Pregenerated sensors for CXCL16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018920Ensembl transcript IDs: ENSMUST00000019064.9, ENSMUST00000126391.2
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGTTGTGGGCCACCATGTGAGTCCTTTAGAGTCTTGAACAATATCTaGAACCTGTTGACTTATCTCTCCAGCCCTCAGCCAATTGGTCTA | + |
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Preference number: 1 (lower is better) Translates to: GCGPPCESFRVLNNI*NLLTYLSSPQPIGL Trigger: TAGACCAATTGGCTGAGGGCTGGAGAGATAAGTCAACAGGTTTCAGATATTGTTCAAGACTCTAAAGGACTCACATGGTGGCCCACAACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| 3UTR CCA 90 bp | TTGTTATTGTATGTATATGTGTACCACGTATATAAATGGTGTCTGTaGAGGTCAGAGGGGGTTGTCAAGTCCCCAGGAACCGGAGTTGCG | + |
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Preference number: 1 (lower is better) Translates to: LLLYVYVYHVYKWCL*RSEGVVKSPGTGVA Trigger: CGCAACTCCGGTTCCTGGGGACTTGACAACCCCCTCTGACCTCCACAGACACCATTTATATACGTGGTACACATATACATACAATAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGACCTAGGGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTGGGGATCAGCATGAGAAACAGTaGGCTCAGGTTCCATTCACT | + |
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Preference number: 2 (lower is better) Translates to: GDLGIRSHIHREGWRPGDQHEKQ*AQVPFT Trigger: AGTGAATGGAACCTGAGCTCACTGTTTCTCATGCTG...ATCCCCAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCCCTAGGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| 3UTR-3UTR TCA 90 bp | AACTTTACACATGCTAAGCAGGCACTGTACCTTGGGACTGCACTTTTGAACCACATCATCCATCTCTCATaGGCTTCCACTCTTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: NFTHAKQALYLGTALLNHIIHLS*ASTLAV Trigger: TACAGCAAGAGTGGAAGCTCATGAGAGATGGATGAT...GTGGTTCAAAAGTGCAGTCCCAAGGTACAGTGCCTGCTTAGCATGTGTAAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTAGGGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTAGGGATACGAACCTAGGTTCCATATaGATACTTTGTCTCAAGACA | + |
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Preference number: 2 (lower is better) Translates to: DLGIRSHIHREGWRPRDTNLGSI*ILCLKT Trigger: TGTCTTGAGACAAAGTATCCATATGGAACCTAGGTT...CGTATCCCTAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCCCTAGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGATCATCCATCTCTCATaGGCTTCCACTCTTGCTGTA | + |
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Preference number: 2 (lower is better) Translates to: GTALLNHVFECYILLDVGIIHLS*ASTLAV Trigger: TACAGCAAGAGTGGAAGCTCATGAGAGATGGATGAT...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACACACAGCATGAGAAACAGTaGGCTCAGGTTCCATTCACT | + |
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Preference number: 2 (lower is better) Translates to: TLFKIDLVVGGLNLELYTQHEKQ*AQVPFT Trigger: AGTGAATGGAACCTGAGCTCACTGTTTCTCATGCTG...TGTGTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| 3UTR-3UTR TCA 90 bp | ACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACACATGTCTCAAGACAGCATaGGAAACAGTGAGCTCAGGT | + |
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Preference number: 2 (lower is better) Translates to: TLFKIDLVVGGLNLELYTCLKTA*ETVSSG Trigger: ACCTGAGCTCACTGTTTCTCATGCTGTCTTGAGACA...TGTGTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| 3UTR CCA 72 bp | TATGTATATGTGTACCACGTATATAAATGGTGTCTGTaGAGGTCAGAGGGGGTTGTCAAGTCCCCAGGAACC | + |
|
