Pregenerated sensors for CXXC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044365Ensembl transcript IDs: ENSMUST00000166288.2, ENSMUST00000181904.3
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACGGGAGGACACTGGGAACGGAGTACACTTGGTGGCCCATGTCCTaGAATATCTATTTGTCAATTGTGGAACGGAATCCCTCTGAACAC | + |
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Preference number: 1 (lower is better) Translates to: NGRTLGTEYTWWPMS*NIYLSIVERNPSEH Trigger: GTGTTCAGAGGGATTCCGTTCCACAATTGACAAATAGATATTTCAGGACATGGGCCACCAAGTGTACTCCGTTCCCAGTGTCCTCCCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CCA 90 bp | CATTGTAGCTTTCCCTCTTATATCAACACAACCGAAGGTCATTGCTaGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACAAGC | + |
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Preference number: 1 (lower is better) Translates to: HCSFPSYINTTEGHC*MRHYLLVLTNQPTS Trigger: GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACCTTCGGTTGTGTTGATATAAGAGGGAAAGCTACAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 90 bp | CTTCATTGTAGCTTTCCCTCTTATATCAACACAACCGAAGGTCATTaGTGGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACA | + |
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Preference number: 1 (lower is better) Translates to: LHCSFPSYINTTEGH*WMRHYLLVLTNQPT Trigger: TGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACCTTCGGTTGTGTTGATATAAGAGGGAAAGCTACAATGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 90 bp | CATACACTTTTACACAAATATCTATTAGAAAATGTAACCGATAACTaGACAGTTCAGAACGGGAGGACACTGGGAACGGAGTACACTTGG | + |
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Preference number: 1 (lower is better) Translates to: HTLLHKYLLENVTDN*TVQNGRTLGTEYTW Trigger: CCAAGTGTACTCCGTTCCCAGTGTCCTCCCGTTCTGAACTGTGCAGTTATCGGTTACATTTTCTAATAGATATTTGTGTAAAAGTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 90 bp | GTTTGTATGAGGAGAAGAGGAGTCCAACAGAAAGTCACTTTAGTCTaGAAGTCAATAAAGACAGAGCTCTGCATTATAATATTCTTCTGG | + |
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Preference number: 1 (lower is better) Translates to: VCMRRRGVQQKVTLV*KSIKTELCIIIFFW Trigger: CCAGAAGAATATTATAATGCAGAGCTCTGTCTTTATTGACTTTCAGACTAAAGTGACTTTCTGTTGGACTCCTCTTCTCCTCATACAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 90 bp | AAAACTAGAGGTAATGTAGAAGGCTCATTTCTTCACCATCACCAGTaGGAACTCTATCTGTACCCTACATTTTGTAAACTGAGTTTAAGA | + |
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Preference number: 1 (lower is better) Translates to: KTRGNVEGSFLHHHQ*ELYLYPTFCKLSLR Trigger: TCTTAAACTCAGTTTACAAAATGTAGGGTACAGATAGAGTTCTCACTGGTGATGGTGAAGAAATGAGCCTTCTACATTACCTCTAGTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTGATTCAGATTCTGAGGTGGGAGTaGGGGATGGGCTGTCTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SKVLADLSISPVAFLLIQILRWE*GMGCLV Trigger: AACAAGACAGCCCATCCCCCACTCCCACCTCAGAAT...CTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CAA 90 bp | ATCCGTGAAGACTGGACTCTTGTGTACGTGGACTTCTCCAGCAGCTaGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATATAT | + |
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Preference number: 2 (lower is better) Translates to: IREDWTLVYVDFSSS*SNIWSGMSVLSCIY Trigger: ATATATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAGTCCACGTACACAAGAGTCCAGTCTTCACGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CAA 90 bp | AACACAACCGAAGGTCATTGCTGGATGCGGCATTATCTTTTAGTCTaGACAAACCAGCCAACAAGCCTCTACACAAAGATGCATGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: NTTEGHCWMRHYLLV*TNQPTSLYTKMHEN Trigger: GTTTTCATGCATCTTTGTGTAGAGGCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACCTTCGGTTGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR TCA 90 bp | GATATCGCTGTGAATCTCACCATGATCAAAGACCCACTACAGCTTTCTGCTCAAGAACAAAGAGGTAAGTaGCGCGGCAACTTTGTTATT | + |
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Preference number: 2 (lower is better) Translates to: DIAVNLTMIKDPLQLSAQEQRGK*RGNFVI Trigger: AATAACAAAGTTGCCGCGTCACTTACCTCTTTGTTC...TTGAGCAGAAAGCTGTAGTGGGTCTTTGATCATGGTGAGATTCACAGCGATATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CAA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTaGATTCAGCTGGCTAACCTGTCTGGTGGTCATAAAGAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: SKVLADLSISPVAFL*IQLANLSGGHKEQR Trigger: TCTTTGTTCTTTATGACCACCAGACAGGTTAGCCAGCTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATGTTAATCTCCATAGATaGTCAGACATGATTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYVNLHR*SDMIVS Trigger: GGAGACAATCATGTCTGAGCATCTATGGAGATTAAC...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CCA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTGATTCAGTGTTCCATGAGAGACTaGGGAAGAATAGTGGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SKVLADLSISPVAFLLIQCSMRD*GRIVVQ Trigger: TTGGACCACTATTCTTCCCCAGTCTCTCATGGAACA...CTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR GCA 90 bp | GGTCATTGCTGGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACAAGCTCCAGATTTTTAACTTaGAGAACCATAGTGTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: GHCWMRHYLLVLTNQPTSSRFLT*RTIVLC Trigger: ACACAACACTATGGTTCTGCAAGTTAAAAATCTGGA...GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CAA 90 bp | CTATGTTTTATTCCTGAAACTGATTCTTTTAGGCTAGTTGTCTTATaGGGATGGGCATCCTTTGAGAAGCAAGACTGTTCTAGGCAAACC | + |
