Pregenerated sensors for CXXC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046668Ensembl transcript IDs: ENSMUST00000060722.8, ENSMUST00000235161.2, ENSMUST00000235169.2, ENSMUST00000235337.2, ENSMUST00000237291.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGTTTGTCTTCGCCCGAATCCCTTGCCGGAGACCACGCGGGCAGTaGCATTGCACGGAGAGGGCAGCTTTGGGTTCCCGGCCGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: PFVFARIPCRRPRGQ*HCTERAALGSRPSL Trigger: CAGTGACGGCCGGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR GCA 90 bp | GGGCCTGGGTCAGGAACTCCCAGTCCCAGTGGGCTCTGGCCCCTCTaGACACATGGATGGATACAGAGGGGCTTCTACACGGTGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: GPGSGTPSPSGLWPL*THGWIQRGFYTVPP Trigger: TGGTGGCACCGTGTAGAAGCCCCTCTGTATCCATCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACTGGGAGTTCCTGACCCAGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 90 bp | AACATGGTCGGGCCTGGGTCAGGAACTCCCAGTCCCAGTGGGCTCTaGCCCCTCTGCACACATGGATGGATACAGAGGGGCTTCTACACG | + |
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Preference number: 1 (lower is better) Translates to: NMVGPGSGTPSPSGL*PLCTHGWIQRGFYT Trigger: CGTGTAGAAGCCCCTCTGTATCCATCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACTGGGAGTTCCTGACCCAGGCCCGACCATGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 90 bp | GTCAGGAACTCCCAGTCCCAGTGGGCTCTGGCCCCTCTGCACACATaGATGGATACAGAGGGGCTTCTACACGGTGCCACCACCTATTCC | + |
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Preference number: 1 (lower is better) Translates to: VRNSQSQWALAPLHT*MDTEGLLHGATTYS Trigger: GGAATAGGTGGTGGCACCGTGTAGAAGCCCCTCTGTATCCATCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACTGGGAGTTCCTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 90 bp | GGAACTCCCAGTCCCAGTGGGCTCTGGCCCCTCTGCACACATGGATaGATACAGAGGGGCTTCTACACGGTGCCACCACCTATTCCTTTA | + |
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Preference number: 1 (lower is better) Translates to: GTPSPSGLWPLCTHG*IQRGFYTVPPPIPL Trigger: TAAAGGAATAGGTGGTGGCACCGTGTAGAAGCCCCTCTGTATCCATCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACTGGGAGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR GCA 90 bp | GGCCCCTCTGCACACATGGATGGATACAGAGGGGCTTCTACACGGTaGCACCACCTATTCCTTTATAAACGTGAATGGATTCTCCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GPSAHMDGYRGASTR*HHLFLYKREWILQA Trigger: TGCCTGGAGAATCCATTCACGTTTATAAAGGAATAGGTGGTGGCACCGTGTAGAAGCCCCTCTGTATCCATCCATGTGTGCAGAGGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 90 bp | GGGGCTTCTACACGGTGCCACCACCTATTCCTTTATAAACGTGAATaGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAA | + |
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Preference number: 1 (lower is better) Translates to: GASTRCHHLFLYKRE*ILQANYALFHGWKE Trigger: TTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAGGAATAGGTGGTGGCACCGTGTAGAAGCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 90 bp | TTATTTTCTCTAAGGGAAGTAGCCAGGATCAGAAATACTGAGATGTaGGCTCTCCAGATCTCAGTGGATCAACAAATGAATAGAATTTTC | + |
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Preference number: 1 (lower is better) Translates to: LFSLREVARIRNTEM*ALQISVDQQMNRIF Trigger: GAAAATTCTATTCATTTGTTGATCCACTGAGATCTGGAGAGCCCACATCTCAGTATTTCTGATCCTGGCTACTTCCCTTAGAGAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CAA 90 bp | TTGGTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTaGCCGGAGACCACGCGGGCAGTGACATTGCACGGAGAGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: LVLKTGASVCLRPNP*PETTRAVTLHGEGS Trigger: GCTGCCCTCTCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGCTGCGAGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTACAGGGGACGATGGGGTaGAACATGGTCGGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: LLLRARLRKEGLFSLREVQGTMG*NMVGPG Trigger: CCCAGGCCCGACCATGTTGCACCCCATCGTCCCCTG...TACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCTCGCAGCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTAGCCAGGATCAGAGTCCCAGTGGGCTCTaGCCCCTCTGCACACATGGA | + |
