Pregenerated sensors for CXCL12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061353Ensembl transcript IDs: ENSMUST00000073043.5, ENSMUST00000112866.8, ENSMUST00000112871.8
Found 225 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCGCCGGCCATCCTGGCCAGGGTTCAGGCCCTCCTCCCCACCACTaGCCTTGCATCTCCCACGGATGTCAGCCTTCCTCGGGGGTCTAC | + |
|
Preference number: 1 (lower is better) Translates to: PAGHPGQGSGPPPHH*PCISHGCQPSSGVY Trigger: GTAGACCCCCGAGGAAGGCTGACATCCGTGGGAGATGCAAGGGCAGTGGTGGGGAGGAGGGCCTGAACCCTGGCCAGGATGGCCGGCGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR GCA 90 bp | GGCCATCCTGGCCAGGGTTCAGGCCCTCCTCCCCACCACTGCCCTTaGATCTCCCACGGATGTCAGCCTTCCTCGGGGGTCTACTGGAAA | + |
|
Preference number: 1 (lower is better) Translates to: GHPGQGSGPPPHHCP*ISHGCQPSSGVYWK Trigger: TTTCCAGTAGACCCCCGAGGAAGGCTGACATCCGTGGGAGATGCAAGGGCAGTGGTGGGGAGGAGGGCCTGAACCCTGGCCAGGATGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CCA 90 bp | GAGGGACTGGCTACCTGGCAGGTTGCTTGGCGCCCAAGGGAATTCTaGCAGCCCCAGGACCAGCAGGGACAGCTAGGTGCCCTGGGTCAA | + |
|
Preference number: 1 (lower is better) Translates to: EGLATWQVAWRPREF*QPQDQQGQLGALGQ Trigger: TTGACCCAGGGCACCTAGCTGTCCCTGCTGGTCCTGGGGCTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 90 bp | TCCCGAGAAGGCCACAAGGGGCAGTGTGGCCGAGGGGAAGGCACTTaGCCTTTCCTGGCTAAGCAGACCACCCTGGCCTTCATGGGATTG | + |
|
Preference number: 1 (lower is better) Translates to: SREGHKGQCGRGEGT*PFLAKQTTLAFMGL Trigger: CAATCCCATGAAGGCCAGGGTGGTCTGCTTAGCCAGGAAAGGGCAAGTGCCTTCCCCTCGGCCACACTGCCCCTTGTGGCCTTCTCGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | CACCCTGGCCTTCATGGGATTGTAGGTGTGAGCCTTGTGAAGTCCTaGCCAAGGGGGCTCAGCTCGGGGCAATGCTGCCAGGCTAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: HPGLHGIVGVSLVKS*PRGLSSGQCCQARQ Trigger: CTGCCTAGCCTGGCAGCATTGCCCCGAGCTGAGCCCCCTTGGCCAGGACTTCACAAGGCTCACACCTACAATCCCATGAAGGCCAGGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 90 bp | TCTGGACTGGAGTCAAAGCTGCTCCCACAGGCAGGGCAGCAGGGCTaGAGGCTGCAGGTATTTGGAAAAGCTGCGGGTGGGCCTGAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: SGLESKLLPQAGQQG*RLQVFGKAAGGPES Trigger: GCTCTCAGGCCCACCCGCAGCTTTTCCAAATACCTGCAGCCTTCAGCCCTGCTGCCCTGCCTGTGGGAGCAGCTTTGACTCCAGTCCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 90 bp | GGCCACGCTTCCCAGAGCGGCACCAATCCCACCCTTCGGCTGTCTTaGGGAGAGGTAGGTAGTTCACCCCCTTTCCAGGGAAATGCCTGC | + |
|
Preference number: 1 (lower is better) Translates to: GHASQSGTNPTLRLS*GEVGSSPPFQGNAC Trigger: GCAGGCATTTCCCTGGAAAGGGGGTGAACTACCTACCTCTCCTCAAGACAGCCGAAGGGTGGGATTGGTGCCGCTCTGGGAAGCGTGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | GCCACAAGGGGCAGTGTGGCCGAGGGGAAGGCACTTGCCCTTTCCTaGCTAAGCAGACCACCCTGGCCTTCATGGGATTGTAGGTGTGAG | + |
|
Preference number: 1 (lower is better) Translates to: ATRGSVAEGKALALS*LSRPPWPSWDCRCE Trigger: CTCACACCTACAATCCCATGAAGGCCAGGGTGGTCTGCTTAGCCAGGAAAGGGCAAGTGCCTTCCCCTCGGCCACACTGCCCCTTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 90 bp | AAGAGTTTACCGTCAGGTTTGAGCACCTGCCCGGAGTGTGGGGTCTaGCCCCGAAGAGGGAGGAGCGAGTTACAAAGCGCCAGAGCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: KSLPSGLSTCPECGV*PRRGRSELQSARAE Trigger: CTCTGCTCTGGCGCTTTGTAACTCGCTCCTCCCTCTTCGGGGGCAGACCCCACACTCCGGGCAGGTGCTCAAACCTGACGGTAAACTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | GCCGAGGGGAAGGCACTTGCCCTTTCCTGGCTAAGCAGACCACCCTaGCCTTCATGGGATTGTAGGTGTGAGCCTTGTGAAGTCCTGGCC | + |
|
Preference number: 1 (lower is better) Translates to: AEGKALALSWLSRPP*PSWDCRCEPCEVLA Trigger: GGCCAGGACTTCACAAGGCTCACACCTACAATCCCATGAAGGCCAGGGTGGTCTGCTTAGCCAGGAAAGGGCAAGTGCCTTCCCCTCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | ATGCAAAGGCTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTTaGCGCCCAAGGGAATTCTGGCAGCCCCAGGACCAGCAGGGACAG | + |
|
Preference number: 1 (lower is better) Translates to: MQRLVTEGLATWQVA*RPREFWQPQDQQGQ Trigger: CTGTCCCTGCTGGTCCTGGGGCTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTTTGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 90 bp | CGGCCGCTGAGGATCTGGATGGTGGCGGGAAGCAGAGAAGATGGGTaGACATGTCAAGCACAGGGTGAGGCAGACACACACTGGCACAGA | + |
|
Preference number: 1 (lower is better) Translates to: RPLRIWMVAGSREDG*TCQAQGEADTHWHR Trigger: TCTGTGCCAGTGTGTGTCTGCCTCACCCTGTGCTTGACATGTTCACCCATCTTCTCTGCTTCCCGCCACCATCCAGATCCTCAGCGGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | CTTTCTGCGTCTCACCCAACACAGTCTGCAGAAACCCTTCTGGACTaGAGTCAAAGCTGCTCCCACAGGCAGGGCAGCAGGGCTGAAGGC | + |
|
Preference number: 1 (lower is better) Translates to: LSASHPTQSAETLLD*SQSCSHRQGSRAEG Trigger: GCCTTCAGCCCTGCTGCCCTGCCTGTGGGAGCAGCTTTGACTCCAGTCCAGAAGGGTTTCTGCAGACTGTGTTGGGTGAGACGCAGAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | CTGGCCTCACGTTCCTGCCTCAGCTTGGGAAAGCCCTGCAGTCCTTaGGGGGTGGGAACACCCAGTTCCTATTCAGAAGAATGGGTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LASRSCLSLGKPCSP*GVGTPSSYSEEWVS Trigger: GCTCACCCATTCTTCTGAATAGGAACTGGGTGTTCCCACCCCCCAAGGACTGCAGGGCTTTCCCAAGCTGAGGCAGGAACGTGAGGCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 90 bp | CACCCAACACAGTCTGCAGAAACCCTTCTGGACTGGAGTCAAAGCTaGTCCCACAGGCAGGGCAGCAGGGCTGAAGGCTGCAGGTATTTG | + |
|
Preference number: 1 (lower is better) Translates to: HPTQSAETLLDWSQS*SHRQGSRAEGCRYL Trigger: CAAATACCTGCAGCCTTCAGCCCTGCTGCCCTGCCTGTGGGAGCAGCTTTGACTCCAGTCCAGAAGGGTTTCTGCAGACTGTGTTGGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 90 bp | GTTGACAAGAACAGAGGAGACACATTAAGGCAGTTTCTCACCACATaGCTGGGATGCTGCGTGCGTGGCCTAGCGCTGAGCCACAGGCCC | + |
|
Preference number: 1 (lower is better) Translates to: VDKNRGDTLRQFLTT*LGCCVRGLALSHRP Trigger: GGGCCTGTGGCTCAGCGCTAGGCCACGCACGCAGCATCCCAGGCATGTGGTGAGAAACTGCCTTAATGTGTCTCCTCTGTTCTTGTCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | AAGGCACTTGCCCTTTCCTGGCTAAGCAGACCACCCTGGCCTTCATaGGATTGTAGGTGTGAGCCTTGTGAAGTCCTGGCCAAGGGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: KALALSWLSRPPWPS*DCRCEPCEVLAKGA Trigger: AGCCCCCTTGGCCAGGACTTCACAAGGCTCACACCTACAATCCCATGAAGGCCAGGGTGGTCTGCTTAGCCAGGAAAGGGCAAGTGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | TCATCCTTTCTGCGTCTCACCCAACACAGTCTGCAGAAACCCTTCTaGACTGGAGTCAAAGCTGCTCCCACAGGCAGGGCAGCAGGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: SSFLRLTQHSLQKPF*TGVKAAPTGRAAGL Trigger: CAGCCCTGCTGCCCTGCCTGTGGGAGCAGCTTTGACTCCAGTCCAGAAGGGTTTCTGCAGACTGTGTTGGGTGAGACGCAGAAAGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | TTCCCTATCCAGATGCAAAGGCTTGTAACAGAGGGACTGGCTACCTaGCAGGTTGCTTGGCGCCCAAGGGAATTCTGGCAGCCCCAGGAC | + |
|
Preference number: 1 (lower is better) Translates to: FPIQMQRLVTEGLAT*QVAWRPREFWQPQD Trigger: GTCCTGGGGCTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTTTGCATCTGGATAGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | TTGGCTGGTTCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTaGTCTCTGGAGCTGCAGGTCCTTCCGGAAGGCGTTTATGCTAGA | + |
|
Preference number: 1 (lower is better) Translates to: LAGSTPPEEVLVLRR*SLELQVLPEGVYAR Trigger: TCTAGCATAAACGCCTTCCGGAAGGACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 90 bp | CGTTTGGAGGCAAGCAGAGAGCAGGAACGGCTAGGAAAGGGTCTCTaGGCACAGCTTCAGGGATCACTTCTAAAGGAAGCTTCCCGACCC | + |
|
Preference number: 1 (lower is better) Translates to: RLEASREQERLGKGL*AQLQGSLLKEASRP Trigger: GGGTCGGGAAGCTTCCTTTAGAAGTGATCCCTGAAGCTGTGCTCAGAGACCCTTTCCTAGCCGTTCCTGCTCTCTGCTTGCCTCCAAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR GCA 90 bp | CAGCAAAACTGTGCAAAGCAAGTCCCTTGCAAACGGCTTCAGCCCTaGTCAGGAGCAGAGGAAGTGGCTATGGGCCCTTCCCTAACACTG | + |
|
Preference number: 1 (lower is better) Translates to: QQNCAKQVPCKRLQP*SGAEEVAMGPSLTL Trigger: CAGTGTTAGGGAAGGGCCCATAGCCACTTCCTCTGCTCCTGAGCAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGCACAGTTTTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | GTTCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTGGTCTCTaGAGCTGCAGGTCCTTCCGGAAGGCGTTTATGCTAGACAGTGTA | + |
|
Preference number: 1 (lower is better) Translates to: VPHHQKRSWCSGGGL*SCRSFRKAFMLDSV Trigger: TACACTGTCTAGCATAAACGCCTTCCGGAAGGACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | TCAGAAGAATGGGTGAGCCTCCTGCCTCAGCTCAAAGGACAAACCTaGGGAGCCACTACTCAGAGAAGGTCCTCCAAGGGAAGGATACCA | + |
|
Preference number: 1 (lower is better) Translates to: SEEWVSLLPQLKGQT*GATTQRRSSKGRIP Trigger: TGGTATCCTTCCCTTGGAGGACCTTCTCTGAGTAGTGGCTCCCCAGGTTTGTCCTTTGAGCTGAGGCAGGAGGCTCACCCATTCTTCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | GACACCACTGAGATAATCACCCATGAGAGGATAAACAGAACCCACTaGAGAGGCCCGAAAGGCCTCAGGCCAAGTCCCTCAGAGGAATGC | + |
|
Preference number: 1 (lower is better) Translates to: DTTEIITHERINRTH*RGPKGLRPSPSEEC Trigger: GCATTCCTCTGAGGGACTTGGCCTGAGGCCTTTCGGGCCTCTCCAGTGGGTTCTGTTTATCCTCTCATGGGTGATTATCTCAGTGGTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | TCAGGGATCACTTCTAAAGGAAGCTTCCCGACCCTGGCACTGAACTaGATAAAGGAGCCTCCCTCTGCCGGATCTTGTGTTGACTCAGGA | + |
|
