAGTACAGGTAGTGGTGGTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | AAGCAGGAGACCACCACTACCTGTACTCTTCCTCTGTaGTCTGCACCGATGCCCTCCAGGCCCACTGGTCAG | + |
Preference number: 3 (lower is better) Translates to: KQETTTTCTLPL*SAPMPSRPTGQ Trigger: CTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGAAGAGTACAGGTAGTGGTGGTCTCCTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | GTACTCTTCCTCTGTGCTCTGCACCGATGCCCTCCAGGCCCACTGGTCAGAGGAGTTCGTGCGTGGCCCTaGTTTCTTGGTTCAGGAACC | + |
Preference number: 3 (lower is better) Translates to: VLFLCALHRCPPGPLVRGVRAWP*FLGSGT Trigger: GGTTCCTGAACCAAGAAACAAGGGCCACGCACGAAC...TCCTCTGACCAGTGGGCCTGGAGGGCATCGGTGCAGAGCACAGAGGAAGAGTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGAGGGCATCTCCCCCTTaGAGCCCACTGTATCATGCC | + |
Preference number: 3 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQRASPP*SPLYHA Trigger: GGCATGATACAGTGGGCTCAAAGGGGGAGATGCCCT...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | AGAAGCCAAGGCAAGTACACAGGAGCGCTAGAGGCTTaGGGTTATCAGCTACCACGGCCACGGCCATCTCAG | + |
Preference number: 3 (lower is better) Translates to: RSQGKYTGALEA*GYQLPRPRPSQ Trigger: CTGAGATGGCCGTGGCCGTGGTAGCTGATAACCCCAAGCCTCTAGCGCTCCTGTGTACTTGCCTTGGCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTAGCACACTGGATGGCTaGAGCCGGAGAGAGGGCTTT | + |
Preference number: 3 (lower is better) Translates to: GLSATTATAISAEHTVFSSTLDG*SRREGF Trigger: AAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCT...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR TCA 72 bp | ACTCCAAAGCCCAGGAAGAGGGGGAAGGTGACTGGCTaGCTCAGCCTGCAAGTGCTTAGAGATCTGGAGCTG | + |
Preference number: 3 (lower is better) Translates to: TPKPRKRGKVTG*LSLQVLRDLEL Trigger: CAGCTCCAGATCTCTAAGCACTTGCAGGCTGAGTCAGCCAGTCACCTTCCCCCTCTTCCTGGGCTTTGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | TGCCCCCTAGTCCCCATTCCTCTACTGAATCCCACCTaGCTTGCTTCTGAGCCACTGGGAGAAGAGGATCTG | + |
Preference number: 3 (lower is better) Translates to: CPLVPIPLLNPT*LASEPLGEEDL Trigger: CAGATCCTCTTCTCCCAGTGGCTCAGAAGCAAGGCAGGTGGGATTCAGTAGAGGAATGGGGACTAGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | GGAGACCTCCCCTGGGTCCCTTCTTTCCACAGTTCGTaGGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTT | + |
Preference number: 3 (lower is better) Translates to: GDLPWVPSFHSS*VALVSWFRNQV Trigger: AACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGGAGGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | GGAGCAACATGCCAAGTAAGATGCCCAGGACCACTCTaGCCTGAGAATGAATGGCAGGAGCATACCCAGAGG | + |
Preference number: 3 (lower is better) Translates to: GATCQVRCPGPL*PENEWQEHTQR Trigger: CCTCTGGGTATGCTCCTGCCATTCATTCTCAGGGCAGAGTGGTCCTGGGCATCTTACTTGGCATGTTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | GTGCCTTTACTACCTTATTGTCCAGGAGACCTCCCCTaGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTT | + |
Preference number: 3 (lower is better) Translates to: VPLLPYCPGDLP*VPSFHSSCVAL Trigger: AAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGGAGGTCTCCTGGACAATAAGGTAGTAAAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | TGGCCTGACTGCTTCCTCTCAGAGGAGAAAAGCCTCTaGTATAGCCAGGCAGCAAGAATCCCGATCCCCTTC | + |
Preference number: 3 (lower is better) Translates to: WPDCFLSEEKSL*YSQAARIPIPF Trigger: GAAGGGGATCGGGATTCTTGCTGCCTGGCTATACCAGAGGCTTTTCTCCTCTGAGAGGAAGCAGTCAGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR TCA 72 bp | CCTGCCTTGCTTCTGAGCCACTGGGAGAAGAGGATCTaGGATAGGCAAGCAGACACCTTGTCTCTGGAACTG | + |
Preference number: 3 (lower is better) Translates to: PALLLSHWEKRI*DRQADTLSLEL Trigger: CAGTTCCAGAGACAAGGTGTCTGCTTGCCTATCTCAGATCCTCTTCTCCCAGTGGCTCAGAAGCAAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | ACCTCCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTaGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACA | + |
Preference number: 3 (lower is better) Translates to: TSPGSLLSTVRA*PLFLGSGTKLT Trigger: TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | CCCTATACTGCAGGCCTCCCTCCCAGAGTGTTTGATTaGCTCTATCTCCGAGGTAGAAAGCTGCGTGGATAC | + |
Preference number: 3 (lower is better) Translates to: PYTAGLPPRVFD*LYLRGRKLRGY Trigger: GTATCCACGCAGCTTTCTACCTCGGAGATAGAGCCAATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | CAGGGCATTGCGGGGGTACAAACTCAGACACTTTCTTaGTCTCAAGACTTGCTTAAGGGCATTTGGGTGGGG | + |
Preference number: 3 (lower is better) Translates to: QGIAGVQTQTLS*SQDLLKGIWVG Trigger: CCCCACCCAAATGCCCTTAAGCAAGTCTTGAGAGCAAGAAAGTGTCTGAGTTTGTACCCCCGCAATGCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | AGCAAGAATAGGCTGGCAACTGATAGCAGCCTATTGTaGATGGGGCGTCAGCCAGAGGGAAGCAAGAGTTCT | + |