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Preference number: 2 (lower is better) Translates to: SKAEKRGLIFSKGSSQDQSPSGL*PLCTHG Trigger: TCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACT...CTGATCCTGGCTACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR GCA 90 bp | TTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACATTGACTTCGCCCGAATCCCTTaGCGGAGACCACGCGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LHSLHKNSISRTDNIDIDFARIP*RRPRGQ Trigger: CTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAA...GTCAATGTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR TCA 90 bp | TGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAAGACCACGCGGGCAGTaGCATTGCACGGAGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: WILQANYALFHGWKESKERPRGQ*HCTERA Trigger: TGCCCTCTCCGTGCAATGTCACTGCCCGCGTGGTCT...TTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCGAGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTAGCCAGGTCTCCAGGCAAACTATaGACTATTTCATGGTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRARLRKEGLFSLREVARSPGKL*TISWLE Trigger: TTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGA...CCTGGCTACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCTCGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGTTGATGTTCGGTTCTAAAGACGGGTaGATCCGTTTGTCTTCGCCC | + |
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Preference number: 2 (lower is better) Translates to: KSRYFIDSSLPLLLLLMFGSKDG*IRLSSP Trigger: GGGCGAAGACAAACGGATGCACCCGTCTTTAGAACC...GAACATCAACAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CAA 90 bp | ATTGACATTGACATTGACACAGGAAGGAGACTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IDIDIDTGRRLIVHS*PRKSRYFIDSSLPL Trigger: GAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCTCCTTCCTGTGTCAATGTCAATGTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCTGCGAGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTACTTTATAAACGTGAATaGATTCTCCAGGCAAACTAT | + |
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Preference number: 2 (lower is better) Translates to: LLLRARLRKEGLFSLREVLYKRE*ILQANY Trigger: ATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAG...TACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCTCGCAGCAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR TCA 72 bp | TTCGCCCGAATCCCTTGCCGGAGACCACGCGGGCAGTaGCATTGCACGGAGAGGGCAGCTTTGGGTTCCCGG | + |
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Preference number: 3 (lower is better) Translates to: FARIPCRRPRGQ*HCTERAALGSR Trigger: CCGGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 72 bp | GGGCCTGGGTCAGGAACTCCCAGTCCCAGTGGGCTCTaGCCCCTCTGCACACATGGATGGATACAGAGGGGC | + |
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Preference number: 3 (lower is better) Translates to: GPGSGTPSPSGL*PLCTHGWIQRG Trigger: GCCCCTCTGTATCCATCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACTGGGAGTTCCTGACCCAGGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 72 bp | CAATCAGGGGACGATGGGGTGCAACATGGTCGGGCCTaGGTCAGGAACTCCCAGTCCCAGTGGGCTCTGGCC | + |
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Preference number: 3 (lower is better) Translates to: QSGDDGVQHGRA*VRNSQSQWALA Trigger: GGCCAGAGCCCACTGGGACTGGGAGTTCCTGACCCAGGCCCGACCATGTTGCACCCCATCGTCCCCTGATTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 72 bp | CATGGTCGGGCCTGGGTCAGGAACTCCCAGTCCCAGTaGGCTCTGGCCCCTCTGCACACATGGATGGATACA | + |
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Preference number: 3 (lower is better) Translates to: HGRAWVRNSQSQ*ALAPLHTWMDT Trigger: TGTATCCATCCATGTGTGCAGAGGGGCCAGAGCCCACTGGGACTGGGAGTTCCTGACCCAGGCCCGACCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CAA 90 bp | AGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTACGGAGAGGGCAGCTTaGGGTTCCCGGCCGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: RLIVHSLPRKSRYFIDSSTERAA*GSRPSL Trigger: CAGTGACGGCCGGGAACCCAAAGCTGCCCTCTCCGT...AGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CAA 90 bp | AGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTGACGGGTGCATCCGTTaGTCTTCGCCCGAATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: RLIVHSLPRKSRYFIDSSDGCIR*SSPESL Trigger: AAGGGATTCGGGCGAAGACAAACGGATGCACCCGTC...AGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTATAAACGTGAATGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGACGCGGGCAGTGACATaGCACGGAGAGGGCAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LYKREWILQANYALFHGWTRAVT*HGEGSF Trigger: AAAGCTGCCCTCTCCGTGCAATGTCACTGCCCGCGT...CCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 72 bp | CTAAGGGAAGTAGCCAGGATCAGAAATACTGAGATGTaGGCTCTCCAGATCTCAGTGGATCAACAAATGAAT | + |