Preference number: 1 (lower is better) Translates to: SGITSKGSFPTLALN*IKEPPSAGSCVDSG Trigger: TCCTGAGTCAACACAAGATCCGGCAGAGGGAGGCTCCTTTATCCAGTTCAGTGCCAGGGTCGGGAAGCTTCCTTTAGAAGTGATCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR TCA 90 bp | GCAAACCACCTTTCTTTGGGCTTTGTGTGTCTAAAATGGGCCCCCTaGGAAGGGAGACAGCAGGGCTCTTTCCATGACTACAACCTGGAC | + |
|
Preference number: 1 (lower is better) Translates to: ANHLSLGFVCLKWAP*EGRQQGSFHDYNLD Trigger: GTCCAGGTTGTAGTCATGGAAAGAGCCCTGCTGTCTCCCTTCTCAGGGGGCCCATTTTAGACACACAAAGCCCAAAGAAAGGTGGTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 90 bp | AATGAGATTACCTTAAAATGGGCCAGGGTAGCTGTTTGGAGAGAATaGATCCCTGGCTCTCATCCAGCTGAAAAGGGTGCACGGCCTGGG | + |
|
Preference number: 1 (lower is better) Translates to: NEITLKWARVAVWRE*IPGSHPAEKGARPG Trigger: CCCAGGCCGTGCACCCTTTTCAGCTGGATGAGAGCCAGGGATGCATTCTCTCCAAACAGCTACCCTGGCCCATTTTAAGGTAATCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 90 bp | AGGGATGTTGGGACCAAAAGTGGGGAAGGACAGACTAAGAGTCCCTaGAGCTGCTGGTCCTTCAGAAAGTTCCAGAGCACATCTATCCTC | + |
|
Preference number: 1 (lower is better) Translates to: RDVGTKSGEGQTKSP*SCWSFRKFQSTSIL Trigger: GAGGATAGATGTGCTCTGGAACTTTCTGAAGGACCAGCAGCTTCAGGGACTCTTAGTCTGTCCTTCCCCACTTTTGGTCCCAACATCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 90 bp | CCTGAGAAGTCGCAGGAGCACATCCTACTTCAACCCATCCTTAGATaGAATCAGCTTCCCAGGCATTTCCATGAGGACTCTGTCCAGTGG | + |
|
Preference number: 1 (lower is better) Translates to: PEKSQEHILLQPILR*NQLPRHFHEDSVQW Trigger: CCACTGGACAGAGTCCTCATGGAAATGCCTGGGAAGCTGATTTCATCTAAGGATGGGTTGAAGTAGGATGTGCTCCTGCGACTTCTCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 90 bp | TGGAAGGCTGTATTTGTTTCCTCCCAAGCAACACCCTTCAAAGCTTaGATTAGATGCAAAGTGGCTGGTGCACAGCAAGCCAGTGTGTGG | + |
|
Preference number: 1 (lower is better) Translates to: WKAVFVSSQATPFKA*IRCKVAGAQQASVW Trigger: CCACACACTGGCTTGCTGTGCACCAGCCACTTTGCATCTAATCCAAGCTTTGAAGGGTGTTGCTTGGGAGGAAACAAATACAGCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 90 bp | TTTCCTGAGAAGCAGCTGACATGTGTTCTGAGATTTCATCCTTTCTaGGTCTCACCCAACACAGTCTGCAGAAACCCTTCTGGACTGGAG | + |
|
Preference number: 1 (lower is better) Translates to: FPEKQLTCVLRFHPF*VSPNTVCRNPSGLE Trigger: CTCCAGTCCAGAAGGGTTTCTGCAGACTGTGTTGGGTGAGACGCAGAAAGGATGAAATCTCAGAACACATGTCAGCTGCTTCTCAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 90 bp | GGATTTCATCTCGAGAGTCCTTTTTCAGGGTCATGGAGACAGTCTTaGGGACACATGGCGATGAATGGATGGATGGATGGATGGATGAGA | + |
|
Preference number: 1 (lower is better) Translates to: GFHLESPFSGSWRQS*GHMAMNGWMDGWMR Trigger: TCTCATCCATCCATCCATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAAGGACTCTCGAGATGAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | TTTCCTCCCAAGCAACACCCTTCAAAGCTTGGATTAGATGCAAAGTaGCTGGTGCACAGCAAGCCAGTGTGTGGTTTCTATTCCAGGGTT | + |
|
Preference number: 1 (lower is better) Translates to: FPPKQHPSKLGLDAK*LVHSKPVCGFYSRV Trigger: AACCCTGGAATAGAAACCACACACTGGCTTGCTGTGCACCAGCCACTTTGCATCTAATCCAAGCTTTGAAGGGTGTTGCTTGGGAGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | TTTGTGGGTAAATCTAGGCATGTTCTCACATTATCCAGGATGGTCTaGCTCCATTCTACAGGAGGCCAAAGAAAAATCTCACAAAGGGCC | + |
|
Preference number: 1 (lower is better) Translates to: FVGKSRHVLTLSRMV*LHSTGGQRKISQRA Trigger: GGCCCTTTGTGAGATTTTTCTTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGATAATGTGAGAACATGCCTAGATTTACCCACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CCA 90 bp | CATTTGAATAAAGGATTTCATCTCGAGAGTCCTTTTTCAGGGTCATaGAGACAGTCTTGCGGACACATGGCGATGAATGGATGGATGGAT | + |
|
Preference number: 1 (lower is better) Translates to: HLNKGFHLESPFSGS*RQSCGHMAMNGWMD Trigger: ATCCATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAAGGACTCTCGAGATGAAATCCTTTATTCAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | TGTGTTTTGTGGGTAAATCTAGGCATGTTCTCACATTATCCAGGATaGTCTGGCTCCATTCTACAGGAGGCCAAAGAAAAATCTCACAAA | + |
|
Preference number: 1 (lower is better) Translates to: CVLWVNLGMFSHYPG*SGSILQEAKEKSHK Trigger: TTTGTGAGATTTTTCTTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGATAATGTGAGAACATGCCTAGATTTACCCACAAAACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR TCA 90 bp | CCCACTAACAATTCTACAGAGTATTCACTCTCAAACACCTGTTTTTaGAGACTATCTTTCTGTAGCTTACTTCCCCGTCTTTCTCGAGTG | + |
|
Preference number: 1 (lower is better) Translates to: PTNNSTEYSLSNTCF*RLSFCSLLPRLSRV Trigger: CACTCGAGAAAGACGGGGAAGTAAGCTACAGAAAGATAGTCTTCAAAAACAGGTGTTTGAGAGTGAATACTCTGTAGAATTGTTAGTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 90 bp | TCATTTAAACTTCCGTTTATGATTAATTCTCAGACTTGTGTTTTGTaGGTAAATCTAGGCATGTTCTCACATTATCCAGGATGGTCTGGC | + |
|
Preference number: 1 (lower is better) Translates to: SFKLPFMINSQTCVL*VNLGMFSHYPGWSG Trigger: GCCAGACCATCCTGGATAATGTGAGAACATGCCTAGATTTACCCACAAAACACAAGTCTGAGAATTAATCATAAACGGAAGTTTAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CCA 90 bp | TTGCTAGTGCATATAATGTCACAGTTGATACAATTTCATTCCAAGTaGAAAAATACACCGTGGCTGACACCGGAAAGCTACAATACATTT | + |
|
Preference number: 1 (lower is better) Translates to: LLVHIMSQLIQFHSK*KNTPWLTPESYNTF Trigger: AAATGTATTGTAGCTTTCCGGTGTCAGCCACGGTGTATTTTTCCACTTGGAATGAAATTGTATCAACTGTGACATTATATGCACTAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CCA 90 bp | TTTTATCTTGTCTCCATTTCTGATTGGAACCCAGAATCCCCACTGTaGCTTCATGGCAAGATTCTGGCTTATTCGTTATTATTATTATTA | + |
|
Preference number: 1 (lower is better) Translates to: FYLVSISDWNPESPL*LHGKILAYSLLLLL Trigger: TAATAATAATAATAACGAATAAGCCAGAATCTTGCCATGAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGGAGACAAGATAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGACAGCGTGGGATGAGGGTGAAGCTCACTCTTCCCTGGCCTCACGTTCCTGGTGCCCAGTGTTCCTaGGCATCCCCAGGCCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GGQRGMRVKLTLPWPHVPGAQCS*ASPGLR Trigger: TCTGAGGCCTGGGGATGCCCAGGAACACTGGGCACC...AGGAACGTGAGGCCAGGGAAGAGTGAGCTTCACCCTCATCCCACGCTGTCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTCAGGCCAAGTCCCTCAGAGGAATGCAGCCCCTTGCCCTCCAAACCCTCTCTAGCTGCGGGTGGGCCTaGGAGCAAGTCAGTTACCAC | + |
|
Preference number: 2 (lower is better) Translates to: PQAKSLRGMQPLALQTLSSCGWA*EQVSYH Trigger: GTGGTAACTGACTTGCTCTCAGGCCCACCCGCAGCT...AGAGAGGGTTTGGAGGGCAAGGGGCTGCATTCCTCTGAGGGACTTGGCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCCCCTGAGAAGGGAGACAGCAGGGCTCTTTCCATGACTACAACCTGGACCGCAGGGCAGCAGGGCTaGAGGCTGCAGGTATTTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GPPEKGDSRALSMTTTWTAGQQG*RLQVFG Trigger: TCCAAATACCTGCAGCCTTCAGCCCTGCTGCCCTGC...GGTCCAGGTTGTAGTCATGGAAAGAGCCCTGCTGTCTCCCTTCTCAGGGGGCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | GGAGGACAGCGTGGGATGAGGGTGAAGCTCACTCTTCCCTGGCCTCACGTTCCTCCCCTCTCACCTGCCTaGGAAGTCGCAGGAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: GGQRGMRVKLTLPWPHVPPLSPA*EVAGAH Trigger: ATGTGCTCCTGCGACTTCTCAGGCAGGTGAGAGGGG...AGGAACGTGAGGCCAGGGAAGAGTGAGCTTCACCCTCATCCCACGCTGTCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | GATGCAAAGGCTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTaGGCGCCCAAGGGAATTCTGGCAGCCCCAGGACCAGCAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: DAKACNRGTGYLAGC*APKGILAAPGPAGT Trigger: TGTCCCTGCTGGTCCTGGGGCTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTTTGCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 90 bp | GGCCCGAAAGGCCTCAGGCCAAGTCCCTCAGAGGAATGCAGCCCCTaGCCCTCCAAACCCTCTCTCAAAGCCGATCAGGCAATGAACCAG | + |
|
Preference number: 2 (lower is better) Translates to: GPKGLRPSPSEECSP*PSKPSLKADQAMNQ Trigger: CTGGTTCATTGCCTGATCGGCTTTGAGAGAGGGTTTGGAGGGCAAGGGGCTGCATTCCTCTGAGGGACTTGGCCTGAGGCCTTTCGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACTCCTGGGGCCACGCTTCCCAGAGCGGCACCAATCCCACCCTTCGGCTGTCGAAACCCTTCTGGACTaGAGTCAAAGCTGCTCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: KLLGPRFPERHQSHPSAVETLLD*SQSCSH Trigger: GTGGGAGCAGCTTTGACTCCAGTCCAGAAGGGTTTC...GACAGCCGAAGGGTGGGATTGGTGCCGCTCTGGGAAGCGTGGCCCCAGGAGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCTGGTTCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTGGTCTCTGAGGACTCTGTCCAGTaGGCTGGGGTTGCCCACCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGWFHTTRRGLGAQEVVSEDSVQ*AGVAHQ Trigger: CTGGTGGGCAACCCCAGCCCACTGGACAGAGTCCTC...AGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | AGCTGCTCCCACAGGCAGGGCAGCAGGGCTGAAGGCTGCAGGTATTaGGAAAAGCTGCGGGTGGGCCTGAGAGCAAGTCAGTTACCACAT | + |
|
Preference number: 2 (lower is better) Translates to: SCSHRQGSRAEGCRY*EKLRVGLRASQLPH Trigger: ATGTGGTAACTGACTTGCTCTCAGGCCCACCCGCAGCTTTTCCAAATACCTGCAGCCTTCAGCCCTGCTGCCCTGCCTGTGGGAGCAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGAAGGTTTCTCTCTAGGGCTCCCTGCAAAGCCACCGTCTATAACTGTGCCCCTCCTCCCCACCACTaGCCTTGCATCTCCCACGGA | + |
|
