Pregenerated sensors for CXCL14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021508Ensembl transcript IDs: ENSMUST00000021970.11, ENSMUST00000224801.2
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAATTGCCCTGCAACAGGGGCCACAGTGGAGTCACACTGAAACTCTaGCCAGTCATAAGCCCAGGAGAGCCTGTGGCAGCTGCGCAGAGC | + |
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Preference number: 1 (lower is better) Translates to: QLPCNRGHSGVTLKL*PVISPGEPVAAAQS Trigger: GCTCTGCGCAGCTGCCACAGGCTCTCCTGGGCTTATGACTGGTCAGAGTTTCAGTGTGACTCCACTGTGGCCCCTGTTGCAGGGCAATTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 90 bp | CCCCCGCCAACCGCCCAGCAAAAAGCCACTTGTAATGAAGTCTGGTaGGCAGGCGAGCTGGATCTCACATCTGGAAGCCTTTCACACACA | + |
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Preference number: 1 (lower is better) Translates to: PPPTAQQKATCNEVW*AGELDLTSGSLSHT Trigger: TGTGTGTGAAAGGCTTCCAGATGTGAGATCCAGCTCGCCTGCGCACCAGACTTCATTACAAGTGGCTTTTTGCTGGGCGGTTGGCGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 90 bp | CTGGTAAGTAGACTGAGTTCCTCTAGGCACAGATGTAGAAGGACCTaGTCCCAATTGCCCTGCAACAGGGGCCACAGTGGAGTCACACTG | + |
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Preference number: 1 (lower is better) Translates to: LVSRLSSSRHRCRRT*SQLPCNRGHSGVTL Trigger: CAGTGTGACTCCACTGTGGCCCCTGTTGCAGGGCAATTGGGAGCAGGTCCTTCTACATCTGTGCCTAGAGGAACTCAGTCTACTTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 90 bp | CATCTTCCCTTGTCCTCCCGAACATCGAGCATCATTTTCTCACACTaGTGGGGACTTTGGATGCCTCAGAAGCATCTTCTACCAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: HLPLSSRTSSIIFSH*WGLWMPQKHLLPKQ Trigger: CTGCTTTGGTAGAAGATGCTTCTGAGGCATCCAAAGTCCCCAGCAGTGTGAGAAAATGATGCTCGATGTTCGGGAGGACAAGGGAAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 90 bp | TTTATTACTTTCTCTTTTCATCTTAGAAAGAACATGAAACCTGCATaGAGCACTCAGGGGTCTCAGCATTTACATAGCAGATACACAGCC | + |
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Preference number: 1 (lower is better) Translates to: FITFSFHLRKNMKPA*STQGSQHLHSRYTA Trigger: GGCTGTGTATCTGCTATGTAAATGCTGAGACCCCTGAGTGCTGCATGCAGGTTTCATGTTCTTTCTAAGATGAAAAGAGAAAGTAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTAGCTCTGGCTGTGTGTCCTGCATCTAATCCTGCATCTTCCCTTGTCCTCGTCGTGACAGGGGAATaGGCTGGGGTGCGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CVALAVCPASNPASSLVLVVTGE*AGVRVG Trigger: CCCCACCCGCACCCCAGCTCATTCCCCTGTCACGAC...GAGGACAAGGGAAGATGCAGGATTAGATGCAGGACACACAGCCAGAGCTACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCCTGCATCTAATCCTGCATCTTCCCTTGTCCTCCCGAACATCGAGCATCGTCGTGACAGGGGAATaGGCTGGGGTGCGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CVLHLILHLPLSSRTSSIVVTGE*AGVRVG Trigger: CCCCACCCGCACCCCAGCTCATTCCCCTGTCACGAC...GATGCTCGATGTTCGGGAGGACAAGGGAAGATGCAGGATTAGATGCAGGACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR TCA 90 bp | GATACACAGCCATACAGTGCGGCCTCTAATGAGGGGCAGTGTGTGGCATGGGGTTGCAAAGTCCTCTGCTaGAGTCTCTCAACTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: DTQPYSAASNEGQCVAWGCKVLC*SLSTGL Trigger: CAGGCCAGTTGAGAGACTTCAGCAGAGGACTTTGCA...ACCCCATGCCACACACTGCCCCTCATTAGAGGCCGCACTGTATGGCTGTGTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGGCAATATGTACACAGGAGAGGGCAGGGCGCAGGATCGTCCTAACATCCGAACGGTCTCAACCATaGTCACTGTTCCTCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LKAICTQERAGRRIVLTSERSQP*SLFLPG Trigger: GCCTGGGAGGAACAGTGAGCATGGTTGAGACCGTTC...GGATGTTAGGACGATCCTGCGCCCTGCCCTCTCCTGTGTACATATTGCCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAGCAGGGGACCTTTCAGAAACCCTCAGTTTGCAAGAAAAAGACCCAGCTCACTTGCCTGGTCGTaGCAGGGGAATGAGCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: YQSRGPFRNPQFARKRPSSLAWS*QGNELG Trigger: CCCCAGCTCATTCCCCTGTCACGACCAGGCAAGTGA...GCTGGGTCTTTTTCTTGCAAACTGAGGGTTTCTGAAAGGTCCCCTGCTTTGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR GCA 90 bp | TACCAAAGCAGGGGACCTTTCAGAAACCCTCAGTTTGCAAGAAAAAGACCCAGCTGCTCCCAATTGCCCTaGAACAGGGGCCACAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: YQSRGPFRNPQFARKRPSCSQLP*NRGHSG Trigger: TCCACTGTGGCCCCTGTTGCAGGGCAATTGGGAGCA...GCTGGGTCTTTTTCTTGCAAACTGAGGGTTTCTGAAAGGTCCCCTGCTTTGGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTCAGGGGTCTCAGCATTTACATAGCAGATACACAGCCATACAGTGCGGCCGCTGGATCTCACATCTaGAAGCCTTTCACACACAGC | + |
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Preference number: 2 (lower is better) Translates to: ALRGLSIYIADTQPYSAAAGSHI*KPFTHS Trigger: GCTGTGTGTGAAAGGCTTCCAGATGTGAGATCCAGC...GGCCGCACTGTATGGCTGTGTATCTGCTATGTAAATGCTGAGACCCCTGAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGGCAATATGTACACAGGAGAGGGCAGGGCGCAGGATCGTCCTAACATCCGAGTGCACTTTCTGTTaGGGTGAGGGAAAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LKAICTQERAGRRIVLTSECTFC*GEGKKQ Trigger: TTGTTTCTTTCCCTCACCCCAACAGAAAGTGCACTC...GGATGTTAGGACGATCCTGCGCCCTGCCCTCTCCTGTGTACATATTGCCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAAAGCAGGGGACCTTTCAGAAACCCTCAGTTTGCAAGAAAAAGACCCAGCTGCAAAGTCCTCTGCTaGAGTCTCTCAACTGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: YQSRGPFRNPQFARKRPSCKVLC*SLSTGL Trigger: CAGGCCAGTTGAGAGACTTCAGCAGAGGACTTTGCA...GCTGGGTCTTTTTCTTGCAAACTGAGGGTTTCTGAAAGGTCCCCTGCTTTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR TCA 90 bp | AACATGAAACCTGCATGCAGCACTCAGGGGTCTCAGCATTTACATAGCAGATACGTGGGGGAGGGGTACTaGAGGCAATATGTACACAGG | + |
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Preference number: 2 (lower is better) Translates to: NMKPACSTQGSQHLHSRYVGEGY*RQYVHR Trigger: CCTGTGTACATATTGCCTTCAGTACCCCTCCCCCAC...GTATCTGCTATGTAAATGCTGAGACCCCTGAGTGCTGCATGCAGGTTTCATGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAGCAGGGGACCTTTCAGAAACCCTCAGTTTGCAAGAAAAAGACCCAGCTCAACAGGGGCCACAGTaGAGTCACACTGAAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: TKAGDLSETLSLQEKDPAQQGPQ*SHTETL Trigger: CAGAGTTTCAGTGTGACTCCACTGTGGCCCCTGTTG...AGCTGGGTCTTTTTCTTGCAAACTGAGGGTTTCTGAAAGGTCCCCTGCTTTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAACAGTGCTGTTTGCGTATTCACTGAGGGGGAGTGCACTTTCTGTTGGCACTGCTGGGGACTTTaGATGCCTCAGAAGCATCTT | + |
