Pregenerated sensors for CXCR6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048521Ensembl transcript IDs: ENSMUST00000049810.9, ENSMUST00000216072.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACAAGCCATGGTGTTCAGTaGCTTCTCCATGATACTCCA | + |
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Preference number: 2 (lower is better) Translates to: PTEESSELKSPEHYLPATSHGVQ*LLHDTP Trigger: TGGAGTATCATGGAGAAGTCACTGAACACCATGGCT...TGTTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACATTTGTGTACCAGCCATaGTGTTCAGTGACTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: PTEESSELKSPEHYLPATFVYQP*CSVTSP Trigger: TGGAGAAGTCACTGAACACCATGGCTGGTACACAAA...TGTTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGCTTGTTGCATCCAAATaGTACAGCCATGCTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: SSSICMEPFQFSTACPLKLVASK*YSHAPR Trigger: TCTAGGAGCATGGCTGTATCATTTGGATGCAACAAG...CTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGCTTGTTGCATCCAAATaGTACAGCCATGCTCCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LFWPVFSPILLHFTRQFQLVASK*YSHAPR Trigger: TCTAGGAGCATGGCTGTATCATTTGGATGCAACAAG...CTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTTTGTGTACCAGCCATaGTGTTCAGTGACTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: LFWPVFSPILLHFTRQFQFVYQP*CSVTSP Trigger: TGGAGAAGTCACTGAACACCATGGCTGGTACACAAA...CTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGAATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR TCA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGGGTATATTTATATCTaGGAAGTTTTGTGTACCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HLYGAFSILNCLPTEESSGYIYI*EVLCTS Trigger: GCTGGTACACAAAACTTCTCAGATATAAATATACCC...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGGGGTATATTTATATCTaGGAAGTTTTGTGTACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LFWPVFSPILLHFTRQFQGYIYI*EVLCTS Trigger: GCTGGTACACAAAACTTCTCAGATATAAATATACCC...CTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGCAAGCAGCATTTGTATaGAGCCTTTTCAATTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: LFWPVFSPILLHFTRQFQQAAFV*SLFNSQ Trigger: TTGAGAATTGAAAAGGCTCCATACAAATGCTGCTTG...CTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR CAA 90 bp | TTGAGATCTCTAGAGTTAACCGTCATGACCTTGATTTCAGCATTCTaGAGGATGAAAGAGAGAAAGTGCTTCAAAATCTCAAGATACTCA | + |
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Preference number: 2 (lower is better) Translates to: LRSLELTVMTLISAF*RMKERKCFKISRYS Trigger: TGAGTATCTTGAGATTTTGAAGCACTTTCTCTCTTTCATCCTCAAGAATGCTGAAATCAAGGTCATGACGGTTAACTCTAGAGATCTCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR CCA 72 bp | ATAAGCATCCACCCATACAAAAGTCAGACAGACCCCTaGATGAGTCAGAACCTGGTCTCATTCAAGCAGCAT | + |
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Preference number: 3 (lower is better) Translates to: ISIHPYKSQTDP*MSQNLVSFKQH Trigger: ATGCTGCTTGAATGAGACCAGGTTCTGACTCATCCAGGGGTCTGTCTGACTTTTGTATGGGTGGATGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR TCA 72 bp | AGAGCCCTGAACATTATCTGCCAGCAACATCTTTGTTaGTGCAGCTCTTCAACTTTTAGGCCCAAACTTGGT | + |
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Preference number: 3 (lower is better) Translates to: RALNIICQQHLC*CSSSTFRPKLG Trigger: ACCAAGTTTGGGCCTAAAAGTTGAAGAGCTGCATCAACAAAGATGTTGCTGGCAGATAATGTTCAGGGCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGGCAAAGCTTTTCTTGTaGCATCCAAATGATACAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSSICMEPFQFSTACPLKAKLFL*HPNDTA Trigger: GGCTGTATCATTTGGATGCAACAAGAAAAGCTTTGC...CTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTAAACTGCCAGCAACATCTTaGTTGATGCAGCTCTTCAAC | + |
