Pregenerated sensors for CWH43 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029154Ensembl transcript IDs: ENSMUST00000031040.13, ENSMUST00000065543.8
Found 122 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCAACATAGCTTATGAATaGATGGGATTCTCATTGCCG | + |
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Preference number: 3 (lower is better) Translates to: LGPHAHKASPLHRALAPGNIAYE*MGFSLP Trigger: CGGCAATGAGAATCCCATCAATTCATAAGCTATGTT...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGCACCTGTCTCCTTaGGCAGTTGAGCAGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGLHLSP*AVEQTS Trigger: AGAGGTCTGCTCAACTGCTCAAGGAGACAGGTGCAG...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCATTAGGATCTGGCCCTaGGTGGGGATGACCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGIRIWP*VGMTTD Trigger: GTCAGTGGTCATCCCCACCCAGGGCCAGATCCTAAT...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCTGTCATGGTTATGGCTaGTGCGATCTCGCCCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGCHGYG*CDLALW Trigger: CCAGAGGGCGAGATCGCACCAGCCATAACCATGACA...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTAGGCCCTGGGTGGGGATaGCCACTGACTGCCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLGPGWG*PLTAHL Trigger: CAGATGGGCAGTCAGTGGTCATCCCCACCCAGGGCC...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTGGCCCTGGGTGGGGATaGCCACTGACTGCCCATCTG | + |
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Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFGPGWG*PLTAHL Trigger: CAGATGGGCAGTCAGTGGTCATCCCCACCCAGGGCC...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCCATCTGTCTCCATCTaGGCTGTCAATATCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGPSVSI*AVNILH Trigger: GTGAAGGATATTGACAGCTCAGATGGAGACAGATGG...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCAGACCTCTCTAGATTaGGCCAGCCTTCATTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGQTSLD*ASLHCH Trigger: ATGACAATGAAGGCTGGCCCAATCTAGAGAGGTCTG...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAATTTGGCCATCTaGATCTCAGAGTCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGLNLAI*ISESLS Trigger: ACTGAGTGACTCTGAGATTCAGATGGCCAAATTCAG...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCAGCCAAATCTGGGGTTaGAGTGAATGTTCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGSQIWG*SECSWE Trigger: TTCCCAAGAACATTCACTTCAACCCCAGATTTGGCT...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCTGCATGAGAGATTCTTaGATAGCCCAACCTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGCMRDS*IAQPDQ Trigger: CTGATCAGGTTGGGCTATGCAAGAATCTCTCATGCA...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTATAATCCCCCAGGTGTaGTCCCTGGTGCTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFIIPQV*SLVLGP Trigger: TGGGCCAAGCACCAGGGATCACACCTGGGGGATTAT...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCATGGTTATGGCTGGTaGGATCTCGCCCTCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFHGYGW*DLALWR Trigger: TCGCCAGAGGGCGAGATCGCACCAGCCATAACCATG...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTTGCGATCTCGCCCTCTaGCGACGGAAGAAGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFCDLAL*RRKKVM Trigger: CATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCA...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCTCCTCGGTGGTCTATaGCGACTTTCTGGTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFLLGGL*RLSGCL Trigger: GAGACAACCAGAAAGTCGTCATAGACCACCGAGGAG...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCTCAGAATTACTCTGTTaGACATCTGATAGCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGPHAHKASPLHRALAPGSELLC*TSDSSK Trigger: TTTGGAGCTATCAGATGTCCAACAGAGTAATTCTGA...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTAAAAAGGATTAGGATCTaGCCCTGGGTGGGGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLKRIRI*PWVGMT Trigger: GGTCATCCCCACCCAGGGCCAGATCCTAATCCTTTT...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTAAAGGATCATGCCAGTaGCCATGGCTTCTCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFKGSCQ*PWLLRS Trigger: ACTCCGGAGAAGCCATGGCCACTGGCATGATCCTTT...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS-3UTR TCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATTGCAATCCACTTCCTaGCCACCAGGTCACAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLLQSTS*PPGHSL Trigger: CAAACTGTGACCTGGTGGTCAGGAAGTGGATTGCAA...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAATAATCCCCCAGGTGTaGTCCCTGGTGCTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILIIPQV*SLVLGP Trigger: TGGGCCAAGCACCAGGGATCACACCTGGGGGATTAT...