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Preference number: 2 (lower is better) Translates to: LCFIPETDSFRLVVL*GWASFEKQDCSRQT Trigger: GGTTTGCCTAGAACAGTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATCAGTTTCAGGAATAAAACATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR TCA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTGATTCAGAAGTGGTGTCAGGCATaGATTTGTCTTTCTATGATC | + |
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Preference number: 2 (lower is better) Translates to: SKVLADLSISPVAFLLIQKWCQA*ICLSMI Trigger: GATCATAGAAAGACAAATTCATGCCTGACACCACTT...CTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATTGTAAGCAATGCAAGTaGATAACCACTACTCTAATA | + |
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Preference number: 2 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYCKQCK*ITTTLI Trigger: TATTAGAGTAGTGGTTATGCACTTGCATTGCTTACA...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGTTAATCTCCATAGATGCTCAGACATGATTGTCTCCTTGTGTCTAAACACACTTTGCAAAGATACATaGTTTTACAGTCGGGGGTTA | + |
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Preference number: 2 (lower is better) Translates to: TVNLHRCSDMIVSLCLNTLCKDT*FYSRGL Trigger: TAACCCCCGACTGTAAAATCATGTATCTTTGCAAAG...TGTGTTTAGACACAAGGAGACAATCATGTCTGAGCATCTATGGAGATTAACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CAA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTaGCCCTTCATTCCCAAATGCCTTGAAAATAAGATACACTACAGC | + |
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Preference number: 2 (lower is better) Translates to: FFNGGLSGFLKQDIS*PFIPKCLENKIHYS Trigger: GCTGTAGTGTATCTTATTTTCAAGGCATTTGGGAATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| 3UTR CAA 90 bp | TGTCTGGTGGTCATAAAGAACAAAGAGGTAAGTGACGCGGCAACTTaGTTATTCTTTGTGTCTTTCCTAAACTATGTTTTATTCCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: CLVVIKNKEVSDAAT*LFFVSFLNYVLFLK Trigger: TTTCAGGAATAAAACATAGTTTAGGAAAGACACAAAGAATAACAAAGTTGCCGCGTCACTTACCTCTTTGTTCTTTATGACCACCAGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 72 bp | CCAACGGCCCACATGTTCTCCTGTACTCCCCTCAAATaGTGCCAGGGAATGGCATCCGTGAAGACTGGACTC | + |
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Preference number: 3 (lower is better) Translates to: PTAHMFSCTPLK*CQGMASVKTGL Trigger: GAGTCCAGTCTTCACGGATGCCATTCCCTGGCAGCATTTGAGGGGAGTACAGGAGAACATGTGGGCCGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 72 bp | ACGGCCCACATGTTCTCCTGTACTCCCCTCAAATGCTaGCAGGGAATGGCATCCGTGAAGACTGGACTCTTG | + |
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Preference number: 3 (lower is better) Translates to: TAHMFSCTPLKC*QGMASVKTGLL Trigger: CAAGAGTCCAGTCTTCACGGATGCCATTCCCTGGCAGCATTTGAGGGGAGTACAGGAGAACATGTGGGCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | GTACTCCCCTCAAATGCTGCCAGGGAATGGCATCCGTaGAGACTGGACTCTTGTGTACGTGGACTTCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VLPSNAAREWHP*RLDSCVRGLLQ Trigger: CTGGAGAAGTCCACGTACACAAGAGTCCAGTCTTCACGGATGCCATTCCCTGGCAGCATTTGAGGGGAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | ACACTGGGAACGGAGTACACTTGGTGGCCCATGTCCTaGAATATCTATTTGTCAATTGTGGAACGGAATCCC | + |
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Preference number: 3 (lower is better) Translates to: TLGTEYTWWPMS*NIYLSIVERNP Trigger: GGGATTCCGTTCCACAATTGACAAATAGATATTTCAGGACATGGGCCACCAAGTGTACTCCGTTCCCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 72 bp | GGGGGTATCCCCTCTGTACAGCTCGTTTGTAAGCAATaGAAGTGCATAACCACTACTCTAATACAGTGCTCA | + |
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Preference number: 3 (lower is better) Translates to: GGIPSVQLVCKQ*KCITTTLIQCS Trigger: TGAGCACTGTATTAGAGTAGTGGTTATGCACTTGCATTGCTTACAAACGAGCTGTACAGAGGGGATACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CAA 90 bp | CAACAAGCCTCTACACAAAGATGCATGAAAACCACCCGCCGGTGTTGTTTCTGCCTCCAGATTTTTAACTaGCAGAACCATAGTGTTGTG | + |
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Preference number: 3 (lower is better) Translates to: QQASTQRCMKTTRRCCFCLQIFN*QNHSVV Trigger: CACAACACTATGGTTCTGCAAGTTAAAAATCTGGAG...GCAGAAACAACACCGGCGGGTGGTTTTCATGCATCTTTGTGTAGAGGCTTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATTGGGATGGGCATCCTTaGAGAAGCAAGACTGTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYWDGHP*RSKTVL Trigger: TAGAACAGTCTTGCTTCTCAAAGGATGCCCATCCCA...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | TGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTaGTTCAGCTGGCTAACCTGTCTGGTGGTCATAAAG | + |