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Preference number: 3 (lower is better) Translates to: SGLFSVPYCCTLQDNSSKLPATS*LMQLFN Trigger: GTTGAAGAGCTGCATCAACAAAGATGTTGCTGGCAG...TTTACTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR GCA 72 bp | AAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTaGTTGCCCACTGAAGAATCTTCTGAACTCAAGAGC | + |
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Preference number: 3 (lower is better) Translates to: KQHLYGAFSILN*LPTEESSELKS Trigger: GCTCTTGAGTTCAGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGAACTCAGCAAAGCTTTTCTTGTaGCATCCAAATGATACAGCC | + |
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Preference number: 3 (lower is better) Translates to: MEPFQFSTACPLKNLLNSAKLFL*HPNDTA Trigger: GGCTGTATCATTTGGATGCAACAAGAAAAGCTTTGC...TGAGTTCAGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| 3UTR-3UTR CAA 90 bp | TTTTTAGATGAGCAAAGCCACCAGAGTCCTCTTGTATTTGTTAAAGTCTTAAGCCTTTTAGGCCCAAACTaGGTAAAAAGAGAACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: FLDEQSHQSPLVFVKVLSLLGPN*VKRELE Trigger: CTCAAGTTCTCTTTTTACCAAGTTTGGGCCTAAAAG...GCTTAAGACTTTAACAAATACAAGAGGACTCTGGTGGCTTTGCTCATCTAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | TGCCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACCCATCGTACAGAGCTaGCTCTTGATGCCCATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CPLKNLLNSRALNIICQQPIVQS*LLMPII Trigger: GATGATGGGCATCAAGAGTCAGCTCTGTACGATGGG...TTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | CCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACATACAGAGCTGACTCTTaGTGCCCATCATCCATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PTEESSELKSPEHYLPATYRADS*CPSSMA Trigger: TGCCATGGATGATGGGCATCAAGAGTCAGCTCTGTA...TGTTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | ACATTATCTGCCAGCAACATCTTTGTTGATGCAGCTCTTCAACTTTTAGGCCCAAGGTTGAAGGGTGTCTaGGTCAGCAGGAACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: TLSASNIFVDAALQLLGPRLKGV*VSRNTA Trigger: GGCTGTGTTCCTGCTGACCCAGACACCCTTCAACCT...TGGGCCTAAAAGTTGAAGAGCTGCATCAACAAAGATGTTGCTGGCAGATAATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | ATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGAACTCAAGGTTGAAGGGTGTCTaGGTCAGCAGGAACACAGCC | + |
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Preference number: 4 (lower is better) Translates to: MEPFQFSTACPLKNLLNSRLKGV*VSRNTA Trigger: GGCTGTGTTCCTGCTGACCCAGACACCCTTCAACCT...TGAGTTCAGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | ACATTATCTGCCAGCAACATCTTTGTTGATGCAGCTCTTCAACTTTTAGGCCCACCCATCGTACAGAGCTaGCTCTTGATGCCCATCATC | + |
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Preference number: 4 (lower is better) Translates to: TLSASNIFVDAALQLLGPPIVQS*LLMPII Trigger: GATGATGGGCATCAAGAGTCAGCTCTGTACGATGGG...TGGGCCTAAAAGTTGAAGAGCTGCATCAACAAAGATGTTGCTGGCAGATAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR GCA 90 bp | AAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAAAGACCCACTCATAGGTaGCTGCATAGGCCCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: KQHLYGAFSILNCLPTEERPTHR*LHRPKR Trigger: CCTTTTGGGCCTATGCAGGCACCTATGAGTGGGTCT...TTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAAAAGGCCTTGGTAGCCTaGACCACTACAATGAAACGA | + |