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGGGTCTCCAGGGCAATTaGTCTCCACAGGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LHRALAPGLSLIFLYYHTGLQGN*SPQAWH Trigger: ATGCCAGGCCTGTGGAGAGCAATTGCCCTGGAGACC...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACACCCATGGCCGAAGCTaGTCCTGTCATCCACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHTHGRS*SCHPPG Trigger: GCCTGGTGGATGACAGGAGCAGCTTCGGCCATGGGT...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS-3UTR GCA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGCATGGTTATGGCTGGTaGGATCTCGCCCTCTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LHRALAPGLSLIFLYYHTHGYGW*DLALWR Trigger: TCGCCAGAGGGCGAGATCGCACCAGCCATAACCATG...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTAGTGATCCCTGGTGCTTaGCCCAAAGTCTGTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLVIPGA*PKVCVE Trigger: TTCTACACAGACTTTGGGCCAAGCACCAGGGATCAC...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGGTCTCCAGGGCAATTaGTCTCCACAGGCCTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHGLQGN*SPQAWH Trigger: ATGCCAGGCCTGTGGAGAGCAATTGCCCTGGAGACC...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTTGTAGTCACCATCTGTaGCAATTCGGTCAAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFCSHHL*QFGQAQ Trigger: CTGTGCTTGACCGAATTGGCACAGATGGTGACTACA...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACCCCAGGTGTGATCCCTaGTGCTTGGCCCAAAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHPRCDP*CLAQSL Trigger: CAGACTTTGGGCCAAGCACCAGGGATCACACCTGGG...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCTCCGAAGATCCAGTaGGTTAGGAACAGGAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILSPKIQ*VRNRRL Trigger: GAGCCTCCTGTTCCTAACTCACTGGATCTTCGGAGA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGGTGGGGATGACCACTaGCTGCCCATCTGGAAACAA | + |
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Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHGGDDH*LPIWKQ Trigger: TTGTTTCCAGATGGGCAGTCAGTGGTCATCCCCACC...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACCTGCACCTGTCTCCTTaGGCAGTTGAGCAGACCTCT | + |
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Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHLHLSP*AVEQTS Trigger: AGAGGTCTGCTCAACTGCTCAAGGAGACAGGTGCAG...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGCTCCTCGGTGGTCTATaGCGACTTTCTGGTTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: LHRALAPGLSLIFLYYHTLLGGL*RLSGCL Trigger: GAGACAACCAGAAAGTCGTCATAGACCACCGAGGAG...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAAGGTGTGATCCCTGGTaGTTGGCCCAAAGTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILRCDPW*LAQSLC Trigger: ACACAGACTTTGGGCCAAGCACCAGGGATCACACCT...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACATTAGGATCTGGCCCTaGGTGGGGATGACCACTGAC | + |
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Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHIRIWP*VGMTTD Trigger: GTCAGTGGTCATCCCCACCCAGGGCCAGATCCTAAT...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAAAAAGGATTAGGATCTaGCCCTGGGTGGGGATGACC | + |
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Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILKRIRI*PWVGMT Trigger: GGTCATCCCCACCCAGGGCCAGATCCTAATCCTTTT...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATTGCAATCCACTTCCTaGCCACCAGGTCACAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILLQSTS*PPGHSL Trigger: CAAACTGTGACCTGGTGGTCAGGAAGTGGATTGCAA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTAAACCGGGCTCTGAAGTaGTATAACCCAGAAATATCA | + |
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Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLNRALK*YNPEIS Trigger: TGATATTTCTGGGTTATATCACTTCAGAGCCCGGTT...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCGTTGCCATGTTTTGTaGGTTGTATGTAATCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFRCHVL*VVCNLW Trigger: CCAGAGATTACATACAACTCACAAAACATGGCAACG...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCAGACCCCGGTACATaGTGTACTCACACCATCTGT | + |
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Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILSDPGT*CTHTIC Trigger: ACAGATGGTGTGAGTACATCATGTACCGGGGTCTGA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAAGACCCCGTAAAGACTaGCAGGACACATCCAGAAAC | + |