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Preference number: 3 (lower is better) Translates to: WLTYRSLLLLSF*FSWLTCLVVIK Trigger: CTTTATGACCACCAGACAGGTTAGCCAGCTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CCA 72 bp | CGTGGACTTCTCCAGCAGCTTGAGCAACATCTGGTCTaGCATGTCAGTTTTAAGTTGTATATATACGACCTA | + |
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Preference number: 3 (lower is better) Translates to: RGLLQQLEQHLV*HVSFKLYIYDL Trigger: TAGGTCGTATATATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAGTCCACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CCA 72 bp | GTGTACGTGGACTTCTCCAGCAGCTTGAGCAACATCTaGTCTGGCATGTCAGTTTTAAGTTGTATATATACG | + |
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Preference number: 3 (lower is better) Translates to: VYVDFSSSLSNI*SGMSVLSCIYT Trigger: CGTATATATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAGTCCACGTACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | AGCCCATTGTCTCTCACTCCCTGTGATTGCTTAGTATaGAATGGAAGGTTTGGGGTTAAACAAAACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SPLSLTPCDCLV*NGRFGVKQNRR Trigger: TCTCCTGTTTTGTTTAACCCCAAACCTTCCATTTCATACTAAGCAATCACAGGGAGTGAGAGACAATGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 72 bp | TGCATTTTCCAACTATTCAGCGTACTCCCCTTACAGTaGAACCCAAACATGTCAACTACACTAAATATCCGG | + |
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Preference number: 3 (lower is better) Translates to: CIFQLFSVLPLQ*NPNMSTTLNIR Trigger: CCGGATATTTAGTGTAGTTGACATGTTTGGGTTGCACTGTAAGGGGAGTACGCTGAATAGTTGGAAAATGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTCATGCCTTAAAGTAGGCTTCAATGCATTTGAGCATTGTTTTAAACCTACCAACCACCCGCCGGTGTaGTTTCTGCTTCTAAAAACA | + |
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Preference number: 3 (lower is better) Translates to: QSCLKVGFNAFEHCFKPTNHPPV*FLLLKT Trigger: TGTTTTTAGAAGCAGAAACAACACCGGCGGGTGGTT...GGTAGGTTTAAAACAATGCTCAAATGCATTGAAGCCTACTTTAAGGCATGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | AACCTGTCTGGTGGTCATAAAGAACAAAGAGGTAAGTaGCGCGGCAACTTTGTTATTCTTTGTGTCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: NLSGGHKEQRGK*RGNFVILCVFP Trigger: AGGAAAGACACAAAGAATAACAAAGTTGCCGCGTCACTTACCTCTTTGTTCTTTATGACCACCAGACAGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 72 bp | ATCCCCTCTGTACAGCTCGTTTGTAAGCAATGCAAGTaGATAACCACTACTCTAATACAGTGCTCAAAAGAT | + |
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Preference number: 3 (lower is better) Translates to: IPSVQLVCKQCK*ITTTLIQCSKD Trigger: ATCTTTTGAGCACTGTATTAGAGTAGTGGTTATGCACTTGCATTGCTTACAAACGAGCTGTACAGAGGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR GCA 72 bp | TTACACAAATATCTATTAGAAAATGTAACCGATAACTaGACAGTTCAGAACGGGAGGACACTGGGAACGGAG | + |
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Preference number: 3 (lower is better) Translates to: LHKYLLENVTDN*TVQNGRTLGTE Trigger: CTCCGTTCCCAGTGTCCTCCCGTTCTGAACTGTGCAGTTATCGGTTACATTTTCTAATAGATATTTGTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR CCA 72 bp | GAAACTGATTCTTTTAGGCTAGTTGTCTTATTGGGATaGGCATCCTTTGAGAAGCAAGACTGTTCTAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: ETDSFRLVVLLG*ASFEKQDCSRQ Trigger: TTGCCTAGAACAGTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGAATCTCACCATGATCAAAGACCCACTACAGCTTTCTGCTCAACATATTTGAGTGACGCGGCAACTTaGTTATTCTTTGTGTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: CESHHDQRPTTAFCSTYLSDAAT*LFFVSF Trigger: GAAAGACACAAAGAATAACAAAGTTGCCGCGTCACT...CAAATATGTTGAGCAGAAAGCTGTAGTGGGTCTTTGATCATGGTGAGATTCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CAA 90 bp | TGTGAATCTCACCATGATCAAAGACCCACTACAGCTTTCTGCTCAACATATTTGTTAGACTCTAAAGTCTaGGCTGACTTATCGATCTCT | + |
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Preference number: 3 (lower is better) Translates to: CESHHDQRPTTAFCSTYLLDSKV*ADLSIS Trigger: AGAGATCGATAAGTCAGCCAAGACTTTAGAGTCTAA...CAAATATGTTGAGCAGAAAGCTGTAGTGGGTCTTTGATCATGGTGAGATTCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | GGTAATGTAGAAGGCTCATTTCTTCACCATCACCAGTaGGAACTCTATCTGTACCCTACATTTTGTAAACTG | + |
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Preference number: 3 (lower is better) Translates to: GNVEGSFLHHHQ*ELYLYPTFCKL Trigger: CAGTTTACAAAATGTAGGGTACAGATAGAGTTCTCACTGGTGATGGTGAAGAAATGAGCCTTCTACATTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | TTAGCACTAATTGAACAACATCCACACCAGGGCTTCTaGCAAAGGATGGAACATTCCATTCCTTTCATGATT | + |
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Preference number: 3 (lower is better) Translates to: LALIEQHPHQGF*QRMEHSIPFMI Trigger: AATCATGAAAGGAATGGAATGTTCCATCCTTTGTCAGAAGCCCTGGTGTGGATGTTGTTCAATTAGTGCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | TACAATCAGCTAGTCTTTCTATGCTTTAGCACTAATTaGACAACATCCACACCAGGGCTTCTGACAAAGGAT | + |