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Preference number: 4 (lower is better) Translates to: CPLKNLLNSRALNIICQQKALVA*TTTMKR Trigger: TCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTT...TTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | CCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACAAATCATAGTGAGCAATaGCAGGAAGAACCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: PTEESSELKSPEHYLPATNHSEQ*QEEPQS Trigger: ACTCTGGGGTTCTTCCTGCCATTGCTCACTATGATT...TGTTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAAAATCATAGTGAGCAATaGCAGGAAGAACCCCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: CPLKNLLNSRALNIICQQNHSEQ*QEEPQS Trigger: ACTCTGGGGTTCTTCCTGCCATTGCTCACTATGATT...TTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | TGCCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAAATTGGAACATACTGGTaGTCTCTACATTGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CPLKNLLNSRALNIICQQIGTYW*SLHCGR Trigger: CCTCCCACAATGTAGAGACCACCAGTATGTTCCAAT...TTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | TCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTAAATTAACATGGCAAGGTTaGAGGGTGTCTGGGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SGLFSVPYCCTLQDNSSKLTWQG*RVSGSA Trigger: TGCTGACCCAGACACCCTTCAACCTTGCCATGTTAA...TTTACTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | GAGAACTTGAGATCTCTAGAGTTAACCGTCATGACCTTGATTTCAGCATTCTTGAGACTTCCATTGACTTaGGACTCCCAGGTGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: ENLRSLELTVMTLISAFLRLPLT*DSQVRE Trigger: CTCTCTCACCTGGGAGTCTCAAGTCAATGGAAGTCT...CAAGAATGCTGAAATCAAGGTCATGACGGTTAACTCTAGAGATCTCAAGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTAGACTTCCATTGACTTaGGACTCCCAGGTGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: HLYGAFSILNCLPTEESSRLPLT*DSQVRE Trigger: CTCTCTCACCTGGGAGTCTCAAGTCAATGGAAGTCT...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | CCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGAACTCAAGAGCCGCCATAGATGATCTGTaGCAAAGAAACCAACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PFQFSTACPLKNLLNSRAAIDDL*QRNQQG Trigger: TCCCTGTTGGTTTCTTTGCCACAGATCATCTATGGC...GGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | TCAAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGGCCATAGATGATCTGTaGCAAAGAAACCAACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SSSICMEPFQFSTACPLKAIDDL*QRNQQG Trigger: TCCCTGTTGGTTTCTTTGCCACAGATCATCTATGGC...CTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | TCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTAAAGATGCCCATCATCCATaGCATCTGTTGGGGCAAACA | + |
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Preference number: 4 (lower is better) Translates to: SGLFSVPYCCTLQDNSSKDAHHP*HLLGQT Trigger: TGTTTGCCCCAACAGATGCCATGGATGATGGGCATC...TTTACTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000216072.2 |
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| 3UTR CAA 72 bp | CAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTaGCCCACTGAAGAATCTTCTGAACTCAAGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QHLYGAFSILNC*PTEESSELKSP Trigger: AGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGAAGAGTTTTGCACATaGCTGTGCCAAAGACCCACT | + |
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Preference number: 4 (lower is better) Translates to: HLYGAFSILNCLPTEESSEEFCT*LCQRPT Trigger: AGTGGGTCTTTGGCACAGTCATGTGCAAAACTCTTC...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | ATATCTGAGAAGTTTTGTGTACCAGCCATGGTGTTCAGTGACTTCTCCATGATAAAGGCCTTGGTAGCCTaGACCACTACAATGAAACGA | + |