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Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILRPRKD*QDTSRN Trigger: GTTTCTGGATGTGTCCTGGCAGTCTTTACGGGGTCT...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS-3UTR GCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTAAATGGTGATAAAATCTaGACCTGTCTCCTTGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLNGDKI*TCLLEQ Trigger: CTGCTCAAGGAGACAGGTGCAGATTTTATCACCATT...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CCA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATCGAAGCTTAGCATTTaGAGCCTCAAAGGAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KASPLHRALAPGLSLIFLSKLSI*SLKGSY Trigger: ATAGCTTCCTTTGAGGCTCCAAATGCTAAGCTTCGA...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGCCATCTGTCTCCATCTaGGCTGTCAATATCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LHRALAPGLSLIFLYYHTPSVSI*AVNILH Trigger: GTGAAGGATATTGACAGCTCAGATGGAGACAGATGG...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR TCA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGGATCATCCGGGATCCTaGATTTGGCCATCTGAATCT | + |
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Preference number: 4 (lower is better) Translates to: LHRALAPGLSLIFLYYHTDHPGS*IWPSES Trigger: AGATTCAGATGGCCAAATTCAGGATCCCGGATGATC...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR GCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGGGATGACCACTGACTaGCCATCTGGAAACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHGMTTD*PSGNNG Trigger: TCCATTGTTTCCAGATGGGCAGTCAGTGGTCATCCC...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR GCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTAGAGTCACTCAGTTCTaGATGAGAGATTCTTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFRVTQF*MRDSCI Trigger: TATGCAAGAATCTCTCATGCAGAACTGAGTGACTCT...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGTGATCCCTGGTGCTTaGCCCAAAGTCTGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHVIPGA*PKVCVE Trigger: TTCTACACAGACTTTGGGCCAAGCACCAGGGATCAC...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCAAGGTCATCTTCATaGTTCCCAAAGTGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILSRSSS*FPKCVT Trigger: GGTGACACACTTTGGGAATCATGAAGATGACCTTGA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGTCAAGGTCATCTTCATaGTTCCCAAAGTGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LHRALAPGLSLIFLYYHTSRSSS*FPKCVT Trigger: GGTGACACACTTTGGGAATCATGAAGATGACCTTGA...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGATCATCCGGGATCCTaGATTTGGCCATCTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHDHPGS*IWPSES Trigger: AGATTCAGATGGCCAAATTCAGGATCCCGGATGATC...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAAATCTGGGGTTGAAGTaGATGTTCTTGGGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILNLGLK*MFLGTP Trigger: AGGAGTTCCCAAGAACATTCACTTCAACCCCAGATT...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAAGCCAAATCTGGGGTTaGAGTGAATGTTCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILSQIWG*SECSWE Trigger: TTCCCAAGAACATTCACTTCAACCCCAGATTTGGCT...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATGCATGAGAGATTCTTaGATAGCCCAACCTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILCMRDS*IAQPDQ Trigger: CTGATCAGGTTGGGCTATGCAAGAATCTCTCATGCA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTTCAGAATTACTCTGTTaGACATCTGATAGCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TQGKPFTPSSGSRPELNFSELLC*TSDSSK Trigger: TTTGGAGCTATCAGATGTCCAACAGAGTAATTCTGA...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCGAAGCTTAGCATTTaGAGCCTCAAAGGAAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KPFTPSSGSRPELNFPILSKLSI*SLKGSY Trigger: ATAGCTTCCTTTGAGGCTCCAAATGCTAAGCTTCGA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACTCCCTATATAGGGCTTaGAAGCATCGCTCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHSLYRA*KHRSPK Trigger: TTTTGGAGAGCGATGCTTCCAAGCCCTATATAGGGA...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTCCCAGGTGTGATCCCTaGTGCTTGGCCCAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFPRCDP*CLAQSL Trigger: CAGACTTTGGGCCAAGCACCAGGGATCACACCTGGG...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACAACCGGGCTCTGAAGTaGTATAACCCAGAAATATCA | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHNRALK*YNPEIS Trigger: TGATATTTCTGGGTTATATCACTTCAGAGCCCGGTT...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACCGTTGCCATGTTTTGTaGGTTGTATGTAATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHRCHVL*VVCNLW Trigger: CCAGAGATTACATACAACTCACAAAACATGGCAACG...