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Preference number: 3 (lower is better) Translates to: YNQLVFLCFSTN*TTSTPGLLTKD Trigger: ATCCTTTGTCAGAAGCCCTGGTGTGGATGTTGTTCAATTAGTGCTAAAGCATAGAAAGACTAGCTGATTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR-3UTR CAA 90 bp | CAGTCATGCCTTAAAGTAGGCTTCAATGCATTTGAGCATTGTTTTAAACCTACCCATTATCTTTTAGTCTaGACAAACCAGCCAACAAGC | + |
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Preference number: 3 (lower is better) Translates to: QSCLKVGFNAFEHCFKPTHYLLV*TNQPTS Trigger: GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATG...GGTAGGTTTAAAACAATGCTCAAATGCATTGAAGCCTACTTTAAGGCATGACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| 3UTR TCA 72 bp | AGGAGAAGAGGAGTCCAACAGAAAGTCACTTTAGTCTaGAAGTCAATAAAGACAGAGCTCTGCATTATAATA | + |
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Preference number: 3 (lower is better) Translates to: RRRGVQQKVTLV*KSIKTELCIII Trigger: TATTATAATGCAGAGCTCTGTCTTTATTGACTTTCAGACTAAAGTGACTTTCTGTTGGACTCCTCTTCTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR GCA 90 bp | GATTCTTTTAGGCTAGTTGTCTTATTGGGATGGGCATCCTTTGAGAAGCAAGACGCGCGCGATCTTGGCTaGCTGCGGGAAGGCGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: DSFRLVVLLGWASFEKQDARDLG*LREGAP Trigger: GGGGGCGCCTTCCCGCAGGCAGCCAAGATCGCGCGC...GTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR GCA 90 bp | GATTCTTTTAGGCTAGTTGTCTTATTGGGATGGGCATCCTTTGAGAAGCAAGACCCGAGGAGGATTTCCTaGCGGCCCCGCCGCCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: DSFRLVVLLGWASFEKQDPRRIS*RPRRPH Trigger: GTGGGGGCGGCGGGGCCGGCAGGAAATCCTCCTCGG...GTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CCA 90 bp | GGTCATTGCTGGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACAAGCGCCCCCTCGGGCAGGTaGCTTTCCTTGGGCAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GHCWMRHYLLVLTNQPTSAPSGR*LSLGKP Trigger: GGGCTTGCCCAAGGAAAGCCACCTGCCCGAGGGGGC...GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR TCA 90 bp | CAACAAGCCTCTACACAAAGATGCATGAAAACCACCCGCCGGTGTTGTTTCTGCGAGGAGGAGGAGGAATaGTTCTGCGGGCAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QQASTQRCMKTTRRCCFCEEEEE*FCGQSA Trigger: GGCAGACTGCCCGCAGAATCATTCCTCCTCCTCCTC...GCAGAAACAACACCGGCGGGTGGTTTTCATGCATCTTTGTGTAGAGGCTTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATGCGATCTTGGCTGCCTaGGGGAAGGCGCCCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYAILAA*GKAPPL Trigger: CAACGGGGGCGCCTTCCCGCAGGCAGCCAAGATCGC...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATGCAGGTGGCTTTCCTTaGGCAAGCCCGGGGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYAGGFP*ASPGPP Trigger: CGGAGGCCCCGGGCTTGCCCAAGGAAAGCCACCTGC...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR TCA 90 bp | GGTCATTGCTGGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACAAGCGCTGCTGCGGGGGAGTaGAGGGCTGTCATGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: GHCWMRHYLLVLTNQPTSAAAGE*RAVMTM Trigger: CATCGTCATGACAGCCCTTCACTCCCCCGCAGCAGC...GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCTCCGGTGGTGCATGCTaGTCCTGCCGCCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FFNGGLSGFLKQDISLPFSGGAC*SCRRRR Trigger: GCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGA...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCATGCCTTAAAGTAGGCTTCAATGCATTTGAGCATTGTTTTAAACCTACCCGTTCCGGTGGTGCATaGTGGTCCTGCCGCCGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QSCLKVGFNAFEHCFKPTRSGGA*WSCRRR Trigger: GCGGCGGCGGCAGGACCAGCATGCACCACCGGAACG...GGTAGGTTTAAAACAATGCTCAAATGCATTGAAGCCTACTTTAAGGCATGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | GATATCGCTGTGAATCTCACCATGATCAAAGACCCACTACAGCTTTCTGCTCAATGGGAGTCGTTCCGGTaGTGCATGCTGGTCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: DIAVNLTMIKDPLQLSAQWESFR*CMLVLP Trigger: CGGCAGGACCAGCATGCACCACCGGAACGACTCCCA...TTGAGCAGAAAGCTGTAGTGGGTCTTTGATCATGGTGAGATTCACAGCGATATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATGGAAGGCGCCCCCGTTaGTCTTGTAGAAGGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYGRRPR*SCRRRW Trigger: CCACCTCCTTCTACAAGACCAACGGGGGCGCCTTCC...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR TCA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTGTCTGTGACGGCTGCTaGGGCTGCTGCGGGGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FNGGLSGFLKQDISLPFIVCDGC*GCCGGV Trigger: CACTCCCCCGCAGCAGCCTCAGCAGCCGTCACAGAC...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGGAAGCGTCCCATTCAAGTGTGAAAATAAATTTTCACGTGCTCATAGTTTGCAACGACGGCTCTaGCGGACAGCCAGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKGSVPFKCENKFSRAHSLQRRL*RTASLP Trigger: GGGAAGGCTGGCTGTCCGCCAGAGCCGTCGTTGCAA...ACTATGAGCACGTGAAAATTTATTTTCACACTTGAATGGGACGCTTCCCTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR TCA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCGCTGCTGCGGGGGAGTaGAGGGCTGTCATGACGATG | + |