Preference number: 3 (lower is better) Translates to: YVYVYHVYKWCL*RSEGVVKSPGT Trigger: GGTTCCTGGGGACTTGACAACCCCCTCTGACCTCCACAGACACCATTTATATACGTGGTACACATATACATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| 3UTR TCA 72 bp | TATGGATACTTTGTCTCAAGACAGCATGAGAAACAGTaGGCTCAGGTTCCATTCACTGATGGAGACGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: YGYFVSRQHEKQ*AQVPFTDGDEP Trigger: AGGCTCGTCTCCATCAGTGAATGGAACCTGAGCTCACTGTTTCTCATGCTGTCTTGAGACAAAGTATCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| 3UTR-3UTR CAA 90 bp | GGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTGGGGATACATAGTCATTTCCATATGGATACTTaGTCTCAAGACAGCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GYVVIYTGKAGDLGIHSHFHMDT*SQDSMR Trigger: TCTCATGCTGTCTTGAGACAAAGTATCCATATGGAA...ATGACTATGTATCCCCAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| 3UTR-3UTR CAA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGTTCCATATGGATACTTaGTCTCAAGACAGCATGAGA | + |
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Preference number: 3 (lower is better) Translates to: GTALLNHVFECYILLDVGFHMDT*SQDSMR Trigger: TCTCATGCTGTCTTGAGACAAAGTATCCATATGGAA...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | AGACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGCGAAGGTGTCCCCTCTaGGGCCTCAGGGGTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: RRACCPTTSPMSSSISHERRCPL*GLRGLG Trigger: ACCCAGACCCCTGAGGCCGCAGAGGGGACACCTTCG...CTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | CCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGCTTCCACCGGACCCACTGGTCTTaGCTTCCCCCACACACGCTT | + |
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Preference number: 4 (lower is better) Translates to: PAALPPLPCHHPSLMSFHRTHWS*LPPHTL Trigger: AAGCGTGTGTGGGGGAAGCCAAGACCAGTGGGTCCG...GTGGAAGCTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | TTCACTGATGGAGACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCACACCGGTACCCAAGCTaGTGTGCTAGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FTDGDEPAALPPLPCHHPHRYPS*CASSSS Trigger: GGAGCTGGAGCTAGCACACCAGCTTGGGTACCGGTG...TGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCTCCATCAGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTGGGAGGGTTGAACCTAGAACTTTACACATGCTAAGCAGGCACTGTACCCCAGCGACACTGCCCTaGTTGCCATCGCCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GSGRVEPRTLHMLSRHCTPATLP*LPSPGR Trigger: CCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGG...GGTACAGTGCCTGCTTAGCATGTGTAAAGTTCTAGGTTCAACCCTCCCACTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | GGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTGGGGATACATAGTCATCCAGCGACACTGCCCTaGTTGCCATCGCCTGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GYVVIYTGKAGDLGIHSHPATLP*LPSPGR Trigger: CCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGG...ATGACTATGTATCCCCAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR CCA 90 bp | GACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGCCTCCTGATGGAAGAGTaGAGTGCTGAGTGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: DEPAALPPLPCHHPSLMSLLMEE*SAECSD Trigger: GTCAGAGCACTCAGCACTCCACTCTTCCATCAGGAG...GCTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | ATGAGAAACAGTGAGCTCAGGTTCCATTCACTGATGGAGACGAGCCTGCTGCCCAGCCTGAAGGGAGAGTaGTCATCTCCCAGGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: MRNSELRFHSLMETSLLPSLKGE*SSPRVG Trigger: CCCAACCCTGGGAGATGACCACTCTCCCTTCAGGCT...GGGCAGCAGGCTCGTCTCCATCAGTGAATGGAACCTGAGCTCACTGTTTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | GACCTGGGGATACATAGTCATATACACAGGGAAGGCTGGAGACCTAGGGATACGCACCGGTACCCAAGCTaGTGTGCTAGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DLGIHSHIHREGWRPRDTHRYPS*CASSSS Trigger: GGAGCTGGAGCTAGCACACCAGCTTGGGTACCGGTG...CGTATCCCTAGGTCTCCAGCCTTCCCTGTGTATATGACTATGTATCCCCAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR CCA 90 bp | GGTAGTGGGAGGGTTGAACCTAGAACTTTACACATGCTAAGCAGGCACTGTACCCGGACCCACTGGTCTTaGCTTCCCCCACACACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GSGRVEPRTLHMLSRHCTRTHWS*LPPHTL Trigger: AAGCGTGTGTGGGGGAAGCCAAGACCAGTGGGTCCG...GGTACAGTGCCTGCTTAGCATGTGTAAAGTTCTAGGTTCAACCCTCCCACTACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAAACAGTGAGCTCAGGTTCCATTCACTGATGGAGACGAGCCTGCTGCCCTTCCAGACCATAGCCTaGAGGGAGAGTGGTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: MRNSELRFHSLMETSLLPFQTIA*RESGHL Trigger: GAGATGACCACTCTCCCTTCAGGCTATGGTCTGGAA...GGGCAGCAGGCTCGTCTCCATCAGTGAATGGAACCTGAGCTCACTGTTTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | CCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGCTTCCACGCTCCTGGTGCTTCTTaGTGTCTGTCATCTTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: PAALPPLPCHHPSLMSFHAPGAS*CLSSCC Trigger: ACAGCAAGATGACAGACAGCAAGAAGCACCAGGAGC...GTGGAAGCTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | CCAACACTGCAGAGGCAGGCAGATCTTCTGAGTTTTAGGACTGTCAGGGCTGAACCAGAGCTGCAAACCTaGAGAGTTCTGCTGTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: PTLQRQADLLSFRTVRAEPELQT*RVLLCR Trigger: GCGACACAGCAGAACTCTGCAGGTTTGCAGCTCTGG...TTCAGCCCTGACAGTCCTAAAACTCAGAAGATCTGCCTGCCTCTGCAGTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | ATGAGAAACAGTGAGCTCAGGTTCCATTCACTGATGGAGACGAGCCTGCTGCCCTTGCTGTTTCTCATTTaGCTCAGCCTCAGGCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: MRNSELRFHSLMETSLLPLLFLI*LSLRPS Trigger: GCTAGGCCTGAGGCTGAGGCAAATGAGAAACAGCAA...GGGCAGCAGGCTCGTCTCCATCAGTGAATGGAACCTGAGCTCACTGTTTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | AGACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGCAGGGGTCTGGGTACTaGCTTGAGGCAAATGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: RRACCPTTSPMSSSISHEQGSGY*LEANVF Trigger: AAAAACATTTGCCTCAAGCCAGTACCCAGACCCCTG...CTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTGGGAGGGTTGAACCTAGAACTTTACACATGCTAAGCAGGCACTGTACCGCTAGCTCCAGCTCCTaGTGCTTCTTGCTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GSGRVEPRTLHMLSRHCTASSSS*CFLLSV Trigger: GACAGACAGCAAGAAGCACCAGGAGCTGGAGCTAGC...GGTACAGTGCCTGCTTAGCATGTGTAAAGTTCTAGGTTCAACCCTCCCACTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | GGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTGGGGATACATAGTCATCCAGAGCTGCAAACCTaGAGAGTTCTGCTGTGTCGC | + |
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Preference number: 4 (lower is better) Translates to: GYVVIYTGKAGDLGIHSHPELQT*RVLLCR Trigger: GCGACACAGCAGAACTCTGCAGGTTTGCAGCTCTGG...ATGACTATGTATCCCCAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR CCA 90 bp | CCAACACTGCAGAGGCAGGCAGATCTTCTGAGTTTTAGGACTGTCAGGGCTGAAGTACCCTGCGGTATCTaGGTGCCAGAAGAAATGGTA | + |