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Preference number: 4 (lower is better) Translates to: ISEKFCVPAMVFSDFSMIKALVA*TTTMKR Trigger: TCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTT...TATCATGGAGAAGTCACTGAACACCATGGCTGGTACACAAAACTTCTCAGATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | TTATTCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGGTGGTCTCTACATTGTaGGAGGCAGAACAAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LFWPVFSPILLHFTRQFQVVSTL*EAEQVL Trigger: CAAGACTTGTTCTGCCTCCCACAATGTAGAGACCAC...CTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGTGGTCTCTACATTGTaGGAGGCAGAACAAGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HLYGAFSILNCLPTEESSVVSTL*EAEQVL Trigger: CAAGACTTGTTCTGCCTCCCACAATGTAGAGACCAC...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | AAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAAAAGCGTTTGTTCTCCTaGCTGTTATCACTGGAATTG | + |
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Preference number: 4 (lower is better) Translates to: KQHLYGAFSILNCLPTEEKRLFS*LLSLEL Trigger: CAATTCCAGTGATAACAGCCAGGAGAACAAACGCTT...TTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CCA 90 bp | ATATCTGAGAAGTTTTGTGTACCAGCCATGGTGTTCAGTGACTTCTCCATGATAATTGGAACATACTGGTaGTCTCTACATTGTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: ISEKFCVPAMVFSDFSMIIGTYW*SLHCGR Trigger: CCTCCCACAATGTAGAGACCACCAGTATGTTCCAAT...TATCATGGAGAAGTCACTGAACACCATGGCTGGTACACAAAACTTCTCAGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | TCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTAAAGCAAAAAGACCTCCTTaGACTTTAGGAAGCGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SGLFSVPYCCTLQDNSSKAKRPP*TLGSVC Trigger: ACAAACGCTTCCTAAAGTTCAAGGAGGTCTTTTTGC...TTTACTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGCAAAAAGACCTCCTTaGACTTTAGGAAGCGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: HLYGAFSILNCLPTEESSAKRPP*TLGSVC Trigger: ACAAACGCTTCCTAAAGTTCAAGGAGGTCTTTTTGC...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | TCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTAAAGGTCTTGATAATGCCTaGGTAGCACAGAATCATAGT | + |
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Preference number: 4 (lower is better) Translates to: SGLFSVPYCCTLQDNSSKGLDNA*VAQNHS Trigger: ACTATGATTCTGTGCTACTCAGGCATTATCAAGACC...TTTACTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGGTCTTGATAATGCCTaGGTAGCACAGAATCATAGT | + |
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Preference number: 4 (lower is better) Translates to: HLYGAFSILNCLPTEESSGLDNA*VAQNHS Trigger: ACTATGATTCTGTGCTACTCAGGCATTATCAAGACC...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | AAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAACCACTACAAGGAAGATaGTCTTTAGAGATTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQHLYGAFSILNCLPTEEPLQGR*SLEICA Trigger: AGCACAAATCTCTAAAGATCATCTTCCTTGTAGTGG...TTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTTTAGGCCCAAACTTGGTAAAAAGAGAACTTGAGATCTCTAGAGTTAACAGCAAGCAAATGACTTaGCCCCAGATCTTCCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: QLLGPNLVKRELEISRVNSKQMT*PQIFHL Trigger: TAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCT...GTTAACTCTAGAGATCTCAAGTTCTCTTTTTACCAAGTTTGGGCCTAAAAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| 3UTR CAA 72 bp | GAGAACTTGAGATCTCTAGAGTTAACCGTCATGACCTaGATTTCAGCATTCTTGAGGATGAAAGAGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENLRSLELTVMT*ISAFLRMKERK Trigger: CTTTCTCTCTTTCATCCTCAAGAATGCTGAAATCAAGGTCATGACGGTTAACTCTAGAGATCTCAAGTTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR TCA 90 bp | CTTCTCCATGATACTCCACATGCTATAAGCAAAGCTTTTCTTGTTGCATCCAAACCACTACAAGGAAGATaGTCTTTAGAGATTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLHDTPHAISKAFLVASKPLQGR*SLEICA Trigger: AGCACAAATCTCTAAAGATCATCTTCCTTGTAGTGG...TTTGGATGCAACAAGAAAAGCTTTGCTTATAGCATGTGGAGTATCATGGAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR GCA 90 bp | TTATTCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGATCTTTAGAGATTTGTaGTTCTGGAAGTTTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFWPVFSPILLHFTRQFQIFRDL*FWKFRA Trigger: TGCTCGAAACTTCCAGAAGCACAAATCTCTAAAGAT...CTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR CCA 90 bp | CAACTTTTAGGCCCAAACTTGGTAAAAAGAGAACTTGAGATCTCTAGAGTTAACAAGCGTTTGTTCTCCTaGCTGTTATCACTGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: QLLGPNLVKRELEISRVNKRLFS*LLSLEL Trigger: CAATTCCAGTGATAACAGCCAGGAGAACAAACGCTT...GTTAACTCTAGAGATCTCAAGTTCTCTTTTTACCAAGTTTGGGCCTAAAAGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCATGATACTCCACATGCTATAAGCAAAGCTTTTCTTGTTGCATCCAAAATCTTTAGAGATTTGTaGTTCTGGAAGTTTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLHDTPHAISKAFLVASKIFRDL*FWKFRA Trigger: TGCTCGAAACTTCCAGAAGCACAAATCTCTAAAGAT...TTTGGATGCAACAAGAAAAGCTTTGCTTATAGCATGTGGAGTATCATGGAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| 3UTR CAA 72 bp | TTTGTTGATGCAGCTCTTCAACTTTTAGGCCCAAACTaGGTAAAAAGAGAACTTGAGATCTCTAGAGTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FVDAALQLLGPN*VKRELEISRVN Trigger: GTTAACTCTAGAGATCTCAAGTTCTCTTTTTACCAAGTTTGGGCCTAAAAGTTGAAGAGCTGCATCAACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CCA 90 bp | CCCCAGATCTTCCACTTAGCCTGCCGGTTGAAGGCCTTGGTAGCCTaGACCACTACAATGAAACGATCCACTGTGATGCAGGTGAGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQIFHLACRLKALVA*TTTMKRSTVMQVRV Trigger: CACTCTCACCTGCATCACAGTGGATCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS TCA 90 bp | GTTGAAGAGCCAGAAATCTCCCTCGTAGTGCCCATCGTACAGAGCTaGCTCTTGATGCCCATCATCCATGGCATCTGTTGGGGCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VEEPEISLVVPIVQS*LLMPIIHGICWGKH Trigger: ATGTTTGCCCCAACAGATGCCATGGATGATGGGCATCAAGAGTCAGCTCTGTACGATGGGCACTACGAGGGAGATTTCTGGCTCTTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216072.2 |
||
| CDS GCA 90 bp | CAAATGAGCAAGCAAATGACTTGGCCCCAGATCTTCCACTTAGCCTaGCGGTTGAAGGCCTTGGTAGCCTGGACCACTACAATGAAACGA | + |
|
Preference number: 5 (lower is better) Translates to: QMSKQMTWPQIFHLA*RLKALVAWTTTMKR Trigger: TCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCTCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CCA 90 bp | AAAGAAACCAACAGGGAGACCACCCAAATGAGCAAGCAAATGACTTaGCCCCAGATCTTCCACTTAGCCTGCCGGTTGAAGGCCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: KETNRETTQMSKQMT*PQIFHLACRLKALV Trigger: TACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCTCATTTGGGTGGTCTCCCTGTTGGTTTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CCA 90 bp | GGAACATACTGGTGGTCTCTACATTGTGGGAGGCAGAACAAGTCTTaGAACTGTCCTCAGAAGACTTCCATTGACTTGAGACTCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTYWWSLHCGRQNKS*NCPQKTSIDLRLPG Trigger: ACCTGGGAGTCTCAAGTCAATGGAAGTCTTCTGAGGACAGTTCCAAGACTTGTTCTGCCTCCCACAATGTAGAGACCACCAGTATGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACACTGGTGGTCTCTACATaGTGGGAGGCAGAACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTEESSELKSPEHYLPATLVVST*WEAEQV Trigger: GACTTGTTCTGCCTCCCACAATGTAGAGACCACCAG...TGTTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS TCA 90 bp | GTGCTTCTGGAAGTTTCGAGCATGAAGCAAGGTCTTGATAATGCCTaGGTAGCACAGAATCATAGTGAGCAATGGCAGGAAGAACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLEVSSMKQGLDNA*VAQNHSEQWQEEPQ Trigger: CTGGGGTTCTTCCTGCCATTGCTCACTATGATTCTGTGCTACTCAGGCATTATCAAGACCTTGCTTCATGCTCGAAACTTCCAGAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS TCA 90 bp | TGGTATAGTACTCCCAGCTTGTACTTTGGATTAACATGGCAAGGTTaGAGGGTGTCTGGGTCAGCAGGAACACAGCCACTACAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: WYSTPSLYFGLTWQG*RVSGSAGTQPLQGR Trigger: TCTTCCTTGTAGTGGCTGTGTTCCTGCTGACCCAGACACCCTTCAACCTTGCCATGTTAATCCAAAGTACAAGCTGGGAGTACTATACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CAA 90 bp | CCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTGAACTCAAGAGCCATTAACATGGCAAGGTaGAAGGGTGTCTGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFQFSTACPLKNLLNSRAINMAR*KGVWVS Trigger: GCTGACCCAGACACCCTTCAACCTTGCCATGTTAAT...GGCTCTTGAGTTCAGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS TCA 90 bp | CAAAGACAAACACTACCAGGTACACACAGGGCAAAAAGACCTCCTTaGACTTTAGGAAGCGTTTGTTCTCCTGGCTGTTATCACTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRQTLPGTHRAKRPP*TLGSVCSPGCYHWN Trigger: ATTCCAGTGATAACAGCCAGGAGAACAAACGCTTCCTAAAGTTCAAGGAGGTCTTTTTGCCCTGTGTGTACCTGGTAGTGTTTGTCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS GCA 90 bp | GCCAACAAAGGCATAAAGTACAGGGTTAAGGCAAGCCCGAAAGTATaGTATAGCCTCTGTCACTACGATGGCATACTTAAAGCTGGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: ANKGIKYRVKASPKV*YSLCHYDGILKAGY Trigger: ATAACCAGCTTTAAGTATGCCATCGTAGTGACAGAGGCTATAGCATACTTTCGGGCTTGCCTTAACCCTGTACTTTATGCCTTTGTTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR CAA 90 bp | CCCACTGAAGAATCTTCTGAACTCAAGAGCCCTGAACATTATCTGCCAGCAACAAACTTTAGGAAGCGTTaGTTCTCCTGGCTGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: PTEESSELKSPEHYLPATNFRKR*FSWLLS Trigger: TGATAACAGCCAGGAGAACAAACGCTTCCTAAAGTT...TGTTGCTGGCAGATAATGTTCAGGGCTCTTGAGTTCAGAAGATTCTTCAGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAAAAGACTTCCATTGACTaGAGACTCCCAGGTGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KQHLYGAFSILNCLPTEEKTSID*RLPGER Trigger: TCTCTCACCTGGGAGTCTCAAGTCAATGGAAGTCTT...TTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATGCTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTCCATGATACTCCACATGCTATAAGCAAAGCTTTTCTTGTTGCATCCAAAATTAACATGGCAAGGTaGAAGGGTGTCTGGGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLHDTPHAISKAFLVASKINMAR*KGVWVS Trigger: GCTGACCCAGACACCCTTCAACCTTGCCATGTTAAT...TTTGGATGCAACAAGAAAAGCTTTGCTTATAGCATGTGGAGTATCATGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CAA 90 bp | CAACTTTTAGGCCCAAACTTGGTAAAAAGAGAACTTGAGATCTCTAGAGTTAACCTGGTGGTCTCTACATaGTGGGAGGCAGAACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLLGPNLVKRELEISRVNLVVST*WEAEQV Trigger: GACTTGTTCTGCCTCCCACAATGTAGAGACCACCAG...GTTAACTCTAGAGATCTCAAGTTCTCTTTTTACCAAGTTTGGGCCTAAAAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CCA 90 bp | ACAGATAAGCTTGTCAATATCTTGAACATGGCCATAGATGATCTGTaGCAAAGAAACCAACAGGGAGACCACCCAAATGAGCAAGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TDKLVNILNMAIDDL*QRNQQGDHPNEQAN Trigger: ATTTGCTTGCTCATTTGGGTGGTCTCCCTGTTGGTTTCTTTGCCACAGATCATCTATGGCCATGTTCAAGATATTGACAAGCTTATCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CAA 90 bp | CATTTGTATGGAGCCTTTTCAATTCTCAACTGCTTGCCCACTGAAGAATCTTCTTTATCACTGGAATTGTaGAAGAGCCAGAAATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLYGAFSILNCLPTEESSLSLEL*KSQKSP