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Preference number: 2 (lower is better) Translates to: SENSAVCVFTEGECTFCWHCWGL*MPQKHL Trigger: AAGATGCTTCTGAGGCATCCAAAGTCCCCAGCAGTG...CCAACAGAAAGTGCACTCCCCCTCAGTGAATACGCAAACAGCACTGTTCTCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | GCACTCAGGGGTCTCAGCATTTACATAGCAGATACACAGCCATACAGTGCGGCCGTCTCTCAACTGGCCTaGAGTTTTTCTTTCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: ALRGLSIYIADTQPYSAAVSQLA*SFSFHD Trigger: ATCATGGAAAGAAAAACTCCAGGCCAGTTGAGAGAC...GGCCGCACTGTATGGCTGTGTATCTGCTATGTAAATGCTGAGACCCCTGAGTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTAGCTCTGGCTGTGTGTCCTGCATCTAATCCTGCATCTTCCCTTGTCCTCCTGAAGTCTCTCAACTaGCCTGGAGTTTTTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CVALAVCPASNPASSLVLLKSLN*PGVFLS Trigger: GGAAAGAAAAACTCCAGGCCAGTTGAGAGACTTCAG...GAGGACAAGGGAAGATGCAGGATTAGATGCAGGACACACAGCCAGAGCTACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAATGAAGTCTGGTGCGCAGGCGAGCTGGATCTCACATCTGGAAGCCTTTCACTGAAGTCTCTCAACTaGCCTGGAGTTTTTCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: CNEVWCAGELDLTSGSLSLKSLN*PGVFLS Trigger: GGAAAGAAAAACTCCAGGCCAGTTGAGAGACTTCAG...TGAAAGGCTTCCAGATGTGAGATCCAGCTCGCCTGCGCACCAGACTTCATTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGGCAATATGTACACAGGAGAGGGCAGGGCGCAGGATCGTCCTAACATCCATGTGTGGTGACATATaGACAAATACAAAACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: LKAICTQERAGRRIVLTSMCGDI*TNTKPL Trigger: AAGGGGTTTTGTATTTGTCCATATGTCACCACACAT...GGATGTTAGGACGATCCTGCGCCCTGCCCTCTCCTGTGTACATATTGCCTTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGAACAGTGCTGTTTGCGTATTCACTGAGGGGGAGTGCACTTTCTGTTGGGTCTCTCAACTGGCCTaGAGTTTTTCTTTCCATGAT | + |
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Preference number: 2 (lower is better) Translates to: SENSAVCVFTEGECTFCWVSQLA*SFSFHD Trigger: ATCATGGAAAGAAAAACTCCAGGCCAGTTGAGAGAC...CCAACAGAAAGTGCACTCCCCCTCAGTGAATACGCAAACAGCACTGTTCTCTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | CATCTTAGAAAGAACATGAAACCTGCATGCAGCACTCAGGGGTCTCAGCATTTAATTTTCTCACACTGCTaGGGACTTTGGATGCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HLRKNMKPACSTQGSQHLIFSHC*GLWMPQ Trigger: CTGAGGCATCCAAAGTCCCCAGCAGTGTGAGAAAAT...TAAATGCTGAGACCCCTGAGTGCTGCATGCAGGTTTCATGTTCTTTCTAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CCA 90 bp | AACATGAAACCTGCATGCAGCACTCAGGGGTCTCAGCATTTACATAGCAGATACATGTGTGGTGACATATaGACAAATACAAAACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: NMKPACSTQGSQHLHSRYMCGDI*TNTKPL Trigger: AAGGGGTTTTGTATTTGTCCATATGTCACCACACAT...GTATCTGCTATGTAAATGCTGAGACCCCTGAGTGCTGCATGCAGGTTTCATGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 72 bp | CTGACCAGTCATAAGCCCAGGAGAGCCTGTGGCAGCTaGGCAGAGCCGCCAGGCTCTCTGAGCGGAAGCTTT | + |