Preference number: 3 (lower is better) Translates to: SKNRLATDSSLL*MGRQPEGSKSS Trigger: AGAACTCTTGCTTCCCTCTGGCTGACGCCCCATCCACAATAGGCTGCTATCAGTTGCCAGCCTATTCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CCA 72 bp | TTTCTTGCTCTCAAGACTTGCTTAAGGGCATTTGGGTaGGGTGCCCCCAGAAGCCAAGGCAAGTACACAGGA | + |
Preference number: 3 (lower is better) Translates to: FLALKTCLRAFG*GAPRSQGKYTG Trigger: TCCTGTGTACTTGCCTTGGCTTCTGGGGGCACCCCACCCAAATGCCCTTAAGCAAGTCTTGAGAGCAAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGATCACCAAGGAACTGTaGAAATCCAAGGCAAGACTC | + |
Preference number: 3 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQITKEL*KSKARL Trigger: GAGTCTTGCCTTGGATTTCAACAGTTCCTTGGTGAT...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | AGTTCTCAGATGCAGAGCTCCTGTCATTTGTTCACTGCCACCCCAACCCCAATAGTTCGTGCGTGGCCCTaGTTTCTTGGTTCAGGAACC | + |
Preference number: 3 (lower is better) Translates to: SSQMQSSCHLFTATPTPIVRAWP*FLGSGT Trigger: GGTTCCTGAACCAAGAAACAAGGGCCACGCACGAAC...TATTGGGGTTGGGGTGGCAGTGAACAAATGACAGGAGCTCTGCATCTGAGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | CTCACAGTTTATTGCCTCTGTAGGAAGCATAAAGGCCAGAGCCGGAGTCGGAGAGCCGGAGAGAGGGCTTaGGAAAAGCCAAGAACAGTT | + |
Preference number: 3 (lower is better) Translates to: LTVYCLCRKHKGQSRSRRAGERA*EKPRTV Trigger: AACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGC...TCTCCGACTCCGGCTCTGGCCTTTATGCTTCCTACAGAGGCAATAAACTGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | ACTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCACAGCCCACGCAACCTAAGATATGGAACTaGTCTAAGGTTGATTGTACA | + |
Preference number: 3 (lower is better) Translates to: TPLPPGAANRHQMAQPTQPKIWN*SKVDCT Trigger: TGTACAATCAACCTTAGACAAGTTCCATATCTTAGG...TTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR TCA 72 bp | CGGAGCCGAGCCACTCATAAAGTAGCTTTGCCAGGCTaGTACACCTTCCAGTTCAGGACACACAGGATCTTT | + |
Preference number: 3 (lower is better) Translates to: RSRATHKVALPG*YTFQFRTHRIF Trigger: AAAGATCCTGTGTGTCCTGAACTGGAAGGTGTATCAGCCTGGCAAAGCTACTTTATGAGTGGCTCGGCTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR-3UTR CAA 90 bp | CTTCAGTCTTTATTAGGATCTATAGAGAGCCCATCTCCTAGACTGACCTACACCAGGGCATCTCCCCCTTaGAGCCCACTGTATCATGCC | + |
Preference number: 3 (lower is better) Translates to: LQSLLGSIESPSPRLTYTRASPP*SPLYHA Trigger: GGCATGATACAGTGGGCTCAAAGGGGGAGATGCCCT...GGTGTAGGTCAGTCTAGGAGATGGGCTCTCTATAGATCCTAATAAAGACTGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | CTTACTAATCTGACATGTAACCCTCACAACCAAGGATaGGCTAGGGAACTCAGATCAAGGAGGTACATCGGC | + |
Preference number: 3 (lower is better) Translates to: LTNLTCNPHNQG*ARELRSRRYIG Trigger: GCCGATGTACCTCCTTGATCTGAGTTCCCTAGCGCATCCTTGGTTGTGAGGGTTACATGTCAGATTAGTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR GCA 72 bp | GGGCTTTGGAAAAGCCAAGAACAGTTAGTTCCCCTCTaGACTGCAGGGACCTCTGTTCATCAAGCTGTATTT | + |
Preference number: 3 (lower is better) Translates to: GLWKSQEQLVPL*TAGTSVHQAVF Trigger: AAATACAGCTTGATGAACAGAGGTCCCTGCAGTGCAGAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CAA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGATCACCAAGGAACTGTaGAAATCCAAGGCAAGACTC | + |
Preference number: 3 (lower is better) Translates to: MRELHPELPTWSRAKRVSITKEL*KSKARL Trigger: GAGTCTTGCCTTGGATTTCAACAGTTCCTTGGTGAT...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR CAA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGATCACCAAGGAACTGTaGAAATCCAAGGCAAGACTC | + |
Preference number: 3 (lower is better) Translates to: KWMRELHPELPTWSRAKRITKEL*KSKARL Trigger: GAGTCTTGCCTTGGATTTCAACAGTTCCTTGGTGAT...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR CAA 90 bp | AGTTCTCAGATGCAGAGCTCCTGTCATTTGTTCACTGCCACCCCAACCCCAATACTAATGCCCTCAAGGTaGAGTCTGAATATAGTCAAG | + |
Preference number: 3 (lower is better) Translates to: SSQMQSSCHLFTATPTPILMPSR*SLNIVK Trigger: CTTGACTATATTCAGACTCAACCTTGAGGGCATTAG...TATTGGGGTTGGGGTGGCAGTGAACAAATGACAGGAGCTCTGCATCTGAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR GCA 72 bp | GCTAGGGTTTCTGCACATTGTGGCTCAGCCATGAAGTaGAAAAATTCATCTACTTCTGAAGTGGGTCCTGTG | + |
Preference number: 3 (lower is better) Translates to: ARVSAHCGSAMK*KNSSTSEVGPV Trigger: CACAGGACCCACTTCAGAAGTAGATGAATTTTTGCACTTCATGGCTGAGCCACAATGTGCAGAAACCCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CCA 72 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATaGTCCAGAGCTAAGAGGGTATCGGCAACATCAATC | + |
Preference number: 3 (lower is better) Translates to: KWMRELHPELPT*SRAKRVSATSI Trigger: GATTGATGTTGCCGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR-3UTR CAA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACACCTAAGATATGGAACTaGTCTAAGGTTGATTGTACA | + |