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Preference number: 4 (lower is better) Translates to: PTLQRQADLLSFRTVRAEVPCGI*VPEEMV Trigger: TACCATTTCTTCTGGCACCCAGATACCGCAGGGTAC...TTCAGCCCTGACAGTCCTAAAACTCAGAAGATCTGCCTGCCTCTGCAGTGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | AACTTTACACATGCTAAGCAGGCACTGTACCTTGGGACTGCACTTTTGAACCACGAGTGGAGTGCTGAGTaGTCTGACTATGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: NFTHAKQALYLGTALLNHEWSAE*SDYVQG Trigger: CCCCTGCACATAGTCAGAGCACTCAGCACTCCACTC...GTGGTTCAAAAGTGCAGTCCCAAGGTACAGTGCCTGCTTAGCATGTGTAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | GACCTGGGGATACATAGTCATATACACAGGGAAGGCTGGAGACCTAGGGATACGCAGGGGTCTGGGTACTaGCTTGAGGCAAATGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: DLGIHSHIHREGWRPRDTQGSGY*LEANVF Trigger: AAAAACATTTGCCTCAAGCCAGTACCCAGACCCCTG...CGTATCCCTAGGTCTCCAGCCTTCCCTGTGTATATGACTATGTATCCCCAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR TCA 90 bp | GGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTGGGGATACATAGTCATGTCTGGGTACTGGCTTaGGGCAAATGTTTTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: GYVVIYTGKAGDLGIHSHVWVLA*GKCFWW Trigger: CCACCAAAAACATTTGCCTCAAGCCAGTACCCAGAC...ATGACTATGTATCCCCAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR TCA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGAGGCCATGGCTGCAGTaGGGAAGAAGACAATGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GTALLNHVFECYILLDVGRPWLQ*GRRQWP Trigger: TGGCCATTGTCTTCTTCCTCACTGCAGCCATGGCCT...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | AACTTTACACATGCTAAGCAGGCACTGTACCTTGGGACTGCACTTTTGAACCACGTACCCTGCGGTATCTaGGTGCCAGAAGAAATGGTA | + |
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Preference number: 4 (lower is better) Translates to: NFTHAKQALYLGTALLNHVPCGI*VPEEMV Trigger: TACCATTTCTTCTGGCACCCAGATACCGCAGGGTAC...GTGGTTCAAAAGTGCAGTCCCAAGGTACAGTGCCTGCTTAGCATGTGTAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | AGGTTCCATATGGATACTTTGTCTCAAGACAGCATGAGAAACAGTGAGCTCAGGCTCCTGATGGAAGAGTaGAGTGCTGAGTGCTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: RFHMDTLSQDSMRNSELRLLMEE*SAECSD Trigger: GTCAGAGCACTCAGCACTCCACTCTTCCATCAGGAG...CCTGAGCTCACTGTTTCTCATGCTGTCTTGAGACAAAGTATCCATATGGAACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGTTGCTGTTTCTCATTTaGCTCAGCCTCAGGCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: GTALLNHVFECYILLDVGLLFLI*LSLRPS Trigger: GCTAGGCCTGAGGCTGAGGCAAATGAGAAACAGCAA...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | CATATATTATTAGTTGTAAAGAGTGTTCCCCAAGAGCAGTCCTTTAATCCCAACAGCCTGAAGGGAGAGTaGTCATCTCCCAGGGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: HILLVVKSVPQEQSFNPNSLKGE*SSPRVG Trigger: CCCAACCCTGGGAGATGACCACTCTCCCTTCAGGCT...GTTGGGATTAAAGGACTGCTCTTGGGGAACACTCTTTACAACTAATAATATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | ATATACACAGGGAAGGCTGGAGACCTAGGGATACGTAGTCATATACATAGGGAACACACGCTTTTGGACTaGAACTGGAACCTGATAAAG | + |
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Preference number: 4 (lower is better) Translates to: IYTGKAGDLGIRSHIHREHTLLD*NWNLIK Trigger: CTTTATCAGGTTCCAGTTGCAGTCCAAAAGCGTGTG...TTCCCTATGTATATGACTACGTATCCCTAGGTCTCCAGCCTTCCCTGTGTATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR GCA 90 bp | ACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACACAGAGTGGAGTGCTGAGTaGTCTGACTATGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TLFKIDLVVGGLNLELYTEWSAE*SDYVQG Trigger: CCCCTGCACATAGTCAGAGCACTCAGCACTCCACTC...TGTGTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | ACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACACAGCTAGCTCCAGCTCCTaGTGCTTCTTGCTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TLFKIDLVVGGLNLELYTASSSS*CFLLSV Trigger: GACAGACAGCAAGAAGCACCAGGAGCTGGAGCTAGC...TGTGTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR TCA 90 bp | ACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACACATTCCAGACCATAGCCTaGAGGGAGAGTGGTCATCTC | + |