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Preference number: 3 (lower is better) Translates to: LTSHKPRRACGS*AEPPGSLSGSF Trigger: AAAGCTTCCGCTCAGAGAGCCTGGCGGCTCTGCGCAGCTGCCACAGGCTCTCCTGGGCTTATGACTGGTCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTAGCTCTGGCTGTGTGTCCTGCATCTAATCCTGCATCTTCCCTTGTCCTCAGGACCTGCTCCCAATaGCCCTGCAACAGGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: CVALAVCPASNPASSLVLRTCSQ*PCNRGH Trigger: GTGGCCCCTGTTGCAGGGCAATTGGGAGCAGGTCCT...GAGGACAAGGGAAGATGCAGGATTAGATGCAGGACACACAGCCAGAGCTACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR CCA 72 bp | GACCTGCTCCCAATTGCCCTGCAACAGGGGCCACAGTaGAGTCACACTGAAACTCTGACCAGTCATAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: DLLPIALQQGPQ*SHTETLTSHKP Trigger: GGGCTTATGACTGGTCAGAGTTTCAGTGTGACTCCACTGTGGCCCCTGTTGCAGGGCAATTGGGAGCAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 72 bp | AGGCACAGATGTAGAAGGACCTGCTCCCAATTGCCCTaGAACAGGGGCCACAGTGGAGTCACACTGAAACTC | + |
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Preference number: 3 (lower is better) Translates to: RHRCRRTCSQLP*NRGHSGVTLKL Trigger: GAGTTTCAGTGTGACTCCACTGTGGCCCCTGTTGCAGGGCAATTGGGAGCAGGTCCTTCTACATCTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 72 bp | AGACTGAGTTCCTCTAGGCACAGATGTAGAAGGACCTaGTCCCAATTGCCCTGCAACAGGGGCCACAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: RLSSSRHRCRRT*SQLPCNRGHSG Trigger: TCCACTGTGGCCCCTGTTGCAGGGCAATTGGGAGCAGGTCCTTCTACATCTGTGCCTAGAGGAACTCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR CCA 72 bp | CCAACCGCCCAGCAAAAAGCCACTTGTAATGAAGTCTaGTGCGCAGGCGAGCTGGATCTCACATCTGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: PTAQQKATCNEV*CAGELDLTSGS Trigger: GCTTCCAGATGTGAGATCCAGCTCGCCTGCGCACCAGACTTCATTACAAGTGGCTTTTTGCTGGGCGGTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 72 bp | ACCGCCCAGCAAAAAGCCACTTGTAATGAAGTCTGGTaGGCAGGCGAGCTGGATCTCACATCTGGAAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: TAQQKATCNEVW*AGELDLTSGSL Trigger: AAGGCTTCCAGATGTGAGATCCAGCTCGCCTGCGCACCAGACTTCATTACAAGTGGCTTTTTGCTGGGCGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR CCA 72 bp | AAGCCACTTGTAATGAAGTCTGGTGCGCAGGCGAGCTaGATCTCACATCTGGAAGCCTTTCACACACAGCTA | + |
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Preference number: 3 (lower is better) Translates to: KPLVMKSGAQAS*ISHLEAFHTQL Trigger: TAGCTGTGTGTGAAAGGCTTCCAGATGTGAGATCCAGCTCGCCTGCGCACCAGACTTCATTACAAGTGGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR CCA 72 bp | ACATCGAGCATCATTTTCTCACACTGCTGGGGACTTTaGATGCCTCAGAAGCATCTTCTACCAAAGCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: TSSIIFSHCWGL*MPQKHLLPKQG Trigger: CCCCTGCTTTGGTAGAAGATGCTTCTGAGGCATCCAAAGTCCCCAGCAGTGTGAGAAAATGATGCTCGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR GCA 72 bp | TTGTCCTCCCGAACATCGAGCATCATTTTCTCACACTaGTGGGGACTTTGGATGCCTCAGAAGCATCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LSSRTSSIIFSH*WGLWMPQKHLL Trigger: TAGAAGATGCTTCTGAGGCATCCAAAGTCCCCAGCAGTGTGAGAAAATGATGCTCGATGTTCGGGAGGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS-3UTR