|
Preference number: 4 (lower is better) Translates to: FFNGGLSGFLKQDISLPFAAAGE*RAVMTM Trigger: CATCGTCATGACAGCCCTTCACTCCCCCGCAGCAGC...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | GATTCTTTTAGGCTAGTTGTCTTATTGGGATGGGCATCCTTTGAGAAGCAAGACCCGTTTTGCGGTTCCTaGAACTGCTGCAGACGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSFRLVVLLGWASFEKQDPFCGS*NCCRRH Trigger: GTGGCGTCTGCAGCAGTTGCAGGAACCGCAAAACGG...GTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| 3UTR CAA 72 bp | GACTGGACTCTTGTGTACGTGGACTTCTCCAGCAGCTaGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DWTLVYVDFSSS*SNIWSGMSVLS Trigger: ACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAGTCCACGTACACAAGAGTCCAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTTTGCAACGACGGCTCTaGCGGACAGCCAGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNGGLSGFLKQDISLPFILQRRL*RTASLP Trigger: GGGAAGGCTGGCTGTCCGCCAGAGCCGTCGTTGCAA...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR TCA 90 bp | AATTTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCGAGGAGGAGGAGGAATaGTTCTGCGGGCAGTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFNGGLSGFLKQDISLPEEEEE*FCGQSA Trigger: GGCAGACTGCCCGCAGAATCATTCCTCCTCCTCCTC...GGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | GGTCATTGCTGGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACAAGCTTAGTATTTGCCATTTaGAACGACGGCTCTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHCWMRHYLLVLTNQPTSLVFAI*NDGSGG Trigger: TCCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAA...GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTCCCCCGCCAAAGGTCTaGAGTGTTCGGGGGATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FNGGLSGFLKQDISLPFIPPPKV*SVRGIR Trigger: CCTTATCCCCCGAACACTGCAGACCTTTGGCGGGGG...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| 3UTR CAA 72 bp | TGGAGTCAGTACTACTTTGTGAGTGGGCCTCTGTGTTaGTATGAGGAGAAGAGGAGTCCAACAGAAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WSQYYFVSGPLC*YEEKRSPTESH Trigger: GTGACTTTCTGTTGGACTCCTCTTCTCCTCATACAAACACAGAGGCCCACTCACAAAGTAGTACTGACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR TCA 90 bp | ACTGTTAATCTCCATAGATGCTCAGACATGATTGTCTCCTTGTGTCTAAACACACAGCAGCGCCGCATTTaGGCTTGTTCATGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVNLHRCSDMIVSLCLNTQQRRI*ACSCIP Trigger: GGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTG...TGTGTTTAGACACAAGGAGACAATCATGTCTGAGCATCTATGGAGATTAACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | AATTTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCCCGTTTTGCGGTTCCTaGAACTGCTGCAGACGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NFFNGGLSGFLKQDISLPPFCGS*NCCRRH Trigger: GTGGCGTCTGCAGCAGTTGCAGGAACCGCAAAACGG...GGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | GATATCGCTGTGAATCTCACCATGATCAAAGACCCACTACAGCTTTCTGCTCAAGGCAGTCTGCCAGATTaGCAATTTGAAACGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DIAVNLTMIKDPLQLSAQGSLPD*QFETHC Trigger: ACAGTGCGTTTCAAATTGCCAATCTGGCAGACTGCC...TTGAGCAGAAAGCTGTAGTGGGTCTTTGATCATGGTGAGATTCACAGCGATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTGATTCAGGGAACGCTTCAGCGCTaGGAACAGGTGTTCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SKVLADLSISPVAFLLIQGTLQR*EQVFSL Trigger: TAGAGAGAACACCTGTTCCCAGCGCTGAAGCGTTCC...CTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR TCA 90 bp | AATTTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCCAGCAGCGCCGCATTTaGGCTTGTTCATGCATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFFNGGLSGFLKQDISLPQQRRI*ACSCIP Trigger: GGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTG...GGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| 3UTR CAA 72 bp | GAAGGTCATTGCTGGATGCGGCATTATCTTTTAGTCTaGACAAACCAGCCAACAAGCCTCTACACAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: EGHCWMRHYLLV*TNQPTSLYTKM Trigger: CATCTTTGTGTAGAGGCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| 3UTR CAA 72 bp | TTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTaGATTCAGCTGGCTAACCTGTCTGGTGGTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: LADLSISPVAFL*IQLANLSGGHK Trigger: TTTATGACCACCAGACAGGTTAGCCAGCTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATGAGGAAATTAGTATTTaGCATTTGCAACGACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYEEISI*HLQRRL Trigger: GAGCCGTCGTTGCAAATGGCAAATACTAATTTCCTC...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTGGAACGCTTCAGCGCTaGGAACAGGTGTTCTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FNGGLSGFLKQDISLPFIGTLQR*EQVFSL Trigger: TAGAGAGAACACCTGTTCCCAGCGCTGAAGCGTTCC...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCTCTTGTAGAAGGAGGTaGCAAAGGAGCGGTAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: FFNGGLSGFLKQDISLPFSCRRR*QRSGNA Trigger: AGCGTTACCGCTCCTTTGCCACCTCCTTCTACAAGA...