Preference number: 2 (lower is better) Translates to: GGRFLSRAPCKATVYNCAPPPHH*PCISHG Trigger: TCCGTGGGAGATGCAAGGGCAGTGGTGGGGAGGAGG...GGCACAGTTATAGACGGTGGCTTTGCAGGGAGCCCTAGAGAGAAACCTTCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTACCCCTCGGCTGCACTTCCTTGCTAAAGTCCCACTGTCCTCGGGAGCCAGAGTGTCCAGCCAGCTaGCTGCCACCCTCCTTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SLPLGCTSLLKSHCPREPECPAS*LPPSFL Trigger: AAGGAAGGAGGGTGGCAGCCAGCTGGCTGGACACTC...TGGCTCCCGAGGACAGTGGGACTTTAGCAAGGAAGTGCAGCCGAGGGGTAAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGCTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTTGGCGCCCAAGGGAAACACGGGTCTTCCCTaGATCCCCCTAGCAAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: KACNRGTGYLAGCLAPKGNTGLP*IPLARL Trigger: GAGTCTTGCTAGGGGGATTCAGGGAAGACCCGTGTT...TCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | CTTGGCTGGTTCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTGGTCTCTTCCCAGGCATTTCCATaGGGACTCTGTCCAGTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LGWFHTTRRGLGAQEVVSSQAFP*GLCPVG Trigger: GCCCACTGGACAGAGTCCTCATGGAAATGCCTGGGA...AGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | TCTTTACCCCTCGGCTGCACTTCCTTGCTAAAGTCCCACTGTCCTCGGGAGCCAACTACCCCTCTCACCTaGCTGAGAAGTCGCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLPLGCTSLLKSHCPREPTTPLT*LRSRRS Trigger: GCTCCTGCGACTTCTCAGGCAGGTGAGAGGGGTAGT...TGGCTCCCGAGGACAGTGGGACTTTAGCAAGGAAGTGCAGCCGAGGGGTAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCAGAGGACAAAACTCCTGGGGCCACGCTTCCCAGAGCGGCACCAATCCCACTAAGCAGACCACCCTaGCCTTCATGGGATTGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: TAEDKTPGATLPRAAPIPLSRPP*PSWDCR Trigger: CCTACAATCCCATGAAGGCCAGGGTGGTCTGCTTAG...TGGGATTGGTGCCGCTCTGGGAAGCGTGGCCCCAGGAGTTTTGTCCTCTGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | AGGATGGAGACCGTGGTGCCCAGACAGCACACCATCCCAGGGATGTaGGGACCAAAAGTGGGGAAGGACAGACTAAGAGTCCCTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: RMETVVPRQHTIPGM*GPKVGKDRLRVPEA Trigger: AGCTTCAGGGACTCTTAGTCTGTCCTTCCCCACTTTTGGTCCCAACATCCCTGGGATGGTGTGCTGTCTGGGCACCACGGTCTCCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | CTAAAGTCCCACTGTCCTCGGGAGCCAGCAGCAGTGTATAAACACAGGGTACAACTCAGCTCGGGGCAATaGTGCCAGGCTAGGCAGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LKSHCPREPAAVYKHRVQLSSGQ*CQARQL Trigger: GAGCTGCCTAGCCTGGCAGCATTGCCCCGAGCTGAG...TTGTACCCTGTGTTTATACACTGCTGCTGGCTCCCGAGGACAGTGGGACTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | AGTCCCTCAGAGGAATGCAGCCCCTTGCCCTCCAAACCCTCTCTCAAAGCCGATGAGACTGTAGCCGGCTaGCACAGGACAAACAGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: SPSEECSPLPSKPSLKADETVAG*HRTNSS Trigger: GCTACTGTTTGTCCTGTGGCAGCCGGCTACAGTCTC...ATCGGCTTTGAGAGAGGGTTTGGAGGGCAAGGGGCTGCATTCCTCTGAGGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCTGGTTCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTGGTCTCTAAGGCTGCAGGTATTTaGAAAAGCTGCGGGTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LGWFHTTRRGLGAQEVVSKAAGI*KSCGWA Trigger: GGCCCACCCGCAGCTTTTCCAAATACCTGCAGCCTT...AGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGCTGGTTCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTGGTCTCTAGGGCAGCCTCAGTTTaGCCTTTGGTTTCTAGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LGWFHTTRRGLGAQEVVSRAASV*PLVSRG Trigger: GCCCCTAGAAACCAAAGGCCAAACTGAGGCTGCCCT...AGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | GACTTTGAAAGGATCCCTAACTGGAGTGAAGATGGAAGGCTGTATTTGTTTCCTGAACCCAAGAGGGCATaGCACACAGGGCCCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: DFERIPNWSEDGRLYLFPEPKRA*HTGPWA Trigger: GGCCCAGGGCCCTGTGTGTCATGCCCTCTTGGGTTC...AGGAAACAAATACAGCCTTCCATCTTCACTCCAGTTAGGGATCCTTTCAAAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | GCAGAGGAAGTGGCTATGGGCCCTTCCCTAACACTGACTTCAGACCTAGGCTCCAGATTTCATCCTTTCTaGGTCTCACCCAACACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: AEEVAMGPSLTLTSDLGSRFHPF*VSPNTV Trigger: GACTGTGTTGGGTGAGACGCAGAAAGGATGAAATCT...GGAGCCTAGGTCTGAAGTCAGTGTTAGGGAAGGGCCCATAGCCACTTCCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | CGGCTCCCTAAAGTTTCTACCCTTCTCTTTTTCCTCACTGTGAAGGAGACTTTGGGATGGAGACCGTGGTaGCCAGACAGCACACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: RLPKVSTLLFFLTVKETLGWRPW*PDSTPS Trigger: GGATGGTGTGCTGTCTGGGCACCACGGTCTCCATCC...CAAAGTCTCCTTCACAGTGAGGAAAAAGAGAAGGGTAGAAACTTTAGGGAGCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | AAACAGTCTGCACAGACAGCTCTGCTAGGAGTGAGAGACGAATGGTaGGGAGGCAGAGTCCATGGGCATTTCAGAAAGTGGTCTTCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: KQSAQTALLGVRDEW*GGRVHGHFRKWSSN Trigger: GTTGGAAGACCACTTTCTGAAATGCCCATGGACTCTGCCTCCCAACCATTCGTCTCTCACTCCTAGCAGAGCTGTCTGTGCAGACTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGCTCTTTCCATGACTACAACCTGGACCTCGGGGCCATCACCTCACACTCAATAATCACTCTTCCTTaGAATCTCTTGGCTGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSFHDYNLDLGAITSHSIITLP*NLLAGS Trigger: GGAACCAGCCAAGAGATTTCAAGGAAGAGTGATTAT...TGAGTGTGAGGTGATGGCCCCGAGGTCCAGGTTGTAGTCATGGAAAGAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTTTCAGGGTCATGGAGACAGTCTTGCGGACACATGGCGATGAATGGATGGATAAACGGCTTCAGCCCTaGTCAGGAGCAGAGGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FFRVMETVLRTHGDEWMDKRLQP*SGAEEV Trigger: CACTTCCTCTGCTCCTGAGCAGGGCTGAAGCCGTTT...ATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCAGGGTCATGGAGACAGTCTTGCGGACACATGGCGATGAATGGATGGATCCATCCCAGGGATGTTaGGACCAAAAGTGGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: FFRVMETVLRTHGDEWMDPSQGC*DQKWGR Trigger: CCTTCCCCACTTTTGGTCCCAACATCCCTGGGATGG...ATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | AGTGGCTGGTGCACAGCAAGCCAGTGTGTGGTTTCTATTCCAGGGTaGAAAATAATTCGCTATCCTCCTGAGGATCCAGCTCTGCAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: SGWCTASQCVVSIPG*KIIRYPPEDPALQL Trigger: TAGCTGCAGAGCTGGATCCTCAGGAGGATAGCGAATTATTTTCAACCCTGGAATAGAAACCACACACTGGCTTGCTGTGCACCAGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTTTCAGGGTCATGGAGACAGTCTTGCGGACACATGGCGATGAATGGATGGATGAGGCAGACACACACTaGCACAGATGGCATGGTACA | + |
|
Preference number: 2 (lower is better) Translates to: FFRVMETVLRTHGDEWMDEADTH*HRWHGT Trigger: TGTACCATGCCATCTGTGCCAGTGTGTGTCTGCCTC...ATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | AGGATTTCATCTCGAGAGTCCTTTTTCAGGGTCATGGAGACAGTCTaGCGGACACATGGCGATGAATGGATGGATGGATGGATGGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: RISSRESFFRVMETV*RTHGDEWMDGWMDE Trigger: CTCATCCATCCATCCATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAAGGACTCTCGAGATGAAATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTGCCCACCAGACGAGCTTCATAAGCACAGAGGGTTCCCTGGAGCTTGCTGTGTTTCTGCACCAATTATaGAAATTATACCCAGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VAHQTSFISTEGSLELAVFLHQL*KLYPEV Trigger: GACCTCTGGGTATAATTTTCATAATTGGTGCAGAAA...CACAGCAAGCTCCAGGGAACCCTCTGTGCTTATGAAGCTCGTCTGGTGGGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | TTTCAACACAAAGCAGACTGTATGTCTCCACCCCTTTCCCTATCCAGATGCAAAAAACGGCTTCAGCCCTaGTCAGGAGCAGAGGAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: FQHKADCMSPPLSLSRCKKRLQP*SGAEEV Trigger: CACTTCCTCTGCTCCTGAGCAGGGCTGAAGCCGTTT...TTTGCATCTGGATAGGGAAAGGGGTGGAGACATACAGTCTGCTTTGTGTTGAAA 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGAGACCTGTTACTCCTCAACAGAAGAATGCATTTGGTTCCAGGAAGGTAAAAATGAGCATGGTGGGTTaGGGAGGACAGCGTGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: LRPVTPQQKNAFGSRKVKMSMVG*GGQRGM Trigger: CATCCCACGCTGTCCTCCTCAACCCACCATGCTCAT...TTTTACCTTCCTGGAACCAAATGCATTCTTCTGTTGAGGAGTAACAGGTCTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGTTTCTCTCTAGGGCTCCCTGCAAAGCCACCGTCTATAACTGTGCCCAGAGGACTGAATACAGCCCTTaGAGTAATCACTGCTTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: RFLSRAPCKATVYNCAQRTEYSP*SNHCFL Trigger: TAAAAAGCAGTGATTACTTCAAGGGCTGTATTCAGT...CCTCTGGGCACAGTTATAGACGGTGGCTTTGCAGGGAGCCCTAGAGAGAAACCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CCA 90 bp | TATCCAGGATGGTCTGGCTCCATTCTACAGGAGGCCAAAGAAAAATCTCACAAATCCTCGGGGGTCTACTaGAAAGTCCTTTGGGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: YPGWSGSILQEAKEKSHKSSGVY*KVLWAV Trigger: AACAGCCCAAAGGACTTTCCAGTAGACCCCCGAGGA...TTTGTGAGATTTTTCTTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CAA 90 bp | CCACCAGGGCCGTCTGTGATCATAAGAATGTATGCAAGTTTTATCTaGTCTCCATTTCTGATTGGAACCCAGAATCCCCACTGTGGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PPGPSVIIRMYASFI*SPFLIGTQNPHCGF Trigger: GAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGGAGACAAGATAAAACTTGCATACATTCTTATGATCACAGACGGCCCTGGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGAGACCTGTTACTCCTCAACAGAAGAATGCATTTGGTTCCAGGAAGGTAAAACATAAATACAGCAGCTaGTGTGGCCACCAGGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: LRPVTPQQKNAFGSRKVKHKYSS*CGHQGR Trigger: CCTGCCCTGGTGGCCACACCAGCTGCTGTATTTATG...TTTTACCTTCCTGGAACCAAATGCATTCTTCTGTTGAGGAGTAACAGGTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CAA 90 bp | ATAATAAAATGTGAAAGTACAGCAAAACTGTGCAAAGCAAGTCCCTaGCAAACGGCTTCAGCCCTGCTCAGGAGCAGAGGAAGTGGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: IIKCESTAKLCKASP*QTASALLRSRGSGY Trigger: ATAGCCACTTCCTCTGCTCCTGAGCAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGCACAGTTTTGCTGTACTTTCACATTTTATTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGAGACCTGTTACTCCTCAACAGAAGAATGCATTTGGTTCCAGGAAGGTAAAACCCTGGAGCTTGCTGTaGCTCCTAAGAAACAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LRPVTPQQKNAFGSRKVKPWSLL*LLRNSL Trigger: CAGACTGTTTCTTAGGAGGCACAGCAAGCTCCAGGG...TTTTACCTTCCTGGAACCAAATGCATTCTTCTGTTGAGGAGTAACAGGTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | AAGAATGTATGCAAGTTTTATCTTGTCTCCATTTCTGATTGGAACCCAGAATCCTGGCAAACCTTAGCATaGCCCCAGTCAGTGCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: KNVCKFYLVSISDWNPESWQTLA*PQSVLS Trigger: GGACAGCACTGACTGGGGTCATGCTAAGGTTTGCCA...GGATTCTGGGTTCCAATCAGAAATGGAGACAAGATAAAACTTGCATACATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTAAATAAATTCCCACATACGGTAGGAGGTTTACAGCATGAAACAATTAGCCACAAAGGGCCCAAGTaGGAGGAAAGCAAAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QVNKFPHTVGGLQHETISHKGPK*EESKGK Trigger: CTTCCCTTTGCTTTCCTCTCACTTGGGCCCTTTGTG...GCTAATTGTTTCATGCTGTAAACCTCCTACCGTATGTGGGAATTTATTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCCCCTGCAATCCATTTAACACATCTTCAGATCATTTCTTCTTTCTGCACCCTCCACCCCAGTCTCTaGACATCTTTCTTCATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PSPAIHLTHLQIISSFCTLHPSL*TSFFIA Trigger: AGCTATGAAGAAAGATGTGCAGAGACTGGGGTGGAG...GGTGCAGAAAGAAGAAATGATCTGAAGATGTGTTAAATGGATTGCAGGGGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAACAAACAAACAAACAAAAACAGACAAATATTGCCAGGTGAGGGTAGTGCGAGGGGAAGGCACTTaGCCTTTCCTGGCTAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: KQTNKQTKTDKYCQVRVVRGEGT*PFLAKQ Trigger: CTGCTTAGCCAGGAAAGGGCAAGTGCCTTCCCCTCG...CACTACCCTCACCTGGCAATATTTGTCTGTTTTTGTTTGTTTGTTTGTTTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | CCATTTCTGATTGGAACCCAGAATCCCCACTGTGGCTTCATGGCAAGATTCTGGGGGATGAATATAAGCTaGAATATCGTACCATATGCT | + |
|
Preference number: 2 (lower is better) Translates to: PFLIGTQNPHCGFMARFWGMNIS*NIVPYA Trigger: AGCATATGGTACGATATTGCAGCTTATATTCATCCC...CCAGAATCTTGCCATGAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR GCA 90 bp | ATATTAAAAATAAGAATAAGAAAGCACACGCTGCATATAGGAAGCTGCCTTCTCGCAAAGCAAGTCCCTTaGAAACGGCTTCAGCCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: ILKIRIRKHTLHIGSCLLAKQVP*KRLQPC Trigger: GCAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGC...GAGAAGGCAGCTTCCTATATGCAGCGTGTGCTTTCTTATTCTTATTTTTAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTAAATAAATTCCCACATACGGTAGGAGGTTTACAGCATGAAACAATTAGCCCAGAATCCCCACTGTaGCTTCATGGCAAGATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QVNKFPHTVGGLQHETISPESPL*LHGKIL Trigger: CAGAATCTTGCCATGAAGCCACAGTGGGGATTCTGG...GCTAATTGTTTCATGCTGTAAACCTCCTACCGTATGTGGGAATTTATTTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CAA 90 bp | CCTAAAGTTTCTACCCTTCTCTTTTTCCTCACTGTGAAGGAGACTTaGAAAGGATCCCTAACTGGAGTGAAGATGGAAGGCTGTATTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PKVSTLLFFLTVKET*KGSLTGVKMEGCIC Trigger: ACAAATACAGCCTTCCATCTTCACTCCAGTTAGGGATCCTTTCAAAGTCTCCTTCACAGTGAGGAAAAAGAGAAGGGTAGAAACTTTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR TCA 90 bp | ATATTAAAAATAAGAATAAGAAAGCACACGCTGCATATAGGAAGCTGCCTTCTCCAGACTAAGAGTCCCTaGAGCTGCTGGTCCTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: ILKIRIRKHTLHIGSCLLQTKSP*SCWSFR Trigger: TCTGAAGGACCAGCAGCTTCAGGGACTCTTAGTCTG...GAGAAGGCAGCTTCCTATATGCAGCGTGTGCTTTCTTATTCTTATTTTTAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTTCCCCTGCAATCCATTTAACACATCTTCAGATCATTTCTTCTTTCTGCACCAAAGAAAAGATTTCCTaGGAAGCAGCTGACATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PSPAIHLTHLQIISSFCTKEKIS*EAADMC Trigger: ACACATGTCAGCTGCTTCTCAGGAAATCTTTTCTTT...GGTGCAGAAAGAAGAAATGATCTGAAGATGTGTTAAATGGATTGCAGGGGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCCCCTGCAATCCATTTAACACATCTTCAGATCATTTCTTCTTTCTGCACCAAAACAGACAAATATTaGCAGGTGAGGGTAGTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: PSPAIHLTHLQIISSFCTKTDKY*QVRVVD Trigger: ATCCACTACCCTCACCTGGCAATATTTGTCTGTTTT...GGTGCAGAAAGAAGAAATGATCTGAAGATGTGTTAAATGGATTGCAGGGGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR TCA 90 bp | CCTGCAATCCATTTAACACATCTTCAGATCATTTCTTCTTTCTGCACCAATTATGTGTGTGTGTACACATaGGGCAAAGAGGAAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: PAIHLTHLQIISSFCTNYVCVYT*GKEEGE Trigger: TTCACCTTCCTCTTTGCCTCATGTGTACACACACAC...ATAATTGGTGCAGAAAGAAGAAATGATCTGAAGATGTGTTAAATGGATTGCAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | GGCCACAAGGGGCAGTGTGGCCGAGGGGAAGGCACTTaGCCTTTCCTGGCTAAGCAGACCACCCTGGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GHKGQCGRGEGT*PFLAKQTTLAF Trigger: GAAGGCCAGGGTGGTCTGCTTAGCCAGGAAAGGGCAAGTGCCTTCCCCTCGGCCACACTGCCCCTTGTGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | GCATCTGTCGAGGAGCGCCCCCTGCAGGACAAGCCCTaGAGCGTTCCTCGGACTCTGCTCTGGTGGAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ASVEERPLQDKP*SVPRTLLWWKV Trigger: AACCTTCCACCAGAGCAGAGTCCGAGGAACGCTGCAGGGCTTGTCCTGCAGGGGGCGCTCCTCGACAGATGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR GCA 72 bp | CGAAGAGGGAAGAGTTTACCGTCAGGTTTGAGCACCTaGCCGGAGTGTGGGGTCTGCCCCCGAAGAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RRGKSLPSGLST*PECGVCPRRGR Trigger: CCTCCCTCTTCGGGGGCAGACCCCACACTCCGGGCAGGTGCTCAAACCTGACGGTAAACTCTTCCCTCTTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | AAGTCCTGGCCAAGGGGGCTCAGCTCGGGGCAATGCTaGCAGGCTAGGCAGCTCCTCTTTGGCTTAGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KSWPRGLSSGQC*QARQLLFGLVS Trigger: GGAGACTAAGCCAAAGAGGAGCTGCCTAGCCTGGCAGCATTGCCCCGAGCTGAGCCCCCTTGGCCAGGACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | GTGAAGTCCTGGCCAAGGGGGCTCAGCTCGGGGCAATaGTGCCAGGCTAGGCAGCTCCTCTTTGGCTTAGTC | + |
|
Preference number: 3 (lower is better) Translates to: VKSWPRGLSSGQ*CQARQLLFGLV Trigger: GACTAAGCCAAAGAGGAGCTGCCTAGCCTGGCAGCATTGCCCCGAGCTGAGCCCCCTTGGCCAGGACTTCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | GAGGGTGAAGCTCACTCTTCCCTGGCCTCACGTTCCTaGCTCAGCTTGGGAAAGCCCTGCAGTCCTTGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: EGEAHSSLASRS*LSLGKPCSPWG Trigger: CCCCCAAGGACTGCAGGGCTTTCCCAAGCTGAGGCAGGAACGTGAGGCCAGGGAAGAGTGAGCTTCACCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | CCCTGCAGGACAAGCCCTGCAGCGTTCCTCGGACTCTaGTCTGGTGGAAGGTTTCTCTCTAGGGCTCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PCRTSPAAFLGL*SGGRFLSRAPC Trigger: GCAGGGAGCCCTAGAGAGAAACCTTCCACCAGAGCAGAGTCCGAGGAACGCTGCAGGGCTTGTCCTGCAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR TCA 72 bp | GGCCCCCTGAGAAGGGAGACAGCAGGGCTCTTTCCATaGCTACAACCTGGACCTCGGGGCCATCACCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: GPLRRETAGLFP*LQPGPRGHHLT Trigger: TGTGAGGTGATGGCCCCGAGGTCCAGGTTGTAGTCATGGAAAGAGCCCTGCTGTCTCCCTTCTCAGGGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | GACACATTAAGGCAGTTTCTCACCACATGCCTGGGATaGTGCGTGCGTGGCCTAGCGCTGAGCCACAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: DTLRQFLTTCLG*CVRGLALSHRP Trigger: GGGCCTGTGGCTCAGCGCTAGGCCACGCACGCAGCATCCCAGGCATGTGGTGAGAAACTGCCTTAATGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | ATTCTGGCAGCCCCAGGACCAGCAGGGACAGCTAGGTaGCCTGGGTCAACAGCCATTCAAGGACTGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: ILAAPGPAGTAR*PGSTAIQGLLC Trigger: GCACAGCAGTCCTTGAATGGCTGTTGACCCAGGGCACCTAGCTGTCCCTGCTGGTCCTGGGGCTGCCAGAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | GCAGTTTCTCACCACATGCCTGGGATGCTGCGTGCGTaGCCTAGCGCTGAGCCACAGGCCCTACTCCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: AVSHHMPGMLRA*PSAEPQALLLS Trigger: ACTAAGGAGTAGGGCCTGTGGCTCAGCGCTAGGCCACGCACGCAGCATCCCAGGCATGTGGTGAGAAACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | CTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTTaGCGCCCAAGGGAATTCTGGCAGCCCCAGGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: LVTEGLATWQVA*RPREFWQPQDQ Trigger: CTGGTCCTGGGGCTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | TCCCAGAGCGGCACCAATCCCACCCTTCGGCTGTCTTaGGGAGAGGTAGGTAGTTCACCCCCTTTCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQSGTNPTLRLS*GEVGSSPPFQG Trigger: TCCCTGGAAAGGGGGTGAACTACCTACCTCTCCTCAAGACAGCCGAAGGGTGGGATTGGTGCCGCTCTGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | CTGGATAAAGGAGCCTCCCTCTGCCGGATCTTGTGTTaGCTCAGGACAAGGCATCTGTCGAGGAGCGCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LDKGASLCRILC*LRTRHLSRSAP Trigger: GGGGGCGCTCCTCGACAGATGCCTTGTCCTGAGTCAACACAAGATCCGGCAGAGGGAGGCTCCTTTATCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR GCA 72 bp | ACATTAAGGCAGTTTCTCACCACATGCCTGGGATGCTaGGTGCGTGGCCTAGCGCTGAGCCACAGGCCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TLRQFLTTCLGC*VRGLALSHRPY Trigger: GTAGGGCCTGTGGCTCAGCGCTAGGCCACGCACGCAGCATCCCAGGCATGTGGTGAGAAACTGCCTTAATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | CTTCATGGGATTGTAGGTGTGAGCCTTGTGAAGTCCTaGCCAAGGGGGCTCAGCTCGGGGCAATGCTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LHGIVGVSLVKS*PRGLSSGQCCQ Trigger: CTGGCAGCATTGCCCCGAGCTGAGCCCCCTTGGCCAGGACTTCACAAGGCTCACACCTACAATCCCATGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | TCCACACCACCAGAAGAGGTCTTGGTGCTCAGGAGGTaGTCTCTGGAGCTGCAGGTCCTTCCGGAAGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: STPPEEVLVLRR*SLELQVLPEGV Trigger: AACGCCTTCCGGAAGGACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | TCTTGGCTGGTTCCACACCACCAGAAGAGGTCTTGGTaGTCAGGAGGTGGTCTCTGGAGCTGCAGGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: SWLVPHHQKRSW*SGGGLWSCRSF Trigger: GAAGGACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | GCCCTTTCCTGGCTAAGCAGACCACCCTGGCCTTCATaGGATTGTAGGTGTGAGCCTTGTGAAGTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALSWLSRPPWPS*DCRCEPCEVLA Trigger: GGCCAGGACTTCACAAGGCTCACACCTACAATCCCATGAAGGCCAGGGTGGTCTGCTTAGCCAGGAAAGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | TCTCACCCAACACAGTCTGCAGAAACCCTTCTGGACTaGAGTCAAAGCTGCTCCCACAGGCAGGGCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SHPTQSAETLLD*SQSCSHRQGSR Trigger: CCTGCTGCCCTGCCTGTGGGAGCAGCTTTGACTCCAGTCCAGAAGGGTTTCTGCAGACTGTGTTGGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | CTGCGTCTCACCCAACACAGTCTGCAGAAACCCTTCTaGACTGGAGTCAAAGCTGCTCCCACAGGCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRLTQHSLQKPF*TGVKAAPTGRA Trigger: TGCCCTGCCTGTGGGAGCAGCTTTGACTCCAGTCCAGAAGGGTTTCTGCAGACTGTGTTGGGTGAGACGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | CAGCTTCCCAGGCATTTCCATGAGGACTCTGTCCAGTaGGCTGGGGTTGCCCACCAGACGAGCTTCATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLPRHFHEDSVQ*AGVAHQTSFIS Trigger: GCTTATGAAGCTCGTCTGGTGGGCAACCCCAGCCCACTGGACAGAGTCCTCATGGAAATGCCTGGGAAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | ATCTCTTGGCTGGTTCCACACCACCAGAAGAGGTCTTaGTGCTCAGGAGGTGGTCTCTGGAGCTGCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ISWLVPHHQKRS*CSGGGLWSCRS Trigger: GGACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAGAGAT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGCTCTTTCCATGACTACAACCTGGACCTCGGGGCCATCACCTCACACTCATGCAAAGCAAGTCCCTaGCAAACGGCTTCAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: QGSFHDYNLDLGAITSHSCKASP*QTASAL Trigger: CAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGCA...TGAGTGTGAGGTGATGGCCCCGAGGTCCAGGTTGTAGTCATGGAAAGAGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | TGCCCTCCAAACCCTCTCTCAAAGCCGATCAGGCAATaGACCAGAGGGCTCTTTACCCCTCGGCTGCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: CPPNPLSKPIRQ*TRGLFTPRLHF Trigger: GAAGTGCAGCCGAGGGGTAAAGAGCCCTCTGGTTCATTGCCTGATCGGCTTTGAGAGAGGGTTTGGAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | AACAGAGGAGACACATTAAGGCAGTTTCTCACCACATaGCTGGGATGCTGCGTGCGTGGCCTAGCGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NRGDTLRQFLTT*LGCCVRGLALS Trigger: GCTCAGCGCTAGGCCACGCACGCAGCATCCCAGGCATGTGGTGAGAAACTGCCTTAATGTGTCTCCTCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | CACCAGAAGAGGTCTTGGTGCTCAGGAGGTGGTCTCTaGAGCTGCAGGTCCTTCCGGAAGGCGTTTATGCTA | + |
|
Preference number: 3 (lower is better) Translates to: HQKRSWCSGGGL*SCRSFRKAFML Trigger: TAGCATAAACGCCTTCCGGAAGGACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | AAGGGAGACAGCAGGGCTCTTTCCATGACTACAACCTaGACCTCGGGGCCATCACCTCACACTCAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: KGDSRALSMTTT*TSGPSPHTQPL Trigger: CAAAGGCTGAGTGTGAGGTGATGGCCCCGAGGTCCAGGTTGTAGTCATGGAAAGAGCCCTGCTGTCTCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | CAGATGCAAAGGCTTGTAACAGAGGGACTGGCTACCTaGCAGGTTGCTTGGCGCCCAAGGGAATTCTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QMQRLVTEGLAT*QVAWRPREFWQ Trigger: CTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTTTGCATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | AGCCCGTCGAGGTTGGCAACTTTGCTGAGTGGGTTTTaGGAACTTGGCGAGGGTAGAAGTCTGCTGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SPSRLATLLSGF*ELGEGRSLLGE Trigger: TTCCCCCAGCAGACTTCTACCCTCGCCAAGTTCCCAAAACCCACTCAGCAAAGTTGCCAACCTCGACGGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | GGGTGGGAACACCCAGTTCCTATTCAGAAGAATGGGTaGGCCTCCTGCCTCAGCTCAAAGGACAAACCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GWEHPVPIQKNG*ASCLSSKDKPG Trigger: CCCAGGTTTGTCCTTTGAGCTGAGGCAGGAGGCTCACCCATTCTTCTGAATAGGAACTGGGTGTTCCCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | GAGGTAGGTAGTTCACCCCCTTTCCAGGGAAATGCCTaGCCATCAGGGCCCAAAGCCGATGCTCTTAGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: EVGSSPPFQGNA*PSGPKADALSD Trigger: ATCACTAAGAGCATCGGCTTTGGGCCCTGATGGGCAGGCATTTCCCTGGAAAGGGGGTGAACTACCTACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACTGTCCTCGGGAGCCAGCAGCAGTGTATAAACACAGGGTACAAATCTGGGCCTCAGTTTGGCCTTaGGTTTCTAGGGGCCAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SHCPREPAAVYKHRVQIWASVWP*VSRGQQ Trigger: CTGTTGGCCCCTAGAAACCAAAGGCCAAACTGAGGC...CCAGATTTGTACCCTGTGTTTATACACTGCTGCTGGCTCCCGAGGACAGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | TGCCACAGGACAAACAGTAGCCCTGGGCTTGAAAGGTaGCCACCAATAGTCCAGCCTGCTATCCTCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: CHRTNSSPGLER*PPIVQPAILRS Trigger: AGATCTGAGGATAGCAGGCTGGACTATTGGTGGGCACCTTTCAAGCCCAGGGCTACTGTTTGTCCTGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | TGGTTGGGAGGCAGAGTCCATGGGCATTTCAGAAAGTaGTCTTCCAACTCAGGGCAGCCTCAGTTTGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: WLGGRVHGHFRK*SSNSGQPQFGL Trigger: AAGGCCAAACTGAGGCTGCCCTGAGTTGGAAGACCACTTTCTGAAATGCCCATGGACTCTGCCTCCCAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | GAGATAATCACCCATGAGAGGATAAACAGAACCCACTaGAGAGGCCCGAAAGGCCTCAGGCCAAGTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EIITHERINRTH*RGPKGLRPSPS Trigger: TGAGGGACTTGGCCTGAGGCCTTTCGGGCCTCTCCAGTGGGTTCTGTTTATCCTCTCATGGGTGATTATCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTTACCCCTCGGCTGCACTTCCTTGCTAAAGTCCCACTGTCCTCGGGAGCCAGATGGAAGGCTGTATTaGTTTCCTCCCAAGCAACAC | + |
|
Preference number: 3 (lower is better) Translates to: SLPLGCTSLLKSHCPREPDGRLY*FPPKQH Trigger: GTGTTGCTTGGGAGGAAACAAATACAGCCTTCCATC...TGGCTCCCGAGGACAGTGGGACTTTAGCAAGGAAGTGCAGCCGAGGGGTAAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | GGGACCAAAAGTGGGGAAGGACAGACTAAGAGTCCCTaGAGCTGCTGGTCCTTCAGAAAGTTCCAGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: GTKSGEGQTKSP*SCWSFRKFQST Trigger: TGTGCTCTGGAACTTTCTGAAGGACCAGCAGCTTCAGGGACTCTTAGTCTGTCCTTCCCCACTTTTGGTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 72 bp | AAGCAGAGAAGATGGGTGAACATGTCAAGCACAGGGTaGGGCAGACACACACTGGCACAGATGGCATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: KQRRWVNMSSTG*GRHTLAQMAWY Trigger: GTACCATGCCATCTGTGCCAGTGTGTGTCTGCCTCACCCTGTGCTTGACATGTTCACCCATCTTCTCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 72 bp | GCAAGCAGAGAGCAGGAACGGCTAGGAAAGGGTCTCTaGGCACAGCTTCAGGGATCACTTCTAAAGGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ASREQERLGKGL*AQLQGSLLKEA Trigger: AGCTTCCTTTAGAAGTGATCCCTGAAGCTGTGCTCAGAGACCCTTTCCTAGCCGTTCCTGCTCTCTGCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CCA 72 bp | CAGAAAGTGGTCTTCCAACTCAGGGCAGCCTCAGTTTaGCCTTTGGTTTCTAGGGGCCAACAGTTCTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: QKVVFQLRAASV*PLVSRGQQFFP Trigger: TGGGAAGAACTGTTGGCCCCTAGAAACCAAAGGCCAAACTGAGGCTGCCCTGAGTTGGAAGACCACTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | AGGAGTGAGAGACGAATGGTTGGGAGGCAGAGTCCATaGGCATTTCAGAAAGTGGTCTTCCAACTCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSERRMVGRQSP*AFQKVVFQLRA Trigger: TGCCCTGAGTTGGAAGACCACTTTCTGAAATGCCCATGGACTCTGCCTCCCAACCATTCGTCTCTCACTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | ACTTCTAAAGGAAGCTTCCCGACCCTGGCACTGAACTaGATAAAGGAGCCTCCCTCTGCCGGATCTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: TSKGSFPTLALN*IKEPPSAGSCV Trigger: AACACAAGATCCGGCAGAGGGAGGCTCCTTTATCCAGTTCAGTGCCAGGGTCGGGAAGCTTCCTTTAGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACAGACAAGACATCGATCATGAGTGAGAAGGACATGAACAGGGGGTTGAAGGAAGGCTGCAGGTATTaGGAAAAGCTGCGGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CTDKTSIMSEKDMNRGLKEGCRY*EKLRVG Trigger: GCCCACCCGCAGCTTTTCCAAATACCTGCAGCCTTC...CTTCAACCCCCTGTTCATGTCCTTCTCACTCATGATCGATGTCTTGTCTGTGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CAA 90 bp | ACTGAGATAATCACCCATGAGAGGATAAACAGAACCCACTGGAGAGGCCCGAAACCACCAGAAGAGGTCTaGGTGCTCAGGAGGTGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TEIITHERINRTHWRGPKPPEEV*VLRRWS Trigger: AGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGG...TTTCGGGCCTCTCCAGTGGGTTCTGTTTATCCTCTCATGGGTGATTATCTCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CAA 90 bp | CCTCAGGCCAAGTCCCTCAGAGGAATGCAGCCCCTTGCCCTCCAAACCCTCTCTATTGGCTTTTCCTTCTaGCTGTCCCATTTGAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: PQAKSLRGMQPLALQTLSIGFSF*LSHLNK Trigger: TTTATTCAAATGGGACAGCAAGAAGGAAAAGCCAAT...AGAGAGGGTTTGGAGGGCAAGGGGCTGCATTCCTCTGAGGGACTTGGCCTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | GTGAAAGTACAGCAAAACTGTGCAAAGCAAGTCCCTTaGAAACGGCTTCAGCCCTGCTCAGGAGCAGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: VKVQQNCAKQVP*KRLQPCSGAEE Trigger: TTCCTCTGCTCCTGAGCAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGCACAGTTTTGCTGTACTTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | CAGCTAGGTGCCCTGGGTCAACAGCCATTCAAGGACTaGTGTGCTTGTATTTTGAAAGCAAGAGAATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QLGALGQQPFKD*CACILKAREWG Trigger: CCCCCATTCTCTTGCTTTCAAAATACAAGCACAGCAGTCCTTGAATGGCTGTTGACCCAGGGCACCTAGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | ACCTTAAAATGGGCCAGGGTAGCTGTTTGGAGAGAATaGATCCCTGGCTCTCATCCAGCTGAAAAGGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLKWARVAVWRE*IPGSHPAEKGA