GCA 90 bp | ATTGCCCTGCAACAGGGGCCACAGTGGAGTCACACTGAAACTCTGACCAGTCATCTCTGCAGCTTAGGGTaGAGGCAGTGCTCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: IALQQGPQWSHTETLTSHLCSLG*RQCSWP Trigger: GGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAG...ATGACTGGTCAGAGTTTCAGTGTGACTCCACTGTGGCCCCTGTTGCAGGGCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS-3UTR GCA 90 bp | CAACCGCCCAGCAAAAAGCCACTTGTAATGAAGTCTGGTGCGCAGGCGAGCTGGAAGCGTTTGGTGCTCTaGAGCTTAGGGTGCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QPPSKKPLVMKSGAQASWKRLVL*SLGCRQ Trigger: CTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTT...CCAGCTCGCCTGCGCACCAGACTTCATTACAAGTGGCTTTTTGCTGGGCGGTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS-3UTR CCA 90 bp | TGTGTCCTGCATCTAATCCTGCATCTTCCCTTGTCCTCCCGAACATCGAGCATCTGCAGGCAGTGCTCCTaGCCCCGGTACCTGGACATG | + |
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Preference number: 4 (lower is better) Translates to: CVLHLILHLPLSSRTSSICRQCS*PRYLDM Trigger: CATGTCCAGGTACCGGGGCCAGGAGCACTGCCTGCA...GATGCTCGATGTTCGGGAGGACAAGGGAAGATGCAGGATTAGATGCAGGACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| 3UTR CAA 72 bp | TCCTCTAGGCACAGATGTAGAAGGACCTGCTCCCAATaGCCCTGCAACAGGGGCCACAGTGGAGTCACACTG | + |
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Preference number: 4 (lower is better) Translates to: SSRHRCRRTCSQ*PCNRGHSGVTL Trigger: CAGTGTGACTCCACTGTGGCCCCTGTTGCAGGGCAATTGGGAGCAGGTCCTTCTACATCTGTGCCTAGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS-3UTR GCA 90 bp | AGAGGATGTGTAGCTCTGGCTGTGTGTCCTGCATCTAATCCTGCATCTTCCCTTTTAGGGTGCAGGCAGTaGTCCTGGCCCCGGTACCTG | + |
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Preference number: 4 (lower is better) Translates to: RGCVALAVCPASNPASSLLGCRQ*SWPRYL Trigger: CAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAA...AAGGGAAGATGCAGGATTAGATGCAGGACACACAGCCAGAGCTACACATCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS-3UTR CCA 90 bp | CTGAAGGCAATATGTACACAGGAGAGGGCAGGGCGCAGGATCGTCCTAACATCCCTTCTCCTCGCAGTGTaGGTACTTTGGCTTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: LKAICTQERAGRRIVLTSLLLAV*VLWLHF Trigger: GAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAG...GGATGTTAGGACGATCCTGCGCCCTGCCCTCTCCTGTGTACATATTGCCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS-3UTR CCA 90 bp | CATCTTAGAAAGAACATGAAACCTGCATGCAGCACTCAGGGGTCTCAGCATTTACGCTGTAGCGGATCTTaGGCCCCTTCCGGGAACACT | + |
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Preference number: 4 (lower is better) Translates to: HLRKNMKPACSTQGSQHLRCSGS*APSGNT Trigger: AGTGTTCCCGGAAGGGGCCCAAGATCCGCTACAGCG...TAAATGCTGAGACCCCTGAGTGCTGCATGCAGGTTTCATGTTCTTTCTAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS-3UTR CCA 90 bp | TCCCAGGCGCTTATAAAGCTCAGATGTGTGGTGACATATGGACAAATACAAAACCGCTGTAGCGGATCTTaGGCCCCTTCCGGGAACACT | + |