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR GCA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACATTTTGAGGTACCTTTaGAATCCACTTCCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: FTPSSGSRPELNFPILSHILRYL*NPLPDH Trigger: GTGGTCAGGAAGTGGATTGCAAAGGTACCTCAAAAT...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTTGTCATGGTTATGGCTaGTGCGATCTCGCCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFCHGYG*CDLALW Trigger: CCAGAGGGCGAGATCGCACCAGCCATAACCATGACA...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTTCTCCGAAGATCCAGTaGGTTAGGAACAGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFSPKIQ*VRNRRL Trigger: GAGCCTCCTGTTCCTAACTCACTGGATCTTCGGAGA...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR GCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTAGGTGTGATCCCTGGTaGTTGGCCCAAAGTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFRCDPW*LAQSLC Trigger: ACACAGACTTTGGGCCAAGCACCAGGGATCACACCT...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTTCATGCCAGTGGCCATaGCTTCTCCGGAGTTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFSCQWP*LLRSFS Trigger: GGAAAAACTCCGGAGAAGCCATGGCCACTGGCATGA...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
||
| CDS-3UTR TCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTTCCGGAGTTTTTCCCTaGGTTCACAAGATGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFSGVFP*VHKMAK Trigger: CTTGGCCATCTTGTGAACTCAGGGAAAAACTCCGGA...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
||
| CDS-3UTR TCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTTCAGACCCCGGTACATaGTGTACTCACACCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFSDPGT*CTHTIC Trigger: ACAGATGGTGTGAGTACATCATGTACCGGGGTCTGA...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR GCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTGGGATGACCACTGACTaGCCATCTGGAAACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFGMTTD*PSGNNG Trigger: TCCATTGTTTCCAGATGGGCAGTCAGTGGTCATCCC...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTCCCATCTGGAAACAATaGAGACCTCTCCGAAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFPIWKQ*RPLRRS Trigger: GGATCTTCGGAGAGGTCTCCATTGTTTCCAGATGGG...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTCTGAATTTGGCCATCTaGATCTCAGAGTCACTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFLNLAI*ISESLS Trigger: ACTGAGTGACTCTGAGATTCAGATGGCCAAATTCAG...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR TCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTAATCTGGGGTTGAAGTaGATGTTCTTGGGAACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFNLGLK*MFLGTP Trigger: AGGAGTTCCCAAGAACATTCACTTCAACCCCAGATT...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR GCA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTATTTTGAGGTACCTTTaGAATCCACTTCCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNNIAYELMGFSLPDVTFILRYL*NPLPDH Trigger: GTGGTCAGGAAGTGGATTGCAAAGGTACCTCAAAAT...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| 3UTR CAA 72 bp | AGAGAGATGCCTTTATTAAACAACATAGCTTATGAATaGATGGGATTCTCATTGCCGGATGTCACTTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: REMPLLNNIAYE*MGFSLPDVTFL Trigger: GAGAAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAATAAAGGCATCTCTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS CCA 90 bp | ATCCAGAAACAGCAGCTGCCCATGTGCGCAGGTAGAGGAGACCCATaGCCGAAGCTGCTCCTGTCATCCACCAGGCTAACCCAGCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: IQKQQLPMCAGRGDP*PKLLLSSTRLTQHH Trigger: ATGATGCTGGGTTAGCCTGGTGGATGACAGGAGCAGCTTCGGCCATGGGTCTCCTCTACCTGCGCACATGGGCAGCTGCTGTTTCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
||
| CDS TCA 90 bp | AGAACCGCACCTCCAAAAGGATTAGGATCTGGCCCTGGGTGGGGATaGCCACTGACTGCCCATCTGGAAACAATGGAGACCTCTCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RTAPPKGLGSGPGWG*PLTAHLETMETSPK Trigger: CTTCGGAGAGGTCTCCATTGTTTCCAGATGGGCAGTCAGTGGTCATCCCCACCCAGGGCCAGATCCTAATCCTTTTGGAGGTGCGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS CCA 90 bp | GGAGACGTTAACTGTCATGGTTATGGCTGGTGCGATCTCGCCCTCTaGCGACGGAAGAAGGTGATGTTCCGATCTGACAATCGGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: GDVNCHGYGWCDLAL*RRKKVMFRSDNRVP Trigger: CGGTACCCGATTGTCAGATCGGAACATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCATGACAGTTAACGTCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCTGTGAGCTCCAGCGTTaGCAGGGGAAAATAATAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGPHAHKASPLHRALAPGCELQR*QGKIID Trigger: ATCTATTATTTTCCCCTGCAAACGCTGGAGCTCACA...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS TCA 90 bp | ATGGTTATGGCTGGTGCGATCTCGCCCTCTGGCGACGGAAGAAGGTaGTGTTCCGATCTGACAATCGGGTACCGAGACAGCACCATAATC | + |