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTTTAGTATTTGCCATTTaGAACGACGGCTCTGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FNGGLSGFLKQDISLPFILVFAI*NDGSGG Trigger: TCCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAA...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCGAGATTCATTATCTCTaGTTCAGCAGCGCCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: FFNGGLSGFLKQDISLPFEIHYL*FSSAAF Trigger: AAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTC...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTGGCAGTCTGCCAGATTaGCAATTTGAAACGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FNGGLSGFLKQDISLPFIGSLPD*QFETHC Trigger: ACAGTGCGTTTCAAATTGCCAATCTGGCAGACTGCC...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCGAGGAAATTAGTATTTaGCATTTGCAACGACGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FFNGGLSGFLKQDISLPFEEISI*HLQRRL Trigger: GAGCCGTCGTTGCAAATGGCAAATACTAATTTCCTC...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR GCA 90 bp | AATTTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCGAGATTCATTATCTCTaGTTCAGCAGCGCCGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NFFNGGLSGFLKQDISLPEIHYL*FSSAAF Trigger: AAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTC...GGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR CCA 90 bp | AATTTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCCTAAATTTGCAGATCTaGTGTCCCGTTTTGCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NFFNGGLSGFLKQDISLPLNLQI*CPVLRF Trigger: GAACCGCAAAACGGGACACCAGATCTGCAAATTTAG...GGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| 3UTR CAA 72 bp | ATTCCTGAAACTGATTCTTTTAGGCTAGTTGTCTTATaGGGATGGGCATCCTTTGAGAAGCAAGACTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IPETDSFRLVVL*GWASFEKQDCS Trigger: AGAACAGTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATCAGTTTCAGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS GCA 90 bp | CCTTCCCCAGCCGCTGGGAGTCGTTCCGGTGGTGCATGCTGGTCCTaGCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCTGCCACCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPAAGSRSGGACWS*RRRRRRRLRRCHRR Trigger: GCGGCGGTGGCAGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGAAGG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS GCA 90 bp | GACAGCCAGCCTTCCCCAGCCGCTGGGAGTCGTTCCGGTGGTGCATaGTGGTCCTGCCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSQPSPAAGSRSGGA*WSCRRRRRRRLRRC Trigger: GCAGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGAAGGCTGGCTGTC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS CCA 90 bp | AGCCAGCCTTCCCCAGCCGCTGGGAGTCGTTCCGGTGGTGCATGCTaGTCCTGCCGCCGCCGCCGCCGCCGCCGCCTCCGCCGCTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: SQPSPAAGSRSGGAC*SCRRRRRRRLRRCH Trigger: GTGGCAGCGGCGGAGGCGGCGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGAAGGCTGGCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS CCA 90 bp | TCTGGCGGACAGCCAGCCTTCCCCAGCCGCTGGGAGTCGTTCCGGTaGTGCATGCTGGTCCTGCCGCCGCCGCCGCCGCCGCCGCCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGGQPAFPSRWESFR*CMLVLPPPPPPPPP Trigger: CGGAGGCGGCGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGAAGGCTGGCTGTCCGCCAGA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS CCA 90 bp | AATCCACAAGGCTGTTCAGGGCCCCCTCGGGCAGGTGGCTTTCCTTaGGCAAGCCCGGGGCCTCCGGGCTCGGCCCGGGCTCCACGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NPQGCSGPPRAGGFP*ASPGPPGSARAPRR Trigger: TCTGCGTGGAGCCCGGGCCGAGCCCGGAGGCCCCGGGCTTGCCCAAGGAAAGCCACCTGCCCGAGGGGGCCCTGAACAGCCTTGTGGATT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS TCA 90 bp | GTCTGCCAGATTGGCAATTTGAAACGCACTGTCTGTGACGGCTGCTaGGGCTGCTGCGGGGGAGTGAAGGGCTGTCATGACGATGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCQIGNLKRTVCDGC*GCCGGVKGCHDDDP Trigger: GGGGTCATCGTCATGACAGCCCTTCACTCCCCCGCAGCAGCCTCAGCAGCCGTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS CCA 90 bp | TGGCTGCCTGCGGGAAGGCGCCCCCGTTGGTCTTGTAGAAGGAGGTaGCAAAGGAGCGGTAACGCTCCATCTCCGAGTTGTAATCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: WLPAGRRPRWSCRRR*QRSGNAPSPSCNPQ Trigger: TTGTGGATTACAACTCGGAGATGGAGCGTTACCGCTCCTTTGCCACCTCCTTCTACAAGACCAACGGGGGCGCCTTCCCGCAGGCAGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS GCA 90 bp | CAGTGTTCGGGGGATAAGGTGGAGAGGAAATTAGTATTTGCCATTTaGAACGACGGCTCTGGCGGACAGCCAGCCTTCCCCAGCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QCSGDKVERKLVFAI*NDGSGGQPAFPSRW Trigger: CCAGCGGCTGGGGAAGGCTGGCTGTCCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAATTTCCTCTCCACCTTATCCCCCGAACACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS TCA 90 bp | CCCGCTCGGGGAGATTCATTATCTCTGCTTCAGCAGCGCCGCATTTaGGCTTGTTCATGCATTCCCCCGCCAAAGGTCTGCAGTGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PARGDSLSLLQQRRI*ACSCIPPPKVCSVR Trigger: CCGAACACTGCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTCCCCGAGCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