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Preference number: 3 (lower is better) Translates to: LREVARIRNTEM*ALQISVDQQMN Trigger: ATTCATTTGTTGATCCACTGAGATCTGGAGAGCCCACATCTCAGTATTTCTGATCCTGGCTACTTCCCTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTAGCCAGGATCAGTGTGAGAGAATATTTTaGGTTCTAAAGACGGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: SKAEKRGLIFSKGSSQDQCERIF*VLKTGA Trigger: TGCACCCGTCTTTAGAACCAAAAATATTCTCTCACA...CTGATCCTGGCTACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CAA 90 bp | GGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAGCCCGCACAGACAACATaGACATTGACATTGACACAG | + |
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Preference number: 3 (lower is better) Translates to: GFSRQTMHYFMVGKNQRKPAQTT*TLTLTQ Trigger: CTGTGTCAATGTCAATGTCAATGTTGTCTGTGCGGG...CTTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CCA 72 bp | ACACGGTGCCACCACCTATTCCTTTATAAACGTGAATaGATTCTCCAGGCAAACTATGCACTATTTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: TRCHHLFLYKRE*ILQANYALFHG Trigger: ACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAGGAATAGGTGGTGGCACCGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR-3UTR CAA 90 bp | GGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAGCAGACAACATTGACATaGACATTGACACAGGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GFSRQTMHYFMVGKNQRKQTTLT*TLTQEG Trigger: TCCTTCCTGTGTCAATGTCAATGTCAATGTTGTCTG...CTTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR TCA 72 bp | AGATGTGGGCTCTCCAGATCTCAGTGGATCAACAAATaGATAGAATTTTCATCTCTCCAAAATCCATCACTG | + |
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Preference number: 3 (lower is better) Translates to: RCGLSRSQWINK*IEFSSLQNPSL Trigger: CAGTGATGGATTTTGGAGAGATGAAAATTCTATTCATTTGTTGATCCACTGAGATCTGGAGAGCCCACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CAA 72 bp | CCGAATCCCTTGCCGGAGACCACGCGGGCAGTGACATaGCACGGAGAGGGCAGCTTTGGGTTCCCGGCCGTC | + |
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Preference number: 4 (lower is better) Translates to: PNPLPETTRAVT*HGEGSFGFPAV Trigger: GACGGCCGGGAACCCAAAGCTGCCCTCTCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | TGTCTTCGCCCGAATCCCTTGCCGGAGACCACGCGGGCAGTGACATTGCACGGAGTTGCTTTTGTCCACTaGCATGGCCGCAGCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: CLRPNPLPETTRAVTLHGVAFVH*HGRSQV Trigger: GACCTGGCTGCGGCCATGGCAGTGGACAAAAGCAAC...TCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CAA 72 bp | AAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTaGCCGGAGACCACGCGGGCAGTGACATTGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: KTGASVCLRPNP*PETTRAVTLHG Trigger: TCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCCGGAGACCGTGGACTGTGCAAACTaGTGCAGCGTCAGCTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VLKTGASVCLRPNPLPETVDCAN*CSVSCP Trigger: GGGACAGCTGACGCTGCAGCAGTTTGCACAGTCCAC...GGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | GTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCCGGAGACCTGCCACTGCTGCTATTaGTGTTACTGCTGCTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: VLKTGASVCLRPNPLPETCHCCY*CYCCCY Trigger: GTAGCAGCAGCAGTAACACCAATAGCAGCAGTGGCA...GGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | GGTCTCCTAAAACAATACAAACAGCATGTTCCTCAGCAGGGAGCTGGCCACGGGCCTTGCTCAGCAGGCTaGCCACAGCACCACTTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GLLKQYKQHVPQQGAGHGPCSAG*PQHHFC Trigger: ACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGG...CCCGTGGCCAGCTCCCTGCTGAGGAACATGCTGTTTGTATTGTTTTAGGAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGAGTCGGACTGGCCATTaGGGGCTTCGGCGCCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LPRKSRYFIDSSLPLLLLSRTGH*GLRRRP Trigger: TGGCCGGCGCCGAAGCCCTCAATGGCCAGTCCGACT...CAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | CTGCGAGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTAGCCAGGCAGGAACACGCCAGCTaGGGTCATGATGAAGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LRARLRKEGLFSLREVARQEHAS*GHDEEA Trigger: GGCCTCTTCATCATGACCCCAGCTGGCGTGTTCCTG...CCTGGCTACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCTCGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| 3UTR CAA 72 bp | GAGAATATTTTTGGTTCTAAAGACGGGTGCATCCGTTaGTCTTCGCCCGAATCCCTTGCCGGAGACCACGCG | + |