Trigger: TGCACCCTTTTCAGCTGGATGAGAGCCAGGGATGCATTCTCTCCAAACAGCTACCCTGGCCCATTTTAAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGACCTGTTACTCCTCAACAGAAGAATGCATTTGGTTCCAGGAAGGTAAAATCCAGTGGGCTGGGGTaGCCCACCAGACGAGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LRPVTPQQKNAFGSRKVKSSGLG*PTRRAS Trigger: TGAAGCTCGTCTGGTGGGCAACCCCAGCCCACTGGA...TTTTACCTTCCTGGAACCAAATGCATTCTTCTGTTGAGGAGTAACAGGTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 72 bp | TTCTATTCCAGGGTTGAAAATAATTCGCTATCCTCCTaGGGATCCAGCTCTGCAGCTAGCCCTGTGCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FYSRVENNSLSS*GSSSAASPVLL Trigger: GAGGAGCACAGGGCTAGCTGCAGAGCTGGATCCTCAGGAGGATAGCGAATTATTTTCAACCCTGGAATAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | GCAGCTCCTCTTTGGCTTAGTCTCCACCCCAGTCTCTaGACATCTTTCTTCATAGCTTTAGCAGACAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AAPLWLSLHPSL*TSFFIALADRA Trigger: TGCTCTGTCTGCTAAAGCTATGAAGAAAGATGTGCAGAGACTGGGGTGGAGACTAAGCCAAAGAGGAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | CATTGTGCACGGGCGAGGGCAGGGATGAATATAAGCTaGAATATCGTACCATATGCTATGGCGGAGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HCARARAGMNIS*NIVPYAMAECL Trigger: AAGACACTCCGCCATAGCATATGGTACGATATTGCAGCTTATATTCATCCCTGCCCTCGCCCGTGCACAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR TCA 72 bp | TCGCAGGAGCACATCCTACTTCAACCCATCCTTAGATaGAATCAGCTTCCCAGGCATTTCCATGAGGACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SQEHILLQPILR*NQLPRHFHEDS Trigger: AGAGTCCTCATGGAAATGCCTGGGAAGCTGATTTCATCTAAGGATGGGTTGAAGTAGGATGTGCTCCTGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | GTATTTGTTTCCTCCCAAGCAACACCCTTCAAAGCTTaGATTAGATGCAAAGTGGCTGGTGCACAGCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VFVSSQATPFKA*IRCKVAGAQQA Trigger: GGCTTGCTGTGCACCAGCCACTTTGCATCTAATCCAAGCTTTGAAGGGTGTTGCTTGGGAGGAAACAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCCCCTGCAATCCATTTAACACATCTTCAGATCATTTCTTCTTTCTGCACCACCATCCCAGGGATGTaGGGACCAAAAGTGGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PSPAIHLTHLQIISSFCTTIPGM*GPKVGK Trigger: CTTCCCCACTTTTGGTCCCAACATCCCTGGGATGGT...GGTGCAGAAAGAAGAAATGATCTGAAGATGTGTTAAATGGATTGCAGGGGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAGTCCCACTGTCCTCGGGAGCCAGCAGCAGTGTATAAACACAGGGTACAAACTAAAATCAGAGCCTaGCCTTCTAATTCAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: LKSHCPREPAAVYKHRVQTKIRA*PSNSNW Trigger: CCAGTTTGAATTAGAAGGCAAGGCTCTGATTTTAGT...TTGTACCCTGTGTTTATACACTGCTGCTGGCTCCCGAGGACAGTGGGACTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CAA 90 bp | TACCAAAAACCACCAGGGCCGTCTGTGATCATAAGAATGTATGCAAGTTTTATCCCTTCCATTGCAGCATaGGTCCGTCAGGCTACAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YQKPPGPSVIIRMYASFIPSIAA*VRQATE Trigger: CTCTGTAGCCTGACGGACCAATGCTGCAATGGAAGG...GATAAAACTTGCATACATTCTTATGATCACAGACGGCCCTGGTGGTTTTTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR TCA 72 bp | GGATTTGCTTTAAGCAGGCTGTCTCCATCTAGAAACTaGCTGTCAGCGGAGGAATTGATACACAAATCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: GFALSRLSPSRN*LSAEELIHKSG Trigger: GCCGGATTTGTGTATCAATTCCTCCGCTGACAGTCAGTTTCTAGATGGAGACAGCCTGCTTAAAGCAAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | AAGCAGCTGACATGTGTTCTGAGATTTCATCCTTTCTaGGTCTCACCCAACACAGTCTGCAGAAACCCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: KQLTCVLRFHPF*VSPNTVCRNPS Trigger: AGAAGGGTTTCTGCAGACTGTGTTGGGTGAGACGCAGAAAGGATGAAATCTCAGAACACATGTCAGCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR CCA 72 bp | AAAGGATTTCATCTCGAGAGTCCTTTTTCAGGGTCATaGAGACAGTCTTGCGGACACATGGCGATGAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: KGFHLESPFSGS*RQSCGHMAMNG Trigger: TCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAAGGACTCTCGAGATGAAATCCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | AAGCAACACCCTTCAAAGCTTGGATTAGATGCAAAGTaGCTGGTGCACAGCAAGCCAGTGTGTGGTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: KQHPSKLGLDAK*LVHSKPVCGFY Trigger: ATAGAAACCACACACTGGCTTGCTGTGCACCAGCCACTTTGCATCTAATCCAAGCTTTGAAGGGTGTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | CCTCACTGTGAAGGAGACTTTGAAAGGATCCCTAACTaGAGTGAAGATGGAAGGCTGTATTTGTTTCCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PHCEGDFERIPN*SEDGRLYLFPP Trigger: GGGAGGAAACAAATACAGCCTTCCATCTTCACTCCAGTTAGGGATCCTTTCAAAGTCTCCTTCACAGTGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCTTGTCTCCATTTCTGATTGGAACCCAGAATCCCCACTGTGGCTTCATGGCATCTCAGACTTGTGTTTaGTGGGTAAATCTAGGCATG | + |
|
Preference number: 3 (lower is better) Translates to: ILSPFLIGTQNPHCGFMASQTCV*WVNLGM Trigger: CATGCCTAGATTTACCCACAAAACACAAGTCTGAGA...TGCCATGAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGGAGACAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAACACAAAGCAGACTGTATGTCTCCACCCCTTTCCCTATCCAGATGCAAATGCTGTGCTTGTATTTaGAAAGCAAGAGAATGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FQHKADCMSPPLSLSRCKCCACI*KAREWG Trigger: CCCCCATTCTCTTGCTTTCAAAATACAAGCACAGCA...TTTGCATCTGGATAGGGAAAGGGGTGGAGACATACAGTCTGCTTTGTGTTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR GCA 72 bp | GGCAGGGATGAATATAAGCTGCAATATCGTACCATATaGTATGGCGGAGTGTCTTTATGCTGGCAAACCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GRDEYKLQYRTI*YGGVSLCWQTL Trigger: TAAGGTTTGCCAGCATAAAGACACTCCGCCATAGCATATGGTACGATATTGCAGCTTATATTCATCCCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CCA 72 bp | TGGGTAAATCTAGGCATGTTCTCACATTATCCAGGATaGTCTGGCTCCATTCTACAGGAGGCCAAAGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: WVNLGMFSHYPG*SGSILQEAKEK Trigger: TTTTTCTTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGATAATGTGAGAACATGCCTAGATTTACCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAACACAAAGCAGACTGTATGTCTCCACCCCTTTCCCTATCCAGATGCAAAAAAAACAGACAAATATaGCCAGGTGAGGGTAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FQHKADCMSPPLSLSRCKKNRQI*PGEGSG Trigger: TCCACTACCCTCACCTGGCAATATTTGTCTGTTTTT...TTTGCATCTGGATAGGGAAAGGGGTGGAGACATACAGTCTGCTTTGTGTTGAAA 43% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR-3UTR CAA 90 bp | ATATTAAAAATAAGAATAAGAAAGCACACGCTGCATATAGGAAGCTGCCTTCTCTGCAAAGCAAGTCCCTaGCAAACGGCTTCAGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILKIRIRKHTLHIGSCLLCKASP*QTASAL Trigger: CAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGCA...GAGAAGGCAGCTTCCTATATGCAGCGTGTGCTTTCTTATTCTTATTTTTAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCACAGACAAGACATCGATCATGAGTGAGAAGGACATGAACAGGGGGTTGAAGTTCTTGCTGTCCCATTaGAATAAAGGATTTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: CTDKTSIMSEKDMNRGLKFLLSH*NKGFHL Trigger: GAGATGAAATCCTTTATTCAAATGGGACAGCAAGAA...CTTCAACCCCCTGTTCATGTCCTTCTCACTCATGATCGATGTCTTGTCTGTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | CATTCCCATAGCATTCATCAAATAATCACTCTTCCTTaGAATCTCTTGGCTGGTTCCACACCACCAGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSHSIHQIITLP*NLLAGSTPPEE Trigger: CTCTTCTGGTGGTGTGGAACCAGCCAAGAGATTTCAAGGAAGAGTGATTATTTGATGAATGCTATGGGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR GCA 72 bp | AGTTATGGAAATATGGAGGCTCGAGCTAAGCACTGTTaGAAACCACCTTTCTTTGGGCTTTGTGTGTCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SYGNMEARAKHC*KPPFFGLCVSK Trigger: TTTAGACACACAAAGCCCAAAGAAAGGTGGTTTGCAACAGTGCTTAGCTCGAGCCTCCATATTTCCATAACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | AAACCCCACAGTTTTAAGCTAACAGTTATGGAAATATaGAGGCTCGAGCTAAGCACTGTTGCAAACCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: KPHSFKLTVMEI*RLELSTVANHL Trigger: AAGGTGGTTTGCAACAGTGCTTAGCTCGAGCCTCCATATTTCCATAACTGTTAGCTTAAAACTGTGGGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | CTATGGAACATTTTGAAGAATGAGATTACCTTAAAATaGGCCAGGGTAGCTGTTTGGAGAGAATGCATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWNILKNEITLK*ARVAVWRECIP Trigger: AGGGATGCATTCTCTCCAAACAGCTACCCTGGCCCATTTTAAGGTAATCTCATTCTTCAAAATGTTCCATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR TCA 72 bp | ACATCTTCAGATCATTTCTTCTTTCTGCACCAATTATaGAAATTATACCCAGAGGTCTGGGGTACAAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: TSSDHFFFLHQL*KLYPEVWGTRC Trigger: ACATCTTGTACCCCAGACCTCTGGGTATAATTTTCATAATTGGTGCAGAAAGAAGAAATGATCTGAAGATGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| 3UTR TCA 72 bp | AATTCTACAGAGTATTCACTCTCAAACACCTGTTTTTaGAGACTATCTTTCTGTAGCTTACTTCCCCGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NSTEYSLSNTCF*RLSFCSLLPRL Trigger: AAGACGGGGAAGTAAGCTACAGAAAGATAGTCTTCAAAAACAGGTGTTTGAGAGTGAATACTCTGTAGAATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CCA 72 bp | CTTCCGTTTATGATTAATTCTCAGACTTGTGTTTTGTaGGTAAATCTAGGCATGTTCTCACATTATCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPFMINSQTCVL*VNLGMFSHYPG Trigger: TCCTGGATAATGTGAGAACATGCCTAGATTTACCCACAAAACACAAGTCTGAGAATTAATCATAAACGGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR TCA 72 bp | TACAATTTCATTCCAAGTGGAAAAATACACCGTGGCTaGCACCGGAAAGCTACAATACATTTATATGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: YNFIPSGKIHRG*HRKATIHLYVI Trigger: TATGACATATAAATGTATTGTAGCTTTCCGGTGTCAGCCACGGTGTATTTTTCCACTTGGAATGAAATTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CAA 