Preference number: 3 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTPKIWN*SKVDCT Trigger: TGTACAATCAACCTTAGACAAGTTCCATATCTTAGG...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR TCA 72 bp | TGGCTCAGCCATGAAGTGCAAAAATTCATCTACTTCTaGAGTGGGTCCTGTGAAGATCACCAAGGAACTGTT | + |
Preference number: 3 (lower is better) Translates to: WLSHEVQKFIYF*SGSCEDHQGTV Trigger: AACAGTTCCTTGGTGATCTTCACAGGACCCACTTCAGAAGTAGATGAATTTTTGCACTTCATGGCTGAGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CCA 72 bp | TATCTCCGAGGTAGAAAGCTGCGTGGATACCTTCCCTaGTTCAGCAGTCTTCAGTCTTTATTAGGATCTATA | + |
Preference number: 3 (lower is better) Translates to: YLRGRKLRGYLP*FSSLQSLLGSI Trigger: TATAGATCCTAATAAAGACTGAAGACTGCTGAACCAGGGAAGGTATCCACGCAGCTTTCTACCTCGGAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR-3UTR CAA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGCCTAAGATATGGAACTaGTCTAAGGTTGATTGTACA | + |
Preference number: 3 (lower is better) Translates to: KWMRELHPELPTWSRAKRPKIWN*SKVDCT Trigger: TGTACAATCAACCTTAGACAAGTTCCATATCTTAGG...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | TGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAAGAACAGTTAGTTCCCCTCGAGGCGAGCCACCCTTaGGACCCGGGCTGCTCGTGG | + |
Preference number: 4 (lower is better) Translates to: WLEPERGLWKSQEQLVPLEASHP*DPGCSW Trigger: CCACGAGCAGCCCGGGTCTCAAGGGTGGCTCGCCTC...GAGGGGAACTAACTGTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGGAGGCGAGCCACCCTTaGGACCCGGGCTGCTCGTGG | + |
Preference number: 4 (lower is better) Translates to: MRELHPELPTWSRAKRVSEASHP*DPGCSW Trigger: CCACGAGCAGCCCGGGTCTCAAGGGTGGCTCGCCTC...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | CTCACAGTTTATTGCCTCTGTAGGAAGCATAAAGGCCAGAGCCGGAGTCGGAGAGCGCCAAGATCCCACTaGCTCTCCGCAGCCAGCGGG | + |
Preference number: 4 (lower is better) Translates to: LTVYCLCRKHKGQSRSRRAPRSH*LSAASG Trigger: CCCGCTGGCTGCGGAGAGGCAGTGGGATCTTGGCGC...TCTCCGACTCCGGCTCTGGCCTTTATGCTTCCTACAGAGGCAATAAACTGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | CTGTCCAGCTGCTGCCCTAGGATGGAAAGACGGGAGGGAAGAAAGCCCCGCCCCCAGTCAGAAAGATGGTaGAGCCCAAAGCTATCAGGT | + |
Preference number: 4 (lower is better) Translates to: LSSCCPRMERREGRKPRPQSERW*SPKLSG Trigger: ACCTGATAGCTTTGGGCTTCACCATCTTTCTGACTG...GGGGCGGGGCTTTCTTCCCTCCCGTCTTTCCATCCTAGGGCAGCAGCTGGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
||
CDS-3UTR GCA 90 bp | CGTTCACAGCACACTGGATGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAAGCAGAGCCCACACAGTaGCTGTCCTCCAGTGGCCAA | + |
Preference number: 4 (lower is better) Translates to: RSQHTGWLEPERGLWKSQAEPTQ*LSSSGQ Trigger: TTGGCCACTGGAGGACAGGCACTGTGTGGGCTCTGC...TTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTCACAGAGGATGGCCATaGTCTGCCCTGCCCAGTGGA | + |
Preference number: 4 (lower is better) Translates to: GLSATTATAISAEHTVFSHRGWP*SALPSG Trigger: TCCACTGGGCAGGGCAGACCATGGCCATCCTCTGTG...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACAGACCCGGGCTGCTCGTaGACAGAGGAGGCAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTDPGCS*TEEAEP Trigger: GGGCTCTGCCTCCTCTGTCCACGAGCAGCCCGGGTC...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | AGTTCTCAGATGCAGAGCTCCTGTCATTTGTTCACTGCCACCCCAACCCCAATAGACCCGGGCTGCTCGTaGACAGAGGAGGCAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: SSQMQSSCHLFTATPTPIDPGCS*TEEAEP Trigger: GGGCTCTGCCTCCTCTGTCCACGAGCAGCCCGGGTC...TATTGGGGTTGGGGTGGCAGTGAACAAATGACAGGAGCTCTGCATCTGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | ACTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCACAGCCCACGCAAGCTGTACCTTTGATCTaGGCCTGGAACCACACTGAG | + |
Preference number: 4 (lower is better) Translates to: TPLPPGAANRHQMAQPTQAVPLI*AWNHTE Trigger: CTCAGTGTGGTTCCAGGCCCAGATCAAAGGTACAGC...TTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CAA 72 bp | CAGAAGCCAAGGCAAGTACACAGGAGCGCTAGAGGCTaGGGGTTATCAGCTACCACGGCCACGGCCATCTCA | + |
Preference number: 4 (lower is better) Translates to: QKPRQVHRSARG*GLSATTATAIS Trigger: TGAGATGGCCGTGGCCGTGGTAGCTGATAACCCCAAGCCTCTAGCGCTCCTGTGTACTTGCCTTGGCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGTCTGCCCTGCCCAGTaGAGTCGAATCCGGGTTTTT | + |
Preference number: 4 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQVCPAQ*SRIRVF Trigger: AAAAACCCGGATTCGACTCCACTGGGCAGGGCAGAC...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR CAA 72 bp | CCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTaGATTGGCTCTATCTCCGAGGTAGAAAGCTGCGTG | + |
Preference number: 4 (lower is better) Translates to: PAPILQASLPEC*IGSISEVESCV Trigger: CACGCAGCTTTCTACCTCGGAGATAGAGCCAATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