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Preference number: 4 (lower is better) Translates to: SQALIKLRCVVTYGQIQNRCSGS*APSGNT Trigger: AGTGTTCCCGGAAGGGGCCCAAGATCCGCTACAGCG...GTTTTGTATTTGTCCATATGTCACCACACATCTGAGCTTTATAAGCGCCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| 3UTR CAA 72 bp | TGGCTGTGTGTCCTGCATCTAATCCTGCATCTTCCCTaGTCCTCCCGAACATCGAGCATCATTTTCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: WLCVLHLILHLP*SSRTSSIIFSH Trigger: GTGTGAGAAAATGATGCTCGATGTTCGGGAGGACAAGGGAAGATGCAGGATTAGATGCAGGACACACAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS-3UTR CCA 90 bp | TACCAAAGCAGGGGACCTTTCAGAAACCCTCAGTTTGCAAGAAAAAGACCCAGCCTTCTCCTCGCAGTGTaGGTACTTTGGCTTCATTTC | + |
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Preference number: 4 (lower is better) Translates to: YQSRGPFRNPQFARKRPSLLLAV*VLWLHF Trigger: GAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAG...GCTGGGTCTTTTTCTTGCAAACTGAGGGTTTCTGAAAGGTCCCCTGCTTTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS CCA 90 bp | CGTCGCTGTAGCGGATCTTGGGCCCCTTCCGGGAACACTTACACTTaGACCCGTCCACGCGCGAGGCGCACAGCGCCAGGAGCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: RRCSGSWAPSGNTYT*TRPRARRTAPGAAG Trigger: TCCTGCTGCTCCTGGCGCTGTGCGCCTCGCGCGTGGACGGGTCCAAGTGTAAGTGTTCCCGGAAGGGGCCCAAGATCCGCTACAGCGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS GCA 90 bp | GCATTGTACCACTTGATGAAGCGTTTGGTGCTCTGCAGCTTAGGGTaGAGGCAGTGCTCCTGGCCCCGGTACCTGGACATGCTCTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: ALYHLMKRLVLCSLG*RQCSWPRYLDMLLV Trigger: CACCAAGAGCATGTCCAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTGGTACAATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS GCA 90 bp | TTCTCGTTCCAGGCATTGTACCACTTGATGAAGCGTTTGGTGCTCTaGAGCTTAGGGTGCAGGCAGTGCTCCTGGCCCCGGTACCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: FSFQALYHLMKRLVL*SLGCRQCSWPRYLD Trigger: GTCCAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTGGTACAATGCCTGGAACGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 90 bp | ACTTTGGCTTCATTTCCAGCTTCTTCACGTCGCTGTAGCGGATCTTaGGCCCCTTCCGGGAACACTTACACTTGGACCCGTCCACGCGCG | + |
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Preference number: 5 (lower is better) Translates to: TLASFPASSRRCSGS*APSGNTYTWTRPRA Trigger: CGCGCGTGGACGGGTCCAAGTGTAAGTGTTCCCGGAAGGGGCCCAAGATCCGCTACAGCGACGTGAAGAAGCTGGAAATGAAGCCAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS CCA 90 bp | ATGAAGCGTTTGGTGCTCTGCAGCTTAGGGTGCAGGCAGTGCTCCTaGCCCCGGTACCTGGACATGCTCTTGGTGGTGACGATAACCATC | + |