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Preference number: 4 (lower is better) Translates to: TLFKIDLVVGGLNLELYTFQTIA*RESGHL Trigger: GAGATGACCACTCTCCCTTCAGGCTATGGTCTGGAA...TGTGTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CCA 90 bp | GGTAGTGGGAGGGTTGAACCTAGAACTTTACACATGCTAAGCAGGCACTGTACCGAACCTGATAAAGAATaGACAACGATGAAATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GSGRVEPRTLHMLSRHCTEPDKE*TTMKCF Trigger: AAAGCATTTCATCGTTGTCCATTCTTTATCAGGTTC...GGTACAGTGCCTGCTTAGCATGTGTAAAGTTCTAGGTTCAACCCTCCCACTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR TCA 90 bp | CATATATTATTAGTTGTAAAGAGTGTTCCCCAAGAGCAGTCCTTTAATCCCAACGTCTGGGTACTGGCTTaGGGCAAATGTTTTTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HILLVVKSVPQEQSFNPNVWVLA*GKCFWW Trigger: CCACCAAAAACATTTGCCTCAAGCCAGTACCCAGAC...GTTGGGATTAAAGGACTGCTCTTGGGGAACACTCTTTACAACTAATAATATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| 3UTR CAA 72 bp | CATGCTAAGCAGGCACTGTACCTTGGGACTGCACTTTaGAACCACGTATTTGAGTGTTACATTTTATTAGAC | + |
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Preference number: 4 (lower is better) Translates to: HAKQALYLGTAL*NHVFECYILLD Trigger: GTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCCAAGGTACAGTGCCTGCTTAGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR GCA 90 bp | CAGACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACCACACGCTTTTGGACTaGAACTGGAACCTGATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTLFKIDLVVGGLNLELYHTLLD*NWNLIK Trigger: CTTTATCAGGTTCCAGTTGCAGTCCAAAAGCGTGTG...GTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS TCA 90 bp | GCTGTGTCGCTCTCCTGTTGCACAGCACATAGGCCATGGCTGCAGTaGGGAAGAAGACAATGGCCAGGAGGGACAGCACCGGTACCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVSLSCCTAHRPWLQ*GRRQWPGGTAPVPK Trigger: CTTGGGTACCGGTGCTGTCCCTCCTGGCCATTGTCTTCTTCCTCACTGCAGCCATGGCCTATGTGCTGTGCAACAGGAGAGCGACACAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 90 bp | TGCCAGAAGAAATGGTACGATCACAAGAACAACTTCCAGCGACACTaGCCTGGTTGCCATCGCCTGGCAGGGTCAGCAGCGCCAACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CQKKWYDHKNNFQRH*PGCHRLAGSAAPTR Trigger: TCTTGTTGGCGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATCGTACCATTTCTTCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 90 bp | ACCGGTACCCAAGCTGGTGTGCTAGCTCCAGCTCCTGGTGCTTCTTaGTGTCTGTCATCTTGCTGTTTCTCATTTGCCTCAGCCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TGTQAGVLAPAPGAS*CLSSCCFSFASASG Trigger: GCCTGAGGCTGAGGCAAATGAGAAACAGCAAGATGACAGACAGCAAGAAGCACCAGGAGCTGGAGCTAGCACACCAGCTTGGGTACCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CCA 90 bp | ATCACAAGAACAACTTCCAGCGACACTGCCCTGGTTGCCATCGCCTaGCAGGGTCAGCAGCGCCAACAAGAAAAGGAAGAACGCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ITRTTSSDTALVAIA*QGQQRQQEKEERKR Trigger: TCTCTTGCGTTCTTCCTTTTCTTGTTGGCGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS CCA 90 bp | GAAGAAATGGTACGATCACAAGAACAACTTCCAGCGACACTGCCCTaGTTGCCATCGCCTGGCAGGGTCAGCAGCGCCAACAAGAAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EEMVRSQEQLPATLP*LPSPGRVSSANKKR Trigger: CCTTTTCTTGTTGGCGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATCGTACCATTTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS CCA 90 bp | GTTGGGTGTGCTCTTTGTTTAAGGACAGTGCTCCTGATGGAAGAGTaGAGTGCTGAGTGCTCTGACTATGTGCAGGGGTGCTCGTGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: VGCALCLRTVLLMEE*SAECSDYVQGCSCP Trigger: CGGACACGAGCACCCCTGCACATAGTCAGAGCACTCAGCACTCCACTCTTCCATCAGGAGCACTGTCCTTAAACAAAGAGCACACCCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | AGGTTCCATATGGATACTTTGTCTCAAGACAGCATGAGAAACAGTGAGCTCAGGGCGACACTGCCCTGGTaGCCATCGCCTGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RFHMDTLSQDSMRNSELRATLPW*PSPGRV Trigger: GACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGC...CCTGAGCTCACTGTTTCTCATGCTGTCTTGAGACAAAGTATCCATATGGAACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | GACAGCATGAGAAACAGTGAGCTCAGGTTCCATTCACTGATGGAGACGAGCCTGCCCCCACACACGCTTTaGGACTGCAACTGGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: DSMRNSELRFHSLMETSLPPHTL*DCNWNL Trigger: CAGGTTCCAGTTGCAGTCCAAAAGCGTGTGTGGGGG...CAGGCTCGTCTCCATCAGTGAATGGAACCTGAGCTCACTGTTTCTCATGCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | AGACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGAGCTCCTGGTGCTTCTaGCTGTCTGTCATCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRACCPTTSPMSSSISHESSWCF*LSVILL Trigger: CAGCAAGATGACAGACAGCAAGAAGCACCAGGAGCT...CTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS TCA 90 bp | TTTCTCATTTGCCTCAGCCTCAGGCCTAGCTTCCAGACCATAGCCTaGAGGGAGAGTGGTCATCTCCCAGGGTTGGGTGTGCTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLICLSLRPSFQTIA*RESGHLPGLGVLFV Trigger: AACAAAGAGCACACCCAACCCTGGGAGATGACCACTCTCCCTTCAGGCTATGGTCTGGAAGCTAGGCCTGAGGCTGAGGCAAATGAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 90 bp | AAATGGTACGATCACAAGAACAACTTCCAGCGACACTGCCCTGGTTaGCATCGCCTGGCAGGGTCAGCAGCGCCAACAAGAAAAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: KWYDHKNNFQRHCPG*HRLAGSAAPTRKGR Trigger: TCTTCCTTTTCTTGTTGGCGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATCGTACCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR CAA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGGCGACACTGCCCTGGTaGCCATCGCCTGGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTALLNHVFECYILLDVGATLPW*PSPGRV Trigger: GACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGC...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | AGACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGGGTTGGGTGTGCTCTTaGTTTAAGGACAGTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRACCPTTSPMSSSISHEGWVCS*FKDSAP Trigger: AGGAGCACTGTCCTTAAACAAAGAGCACACCCAACC...CTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | GGAGACCTAGGGATACGTAGTCATATACACAGGGAAGGCTGGAGACCTGGGGATAGCTCCTGGTGCTTCTaGCTGTCTGTCATCTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDLGIRSHIHREGWRPGDSSWCF*LSVILL Trigger: CAGCAAGATGACAGACAGCAAGAAGCACCAGGAGCT...ATCCCCAGGTCTCCAGCCTTCCCTGTGTATATGACTACGTATCCCTAGGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS CCA 90 bp | GGATGTGATCCAAAGTACCCTGCGGTATCTGGGTGCCAGAAGAAATaGTACGATCACAAGAACAACTTCCAGCGACACTGCCCTGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GCDPKYPAVSGCQKK*YDHKNNFQRHCPGC Trigger: GCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATCGTACCATTTCTTCTGGCACCCAGATACCGCAGGGTACTTTGGATCACATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 90 bp | GTTTTTGGTGGTGAAAACTCTTCCCATGACCAGTTCCACACTCTTTaGGCTCAAAGCAGTCCACTAGTTCACGGACCCACTGGTCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VFGGENSSHDQFHTL*AQSSPLVHGPTGLG