CDS-3UTR TCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGAGGCGAGCCACCCTTaGGACCCGGGCTGCTCGTGG | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSEASHP*DPGCSW Trigger: CCACGAGCAGCCCGGGTCTCAAGGGTGGCTCGCCTC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR GCA 90 bp | CGTTCACAGCACACTGGATGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAACCCAAAGCTATCAGGTaGGCCAAGATCCCACTGCCT | + |
Preference number: 4 (lower is better) Translates to: RSQHTGWLEPERGLWKSQPKAIR*AKIPLP Trigger: AGGCAGTGGGATCTTGGCGCACCTGATAGCTTTGGG...TTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACAGGACAGCACAGAGGATaGCCATGGTCTGCCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTGQHRG*PWSALP Trigger: GGGCAGGGCAGACCATGGCCATCCTCTGTGCTGTCC...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGCTGTACCTTTGATCTaGGCCTGGAACCACACTGAG | + |
Preference number: 4 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQAVPLI*AWNHTE Trigger: CTCAGTGTGGTTCCAGGCCCAGATCAAAGGTACAGC...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
3UTR CAA 72 bp | AACCATCCCCTCCACGTTCACAGCACACTGGATGGCTaGAGCCGGAGAGAGGGCTTTGGAAAAGCCAAGAAC | + |
Preference number: 4 (lower is better) Translates to: NHPLHVHSTLDG*SRREGFGKAKN Trigger: GTTCTTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACGTGGAGGGGATGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
3UTR CAA 72 bp | GCTGATACACCTTCCAGTTCAGGACACACAGGATCTTaGTTCCAGCCACAGACCAGGGCATTGCGGGGGTAC | + |
Preference number: 4 (lower is better) Translates to: ADTPSSSGHTGS*FQPQTRALRGY Trigger: GTACCCCCGCAATGCCCTGGTCTGTGGCTGGAACAAAGATCCTGTGTGTCCTGAACTGGAAGGTGTATCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
CDS-3UTR GCA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACAAGGATGGCCATGGTCTaGCCTGCCCAGTGGAGTCGA | + |
Preference number: 4 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTRMAMV*PAQWSR Trigger: TCGACTCCACTGGGCAGGGCAGACCATGGCCATCCT...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR GCA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGAGGATGGCCATGGTCTaGCCTGCCCAGTGGAGTCGA | + |
Preference number: 4 (lower is better) Translates to: MRELHPELPTWSRAKRVSRMAMV*PAQWSR Trigger: TCGACTCCACTGGGCAGGGCAGACCATGGCCATCCT...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGCACAGAGGATGGCCATaGTCTGCCCTGCCCAGTGGA | + |
Preference number: 4 (lower is better) Translates to: MRELHPELPTWSRAKRVSHRGWP*SALPSG Trigger: TCCACTGGGCAGGGCAGACCATGGCCATCCTCTGTG...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGACCCGGGCTGCTCGTaGACAGAGGAGGCAGAGCCC | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSDPGCS*TEEAEP Trigger: GGGCTCTGCCTCCTCTGTCCACGAGCAGCCCGGGTC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | CCCCTGGGTCCCTTCTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGCTCCACCTTCTTCCTTaGCAAGTAGGAGCTGGAGAT | + |
Preference number: 4 (lower is better) Translates to: PLGPFFPQFVRGPCFLVQLHLLP*QVGAGD Trigger: ATCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAG...CTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAGAAGGGACCCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | TGGAACTGGTGCTCCAGCCCCTATACTGCAGGCCTCCCTCCCAGAGTGTTTGATCTCCACCTTCTTCCTTaGCAAGTAGGAGCTGGAGAT | + |
Preference number: 4 (lower is better) Translates to: WNWCSSPYTAGLPPRVFDLHLLP*QVGAGD Trigger: ATCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAG...ATCAAACACTCTGGGAGGGAGGCCTGCAGTATAGGGGCTGGAGCACCAGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
||
CDS-3UTR CCA 90 bp | CACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTTCTCCCAAATCTCGGCTCCCTCGCTaGAGCGGGAACCAGACCTAC | + |
Preference number: 4 (lower is better) Translates to: HHLILLSPTKSEVSGSPKSRLPR*SGNQTY Trigger: GTAGGTCTGGTTCCCGCTCCAGCGAGGGAGCCGAGA...TTTGGGAGAACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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3UTR CAA 72 bp | TCCTTAGCTCAGCTAAGGAGCCCAGGAGGCAAGGGCTaGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAAC | + |
Preference number: 4 (lower is better) Translates to: SLAQLRSPGGKG*VRLLPSVPLKN Trigger: GTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCCCTTGCCTCCTGGGCTCCTTAGCTGAGCTAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
||
CDS-3UTR GCA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGCAGAGCCCACACAGTaGCTGTCCTCCAGTGGCCAA | + |
Preference number: 4 (lower is better) Translates to: KWMRELHPELPTWSRAKRAEPTQ*LSSSGQ Trigger: TTGGCCACTGGAGGACAGGCACTGTGTGGGCTCTGC...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | GGGTTATCAGCTACCACGGCCACGGCCATCTCAGCTGAGCACACTGTATTCTCTACCACACTGAGTACATaGCCAAGAGCACCGTTACTG | + |