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Preference number: 5 (lower is better) Translates to: MKRLVLCSLGCRQCS*PRYLDMLLVVTITI Trigger: GATGGTTATCGTCACCACCAAGAGCATGTCCAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 90 bp | CTTGGTGGTGACGATAACCATCTTCTCCTCGCAGTGTGGGTACTTTaGCTTCATTTCCAGCTTCTTCACGTCGCTGTAGCGGATCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LGGDDNHLLLAVWVL*LHFQLLHVAVADLG Trigger: CCCAAGATCCGCTACAGCGACGTGAAGAAGCTGGAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAGATGGTTATCGTCACCACCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 90 bp | GGACATGCTCTTGGTGGTGACGATAACCATCTTCTCCTCGCAGTGTaGGTACTTTGGCTTCATTTCCAGCTTCTTCACGTCGCTGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: GHALGGDDNHLLLAV*VLWLHFQLLHVAVA Trigger: CGCTACAGCGACGTGAAGAAGCTGGAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAGATGGTTATCGTCACCACCAAGAGCATGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS-3UTR CAA 90 bp | AGAGGATGTGTAGCTCTGGCTGTGTGTCCTGCATCTAATCCTGCATCTTCCCTTCACTTGATGAAGCGTTaGGTGCTCTGCAGCTTAGGG | + |
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Preference number: 5 (lower is better) Translates to: RGCVALAVCPASNPASSLHLMKR*VLCSLG Trigger: CCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTG...AAGGGAAGATGCAGGATTAGATGCAGGACACACAGCCAGAGCTACACATCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 90 bp | TTCTTCGTAGACCATAACCATCTTCTCCTCGCAGTGTGGGTACTTTaGCTTCATTTCCAGCTTCTTCACGTCGCTGTAGCGGATCTTGGG | + |
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Preference number: 5 (lower is better) Translates to: FFVDHNHLLLAVWVL*LHFQLLHVAVADLG Trigger: CCCAAGATCCGCTACAGCGACGTGAAGAAGCTGGAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAGATGGTTATGGTCTACGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224801.2 |
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| CDS-3UTR CAA 90 bp | TACCAAAGCAGGGGACCTTTCAGAAACCCTCAGTTTGCAAGAAAAAGACCCAGCTTCTCGTTCCAGGCATaGTACCACTTGATGAAGCGT | + |
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Preference number: 5 (lower is better) Translates to: YQSRGPFRNPQFARKRPSFSFQA*YHLMKR Trigger: ACGCTTCATCAAGTGGTACAATGCCTGGAACGAGAA...GCTGGGTCTTTTTCTTGCAAACTGAGGGTTTCTGAAAGGTCCCCTGCTTTGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 72 bp | AGCGGATCTTGGGCCCCTTCCGGGAACACTTACACTTaGACCCGTCCACGCGCGAGGCGCACAGCGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGSWAPSGNTYT*TRPRARRTAPG Trigger: TCCTGGCGCTGTGCGCCTCGCGCGTGGACGGGTCCAAGTGTAAGTGTTCCCGGAAGGGGCCCAAGATCCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS CCA 72 bp | TTGGTGCTCTGCAGCTTAGGGTGCAGGCAGTGCTCCTaGCCCCGGTACCTGGACATGCTCTTGGTGGTGACG | + |
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Preference number: 6 (lower is better) Translates to: LVLCSLGCRQCS*PRYLDMLLVVT Trigger: CGTCACCACCAAGAGCATGTCCAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS GCA 72 bp | AAGCGTTTGGTGCTCTGCAGCTTAGGGTGCAGGCAGTaGTCCTGGCCCCGGTACCTGGACATGCTCTTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KRLVLCSLGCRQ*SWPRYLDMLLV Trigger: CACCAAGAGCATGTCCAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CAA 90 bp | ACCCTGCGCTTCTCGTTCCAGGCATTGTACCACTTGATGAAGCGTTaGGTGCTCTGCAGCTTAGGGTGCAGGCAGTGCTCCTGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: TLRFSFQALYHLMKR*VLCSLGCRQCSWPR Trigger: CCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTGGTACAATGCCTGGAACGAGAAGCGCAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS GCA 72 bp | CACTTGATGAAGCGTTTGGTGCTCTGCAGCTTAGGGTaGAGGCAGTGCTCCTGGCCCCGGTACCTGGACATG | + |