Trigger: GCCAAGACCAGTGGGTCCGTGAACTAGTGGACTGCTTTGAGCGCAAAGAGTGTGGAACTGGTCATGGGAAGAGTTTTCACCACCAAAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | CTGAAACCTGTTGACTTATCTCTCCAGCCCTCAGCCAATTGGTCTAAAAGTAATACGGACCCACTGGTCTaGGCTTCCCCCACACACGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKPVDLSLQPSANWSKSNTDPLV*ASPTHA Trigger: AGCGTGTGTGGGGGAAGCCAAGACCAGTGGGTCCGT...ATTACTTTTAGACCAATTGGCTGAGGGCTGGAGAGATAAGTCAACAGGTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS-3UTR CAA 90 bp | AGACGAGCCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGTTGCTGTCTGTCATCTaGCTGTTTCTCATTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RRACCPTTSPMSSSISHELLSVI*LFLICL Trigger: GAGGCAAATGAGAAACAGCAAGATGACAGACAGCAA...CTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGGCTCGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | CCTGCTGCCCTACCACCTCTCCCATGTCATCATCCATCTCTCATGAGCTTCCACTTGAGGCAAATGTTTTaGGTGGTGAAAACTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAALPPLPCHHPSLMSFHLRQMF*VVKTLP Trigger: GGGAAGAGTTTTCACCACCAAAAACATTTGCCTCAA...GTGGAAGCTCATGAGAGATGGATGATGACATGGGAGAGGTGGTAGGGCAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGCCCCCACACACGCTTTaGGACTGCAACTGGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTALLNHVFECYILLDVGPPHTL*DCNWNL Trigger: CAGGTTCCAGTTGCAGTCCAAAAGCGTGTGTGGGGG...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | GACAGCATGAGAAACAGTGAGCTCAGGTTCCATTCACTGATGGAGACGAGCCTGTTGCTGTCTGTCATCTaGCTGTTTCTCATTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: DSMRNSELRFHSLMETSLLLSVI*LFLICL Trigger: GAGGCAAATGAGAAACAGCAAGATGACAGACAGCAA...CAGGCTCGTCTCCATCAGTGAATGGAACCTGAGCTCACTGTTTCTCATGCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | CAGACACTTTTTAAAATTGATCTGGTAGTGGGAGGGTTGAACCTAGAACTTTACGGTTGGGTGTGCTCTTaGTTTAAGGACAGTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QTLFKIDLVVGGLNLELYGWVCS*FKDSAP Trigger: AGGAGCACTGTCCTTAAACAAAGAGCACACCCAACC...GTAAAGTTCTAGGTTCAACCCTCCCACTACCAGATCAATTTTAAAAAGTGTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS-3UTR CAA 90 bp | GGGACTGCACTTTTGAACCACGTATTTGAGTGTTACATTTTATTAGACGTGGGGTTGAGGCAAATGTTTTaGGTGGTGAAAACTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GTALLNHVFECYILLDVGLRQMF*VVKTLP Trigger: GGGAAGAGTTTTCACCACCAAAAACATTTGCCTCAA...CCCCACGTCTAATAAAATGTAACACTCAAATACGTGGTTCAAAAGTGCAGTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CCA 72 bp | GACAATGGCCAGGAGGGACAGCACCGGTACCCAAGCTaGTGTGCTAGCTCCAGCTCCTGGTGCTTCTTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DNGQEGQHRYPS*CASSSSWCFLL Trigger: CAGCAAGAAGCACCAGGAGCTGGAGCTAGCACACCAGCTTGGGTACCGGTGCTGTCCCTCCTGGCCATTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS TCA 72 bp | TGCCTCAGCCTCAGGCCTAGCTTCCAGACCATAGCCTaGAGGGAGAGTGGTCATCTCCCAGGGTTGGGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CLSLRPSFQTIA*RESGHLPGLGV Trigger: CACACCCAACCCTGGGAGATGACCACTCTCCCTTCAGGCTATGGTCTGGAAGCTAGGCCTGAGGCTGAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS TCA 72 bp | CTCTCCTGTTGCACAGCACATAGGCCATGGCTGCAGTaGGGAAGAAGACAATGGCCAGGAGGGACAGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: LSCCTAHRPWLQ*GRRQWPGGTAP Trigger: CGGTGCTGTCCCTCCTGGCCATTGTCTTCTTCCTCACTGCAGCCATGGCCTATGTGCTGTGCAACAGGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 72 bp | GATCACAAGAACAACTTCCAGCGACACTGCCCTGGTTaGCATCGCCTGGCAGGGTCAGCAGCGCCAACAAGA | + |