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Preference number: 4 (lower is better) Translates to: ENIFGSKDGCIR*SSPESLAGDHA Trigger: CGCGTGGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAACCAAAAATATTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | TTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGGGCTGCGGCTGCCGCTaGCTTGTCAGCAGACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LPRKSRYFIDSSLPLLLLGCGCR*LVSRLH Trigger: GTGGAGTCTGCTGACAAGGCAGCGGCAGCCGCAGCC...CAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGAGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATGGCAGGGCGCACACATaGCGCAGCGTTTCCGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GRRLIVHSLPRKSRYFIDGRAHT*RSVSAS Trigger: AGAAGCGGAAACGCTGCGGCATGTGTGCGCCCTGCC...ATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCTCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | GTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGTTGATGTTCTTCTGCCACCGGCGTCCTaGGAGCCACCGCCGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VSVLYRFVFTSLVVVDVLLPPAS*EPPPRL Trigger: GAGCCTCGGCGGTGGCTCCCAGGACGCCGGTGGCAG...AAGAACATCAACAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | GATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAGTTGCACTGCTCACAGTTaGTGCGCCGCCGGCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: DSPGKLCTISWLERIKGSCTAHS*CAAGRA Trigger: CGCCCTGCCGGCGGCGCATCAACTGTGAGCAGTGCA...ACTTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | AGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTGGCCCTCTCTGCCTTaGTCAGCAGGCTGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: RLIVHSLPRKSRYFIDSSWPSLP*SAGWPQ Trigger: CTGTGGCCAGCCTGCTGAGCAAGGCAGAGAGGGCCA...AGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | CTGCGAGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTAGCCAGGCATCTCTGTGGACTGTaGAAACTGCTGCAGCGTCAG | + |
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Preference number: 4 (lower is better) Translates to: LRARLRKEGLFSLREVARHLCGL*KLLQRQ Trigger: CTGACGCTGCAGCAGTTTGCACAGTCCACAGAGATG...CCTGGCTACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCTCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | AGCAAGGCTGAGAAAAGAGGGCTTATTTTCTCTAAGGGAAGTAGCCAGGATCAGGCCAGCCATGTGCAGTaGACTCTCAGCCAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: SKAEKRGLIFSKGSSQDQASHVQ*TLSQEH Trigger: GTGTTCCTGGCTGAGAGTGCACTGCACATGGCTGGC...CTGATCCTGGCTACTTCCCTTAGAGAAAATAAGCCCTCTTTTCTCAGCCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | AGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTCCGCTTCTTCTTGCCTaGGCTGATGGCGGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLIVHSLPRKSRYFIDSSPLLLA*ADGGSQ Trigger: CTGGCTTCCGCCATCAGCTCAGGCAAGAAGAAGCGG...AGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GAAAATTTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACGCCAGGCCAGCCATGTaGAGTGCACTCTCAGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENLHSLHKNSISRTDNIDARPAM*SALSAR Trigger: CCTGGCTGAGAGTGCACTGCACATGGCTGGCCTGGC...GTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAAATTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GAAAATTTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACGAAGCCAGCTCTCCCTaGATGGGGTACTCGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ENLHSLHKNSISRTDNIDEASSP*MGYSAR Trigger: CCTGGCCGAGTACCCCATGCAGGGAGAGCTGGCTTC...GTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAAATTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | TGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAGCCGCAGCCAGGTCATaGCCATTGGCCAATAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WILQANYALFHGWKESKEAAARS*PLANRE Trigger: CTCCCTATTGGCCAATGGTCATGACCTGGCTGCGGC...TTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | AAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGTTGATGTTCTACTGCTGCTGCTACTaGCACCGGCGTCCTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSRYFIDSSLPLLLLLMFYCCCY*HRRPGS Trigger: GCTCCCAGGACGCCGGTGGCAGTAGCAGCAGCAGTA...GAACATCAACAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | AGGAGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTGCTATTGGTGTTACTaGTGCTGCTACTGCCACCGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLIVHSLPRKSRYFIDSCYWCY*CCYCHR Trigger: CCGGTGGCAGTAGCAGCAGCAGTAACACCAATAGCA...CGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | TTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACATTGACGGCCTCACTCATCAGTaGCAGGTGTTCCTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLHKNSISRTDNIDIDGLTHQ*QVFLHH Trigger: GTGGTGCAGGAACACCTGCCACTGATGAGTGAGGCC...GTCAATGTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAGGACTGTGCAAACTGCTaGAGCGTCAGCTGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GFSRQTMHYFMVGKNQRKDCANC*SVSCPS Trigger: TGAGGGACAGCTGACGCTGCAGCAGTTTGCACAGTC...CTTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | TTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACATTGACAGTGGCAGGTGTTCCTaGACCACGCGCTTTAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLHKNSISRTDNIDIDSGRCS*TTRFSI Trigger: GATGCTAAAGCGCGTGGTGCAGGAACACCTGCCACT...GTCAATGTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAAGCTGCCTTTTGGCCACTaGCACTGCTGCTATTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSRQTMHYFMVGKNQRKLPFGH*HCCYWC Trigger: ACACCAATAGCAGCAGTGGCAGTGGCCAAAAGGCAG...CTTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | TTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACATTGACCATGATGAAGAGGCCTaGATTGATGGGGAAAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLHKNSISRTDNIDIDHDEEA*IDGESA Trigger: GGCGCTTTCCCCATCAATCCAGGCCTCTTCATCATG...GTCAATGTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGTTGATGTTCTTGGCCACTGCCACTGCTaGTATTGGTGTTACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVLYRFVFTSLVVVDVLGHCHC*YWCYCC Trigger: GCAGCAGTAACACCAATAGCAGCAGTGGCAGTGGCC...AAGAACATCAACAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
||
| 3UTR CAA 72 bp | GACATTGACACAGGAAGGAGACTGATTGTCCATTCTTaGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DIDTGRRLIVHS*PRKSRYFIDSS Trigger: AGACGAATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCTCCTTCCTGTGTCAATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGACCACTTTTGTGCTTTaGGGTAGGGTTGCTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRKSRYFIDSSLPLLLLTTFVL*GRVAFV Trigger: GACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGT...CAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | TTGCCCAGGAAGTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGCTGAATTTGCAAATCTaGTGGCCAGTCTTTCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPRKSRYFIDSSLPLLLLLNLQI*WPVFRF Trigger: GAACCGAAAGACTGGCCATCAGATTTGCAAATTCAG...CAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGACTTCCTGGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CCA 90 bp | GAAAATTTACATTCTCTACACAAAAACAGCATCTCCCGCACAGACAACATTGACGCTTTAGCATCTCTGTaGACTGTGCAAACTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENLHSLHKNSISRTDNIDALASL*TVQTAA Trigger: TGCAGCAGTTTGCACAGTCCACAGAGATGCTAAAGC...GTCAATGTTGTCTGTGCGGGAGATGCTGTTTTTGTGTAGAGAATGTAAATTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR GCA 90 bp | GTCTCGGTACTTTATAGATTCGTCTTTACCTCTCTTGTTGTTGTTGATGTTCTTACAGCACCACTTTTGTaGTTTGAGGTAGGGTTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVLYRFVFTSLVVVDVLTAPLL*FEVGLL Trigger: AAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGT...AAGAACATCAACAACAACAAGAGAGGTAAAGACGAATCTATAAAGTACCGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR TCA 90 bp | AACGTGAATGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATGTTCTTCACACTTTCTaGATTTGCAAATCTGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: NVNGFSRQTMHYFMVGKNVLHTF*ICKSDG Trigger: GCCATCAGATTTGCAAATTCAGAAAGTGTGAAGAAC...ATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCATTCACGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS CCA 90 bp | GAGGGGTTCACTGATGATACCGCTCTTGTTCCGACGCTCAGGGGGTaGGGCATCGTCTGCCACGGAGGTCGGCGCCGTGGTGGCGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: EGFTDDTALVPTLRG*GIVCHGGRRRGGGH Trigger: GTGGCCGCCACCACGGCGCCGACCTCCGTGGCAGACGATGCCCCACCCCCTGAGCGTCGGAACAAGAGCGGTATCATCAGTGAACCCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 90 bp | GATGATACCGCTCTTGTTCCGACGCTCAGGGGGTGGGGCATCGTCTaGCACGGAGGTCGGCGCCGTGGTGGCGGCCACCGCGGTACTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DDTALVPTLRGWGIV*HGGRRRGGGHRGTF Trigger: AAAAGTACCGCGGTGGCCGCCACCACGGCGCCGACCTCCGTGGCAGACGATGCCCCACCCCCTGAGCGTCGGAACAAGAGCGGTATCATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS TCA 90 bp | AGGGCGCACACATGCCGCAGCGTTTCCGCTTCTTCTTGCCTGAGCTaGTGGCGGAAGCCAGCTCTCCCTGCATGGGGTACTCGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RAHTCRSVSASSCLS*WRKPALPAWGTRPG Trigger: GCCTGGCCGAGTACCCCATGCAGGGAGAGCTGGCTTCCGCCATCAGCTCAGGCAAGAAGAAGCGGAAACGCTGCGGCATGTGTGCGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 90 bp | CTCCTGCCTTTTGGCCACTGCCACTGCTGCTATTGGTGTTACTGCTaGTGCTACTGCCACCGGCGTCCTGGGAGCCACCGCCGAGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLPFGHCHCCYWCYC*CYCHRRPGSHRRGS Trigger: CGAGCCTCGGCGGTGGCTCCCAGGACGCCGGTGGCAGTAGCAGCAGCAGTAACACCAATAGCAGCAGTGGCAGTGGCCAAAAGGCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 90 bp | GAAGCCAGCTCTCCCTGCATGGGGTACTCGGCCAGGCCAGCCATGTaGAGTGCACTCTCAGCCAGGAACACGCCAGCTGGGGTCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: EASSPCMGYSARPAM*SALSARNTPAGVMM Trigger: CATCATGACCCCAGCTGGCGTGTTCCTGGCTGAGAGTGCACTGCACATGGCTGGCCTGGCCGAGTACCCCATGCAGGGAGAGCTGGCTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CAA 90 bp | TGCAACATGGTCGGGCCTGGGTCAGGAACTCCCAGTCCCAGTGGGCTCTGGCCCCTGATGATACCGCTCTaGTTCCGACGCTCAGGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CNMVGPGSGTPSPSGLWPLMIPL*FRRSGG Trigger: ACCCCCTGAGCGTCGGAACAAGAGCGGTATCATCAG...GGGCCAGAGCCCACTGGGACTGGGAGTTCCTGACCCAGGCCCGACCATGTTGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 90 bp | CAGCTCTCCCTGCATGGGGTACTCGGCCAGGCCAGCCATGTGCAGTaGACTCTCAGCCAGGAACACGCCAGCTGGGGTCATGATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLSLHGVLGQASHVQ*TLSQEHASWGHDEE Trigger: CTCTTCATCATGACCCCAGCTGGCGTGTTCCTGGCTGAGAGTGCACTGCACATGGCTGGCCTGGCCGAGTACCCCATGCAGGGAGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 90 bp | CGGCGCCGTGGTGGCGGCCACCGCGGTACTTTTGTCTGTTCCTCCTaGCTTTTGGCCACTGCCACTGCTGCTATTGGTGTTACTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRGGGHRGTFVCSS*LLATATAAIGVTAA Trigger: AGCAGCAGTAACACCAATAGCAGCAGTGGCAGTGGCCAAAAGGCAGGAGGAACAGACAAAAGTACCGCGGTGGCCGCCACCACGGCGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 90 bp | CCTTGTCAGCAGACTCCACCCCCATCATGCTTCCGCCGCCACCACTaGTACCAAAGGAAGAGTAGTGAGAGAGTGGTCGGGAGCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PCQQTPPPSCFRRHH*YQRKSSERVVGSAA Trigger: TGCGGCGCTCCCGACCACTCTCTCACTACTCTTCCTTTGGTAGCAGTGGTGGCGGCGGAAGCATGATGGGGGTGGAGTCTGCTGACAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 90 bp | AGGCTGCGGCTGCCGCTGCCTTGTCAGCAGACTCCACCCCCATCATaGTTCCGCCGCCACCACTGCTACCAAAGGAAGAGTAGTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLRLPLPCQQTPPPS*FRRHHCYQRKSSER Trigger: TCTCTCACTACTCTTCCTTTGGTAGCAGTGGTGGCGGCGGAAGCATGATGGGGGTGGAGTCTGCTGACAAGGCAGCGGCAGCCGCAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 90 bp | TTCCGCTTCTTCTTGCCTGAGCTGATGGCGGAAGCCAGCTCTCCCTaGATGGGGTACTCGGCCAGGCCAGCCATGTGCAGTGCACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FRFFLPELMAEASSP*MGYSARPAMCSALS Trigger: TGAGAGTGCACTGCACATGGCTGGCCTGGCCGAGTACCCCATGCAGGGAGAGCTGGCTTCCGCCATCAGCTCAGGCAAGAAGAAGCGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS CCA 90 bp | CAGGCCAGCCATGTGCAGTGCACTCTCAGCCAGGAACACGCCAGCTaGGGTCATGATGAAGAGGCCTGGATTGATGGGGAAAGCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QASHVQCTLSQEHAS*GHDEEAWIDGESAQ Trigger: CTGGGCGCTTTCCCCATCAATCCAGGCCTCTTCATCATGACCCCAGCTGGCGTGTTCCTGGCTGAGAGTGCACTGCACATGGCTGGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 90 bp | TCCTGCACCACGCGCTTTAGCATCTCTGTGGACTGTGCAAACTGCTaGAGCGTCAGCTGTCCCTCAGCTGCCAGCTCTGTGGCCCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SCTTRFSISVDCANC*SVSCPSAASSVALS Trigger: AGAGAGGGCCACAGAGCTGGCAGCTGAGGGACAGCTGACGCTGCAGCAGTTTGCACAGTCCACAGAGATGCTAAAGCGCGTGGTGCAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060722.8 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS CCA 90 bp | GCTTCCGCCGCCACCACTGCTACCAAAGGAAGAGTAGTGAGAGAGTaGTCGGGAGCGCCGCAGGCTCTTGTTGAGGGGTTCACTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: ASAATTATKGRVVRE*SGAPQALVEGFTDD Trigger: ATCATCAGTGAACCCCTCAACAAGAGCCTGCGGCGCTCCCGACCACTCTCTCACTACTCTTCCTTTGGTAGCAGTGGTGGCGGCGGAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS-3UTR CAA 90 bp | TGTCTTCGCCCGAATCCCTTGCCGGAGACCACGCGGGCAGTGACATTGCACGGACTGCCACTGCTGCTATaGGTGTTACTGCTGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: CLRPNPLPETTRAVTLHGLPLLL*VLLLLL Trigger: TAGCAGCAGCAGTAACACCAATAGCAGCAGTGGCAG...TCCGTGCAATGTCACTGCCCGCGTGGTCTCCGGCAAGGGATTCGGGCGAAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS CCA 90 bp | TCATCAGTGGCAGGTGTTCCTGCACCACGCGCTTTAGCATCTCTGTaGACTGTGCAAACTGCTGCAGCGTCAGCTGTCCCTCAGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSVAGVPAPRALASL*TVQTAAASAVPQLP Trigger: TGGCAGCTGAGGGACAGCTGACGCTGCAGCAGTTTGCACAGTCCACAGAGATGCTAAAGCGCGTGGTGCAGGAACACCTGCCACTGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060722.8 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS-3UTR CAA 90 bp | GTTCTAAAGACGGGTGCATCCGTTTGTCTTCGCCCGAATCCCTTGCCGGAGACCGCCACAGCACCACTTTaGTGCTTTGAGGTAGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VLKTGASVCLRPNPLPETATAPL*CFEVGL Trigger: CAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGC...GGTCTCCGGCAAGGGATTCGGGCGAAGACAAACGGATGCACCCGTCTTTAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CAA 90 bp | GGAAGGAGACTGATTGTCCATTCTTTGCCCAGGAAGTCTCGGTACTTTATAGATCTGCACTGCTCACAGTaGATGCGCCGCCGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRRLIVHSLPRKSRYFIDLHCSQ*MRRRQG Trigger: GCCCTGCCGGCGGCGCATCAACTGTGAGCAGTGCAG...ATCTATAAAGTACCGAGACTTCCTGGGCAAAGAATGGACAATCAGTCTCCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CAA 90 bp | GGTGCCACCACCTATTCCTTTATAAACGTGAATGGATTCTCCAGGCAAACTATGTGTTCCTCCTGCCTTTaGGCCACTGCCACTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GATTYSFINVNGFSRQTMCSSCL*ATATAA Trigger: AGCAGCAGTGGCAGTGGCCAAAAGGCAGGAGGAACA...CATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAGGAATAGGTGGTGGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CAA 90 bp | GGTGCCACCACCTATTCCTTTATAAACGTGAATGGATTCTCCAGGCAAACTATGGCCACCGCGGTACTTTaGTCTGTTCCTCCTGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GATTYSFINVNGFSRQTMATAVL*SVPPAF Trigger: AAAGGCAGGAGGAACAGACAAAAGTACCGCGGTGGC...CATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAGGAATAGGTGGTGGCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS-3UTR CAA 90 bp | CTTTATAAACGTGAATGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGATGAAGAGGCCTGGATaGATGGGGAAAGCGCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LYKREWILQANYALFHGWMKRPG*MGKAPR Trigger: TCTGGGCGCTTTCCCCATCAATCCAGGCCTCTTCAT...CCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCATTCACGTTTATAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
||
| CDS-3UTR CAA 90 bp | TGGATTCTCCAGGCAAACTATGCACTATTTCATGGTTGGAAAGAATCAAAGGAACGTTTCCGCTTCTTCTaGCCTGAGCTGATGGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WILQANYALFHGWKESKERFRFF*PELMAE Trigger: TTCCGCCATCAGCTCAGGCAAGAAGAAGCGGAAACG...TTCCTTTGATTCTTTCCAACCATGAAATAGTGCATAGTTTGCCTGGAGAATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 72 bp | GCTCTTGTTCCGACGCTCAGGGGGTGGGGCATCGTCTaGCACGGAGGTCGGCGCCGTGGTGGCGGCCACCGC | + |
|
Preference number: 6 (lower is better) Translates to: ALVPTLRGWGIV*HGGRRRGGGHR Trigger: GCGGTGGCCGCCACCACGGCGCCGACCTCCGTGGCAGACGATGCCCCACCCCCTGAGCGTCGGAACAAGAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS TCA 72 bp | GGAAAGCGCCCAGATAGGGGAAGTCGGACTGGCCATTaGGGGCTTCGGCGCCGGCCACAGCCTCCATGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GKRPDRGSRTGH*GLRRRPQPPCQ Trigger: CTGACATGGAGGCTGTGGCCGGCGCCGAAGCCCTCAATGGCCAGTCCGACTTCCCCTATCTGGGCGCTTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060722.8 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS CCA 72 bp | ACTGATGATACCGCTCTTGTTCCGACGCTCAGGGGGTaGGGCATCGTCTGCCACGGAGGTCGGCGCCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TDDTALVPTLRG*GIVCHGGRRRG Trigger: ACCACGGCGCCGACCTCCGTGGCAGACGATGCCCCACCCCCTGAGCGTCGGAACAAGAGCGGTATCATCAGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS CAA 72 bp | GAGGTCGGCGCCGTGGTGGCGGCCACCGCGGTACTTTaGTCTGTTCCTCCTGCCTTTTGGCCACTGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: EVGAVVAATAVL*SVPPAFWPLPL Trigger: CAGTGGCAGTGGCCAAAAGGCAGGAGGAACAGACAAAAGTACCGCGGTGGCCGCCACCACGGCGCCGACCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | CTGCATGGGGTACTCGGCCAGGCCAGCCATGTGCAGTaGACTCTCAGCCAGGAACACGCCAGCTGGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LHGVLGQASHVQ*TLSQEHASWGH Trigger: ATGACCCCAGCTGGCGTGTTCCTGGCTGAGAGTGCACTGCACATGGCTGGCCTGGCCGAGTACCCCATGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS CAA 72 bp | CAGGGCGCACACATGCCGCAGCGTTTCCGCTTCTTCTaGCCTGAGCTGATGGCGGAAGCCAGCTCTCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QGAHMPQRFRFF*PELMAEASSPC Trigger: GCAGGGAGAGCTGGCTTCCGCCATCAGCTCAGGCAAGAAGAAGCGGAAACGCTGCGGCATGTGTGCGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS CAA 90 bp | TCTGCCACGGAGGTCGGCGCCGTGGTGGCGGCCACCGCGGTACTTTaGTCTGTTCCTCCTGCCTTTTGGCCACTGCCACTGCTGCTATTG | + |
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Preference number: 6 (lower is better) Translates to: SATEVGAVVAATAVL*SVPPAFWPLPLLLL Trigger: CAATAGCAGCAGTGGCAGTGGCCAAAAGGCAGGAGGAACAGACAAAAGTACCGCGGTGGCCGCCACCACGGCGCCGACCTCCGTGGCAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | TTTGGCCACTGCCACTGCTGCTATTGGTGTTACTGCTaGTGCTACTGCCACCGGCGTCCTGGGAGCCACCGC | + |