Preference number: 4 (lower is better) Translates to: GLSATTATAISAEHTVFSTTLST*PRAPLL Trigger: CAGTAACGGTGCTCTTGGGCATGTACTCAGTGTGGT...AGAGAATACAGTGTGCTCAGCTGAGATGGCCGTGGCCGTGGTAGCTGATAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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3UTR CAA 72 bp | AACCTTCCACTTGTACCCAGTAGGGCATCTCCCCCTTaGAGCCCACTGTATCATGCCTCAACAGTAGCAGCT | + |
Preference number: 4 (lower is better) Translates to: NLPLVPSRASPP*SPLYHASTVAA Trigger: AGCTGCTACTGTTGAGGCATGATACAGTGGGCTCAAAGGGGGAGATGCCCTACTGGGTACAAGTGGAAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CAA 72 bp | CAAAGCAAGAATAGGCTGGCAACTGATAGCAGCCTATaGTGGATGGGGCGTCAGCCAGAGGGAAGCAAGAGT | + |
Preference number: 4 (lower is better) Translates to: QSKNRLATDSSL*WMGRQPEGSKS Trigger: ACTCTTGCTTCCCTCTGGCTGACGCCCCATCCACAATAGGCTGCTATCAGTTGCCAGCCTATTCTTGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA | + |
Preference number: 4 (lower is better) Translates to: MRELHPELPTWSRAKRVSSDGRA*GEPPLR Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTGGCCTGGAACCACACTaGGTACATGCCCAAGAGCAC | + |
Preference number: 4 (lower is better) Translates to: NEERRWAPFIKVTLVRGSGLEPH*VHAQEH Trigger: GTGCTCTTGGGCATGTACTCAGTGTGGTTCCAGGCC...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACAACCAGGCTGTACCTTTaGTCTGGGCCTGGAACCACA | + |
Preference number: 4 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTTRLYL*SGPGTT Trigger: TGTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGT...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGTGGAGATCTGGTGCATaGTCACCAGGGCTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: MRELHPELPTWSRAKRVSWRSGA*SPGLGT Trigger: TGTACCCAGCCCTGGTGATCATGCACCAGATCTCCA...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGGCTCCTATCCAGCTGTaGCAGGACACCAAATGGGAC | + |
Preference number: 4 (lower is better) Translates to: MRELHPELPTWSRAKRVSAPIQL*QDTKWD Trigger: GTCCCATTTGGTGTCCTGGCACAGCTGGATAGGAGC...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | CACCATTACCACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTGAGCTGGAGATCTGGTaGATGATCACCAGGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: HHYHHLILLSPTKSEVSGELEIW*MITRAG Trigger: CCCAGCCCTGGTGATCATGCACCAGATCTCCAGCTC...ACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTGGTAATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | CACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTTCTCCCAAAGAGCTGGAGATCTGGTaGATGATCACCAGGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: HHLILLSPTKSEVSGSPKELEIW*MITRAG Trigger: CCCAGCCCTGGTGATCATGCACCAGATCTCCAGCTC...TTTGGGAGAACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTGAGCTGGAGATCTGGTaGATGATCACCAGGGCTGGG | + |
Preference number: 4 (lower is better) Translates to: NEERRWAPFIKVTLVRGSELEIW*MITRAG Trigger: CCCAGCCCTGGTGATCATGCACCAGATCTCCAGCTC...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGGACAGCACAGAGGATaGCCATGGTCTGCCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSGQHRG*PWSALP Trigger: GGGCAGGGCAGACCATGGCCATCCTCTGTGCTGTCC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | CACCATTACCACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTACCAGGCTGTACCTTTaGTCTGGGCCTGGAACCACA | + |
Preference number: 4 (lower is better) Translates to: HHYHHLILLSPTKSEVSGTRLYL*SGPGTT Trigger: TGTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGT...ACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTGGTAATGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | AATGAGGAAAGGAGATGGGCGCCCTTTATCAAAGTGACCCTAGTAAGAGGGTCTTGGAGATCTGGTGCATaGTCACCAGGGCTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: NEERRWAPFIKVTLVRGSWRSGA*SPGLGT Trigger: TGTACCCAGCCCTGGTGATCATGCACCAGATCTCCA...AGACCCTCTTACTAGGGTCACTTTGATAAAGGGCGCCCATCTCCTTTCCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | CTTCAGTCTTTATTAGGATCTATAGAGAGCCCATCTCCTAGACTGACCTACACCGCAGAGCCCACACAGTaGCTGTCCTCCAGTGGCCAA | + |
Preference number: 4 (lower is better) Translates to: LQSLLGSIESPSPRLTYTAEPTQ*LSSSGQ Trigger: TTGGCCACTGGAGGACAGGCACTGTGTGGGCTCTGC...GGTGTAGGTCAGTCTAGGAGATGGGCTCTCTATAGATCCTAATAAAGACTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | TTTAAAGTGACTTCAGTGCCTTTACTACCTTATTGTCCAGGAGACCTCCCCTGGTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGA | + |
Preference number: 4 (lower is better) Translates to: FKVTSVPLLPYCPGDLPWSDGRA*GEPPLR Trigger: TCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGA...CCAGGGGAGGTCTCCTGGACAATAAGGTAGTAAAGGCACTGAAGTCACTTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGGCCTGGAACCACACTaGGTACATGCCCAAGAGCAC | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSGLEPH*VHAQEH Trigger: GTGCTCTTGGGCATGTACTCAGTGTGGTTCCAGGCC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | CTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCATCGGCCTGGAACCACACTaGGTACATGCCCAAGAGCAC | + |
Preference number: 4 (lower is better) Translates to: LSNALKVESEYSQAWNTIGLEPH*VHAQEH Trigger: GTGCTCTTGGGCATGTACTCAGTGTGGTTCCAGGCC...GATGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAACCAGGCTGTACCTTTaGTCTGGGCCTGGAACCACA | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSTRLYL*SGPGTT Trigger: TGTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGT...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCATGGAGATCTGGTGCATaGTCACCAGGGCTGGGTACA | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSWRSGA*SPGLGT Trigger: TGTACCCAGCCCTGGTGATCATGCACCAGATCTCCA...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | ATCTTTCTAATGCCCTCAAGGTTGAGTCTGAATATAGTCAAGCTTGGAACACCAAGGATGGCCATGGTCTaGCCTGCCCAGTGGAGTCGA | + |
Preference number: 4 (lower is better) Translates to: IFLMPSRLSLNIVKLGTPRMAMV*PAQWSR Trigger: TCGACTCCACTGGGCAGGGCAGACCATGGCCATCCT...TGGTGTTCCAAGCTTGACTATATTCAGACTCAACCTTGAGGGCATTAGAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGCTCCTATCCAGCTGTaGCAGGACACCAAATGGGAC | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSAPIQL*QDTKWD Trigger: GTCCCATTTGGTGTCCTGGCACAGCTGGATAGGAGC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | CACCATTACCACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTACCACACTGAGTACATaGCCAAGAGCACCGTTACTG | + |
Preference number: 4 (lower is better) Translates to: HHYHHLILLSPTKSEVSGTTLST*PRAPLL Trigger: CAGTAACGGTGCTCTTGGGCATGTACTCAGTGTGGT...ACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTGGTAATGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | CTTCAGTCTTTATTAGGATCTATAGAGAGCCCATCTCCTAGACTGACCTACACCGTCTGCCCTGCCCAGTaGAGTCGAATCCGGGTTTTT | + |
Preference number: 4 (lower is better) Translates to: LQSLLGSIESPSPRLTYTVCPAQ*SRIRVF Trigger: AAAAACCCGGATTCGACTCCACTGGGCAGGGCAGAC...GGTGTAGGTCAGTCTAGGAGATGGGCTCTCTATAGATCCTAATAAAGACTGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAGTCTGCCCTGCCCAGTaGAGTCGAATCCGGGTTTTT | + |
Preference number: 4 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSVCPAQ*SRIRVF Trigger: AAAAACCCGGATTCGACTCCACTGGGCAGGGCAGAC...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | TTTAAAGTGACTTCAGTGCCTTTACTACCTTATTGTCCAGGAGACCTCCCCTGGGCTGTACCTTTGATCTaGGCCTGGAACCACACTGAG | + |
Preference number: 4 (lower is better) Translates to: FKVTSVPLLPYCPGDLPWAVPLI*AWNHTE Trigger: CTCAGTGTGGTTCCAGGCCCAGATCAAAGGTACAGC...CCAGGGGAGGTCTCCTGGACAATAAGGTAGTAAAGGCACTGAAGTCACTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CCA 90 bp | AAATGGATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGCTCCACCTTCTTCCTTaGCAAGTAGGAGCTGGAGAT | + |
Preference number: 4 (lower is better) Translates to: KWMRELHPELPTWSRAKRLHLLP*QVGAGD Trigger: ATCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAG...CCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCATCCATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CAA 72 bp | AGGACAGCCATTTGTGTTCCTGCTAAGGCCCCTTCCTaGCTACTGAGAAGCCCAGGTAGTATTCAGACATTA | + |
Preference number: 4 (lower is better) Translates to: RTAICVPAKAPS*LLRSPGSIQTL Trigger: TAATGTCTGAATACTACCTGGGCTTCTCAGTAGCAAGGAAGGGGCCTTAGCAGGAACACAAATGGCTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR TCA 90 bp | GAGTCGGAGAGAAAAGGACAGAGCATAGCATCTGTTTTCCATTTGTTTAATGCTAGAACGCCAAGGCCATaGACACAGGGTGCCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: ESERKGQSIASVFHLFNARTPRP*TQGARR Trigger: TCTCCTGGCACCCTGTGTTCATGGCCTTGGCGTTCT...AGCATTAAACAAATGGAAAACAGATGCTATGCTCTGTCCTTTTCTCTCCGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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CDS-3UTR GCA 90 bp | TTTAAAGTGACTTCAGTGCCTTTACTACCTTATTGTCCAGGAGACCTCCCCTGGACCACACTGAGTACATaGCCAAGAGCACCGTTACTG | + |
Preference number: 4 (lower is better) Translates to: FKVTSVPLLPYCPGDLPWTTLST*PRAPLL Trigger: CAGTAACGGTGCTCTTGGGCATGTACTCAGTGTGGT...CCAGGGGAGGTCTCCTGGACAATAAGGTAGTAAAGGCACTGAAGTCACTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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3UTR CAA 72 bp | GAAACTGAGGTCCTAAGATATGGAACTTGTCTAAGGTaGATTGTACAGCACTGCCTGAGAGGTTACGGGCTC | + |