72 bp | GCTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTaGGCGCCCAAGGGAATTCTGGCAGCCCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ACNRGTGYLAGC*APKGILAAPGP Trigger: TGGTCCTGGGGCTGCCAGAATTCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | GGCCTCAGGCCAAGTCCCTCAGAGGAATGCAGCCCCTaGCCCTCCAAACCCTCTCTCAAAGCCGATCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRPSPSEECSP*PSKPSLKADQA Trigger: TGCCTGATCGGCTTTGAGAGAGGGTTTGGAGGGCAAGGGGCTGCATTCCTCTGAGGGACTTGGCCTGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CCA 90 bp | GAGGATCCAGCTCTGCAGCTAGCCCTGTGCTCCTCATCGCAACCTGCTCAACAGTTGGCTCTGGCGATGTaGCTCTCGAAGAACCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EDPALQLALCSSSQPAQQLALAM*LSKNRQ Trigger: CTGCCGGTTCTTCGAGAGCCACATCGCCAGAGCCAA...CTGTTGAGCAGGTTGCGATGAGGAGCACAGGGCTAGCTGCAGAGCTGGATCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | AATCTCTTGGCTGGTTCCACACCACCAGAAGAGGTCTaGGTGCTCAGGAGGTGGTCTCTGGAGCTGCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NLLAGSTPPEEV*VLRRWSLELQV Trigger: GACCTGCAGCTCCAGAGACCACCTCCTGAGCACCAAGACCTCTTCTGGTGGTGTGGAACCAGCCAAGAGATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTTGGCGCCCAAGGGAGGATTTTCAGATGCTTaGCGTTGGCTCTGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KACNRGTGYLAGCLAPKGGFSDA*RWLWRC Trigger: ACATCGCCAGAGCCAACGTCAAGCATCTGAAAATCC...TCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAAACAGAACCCACTGGAGAGGCCCGAAAGGCCTCAGGCCAAGTCCCTCAAGCCGTGCAACAATCTaGAGGGCACAGTTTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RINRTHWRGPKGLRPSPSSRATI*RAQFGV Trigger: CACTCCAAACTGTGCCCTTCAGATTGTTGCACGGCT...TGAGGGACTTGGCCTGAGGCCTTTCGGGCCTCTCCAGTGGGTTCTGTTTATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | GTGGTCTTCCAACTCAGGGCAGCCTCAGTTTGGCCTTaGGTTTCTAGGGGCCAACAGTTCTTCCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVFQLRAASVWP*VSRGQQFFPVS Trigger: GGACACTGGGAAGAACTGTTGGCCCCTAGAAACCAAAGGCCAAACTGAGGCTGCCCTGAGTTGGAAGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGGTAGTTCACCCCCTTTCCAGGGAAATGCCTGCCCATCAGGGCCCAAAGGATTTTCAGATGCTTaGCGTTGGCTCTGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: EVGSSPPFQGNACPSGPKGFSDA*RWLWRC Trigger: ACATCGCCAGAGCCAACGTCAAGCATCTGAAAATCC...TTTGGGCCCTGATGGGCAGGCATTTCCCTGGAAAGGGGGTGAACTACCTACCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CCA 90 bp | GCAACACCCTTCAAAGCTTGGATTAGATGCAAAGTGGCTGGTGCACAGCAAGCCTTGGCTCTGGCGATGTaGCTCTCGAAGAACCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATPFKAWIRCKVAGAQQALALAM*LSKNRQ Trigger: CTGCCGGTTCTTCGAGAGCCACATCGCCAGAGCCAA...GGCTTGCTGTGCACCAGCCACTTTGCATCTAATCCAAGCTTTGAAGGGTGTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR TCA 90 bp | CTGGTGGAAGGTTTCTCTCTAGGGCTCCCTGCAAAGCCACCGTCTATAACTGTGAGCCGTGCAACAATCTaGAGGGCACAGTTTGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LVEGFSLGLPAKPPSITVSRATI*RAQFGV Trigger: CACTCCAAACTGTGCCCTTCAGATTGTTGCACGGCT...CACAGTTATAGACGGTGGCTTTGCAGGGAGCCCTAGAGAGAAACCTTCCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CCA 90 bp | ATCTTGTCTCCATTTCTGATTGGAACCCAGAATCCCCACTGTGGCTTCATGGCATTGGCTCTGGCGATGTaGCTCTCGAAGAACCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSPFLIGTQNPHCGFMALALAM*LSKNRQ Trigger: CTGCCGGTTCTTCGAGAGCCACATCGCCAGAGCCAA...TGCCATGAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGGAGACAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR GCA 90 bp | TCCCACTGTCCTCGGGAGCCAGCAGCAGTGTATAAACACAGGGTACAAATCTGGTTGAGGATTTTCAGATaGTTGACGTTGGCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SHCPREPAAVYKHRVQIWLRIFR*LTLALA Trigger: CGCCAGAGCCAACGTCAAGCATCTGAAAATCCTCAA...CCAGATTTGTACCCTGTGTTTATACACTGCTGCTGGCTCCCGAGGACAGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | TGTGAAAGTACAGCAAAACTGTGCAAAGCAAGTCCCTaGCAAACGGCTTCAGCCCTGCTCAGGAGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CESTAKLCKASP*QTASALLRSRG Trigger: TCCTCTGCTCCTGAGCAGGGCTGAAGCCGTTTGCAAGGGACTTGCTTTGCACAGTTTTGCTGTACTTTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | TCTCGAGAGTCCTTTTTCAGGGTCATGGAGACAGTCTaGCGGACACATGGCGATGAATGGATGGATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SRESFFRVMETV*RTHGDEWMDGW Trigger: CCATCCATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAAGGACTCTCGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR TCA 90 bp | GATGGTCTGGCTCCATTCTACAGGAGGCCAAAGAAAAATCTCACAAAGGGCCCAGGATTTTCAGATGCTTaGCGTTGGCTCTGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DGLAPFYRRPKKNLTKGPGFSDA*RWLWRC Trigger: ACATCGCCAGAGCCAACGTCAAGCATCTGAAAATCC...TGGGCCCTTTGTGAGATTTTTCTTTGGCCTCCTGTAGAATGGAGCCAGACCATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTGTAACAGAGGGACTGGCTACCTGGCAGGTTGCTTGGCGCCCAAGGGATTAATTTCGGGTCAATaGACACTTGTCTGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KACNRGTGYLAGCLAPKGLISGQ*TLVCCC Trigger: ACAACAACAGACAAGTGTGCATTGACCCGAAATTAA...TCCCTTGGGCGCCAAGCAACCTGCCAGGTAGCCAGTCCCTCTGTTACAAGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR GCA 90 bp | GGCATGTTCTCACATTATCCAGGATGGTCTGGCTCCATTCTACAGGAGGCCAAATTGAGGATTTTCAGATaGTTGACGTTGGCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GMFSHYPGWSGSILQEAKLRIFR*LTLALA Trigger: CGCCAGAGCCAACGTCAAGCATCTGAAAATCCTCAA...TTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGATAATGTGAGAACATGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGATAATCACCCATGAGAGGATAAACAGAACCCACTGGAGAGGCCCGAAATTGAGGATTTTCAGATaGTTGACGTTGGCTCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEIITHERINRTHWRGPKLRIFR*LTLALA Trigger: CGCCAGAGCCAACGTCAAGCATCTGAAAATCCTCAA...TTTCGGGCCTCTCCAGTGGGTTCTGTTTATCCTCTCATGGGTGATTATCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR GCA 90 bp | GGTGGAAGGTTTCTCTCTAGGGCTCCCTGCAAAGCCACCGTCTATAACTGTGCCTTAATTTCGGGTCAATaGACACTTGTCTGTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRFLSRAPCKATVYNCALISGQ*TLVCCC Trigger: ACAACAACAGACAAGTGTGCATTGACCCGAAATTAA...GGCACAGTTATAGACGGTGGCTTTGCAGGGAGCCCTAGAGAGAAACCTTCCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CCA 90 bp | GGCATGTTCTCACATTATCCAGGATGGTCTGGCTCCATTCTACAGGAGGCCAAATTCTCCAGGTACTCTTaGATCCACTTTAATTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GMFSHYPGWSGSILQEAKFSRYS*IHFNFG Trigger: CCCGAAATTAAAGTGGATCCAAGAGTACCTGGAGAA...TTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGATAATGTGAGAACATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| 3UTR CAA 72 bp | TGCACAGCAAGCCAGTGTGTGGTTTCTATTCCAGGGTaGAAAATAATTCGCTATCCTCCTGAGGATCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CTASQCVVSIPG*KIIRYPPEDPA Trigger: AGCTGGATCCTCAGGAGGATAGCGAATTATTTTCAACCCTGGAATAGAAACCACACACTGGCTTGCTGTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | AGGATCCCTAACTGGAGTGAAGATGGAAGGCTGTATTaGTTTCCTCCCAAGCAACACCCTTCAAAGCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIPNWSEDGRLY*FPPKQHPSKLG Trigger: TCCAAGCTTTGAAGGGTGTTGCTTGGGAGGAAACAAATACAGCCTTCCATCTTCACTCCAGTTAGGGATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | GGTCAACAGCCATTCAAGGACTGCTGTGCTTGTATTTaGAAAGCAAGAGAATGGGGGATTAAGGTAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GQQPFKDCCACI*KAREWGIKVGR Trigger: TCTCCCTACCTTAATCCCCCATTCTCTTGCTTTCAAAATACAAGCACAGCAGTCCTTGAATGGCTGTTGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | CCGTCTGTGATCATAAGAATGTATGCAAGTTTTATCTaGTCTCCATTTCTGATTGGAACCCAGAATCCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSVIIRMYASFI*SPFLIGTQNPH Trigger: GTGGGGATTCTGGGTTCCAATCAGAAATGGAGACAAGATAAAACTTGCATACATTCTTATGATCACAGACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR GCA 90 bp | CCAGACATTGGCTTTTCCTTCTTGCTGTCCCATTTGAATAAAGGATTTCATCTCCCACTTTTTCTTCTCTaGGCCCCTTGTTTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDIGFSFLLSHLNKGFHLPLFLL*APCLKL Trigger: AAGCTTTAAACAAGGGGCGCAGAGAAGAAAAAGTGG...GAGATGAAATCCTTTATTCAAATGGGACAGCAAGAAGGAAAAGCCAATGTCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCTAACAGTTATGGAAATATGGAGGCTCGAGCTAAGCACTGTTGCAAACTTCTCCAGGTACTCTTaGATCCACTTTAATTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: FKLTVMEIWRLELSTVANFSRYS*IHFNFG Trigger: CCCGAAATTAAAGTGGATCCAAGAGTACCTGGAGAA...GTTTGCAACAGTGCTTAGCTCGAGCCTCCATATTTCCATAACTGTTAGCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| 3UTR CAA 72 bp | ATCACTGATATTCGATCAGAGCCCATAGAGCCACTGTaGAAATATATAGGACTCAGGGACAATTACCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITDIRSEPIEPL*KYIGLRDNYQS Trigger: ACTTTGGTAATTGTCCCTGAGTCCTATATATTTCAACAGTGGCTCTATGGGCTCTGATCGAATATCAGTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | AAACTCCTGGGGCCACGCTTCCCAGAGCGGCACCAATCCCACCCTTCGGCTGTCAGGATTTTCAGATGCTaGACGTTGGCTCTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: KLLGPRFPERHQSHPSAVRIFRC*TLALAM Trigger: CATCGCCAGAGCCAACGTCAAGCATCTGAAAATCCT...GACAGCCGAAGGGTGGGATTGGTGCCGCTCTGGGAAGCGTGGCCCCAGGAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | AAACTCCTGGGGCCACGCTTCCCAGAGCGGCACCAATCCCACCCTTCGGCTGTCATGCACACTTGTCTGTaGTTGTTCTTCAGCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLGPRFPERHQSHPSAVMHTCL*LFFSRA Trigger: TGCACGGCTGAAGAACAACAACAGACAAGTGTGCAT...GACAGCCGAAGGGTGGGATTGGTGCCGCTCTGGGAAGCGTGGCCCCAGGAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGACAGCGTGGGATGAGGGTGAAGCTCACTCTTCCCTGGCCTCACGTTCCTCACACTTGTCTGTTGTaGTTCTTCAGCCGTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GGQRGMRVKLTLPWPHVPHTCLL*FFSRAT Trigger: TGTTGCACGGCTGAAGAACAACAACAGACAAGTGTG...AGGAACGTGAGGCCAGGGAAGAGTGAGCTTCACCCTCATCCCACGCTGTCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAGGTAGTTCACCCCCTTTCCAGGGAAATGCCTGCCCATCAGGGCCCAAACACACTTGTCTGTTGTaGTTCTTCAGCCGTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: EVGSSPPFQGNACPSGPKHTCLL*FFSRAT Trigger: TGTTGCACGGCTGAAGAACAACAACAGACAAGTGTG...TTTGGGCCCTGATGGGCAGGCATTTCCCTGGAAAGGGGGTGAACTACCTACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | CCATTTCTGATTGGAACCCAGAATCCCCACTGTGGCTTCATGGCAAGATTCTGGTTCAGATGCTTGACGTaGGCTCTGGCGATGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PFLIGTQNPHCGFMARFWFRCLT*ALAMWL Trigger: GAGCCACATCGCCAGAGCCAACGTCAAGCATCTGAA...CCAGAATCTTGCCATGAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTCTTTCCATGACTACAACCTGGACCTCGGGGCCATCACCTCACACTCAGCACAGTTTGGAGTGTaGAGGATTTTCAGATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QGSFHDYNLDLGAITSHSAQFGV*RIFRCL Trigger: CAAGCATCTGAAAATCCTCAACACTCCAAACTGTGC...TGAGTGTGAGGTGATGGCCCCGAGGTCCAGGTTGTAGTCATGGAAAGAGCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | CTGGTGGAAGGTTTCTCTCTAGGGCTCCCTGCAAAGCCACCGTCTATAACTGTGCACACTTGTCTGTTGTaGTTCTTCAGCCGTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LVEGFSLGLPAKPPSITVHTCLL*FFSRAT Trigger: TGTTGCACGGCTGAAGAACAACAACAGACAAGTGTG...CACAGTTATAGACGGTGGCTTTGCAGGGAGCCCTAGAGAGAAACCTTCCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCTCCTCTTTGGCTTAGTCTCCACCCCAGTCTCTGCACATCTTTCTTCAATGCACACTTGTCTGTaGTTGTTCTTCAGCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQLLFGLVSTPVSAHLSSMHTCL*LFFSRA Trigger: TGCACGGCTGAAGAACAACAACAGACAAGTGTGCAT...TGAAGAAAGATGTGCAGAGACTGGGGTGGAGACTAAGCCAAAGAGGAGCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS-3UTR CAA 90 bp | CTAAAGTCCCACTGTCCTCGGGAGCCAGCAGCAGTGTATAAACACAGGGTACAACGGGTCAATGCACACTaGTCTGTTGTTGTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LKSHCPREPAAVYKHRVQRVNAH*SVVVLQ Trigger: CTGAAGAACAACAACAGACAAGTGTGCATTGACCCG...TTGTACCCTGTGTTTATACACTGCTGCTGGCTCCCGAGGACAGTGGGACTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | ATCTTGTCTCCATTTCTGATTGGAACCCAGAATCCCCACTGTGGCTTCATGGCAAGGATTTTCAGATGCTaGACGTTGGCTCTGGCGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILSPFLIGTQNPHCGFMARIFRC*TLALAM Trigger: CATCGCCAGAGCCAACGTCAAGCATCTGAAAATCCT...TGCCATGAAGCCACAGTGGGGATTCTGGGTTCCAATCAGAAATGGAGACAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | GGCGAGGGCAGGGATGAATATAAGCTGCAATATCGTACCATATGCTATGGCGGACGGGTCAATGCACACTaGTCTGTTGTTGTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GEGRDEYKLQYRTICYGGRVNAH*SVVVLQ Trigger: CTGAAGAACAACAACAGACAAGTGTGCATTGACCCG...TCCGCCATAGCATATGGTACGATATTGCAGCTTATATTCATCCCTGCCCTCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAGGGTCATGGAGACAGTCTTGCGGACACATGGCGATGAATGGATGGATTCTTCTCTGCGCCCCTaGTTTAAAGCTTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FFRVMETVLRTHGDEWMDSSLRP*FKAFSR Trigger: CCTGGAGAAAGCTTTAAACAAGGGGCGCAGAGAAGA...ATCCATCCATTCATCGCCATGTGTCCGCAAGACTGTCTCCATGACCCTGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS CCA 90 bp | TCTGTTGTTGTTCTTCAGCCGTGCAACAATCTGAAGGGCACAGTTTaGAGTGTTGAGGATTTTCAGATGCTTGACGTTGGCTCTGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SVVVLQPCNNLKGTV*SVEDFQMLDVGSGD Trigger: ATCGCCAGAGCCAACGTCAAGCATCTGAAAATCCTCAACACTCCAAACTGTGCCCTTCAGATTGTTGCACGGCTGAAGAACAACAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073043.5 ENSMUST00000112866.8 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | GACTTTGAAAGGATCCCTAACTGGAGTGAAGATGGAAGGCTGTATTTGTTTCCTTTCAGATGCTTGACGTaGGCTCTGGCGATGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DFERIPNWSEDGRLYLFPFRCLT*ALAMWL Trigger: GAGCCACATCGCCAGAGCCAACGTCAAGCATCTGAA...AGGAAACAAATACAGCCTTCCATCTTCACTCCAGTTAGGGATCCTTTCAAAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | ATCCAGGATGGTCTGGCTCCATTCTACAGGAGGCCAAAGAAAAATCTCACAAAGATGCACACTTGTCTGTaGTTGTTCTTCAGCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IQDGLAPFYRRPKKNLTKMHTCL*LFFSRA Trigger: TGCACGGCTGAAGAACAACAACAGACAAGTGTGCAT...CTTTGTGAGATTTTTCTTTGGCCTCCTGTAGAATGGAGCCAGACCATCCTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | CGGCTCCCTAAAGTTTCTACCCTTCTCTTTTTCCTCACTGTGAAGGAGACTTTGCGGGTCAATGCACACTaGTCTGTTGTTGTTCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RLPKVSTLLFFLTVKETLRVNAH*SVVVLQ Trigger: CTGAAGAACAACAACAGACAAGTGTGCATTGACCCG...CAAAGTCTCCTTCACAGTGAGGAAAAAGAGAAGGGTAGAAACTTTAGGGAGCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | TTTCAACACAAAGCAGACTGTATGTCTCCACCCCTTTCCCTATCCAGATGCAAAGCACAGTTTGGAGTGTaGAGGATTTTCAGATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FQHKADCMSPPLSLSRCKAQFGV*RIFRCL Trigger: CAAGCATCTGAAAATCCTCAACACTCCAAACTGTGC...TTTGCATCTGGATAGGGAAAGGGGTGGAGACATACAGTCTGCTTTGTGTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS GCA 90 bp | AAGCTTTCTCCAGGTACTCTTGGATCCACTTTAATTTCGGGTCAATaGACACTTGTCTGTTGTTGTTCTTCAGCCGTGCAACAATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KLSPGTLGSTLISGQ*TLVCCCSSAVQQSE Trigger: TTCAGATTGTTGCACGGCTGAAGAACAACAACAGACAAGTGTGCATTGACCCGAAATTAAAGTGGATCCAAGAGTACCTGGAGAAAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073043.5 ENSMUST00000112866.8 ENSMUST00000112871.8 |
||
| CDS CCA 90 bp | TTTTCTTCTCTGCGCCCCTTGTTTAAAGCTTTCTCCAGGTACTCTTaGATCCACTTTAATTTCGGGTCAATGCACACTTGTCTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSSLRPLFKAFSRYS*IHFNFGSMHTCLLL Trigger: CAACAACAGACAAGTGTGCATTGACCCGAAATTAAAGTGGATCCAAGAGTACCTGGAGAAAGCTTTAAACAAGGGGCGCAGAGAAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS-3UTR CAA 90 bp | ATATTAAAAATAAGAATAAGAAAGCACACGCTGCATATAGGAAGCTGCCTTCTCTTCAGATGCTTGACGTaGGCTCTGGCGATGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKIRIRKHTLHIGSCLLFRCLT*ALAMWL Trigger: GAGCCACATCGCCAGAGCCAACGTCAAGCATCTGAA...GAGAAGGCAGCTTCCTATATGCAGCGTGTGCTTTCTTATTCTTATTTTTAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000073043.5 ENSMUST00000112871.8 |
||
| CDS-3UTR CAA 90 bp | TACCAAAAACCACCAGGGCCGTCTGTGATCATAAGAATGTATGCAAGTTTTATCGCACAGTTTGGAGTGTaGAGGATTTTCAGATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: YQKPPGPSVIIRMYASFIAQFGV*RIFRCL Trigger: CAAGCATCTGAAAATCCTCAACACTCCAAACTGTGC...GATAAAACTTGCATACATTCTTATGATCACAGACGGCCCTGGTGGTTTTTGGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000112866.8 |
||
| CDS-3UTR CAA 90 bp | CAATTCTACAGAGTATTCACTCTCAAACACCTGTTTTTGAAGACTATCTTTCTGCACATCTTGAGCCTCTaGTTTAAAGCTTTCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QFYRVFTLKHLFLKTIFLHILSL*FKAFSR Trigger: CCTGGAGAAAGCTTTAAACAAGAGGCTCAAGATGTG...CAGAAAGATAGTCTTCAAAAACAGGTGTTTGAGAGTGAATACTCTGTAGAATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112871.8 |
||
| CDS CAA 72 bp | CAGTTTGGAGTGTTGAGGATTTTCAGATGCTTGACGTaGGCTCTGGCGATGTGGCTCTCGAAGAACCGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QFGVLRIFRCLT*ALAMWLSKNRQ Trigger: CTGCCGGTTCTTCGAGAGCCACATCGCCAGAGCCAACGTCAAGCATCTGAAAATCCTCAACACTCCAAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073043.5 ENSMUST00000112866.8 ENSMUST00000112871.8 |
||
| CDS CAA 72 bp | AGGGCACAGTTTGGAGTGTTGAGGATTTTCAGATGCTaGACGTTGGCTCTGGCGATGTGGCTCTCGAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RAQFGVLRIFRC*TLALAMWLSKN Trigger: GTTCTTCGAGAGCCACATCGCCAGAGCCAACGTCAAGCATCTGAAAATCCTCAACACTCCAAACTGTGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073043.5 ENSMUST00000112866.8 ENSMUST00000112871.8 |
||
| CDS CCA 72 bp | GTTCTTCAGCCGTGCAACAATCTGAAGGGCACAGTTTaGAGTGTTGAGGATTTTCAGATGCTTGACGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VLQPCNNLKGTV*SVEDFQMLDVG Trigger: GCCAACGTCAAGCATCTGAAAATCCTCAACACTCCAAACTGTGCCCTTCAGATTGTTGCACGGCTGAAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000073043.5 ENSMUST00000112866.8 ENSMUST00000112871.8 |
||
| CDS GCA 72 bp | CCAGGTACTCTTGGATCCACTTTAATTTCGGGTCAATaGACACTTGTCTGTTGTTGTTCTTCAGCCGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: PGTLGSTLISGQ*TLVCCCSSAVQ Trigger: TTGCACGGCTGAAGAACAACAACAGACAAGTGTGCATTGACCCGAAATTAAAGTGGATCCAAGAGTACCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073043.5 ENSMUST00000112866.8 ENSMUST00000112871.8 |
||
| CDS CCA 72 bp | CTGCGCCCCTTGTTTAAAGCTTTCTCCAGGTACTCTTaGATCCACTTTAATTTCGGGTCAATGCACACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRPLFKAFSRYS*IHFNFGSMHTC Trigger: ACAAGTGTGCATTGACCCGAAATTAAAGTGGATCCAAGAGTACCTGGAGAAAGCTTTAAACAAGGGGCGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073043.5 |
||
| CDS CCA 72 bp | TTGAGCCTCTTGTTTAAAGCTTTCTCCAGGTACTCTTaGATCCACTTTAATTTCGGGTCAATGCACACTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSLLFKAFSRYS*IHFNFGSMHTC Trigger: ACAAGTGTGCATTGACCCGAAATTAAAGTGGATCCAAGAGTACCTGGAGAAAGCTTTAAACAAGAGGCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112871.8 |
||