Trigger: GGGAGATTTCTGGCTCTTCAACAATTCCAGTGATAA...AGAAGATTCTTCAGTGGGCAAGCAGTTGAGAATTGAAAAGGCTCCATACAAATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CAA 90 bp | TCTGGCCTGTTTTCAGTCCCATATTGCTGCACTTTACAAGACAATTCCAGTAAAAACTTTAGGAAGCGTTaGTTCTCCTGGCTGTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLFSVPYCCTLQDNSSKNFRKR*FSWLLS Trigger: TGATAACAGCCAGGAGAACAAACGCTTCCTAAAGTT...TTTACTGGAATTGTCTTGTAAAGTGCAGCAATATGGGACTGAAAACAGGCCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CAA 90 bp | CTTCTCCATGATACTCCACATGCTATAAGCAAAGCTTTTCTTGTTGCATCCAAATTATCACTGGAATTGTaGAAGAGCCAGAAATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLHDTPHAISKAFLVASKLSLEL*KSQKSP Trigger: GGGAGATTTCTGGCTCTTCAACAATTCCAGTGATAA...TTTGGATGCAACAAGAAAAGCTTTGCTTATAGCATGTGGAGTATCATGGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS-3UTR CAA 90 bp | TTTTTAGATGAGCAAAGCCACCAGAGTCCTCTTGTATTTGTTAAAGTCTTAAGCGGCAAAAAGACCTCCTaGAACTTTAGGAAGCGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLDEQSHQSPLVFVKVLSGKKTS*NFRKRL Trigger: CAAACGCTTCCTAAAGTTCAAGGAGGTCTTTTTGCC...GCTTAAGACTTTAACAAATACAAGAGGACTCTGGTGGCTTTGCTCATCTAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CAA 72 bp | CCCCAGATCTTCCACTTAGCCTGCCGGTTGAAGGCCTaGGTAGCCTGGACCACTACAATGAAACGATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: PQIFHLACRLKA*VAWTTTMKRST Trigger: AGTGGATCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CAA 90 bp | ATGACTTGGCCCCAGATCTTCCACTTAGCCTGCCGGTTGAAGGCCTaGGTAGCCTGGACCACTACAATGAAACGATCCACTGTGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MTWPQIFHLACRLKA*VAWTTTMKRSTVMQ Trigger: CTGCATCACAGTGGATCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS TCA 72 bp | CCAGAAATCTCCCTCGTAGTGCCCATCGTACAGAGCTaGCTCTTGATGCCCATCATCCATGGCATCTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: PEISLVVPIVQS*LLMPIIHGICW Trigger: CCAACAGATGCCATGGATGATGGGCATCAAGAGTCAGCTCTGTACGATGGGCACTACGAGGGAGATTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216072.2 |
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| CDS CCA 72 bp | TTCCACTTAGCCTGCCGGTTGAAGGCCTTGGTAGCCTaGACCACTACAATGAAACGATCCACTGTGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FHLACRLKALVA*TTTMKRSTVMQ Trigger: CTGCATCACAGTGGATCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CCA 72 bp | AACAGGGAGACCACCCAAATGAGCAAGCAAATGACTTaGCCCCAGATCTTCCACTTAGCCTGCCGGTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: NRETTQMSKQMT*PQIFHLACRLK Trigger: CTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCTCATTTGGGTGGTCTCCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CAA 72 bp | ATGACTTGGCCCCAGATCTTCCACTTAGCCTGCCGGTaGAAGGCCTTGGTAGCCTGGACCACTACAATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MTWPQIFHLACR*KALVAWTTTMK Trigger: TTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CAA 72 bp | CAACAGGGAGACCACCCAAATGAGCAAGCAAATGACTaGGCCCCAGATCTTCCACTTAGCCTGCCGGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QQGDHPNEQAND*APDLPLSLPVE Trigger: TTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCTCATTTGGGTGGTCTCCCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CAA 90 bp | AGCAAGCAAATGACTTGGCCCCAGATCTTCCACTTAGCCTGCCGGTaGAAGGCCTTGGTAGCCTGGACCACTACAATGAAACGATCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SKQMTWPQIFHLACR*KALVAWTTTMKRST Trigger: AGTGGATCGTTTCATTGTAGTGGTCCAGGCTACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CAA 90 bp | CAAAGAAACCAACAGGGAGACCACCCAAATGAGCAAGCAAATGACTaGGCCCCAGATCTTCCACTTAGCCTGCCGGTTGAAGGCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QRNQQGDHPNEQAND*APDLPLSLPVEGLG Trigger: ACCAAGGCCTTCAACCGGCAGGCTAAGTGGAAGATCTGGGGCCAAGTCATTTGCTTGCTCATTTGGGTGGTCTCCCTGTTGGTTTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS TCA 72 bp | ACTCCCAGCTTGTACTTTGGATTAACATGGCAAGGTTaGAGGGTGTCTGGGTCAGCAGGAACACAGCCACTA | + |