Preference number: 4 (lower is better) Translates to: ETEVLRYGTCLR*IVQHCLRGYGL Trigger: GAGCCCGTAACCTCTCAGGCAGTGCTGTACAATCAACCTTAGACAAGTTCCATATCTTAGGACCTCAGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 90 bp | AACCAGGCCACACGTCAGATGGTAGAGCTTGAGGCGAGCCACCCTTaGGACCCGGGCTGCTCGTGGACAGAGGAGGCAGAGCCCACACAG | + |
Preference number: 5 (lower is better) Translates to: NQATRQMVELEASHP*DPGCSWTEEAEPTQ Trigger: CTGTGTGGGCTCTGCCTCCTCTGTCCACGAGCAGCCCGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACGTGTGGCCTGGTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 90 bp | CTGGGTACAATGGTAGTCCCAGGCACAGGTACCAGGCTGTACCTTTaGTCTGGGCCTGGAACCACACTGAGTACATGCCCAAGAGCACCG | + |
Preference number: 5 (lower is better) Translates to: LGTMVVPGTGTRLYL*SGPGTTLSTCPRAP Trigger: CGGTGCTCTTGGGCATGTACTCAGTGTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGTACCTGTGCCTGGGACTACCATTGTACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 90 bp | AGAAAAGACTGGTTCCGGGCCGGGACAGCACAGTCAGAAAGATGGTaGAGCCCAAAGCTATCAGGTGCGCCAAGATCCCACTGCCTCTCC | + |
Preference number: 5 (lower is better) Translates to: RKDWFRAGTAQSERW*SPKLSGAPRSHCLS Trigger: GGAGAGGCAGTGGGATCTTGGCGCACCTGATAGCTTTGGGCTTCACCATCTTTCTGACTGTGCTGTCCCGGCCCGGAACCAGTCTTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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CDS GCA 90 bp | ATGATGAAGCCCAAGCCTAGGACAGCACAGAGGATGGCCATGGTCTaGCCTGCCCAGTGGAGTCGAATCCGGGTTTTTCGAGAGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: MMKPKPRTAQRMAMV*PAQWSRIRVFREQK Trigger: CTTCTGCTCTCGAAAAACCCGGATTCGACTCCACTGGGCAGGGCAGACCATGGCCATCCTCTGTGCTGTCCTAGGCTTGGGCTTCATCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS CCA 90 bp | AAGCCTAGGACAGCACAGAGGATGGCCATGGTCTGCCCTGCCCAGTaGAGTCGAATCCGGGTTTTTCGAGAGCAGAAGAAGAACAGGGAG | + |
Preference number: 5 (lower is better) Translates to: KPRTAQRMAMVCPAQ*SRIRVFREQKKNRE Trigger: CTCCCTGTTCTTCTTCTGCTCTCGAAAAACCCGGATTCGACTCCACTGGGCAGGGCAGACCATGGCCATCCTCTGTGCTGTCCTAGGCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 90 bp | TCTCCACCTTCTTCCTTGGCAAGTAGGAGCTGGAGATCTGGTGCATaGTCACCAGGGCTGGGTACAATGGTAGTCCCAGGCACAGGTACC | + |
Preference number: 5 (lower is better) Translates to: SPPSSLASRSWRSGA*SPGLGTMVVPGTGT Trigger: GGTACCTGTGCCTGGGACTACCATTGTACCCAGCCCTGGTGATCATGCACCAGATCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | ACTCCCCTTCCTCCCGGGGCTGCGAATAGACATCAGATGGCACAGCCCACGCAAATCTCACTTCGGATCTaGCTGGAAATGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: TPLPPGAANRHQMAQPTQISLRI*LEMMKP Trigger: GGGCTTCATCATTTCCAGCAAGATCCGAAGTGAGAT...TTGCGTGGGCTGTGCCATCTGATGTCTATTCGCAGCCCCGGGAGGAAGGGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS TCA 90 bp | GCACAGGTACCAGGCTGTACCTTTGATCTGGGCCTGGAACCACACTaGGTACATGCCCAAGAGCACCGTTACTGTAGCCATCAGGTAGAC | + |
Preference number: 5 (lower is better) Translates to: AQVPGCTFDLGLEPH*VHAQEHRYCSHQVD Trigger: GTCTACCTGATGGCTACAGTAACGGTGCTCTTGGGCATGTACTCAGTGTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGTACCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | CTGGCACTGAGGACTAATGGCTGTCCAGCTGCTGCCCTAGGATGGAAAGACGGGATCTCACTTCGGATCTaGCTGGAAATGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: LALRTNGCPAAALGWKDGISLRI*LEMMKP Trigger: GGGCTTCATCATTTCCAGCAAGATCCGAAGTGAGAT...CCCGTCTTTCCATCCTAGGGCAGCAGCTGGACAGCCATTAGTCCTCAGTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | CGTTCACAGCACACTGGATGGCTTGAGCCGGAGAGAGGGCTTTGGAAAAGCCAATCTCCACCTTCTTCCTaGGCAAGTAGGAGCTGGAGA | + |
Preference number: 5 (lower is better) Translates to: RSQHTGWLEPERGLWKSQSPPSS*ASRSWR Trigger: TCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAGA...TTGGCTTTTCCAAAGCCCTCTCTCCGGCTCAAGCCATCCAGTGTGCTGTGAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065664.7 ENSMUST00000106655.2 |
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CDS CCA 90 bp | GCCAACAGTGTCAAGGCTCCTATCCAGCTGTGCCAGGACACCAAATaGGACATCTCACTTCGGATCTTGCTGGAAATGATGAAGCCCAAG | + |
Preference number: 5 (lower is better) Translates to: ANSVKAPIQLCQDTK*DISLRILLEMMKPK Trigger: CTTGGGCTTCATCATTTCCAGCAAGATCCGAAGTGAGATGTCCCATTTGGTGTCCTGGCACAGCTGGATAGGAGCCTTGACACTGTTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACATACCAGGCTGTACCTTaGATCTGGGCCTGGAACCAC | + |
Preference number: 5 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTYQAVP*IWAWNH Trigger: GTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGTA...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | ATGAGAGAATTACATCCTGAGCTGCCCACATGGTCCAGAGCTAAGAGGGTATCGTACCAGGCTGTACCTTaGATCTGGGCCTGGAACCAC | + |