||
| CDS-3UTR CAA 90 bp | GGTCATTGCTGGATGCGGCATTATCTTTTAGTCTTGACAAACCAGCCAACAAGCCAGTTGATGAGCCTCTaGCAGGGCACGCAGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: GHCWMRHYLLVLTNQPTSQLMSL*QGTQTP Trigger: TGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTG...GCTTGTTGGCTGGTTTGTCAAGACTAAAAGATAATGCCGCATCCAGCAATGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
||
| CDS-3UTR CAA 90 bp | CAACAAGCCTCTACACAAAGATGCATGAAAACCACCCGCCGGTGTTGTTTCTGCATCTGGTGTCCCGTTTaGCGGTTCCTGCAACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QQASTQRCMKTTRRCCFCIWCPV*RFLQLL Trigger: CAGCAGTTGCAGGAACCGCAAAACGGGACACCAGAT...GCAGAAACAACACCGGCGGGTGGTTTTCATGCATCTTTGTGTAGAGGCTTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | CAGTCATGCCTTAAAGTAGGCTTCAATGCATTTGAGCATTGTTTTAAACCTACCGGCAGGTGGCTTTCCTaGGGCAAGCCCGGGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: QSCLKVGFNAFEHCFKPTGRWLS*GKPGAS Trigger: GGAGGCCCCGGGCTTGCCCAAGGAAAGCCACCTGCC...GGTAGGTTTAAAACAATGCTCAAATGCATTGAAGCCTACTTTAAGGCATGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TGTGAATCTCACCATGATCAAAGACCCACTACAGCTTTCTGCTCAACATATTTGGCGCCGCATTTGAGCTaGTTCATGCATTCCCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: CESHHDQRPTTAFCSTYLAPHLS*FMHSPA Trigger: GGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGC...CAAATATGTTGAGCAGAAAGCTGTAGTGGGTCTTTGATCATGGTGAGATTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTGATTCAGCTGCAGACGCCACAGTaGATGAGCCTCTTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SKVLADLSISPVAFLLIQLQTPQ*MSLLQG Trigger: GCCCTGCAAGAGGCTCATCAACTGTGGCGTCTGCAG...CTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCGCGCCGCATTTGAGCTaGTTCATGCATTCCCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: FFNGGLSGFLKQDISLPFAPHLS*FMHSPA Trigger: GGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGC...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TCTAAAGTCTTGGCTGACTTATCGATCTCTCCTGTTGCTTTCCTTTTGATTCAGCTTTTCCTCTTCTTCTaGGCCGGGTTGGCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: SKVLADLSISPVAFLLIQLFLFF*AGLAPP Trigger: TGGCGGAGCCAACCCGGCCAAGAAGAAGAGGAAAAG...CTGAATCAAAAGGAAAGCAACAGGAGAGATCGATAAGTCAGCCAAGACTTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | CTTCTCCAGCAGCTTGAGCAACATCTGGTCTGGCATGTCAGTTTTAAGTTGTATATTAGTATTTGCCATTaGCAACGACGGCTCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LLQQLEQHLVWHVSFKLYISICH*QRRLWR Trigger: CCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAAT...ATACAACTTAAAACTGACATGCCAGACCAGATGTTGCTCAAGCTGCTGGAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTCAGTTGATGAGCCTCTaGCAGGGCACGCAGACCCCA | + |
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Preference number: 5 (lower is better) Translates to: FNGGLSGFLKQDISLPFIQLMSL*QGTQTP Trigger: TGGGGTCTGCGTGCCCTGCAAGAGGCTCATCAACTG...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTCTGCAGACGCCACAGTaGATGAGCCTCTTGCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: FNGGLSGFLKQDISLPFILQTPQ*MSLLQG Trigger: GCCCTGCAAGAGGCTCATCAACTGTGGCGTCTGCAG...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTCTTTTCCTCTTCTTCTaGGCCGGGTTGGCTCCGCCA | + |
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Preference number: 5 (lower is better) Translates to: FNGGLSGFLKQDISLPFILFLFF*AGLAPP Trigger: TGGCGGAGCCAACCCGGCCAAGAAGAAGAGGAAAAG...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | GATTCTTTTAGGCTAGTTGTCTTATTGGGATGGGCATCCTTTGAGAAGCAAGACTGCCAGATTGGCAATTaGAAACGCACTGTCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: DSFRLVVLLGWASFEKQDCQIGN*KRTVCD Trigger: GTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCA...GTCTTGCTTCTCAAAGGATGCCCATCCCAATAAGACAACTAGCCTAAAAGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | AATTTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCATCTGGTGTCCCGTTTaGCGGTTCCTGCAACTGCTG | + |
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Preference number: 5 (lower is better) Translates to: NFFNGGLSGFLKQDISLPIWCPV*RFLQLL Trigger: CAGCAGTTGCAGGAACCGCAAAACGGGACACCAGAT...GGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTTCAGCAGCGCCGCATTaGAGCTTGTTCATGCATTCC | + |
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Preference number: 5 (lower is better) Translates to: FNGGLSGFLKQDISLPFISAAPH*SLFMHS Trigger: GGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGA...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCATTATTAGTATTTGCCATTaGCAACGACGGCTCTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: FNGGLSGFLKQDISLPFIISICH*QRRLWR Trigger: CCGCCAGAGCCGTCGTTGCAAATGGCAAATACTAAT...AATGAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS-3UTR CAA 90 bp | TTCTTCAATGGTGGACTAAGCGGTTTCTTAAAACAAGACATTAGTTTGCCCTTCTGCCAGATTGGCAATTaGAAACGCACTGTCTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: FFNGGLSGFLKQDISLPFCQIGN*KRTVCD Trigger: GTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCA...GAAGGGCAAACTAATGTCTTGTTTTAAGAAACCGCTTAGTCCACCATTGAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS CCA 72 bp | TCCCCAGCCGCTGGGAGTCGTTCCGGTGGTGCATGCTaGTCCTGCCGCCGCCGCCGCCGCCGCCGCCTCCGC | + |