|
Preference number: 6 (lower is better) Translates to: TPSLYFGLTWQG*RVSGSAGTQPL Trigger: TAGTGGCTGTGTTCCTGCTGACCCAGACACCCTTCAACCTTGCCATGTTAATCCAAAGTACAAGCTGGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CAA 72 bp | TACTCCCAGCTTGTACTTTGGATTAACATGGCAAGGTaGAAGGGTGTCTGGGTCAGCAGGAACACAGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: YSQLVLWINMAR*KGVWVSRNTAT Trigger: AGTGGCTGTGTTCCTGCTGACCCAGACACCCTTCAACCTTGCCATGTTAATCCAAAGTACAAGCTGGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CAA 72 bp | AAGTCTTGGAACTGTCCTCAGAAGACTTCCATTGACTaGAGACTCCCAGGTGAGAGAGGCAGCCGATATCCT | + |
|
Preference number: 6 (lower is better) Translates to: KSWNCPQKTSID*RLPGERGSRYP Trigger: AGGATATCGGCTGCCTCTCTCACCTGGGAGTCTCAAGTCAATGGAAGTCTTCTGAGGACAGTTCCAAGACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CCA 72 bp | TGGTGGTCTCTACATTGTGGGAGGCAGAACAAGTCTTaGAACTGTCCTCAGAAGACTTCCATTGACTTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: WWSLHCGRQNKS*NCPQKTSIDLR Trigger: TCTCAAGTCAATGGAAGTCTTCTGAGGACAGTTCCAAGACTTGTTCTGCCTCCCACAATGTAGAGACCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CAA 90 bp | CCAAAGACAAACACTACCAGGTACACACAGGGCAAAAAGACCTCCTaGAACTTTAGGAAGCGTTTGTTCTCCTGGCTGTTATCACTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: PKTNTTRYTQGKKTS*NFRKRLFSWLLSLE Trigger: TTCCAGTGATAACAGCCAGGAGAACAAACGCTTCCTAAAGTTCAAGGAGGTCTTTTTGCCCTGTGTGTACCTGGTAGTGTTTGTCTTTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS TCA 72 bp | TCTGGGTCAGCAGGAACACAGCCACTACAAGGAAGATaGTCTTTAGAGATTTGTGCTTCTGGAAGTTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGSAGTQPLQGR*SLEICASGSFE Trigger: CTCGAAACTTCCAGAAGCACAAATCTCTAAAGATCATCTTCCTTGTAGTGGCTGTGTTCCTGCTGACCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CAA 90 bp | AGGTACACACAGGGCAAAAAGACCTCCTTGAACTTTAGGAAGCGTTaGTTCTCCTGGCTGTTATCACTGGAATTGTTGAAGAGCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RYTQGKKTSLNFRKR*FSWLLSLELLKSQK Trigger: TTTCTGGCTCTTCAACAATTCCAGTGATAACAGCCAGGAGAACAAACGCTTCCTAAAGTTCAAGGAGGTCTTTTTGCCCTGTGTGTACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS TCA 72 bp | GAAGTTTCGAGCATGAAGCAAGGTCTTGATAATGCCTaGGTAGCACAGAATCATAGTGAGCAATGGCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EVSSMKQGLDNA*VAQNHSEQWQE Trigger: TTCCTGCCATTGCTCACTATGATTCTGTGCTACTCAGGCATTATCAAGACCTTGCTTCATGCTCGAAACTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
||
| CDS CCA 72 bp | CTTGTCAATATCTTGAACATGGCCATAGATGATCTGTaGCAAAGAAACCAACAGGGAGACCACCCAAATGAG | + |
|
Preference number: 6 (lower is better) Translates to: LVNILNMAIDDL*QRNQQGDHPNE Trigger: CTCATTTGGGTGGTCTCCCTGTTGGTTTCTTTGCCACAGATCATCTATGGCCATGTTCAAGATATTGACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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| CDS CCA 72 bp | AAGACCTCCTTGAACTTTAGGAAGCGTTTGTTCTCCTaGCTGTTATCACTGGAATTGTTGAAGAGCCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: KTSLNFRKRLFS*LLSLELLKSQK Trigger: TTTCTGGCTCTTCAACAATTCCAGTGATAACAGCCAGGAGAACAAACGCTTCCTAAAGTTCAAGGAGGTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049810.9 ENSMUST00000216072.2 |
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