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Preference number: 6 (lower is better) Translates to: FGHCHCCYWCYC*CYCHRRPGSHR Trigger: GCGGTGGCTCCCAGGACGCCGGTGGCAGTAGCAGCAGCAGTAACACCAATAGCAGCAGTGGCAGTGGCCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | GTCCCTCAGCTGCCAGCTCTGTGGCCCTCTCTGCCTTaGTCAGCAGGCTGGCCACAGCACCACTTTTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: VPQLPALWPSLP*SAGWPQHHFCA Trigger: AGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGAGGGCCACAGAGCTGGCAGCTGAGGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000060722.8 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | CAGCTGTCCCTCAGCTGCCAGCTCTGTGGCCCTCTCTaGCTTGCTCAGCAGGCTGGCCACAGCACCACTTTT | + |
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Preference number: 6 (lower is better) Translates to: QLSLSCQLCGPL*LAQQAGHSTTF Trigger: AAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGCAGAGAGGGCCACAGAGCTGGCAGCTGAGGGACAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060722.8 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | TTCTTGCCTGAGCTGATGGCGGAAGCCAGCTCTCCCTaGATGGGGTACTCGGCCAGGCCAGCCATGTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: FLPELMAEASSP*MGYSARPAMCS Trigger: ACTGCACATGGCTGGCCTGGCCGAGTACCCCATGCAGGGAGAGCTGGCTTCCGCCATCAGCTCAGGCAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS TCA 72 bp | ACATGCCGCAGCGTTTCCGCTTCTTCTTGCCTGAGCTaGTGGCGGAAGCCAGCTCTCCCTGCATGGGGTACT | + |
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Preference number: 6 (lower is better) Translates to: TCRSVSASSCLS*WRKPALPAWGT Trigger: AGTACCCCATGCAGGGAGAGCTGGCTTCCGCCATCAGCTCAGGCAAGAAGAAGCGGAAACGCTGCGGCATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 72 bp | CAGACTCCACCCCCATCATGCTTCCGCCGCCACCACTaGTACCAAAGGAAGAGTAGTGAGAGAGTGGTCGGG | + |
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Preference number: 6 (lower is better) Translates to: QTPPPSCFRRHH*YQRKSSERVVG Trigger: CCCGACCACTCTCTCACTACTCTTCCTTTGGTAGCAGTGGTGGCGGCGGAAGCATGATGGGGGTGGAGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS CCA 72 bp | GCCACCACTGCTACCAAAGGAAGAGTAGTGAGAGAGTaGTCGGGAGCGCCGCAGGCTCTTGTTGAGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: ATTATKGRVVRE*SGAPQALVEGF Trigger: GAACCCCTCAACAAGAGCCTGCGGCGCTCCCGACCACTCTCTCACTACTCTTCCTTTGGTAGCAGTGGTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS CAA 90 bp | CGTGGTGGCGGCCACCGCGGTACTTTTGTCTGTTCCTCCTGCCTTTaGGCCACTGCCACTGCTGCTATTGGTGTTACTGCTGCTGCTACT | + |
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Preference number: 6 (lower is better) Translates to: RGGGHRGTFVCSSCL*ATATAAIGVTAAAT Trigger: AGTAGCAGCAGCAGTAACACCAATAGCAGCAGTGGCAGTGGCCAAAAGGCAGGAGGAACAGACAAAAGTACCGCGGTGGCCGCCACCACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | GGTGGCGGCCACCGCGGTACTTTTGTCTGTTCCTCCTaGCTTTTGGCCACTGCCACTGCTGCTATTGGTGTT | + |
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Preference number: 6 (lower is better) Translates to: GGGHRGTFVCSS*LLATATAAIGV Trigger: AACACCAATAGCAGCAGTGGCAGTGGCCAAAAGGCAGGAGGAACAGACAAAAGTACCGCGGTGGCCGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | ACGCGCTTTAGCATCTCTGTGGACTGTGCAAACTGCTaGAGCGTCAGCTGTCCCTCAGCTGCCAGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: TRFSISVDCANC*SVSCPSAASSV Trigger: CACAGAGCTGGCAGCTGAGGGACAGCTGACGCTGCAGCAGTTTGCACAGTCCACAGAGATGCTAAAGCGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060722.8 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS GCA 72 bp | ACCACGCGCTTTAGCATCTCTGTGGACTGTGCAAACTaGTGCAGCGTCAGCTGTCCCTCAGCTGCCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: TTRFSISVDCAN*CSVSCPSAASS Trigger: AGAGCTGGCAGCTGAGGGACAGCTGACGCTGCAGCAGTTTGCACAGTCCACAGAGATGCTAAAGCGCGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000060722.8 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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| CDS CCA 72 bp | CATGTGCAGTGCACTCTCAGCCAGGAACACGCCAGCTaGGGTCATGATGAAGAGGCCTGGATTGATGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: HVQCTLSQEHAS*GHDEEAWIDGE Trigger: TTCCCCATCAATCCAGGCCTCTTCATCATGACCCCAGCTGGCGTGTTCCTGGCTGAGAGTGCACTGCACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060722.8 |
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| CDS GCA 72 bp | GCCTTGCTCAGCAGGCTGGCCACAGCACCACTTTTGTaGTTTGAGGTAGGGTTGCTTTTGTCCACTGCCATG | + |
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Preference number: 6 (lower is better) Translates to: ALLSRLATAPLL*FEVGLLLSTAM Trigger: CATGGCAGTGGACAAAAGCAACCCTACCTCAAAGCACAAAAGTGGTGCTGTGGCCAGCCTGCTGAGCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000060722.8 ENSMUST00000235161.2 ENSMUST00000235169.2 ENSMUST00000235337.2 ENSMUST00000237291.2 |
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