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Preference number: 6 (lower is better) Translates to: SPAAGSRSGGAC*SCRRRRRRRLR Trigger: GCGGAGGCGGCGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS GCA 72 bp | CCTTCCCCAGCCGCTGGGAGTCGTTCCGGTGGTGCATaGTGGTCCTGCCGCCGCCGCCGCCGCCGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PSPAAGSRSGGA*WSCRRRRRRRL Trigger: GAGGCGGCGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGAAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS CCA 72 bp | GGCTGTTCAGGGCCCCCTCGGGCAGGTGGCTTTCCTTaGGCAAGCCCGGGGCCTCCGGGCTCGGCCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GCSGPPRAGGFP*ASPGPPGSARA Trigger: AGCCCGGGCCGAGCCCGGAGGCCCCGGGCTTGCCCAAGGAAAGCCACCTGCCCGAGGGGGCCCTGAACAGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS CCA 72 bp | CAGCCAGCCTTCCCCAGCCGCTGGGAGTCGTTCCGGTaGTGCATGCTGGTCCTGCCGCCGCCGCCGCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: QPAFPSRWESFR*CMLVLPPPPPP Trigger: CGGCGGCGGCGGCGGCGGCAGGACCAGCATGCACCACCGGAACGACTCCCAGCGGCTGGGGAAGGCTGGCTG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS CAA 72 bp | AGGCTGTTCAGGGCCCCCTCGGGCAGGTGGCTTTCCTaGGGCAAGCCCGGGGCCTCCGGGCTCGGCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: RLFRAPSGRWLS*GKPGASGLGPG Trigger: GCCCGGGCCGAGCCCGGAGGCCCCGGGCTTGCCCAAGGAAAGCCACCTGCCCGAGGGGGCCCTGAACAGCCT 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS TCA 72 bp | CGGCGGCGGCGGCGCTGCTGGGGAAGATGGGGGTGGTaGTGCGCGCGATCTTGGCTGCCTGCGGGAAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: RRRRRCWGRWGW*CARSWLPAGRR Trigger: GCGCCTTCCCGCAGGCAGCCAAGATCGCGCGCATCACCACCCCCATCTTCCCCAGCAGCGCCGCCGCCGCCG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS CCA 72 bp | GCGCGATCTTGGCTGCCTGCGGGAAGGCGCCCCCGTTaGTCTTGTAGAAGGAGGTGGCAAAGGAGCGGTAAC | + |
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Preference number: 6 (lower is better) Translates to: ARSWLPAGRRPR*SCRRRWQRSGN Trigger: GTTACCGCTCCTTTGCCACCTCCTTCTACAAGACCAACGGGGGCGCCTTCCCGCAGGCAGCCAAGATCGCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS CCA 72 bp | GCGGGAAGGCGCCCCCGTTGGTCTTGTAGAAGGAGGTaGCAAAGGAGCGGTAACGCTCCATCTCCGAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: AGRRPRWSCRRR*QRSGNAPSPSC Trigger: ACAACTCGGAGATGGAGCGTTACCGCTCCTTTGCCACCTCCTTCTACAAGACCAACGGGGGCGCCTTCCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000181904.3 |
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| CDS TCA 72 bp | ATTGGCAATTTGAAACGCACTGTCTGTGACGGCTGCTaGGGCTGCTGCGGGGGAGTGAAGGGCTGTCATGAC | + |
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Preference number: 6 (lower is better) Translates to: IGNLKRTVCDGC*GCCGGVKGCHD Trigger: GTCATGACAGCCCTTCACTCCCCCGCAGCAGCCTCAGCAGCCGTCACAGACAGTGCGTTTCAAATTGCCAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS CAA 90 bp | ACCCGCTCGGGGAGATTCATTATCTCTGCTTCAGCAGCGCCGCATTaGAGCTTGTTCATGCATTCCCCCGCCAAAGGTCTGCAGTGTTCG | + |
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Preference number: 6 (lower is better) Translates to: TRSGRFIISASAAPH*SLFMHSPAKGLQCS Trigger: CGAACACTGCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTCCCCGAGCGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS GCA 72 bp | GGACGAGGAGGAGGAGGAATGATTCTGCGGGCAGTCTaGCAGATTGGCAATTTGAAACGCACTGTCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: GRGGGGMILRAV*QIGNLKRTVCD Trigger: GTCACAGACAGTGCGTTTCAAATTGCCAATCTGGCAGACTGCCCGCAGAATCATTCCTCCTCCTCCTCGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS TCA 72 bp | GGAGATTCATTATCTCTGCTTCAGCAGCGCCGCATTTaGGCTTGTTCATGCATTCCCCCGCCAAAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GDSLSLLQQRRI*ACSCIPPPKVC Trigger: GCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS CAA 72 bp | GGGAGATTCATTATCTCTGCTTCAGCAGCGCCGCATTaGAGCTTGTTCATGCATTCCCCCGCCAAAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GRFIISASAAPH*SLFMHSPAKGL Trigger: CAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGAAGCAGAGATAATGAATCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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| CDS CAA 72 bp | TTCATTATCTCTGCTTCAGCAGCGCCGCATTTGAGCTaGTTCATGCATTCCCCCGCCAAAGGTCTGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: FIISASAAPHLS*FMHSPAKGLQC Trigger: ACACTGCAGACCTTTGGCGGGGGAATGCATGAACAAGCTCAAATGCGGCGCTGCTGAAGCAGAGATAATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166288.2 ENSMUST00000181904.3 |
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