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Preference number: 6 (lower is better) Translates to: HLMKRLVLCSLG*RQCSWPRYLDM Trigger: CATGTCCAGGTACCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS GCA 72 bp | CAGGCATTGTACCACTTGATGAAGCGTTTGGTGCTCTaGAGCTTAGGGTGCAGGCAGTGCTCCTGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: QALYHLMKRLVL*SLGCRQCSWPR Trigger: CCGGGGCCAGGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTGGTACAATGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CAA 72 bp | AGGCAGTGCTCCTGGCCCCGGTACCTGGACATGCTCTaGGTGGTGACGATAACCATCTTCTCCTCGCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: RQCSWPRYLDML*VVTITIFSSQC Trigger: ACACTGCGAGGAGAAGATGGTTATCGTCACCACCAAGAGCATGTCCAGGTACCGGGGCCAGGAGCACTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 72 bp | TCATTTCCAGCTTCTTCACGTCGCTGTAGCGGATCTTaGGCCCCTTCCGGGAACACTTACACTTGGACCCGT | + |
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Preference number: 6 (lower is better) Translates to: SFPASSRRCSGS*APSGNTYTWTR Trigger: ACGGGTCCAAGTGTAAGTGTTCCCGGAAGGGGCCCAAGATCCGCTACAGCGACGTGAAGAAGCTGGAAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021970.11 ENSMUST00000224801.2 |
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| CDS CAA 72 bp | TTCTCGTTCCAGGCATTGTACCACTTGATGAAGCGTTaGGTGCTCTGCAGCTTAGGGTGCAGGCAGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: FSFQALYHLMKR*VLCSLGCRQCS Trigger: GGAGCACTGCCTGCACCCTAAGCTGCAGAGCACCAAACGCTTCATCAAGTGGTACAATGCCTGGAACGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 72 bp | GACGATAACCATCTTCTCCTCGCAGTGTGGGTACTTTaGCTTCATTTCCAGCTTCTTCACGTCGCTGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: DDNHLLLAVWVL*LHFQLLHVAVA Trigger: CGCTACAGCGACGTGAAGAAGCTGGAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAGATGGTTATCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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| CDS CCA 72 bp | GACCATAACCATCTTCTCCTCGCAGTGTGGGTACTTTaGCTTCATTTCCAGCTTCTTCACGTCGCTGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: DHNHLLLAVWVL*LHFQLLHVAVA Trigger: CGCTACAGCGACGTGAAGAAGCTGGAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAGATGGTTATGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224801.2 |
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| CDS CCA 72 bp | CTTGGTGGTGACGATAACCATCTTCTCCTCGCAGTGTaGGTACTTTGGCTTCATTTCCAGCTTCTTCACGTC | + |
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Preference number: 6 (lower is better) Translates to: LGGDDNHLLLAV*VLWLHFQLLHV Trigger: GACGTGAAGAAGCTGGAAATGAAGCCAAAGTACCCACACTGCGAGGAGAAGATGGTTATCGTCACCACCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021970.11 |
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