Preference number: 5 (lower is better) Translates to: MRELHPELPTWSRAKRVSYQAVP*IWAWNH Trigger: GTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGGTA...CGATACCCTCTTAGCTCTGGACCATGTGGGCAGCTCAGGATGTAATTCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | CTTTCCACAGTTCGTGCGTGGCCCTTGTTTCTTGGTTCAGGAACCAAGTTGACATCTCCACCTTCTTCCTaGGCAAGTAGGAGCTGGAGA | + |
Preference number: 5 (lower is better) Translates to: LSTVRAWPLFLGSGTKLTSPPSS*ASRSWR Trigger: TCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAGA...TGTCAACTTGGTTCCTGAACCAAGAAACAAGGGCCACGCACGAACTGTGGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS GCA 90 bp | TGGAGTCGAATCCGGGTTTTTCGAGAGCAGAAGAAGAACAGGGAGTaGTCAGGTGAGAAGAGTAGAATAGCTTCAGCCATGCAGAGACAG | + |
Preference number: 5 (lower is better) Translates to: WSRIRVFREQKKNRE*SGEKSRIASAMQRQ Trigger: CTGTCTCTGCATGGCTGAAGCTATTCTACTCTTCTCACCTGAGCACTCCCTGTTCTTCTTCTGCTCTCGAAAAACCCGGATTCGACTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | CACCATTACCACCACCTAATACTTCTGTCTCCCACCAAGAGTGAGGTTTCAGGTTCTCCACCTTCTTCCTaGGCAAGTAGGAGCTGGAGA | + |
Preference number: 5 (lower is better) Translates to: HHYHHLILLSPTKSEVSGSPPSS*ASRSWR Trigger: TCTCCAGCTCCTACTTGCCAAGGAAGAAGGTGGAGA...ACCTGAAACCTCACTCTTGGTGGGAGACAGAAGTATTAGGTGGTGGTAATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS-3UTR CAA 90 bp | GGCTTGGTAAGGCTACTGCCTTCAGTTCCTCTGAAGAACTTTAAAGTGACTTCAATCTCACTTCGGATCTaGCTGGAAATGATGAAGCCC | + |
Preference number: 5 (lower is better) Translates to: GLVRLLPSVPLKNFKVTSISLRI*LEMMKP Trigger: GGGCTTCATCATTTCCAGCAAGATCCGAAGTGAGAT...TGAAGTCACTTTAAAGTTCTTCAGAGGAACTGAAGGCAGTAGCCTTACCAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS GCA 72 bp | GGCTGCTCGTGGACAGAGGAGGCAGAGCCCACACAGTaGCTGTCCTCCAGTGGCCAACAGTGTCAAGGCTCC | + |
Preference number: 6 (lower is better) Translates to: GCSWTEEAEPTQ*LSSSGQQCQGS Trigger: GGAGCCTTGACACTGTTGGCCACTGGAGGACAGGCACTGTGTGGGCTCTGCCTCCTCTGTCCACGAGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS CCA 72 bp | TCTCCGCAGCCAGCGGGTCAGTCTCGGCTCCCTCGCTaGAGCGGGAACCAGACCTACCTCCATGGAATGCAT | + |
Preference number: 6 (lower is better) Translates to: SPQPAGQSRLPR*SGNQTYLHGMH Trigger: ATGCATTCCATGGAGGTAGGTCTGGTTCCCGCTCCAGCGAGGGAGCCGAGACTGACCCGCTGGCTGCGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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CDS TCA 72 bp | ACACGTCAGATGGTAGAGCTTGAGGCGAGCCACCCTTaGGACCCGGGCTGCTCGTGGACAGAGGAGGCAGAG | + |
Preference number: 6 (lower is better) Translates to: TRQMVELEASHP*DPGCSWTEEAE Trigger: CTCTGCCTCCTCTGTCCACGAGCAGCCCGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 72 bp | GGTAGACAACCAGGCCACACGTCAGATGGTAGAGCTTaGGGCGAGCCACCCTTGAGACCCGGGCTGCTCGTG | + |
Preference number: 6 (lower is better) Translates to: GRQPGHTSDGRA*GEPPLRPGLLV Trigger: CACGAGCAGCCCGGGTCTCAAGGGTGGCTCGCCTCAAGCTCTACCATCTGACGTGTGGCCTGGTTGTCTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 72 bp | TGGTTCCGGGCCGGGACAGCACAGTCAGAAAGATGGTaGAGCCCAAAGCTATCAGGTGCGCCAAGATCCCAC | + |
Preference number: 6 (lower is better) Translates to: WFRAGTAQSERW*SPKLSGAPRSH Trigger: GTGGGATCTTGGCGCACCTGATAGCTTTGGGCTTCACCATCTTTCTGACTGTGCTGTCCCGGCCCGGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106655.2 |
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CDS TCA 72 bp | TCTTCCTTGGCAAGTAGGAGCTGGAGATCTGGTGCATaGTCACCAGGGCTGGGTACAATGGTAGTCCCAGGC | + |
Preference number: 6 (lower is better) Translates to: SSLASRSWRSGA*SPGLGTMVVPG Trigger: GCCTGGGACTACCATTGTACCCAGCCCTGGTGATCATGCACCAGATCTCCAGCTCCTACTTGCCAAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS TCA 72 bp | CCAGGCTGTACCTTTGATCTGGGCCTGGAACCACACTaGGTACATGCCCAAGAGCACCGTTACTGTAGCCAT | + |
Preference number: 6 (lower is better) Translates to: PGCTFDLGLEPH*VHAQEHRYCSH Trigger: ATGGCTACAGTAACGGTGCTCTTGGGCATGTACTCAGTGTGGTTCCAGGCCCAGATCAAAGGTACAGCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS CAA 90 bp | ATCCAGCTGTGCCAGGACACCAAATGGGACATCTCACTTCGGATCTaGCTGGAAATGATGAAGCCCAAGCCTAGGACAGCACAGAGGATG | + |
Preference number: 6 (lower is better) Translates to: IQLCQDTKWDISLRI*LEMMKPKPRTAQRM Trigger: CATCCTCTGTGCTGTCCTAGGCTTGGGCTTCATCATTTCCAGCAAGATCCGAAGTGAGATGTCCCATTTGGTGTCCTGGCACAGCTGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |
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CDS CCA 72 bp | GTCAAGGCTCCTATCCAGCTGTGCCAGGACACCAAATaGGACATCTCACTTCGGATCTTGCTGGAAATGATG | + |
Preference number: 6 (lower is better) Translates to: VKAPIQLCQDTK*DISLRILLEMM Trigger: CATCATTTCCAGCAAGATCCGAAGTGAGATGTCCCATTTGGTGTCCTGGCACAGCTGGATAGGAGCCTTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065664.7 ENSMUST00000106654.2 ENSMUST00000106655.2 |