|
Preference number: 6 (lower is better) Translates to: DHKNNFQRHCPG*HRLAGSAAPTR Trigger: TCTTGTTGGCGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 72 bp | AAATGGTACGATCACAAGAACAACTTCCAGCGACACTaGCCTGGTTGCCATCGCCTGGCAGGGTCAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: KWYDHKNNFQRH*PGCHRLAGSAA Trigger: CGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATCGTACCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CCA 72 bp | TTGCGCTCAAAGCAGTCCACTAGTTCACGGACCCACTaGTCTTGGCTTCCCCCACACACGCTTTTGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LRSKQSTSSRTH*SWLPPHTLLDC Trigger: GCAGTCCAAAAGCGTGTGTGGGGGAAGCCAAGACCAGTGGGTCCGTGAACTAGTGGACTGCTTTGAGCGCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CAA 90 bp | CACCGGTACCCAAGCTGGTGTGCTAGCTCCAGCTCCTGGTGCTTCTaGCTGTCTGTCATCTTGCTGTTTCTCATTTGCCTCAGCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HRYPSWCASSSSWCF*LSVILLFLICLSLR Trigger: CCTGAGGCTGAGGCAAATGAGAAACAGCAAGATGACAGACAGCAAGAAGCACCAGGAGCTGGAGCTAGCACACCAGCTTGGGTACCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CAA 90 bp | GAAATGGTACGATCACAAGAACAACTTCCAGCGACACTGCCCTGGTaGCCATCGCCTGGCAGGGTCAGCAGCGCCAACAAGAAAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EMVRSQEQLPATLPW*PSPGRVSSANKKRK Trigger: CTTCCTTTTCTTGTTGGCGCTGCTGACCCTGCCAGGCGATGGCAACCAGGGCAGTGTCGCTGGAAGTTGTTCTTGTGATCGTACCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019064.9 |
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| CDS GCA 72 bp | CCTGAAGGGAGAGTGGTCATCTCCCAGGGTTGGGTGTaGTCTTTGTTTAAGGACAGTGCTCCTGATGGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: PEGRVVISQGWV*SLFKDSAPDGR Trigger: TCTTCCATCAGGAGCACTGTCCTTAAACAAAGAGCACACCCAACCCTGGGAGATGACCACTCTCCCTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 72 bp | TCTTGGTTCAACAGGAGTGTACCAGAGCTGCAAACCTaGAGAGTTCTGCTGTGTCGCTCTCCTGTTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: SWFNRSVPELQT*RVLLCRSPVAQ Trigger: CTGTGCAACAGGAGAGCGACACAGCAGAACTCTGCAGGTTTGCAGCTCTGGTACACTCCTGTTGAACCAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CCA 72 bp | GCTCTTTGTTTAAGGACAGTGCTCCTGATGGAAGAGTaGAGTGCTGAGTGCTCTGACTATGTGCAGGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALCLRTVLLMEE*SAECSDYVQGC Trigger: GCACCCCTGCACATAGTCAGAGCACTCAGCACTCCACTCTTCCATCAGGAGCACTGTCCTTAAACAAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CAA 72 bp | CGGACCCACTGGTCTTGGCTTCCCCCACACACGCTTTaGGACTGCAACTGGAACCTGATAAAGAATGGACAA | + |
|
Preference number: 6 (lower is better) Translates to: RTHWSWLPPHTL*DCNWNLIKNGQ Trigger: TTGTCCATTCTTTATCAGGTTCCAGTTGCAGTCCAAAAGCGTGTGTGGGGGAAGCCAAGACCAGTGGGTCCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS CAA 72 bp | CCAAGCTGGTGTGCTAGCTCCAGCTCCTGGTGCTTCTaGCTGTCTGTCATCTTGCTGTTTCTCATTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSWCASSSSWCF*LSVILLFLICL Trigger: GAGGCAAATGAGAAACAGCAAGATGACAGACAGCAAGAAGCACCAGGAGCTGGAGCTAGCACACCAGCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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| CDS GCA 72 bp | GGTGAAAACTCTTCCCATGACCAGTTCCACACTCTTTaGGCTCAAAGCAGTCCACTAGTTCACGGACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GENSSHDQFHTL*AQSSPLVHGPT Trigger: AGTGGGTCCGTGAACTAGTGGACTGCTTTGAGCGCAAAGAGTGTGGAACTGGTCATGGGAAGAGTTTTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019064.9 ENSMUST00000126391.2 |
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