|
Preference number: 5 (lower is better) Translates to: MVMAGAISPSGDGRR*CSDLTIGYRDSTII Trigger: GATTATGGTGCTGTCTCGGTACCCGATTGTCAGATCGGAACATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS GCA 90 bp | CACAAGATGGCCAAGTACTTGAGGCCACATAGACCCCGTAAAGACTaGCAGGACACATCCAGAAACAGCAGCTGCCCATGTGCGCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HKMAKYLRPHRPRKD*QDTSRNSSCPCAQV Trigger: TACCTGCGCACATGGGCAGCTGCTGTTTCTGGATGTGTCCTGGCAGTCTTTACGGGGTCTATGTGGCCTCAAGTACTTGGCCATCTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
||
| CDS-3UTR CAA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCTTGGGCCAGCCTTCATaGTCATATCCAAACCTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LGPHAHKASPLHRALAPGLGQPS*SYPNLK Trigger: TTTTAGGTTTGGATATGACAATGAAGGCTGGCCCAA...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGGCCCCATGCACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCGCCATGTTTTGTGAGTaGTATGTAATCTCTGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: LGPHAHKASPLHRALAPGAMFCE*YVISGT Trigger: GGTTCCAGAGATTACATACAACTCACAAAACATGGC...GCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGTGCATGGGGCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS GCA 90 bp | ATCCACCAGTCTGTTGGAGACGTTAACTGTCATGGTTATGGCTGGTaGGATCTCGCCCTCTGGCGACGGAAGAAGGTGATGTTCCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: IHQSVGDVNCHGYGW*DLALWRRKKVMFRS Trigger: AGATCGGAACATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCATGACAGTTAACGTCTCCAACAGACTGGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS GCA 90 bp | CCTCACGGGGCTTCTTCCCCTCAGGGTTTCTGTAGTCACCATCTGTaGCAATTCGGTCAAGCACAGCTACGGCACTCAATGTCAGAATTA | + |
|
Preference number: 5 (lower is better) Translates to: PHGASSPQGFCSHHL*QFGQAQLRHSMSEL Trigger: TAATTCTGACATTGAGTGCCGTAGCTGTGCTTGACCGAATTGGCACAGATGGTGACTACAGAAACCCTGAGGGGAAGAAGCCCCGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS CCA 90 bp | AGAAGACACACCAAGGGCGAGGACCATCAGTCGAAGCTTAGCATTTaGAGCCTCAAAGGAAGCTATGCTGCCTACAGTGACGATCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RRHTKGEDHQSKLSI*SLKGSYAAYSDDPQ Trigger: CTGAGGATCGTCACTGTAGGCAGCATAGCTTCCTTTGAGGCTCCAAATGCTAAGCTTCGACTGATGGTCCTCGCCCTTGGTGTGTCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS CCA 90 bp | AAAATCCACCAGTCTGTTGGAGACGTTAACTGTCATGGTTATGGCTaGTGCGATCTCGCCCTCTGGCGACGGAAGAAGGTGATGTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: KIHQSVGDVNCHGYG*CDLALWRRKKVMFR Trigger: TCGGAACATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCATGACAGTTAACGTCTCCAACAGACTGGTGGATTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATGTGATCCCTGGTGCTaGGCCCAAAGTCTGTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KASPLHRALAPGLSLIFLCDPWC*AQSLCR Trigger: TCTACACAGACTTTGGGCCAAGCACCAGGGATCACA...TAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS TCA 90 bp | ATAAAGGATCATGCCAGTGGCCATGGCTTCTCCGGAGTTTTTCCCTaGGTTCACAAGATGGCCAAGTACTTGAGGCCACATAGACCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: IKDHASGHGFSGVFP*VHKMAKYLRPHRPR Trigger: ACGGGGTCTATGTGGCCTCAAGTACTTGGCCATCTTGTGAACTCAGGGAAAAACTCCGGAGAAGCCATGGCCACTGGCATGATCCTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
||
| CDS GCA 90 bp | TTGAGGTACCTTTGCAATCCACTTCCTGACCACCAGGTCACAGTTTaGACTATCAGGGAAGAAGACACACCAAGGGCGAGGACCATCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRYLCNPLPDHQVTV*TIREEDTPRARTIS Trigger: ACTGATGGTCCTCGCCCTTGGTGTGTCTTCTTCCCTGATAGTGCAAACTGTGACCTGGTGGTCAGGAAGTGGATTGCAAAGGTACCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
||
| CDS GCA 90 bp | CGGGATCCTGAATTTGGCCATCTGAATCTCAGAGTCACTCAGTTCTaGATGAGAGATTCTTGCATAGCCCAACCTGATCAGACCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RDPEFGHLNLRVTQF*MRDSCIAQPDQTPV Trigger: TACCGGGGTCTGATCAGGTTGGGCTATGCAAGAATCTCTCATGCAGAACTGAGTGACTCTGAGATTCAGATGGCCAAATTCAGGATCCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 90 bp | CGACTTTCTGGTTGTCTCTGTAATTGGCGGGATCATCCGGGATCCTaGATTTGGCCATCTGAATCTCAGAGTCACTCAGTTCTGCATGAG | + |
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Preference number: 5 (lower is better) Translates to: RLSGCLCNWRDHPGS*IWPSESQSHSVLHE Trigger: CTCATGCAGAACTGAGTGACTCTGAGATTCAGATGGCCAAATTCAGGATCCCGGATGATCCCGCCAATTACAGAGACAACCAGAAAGTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS GCA 90 bp | GGCCATCTGAATCTCAGAGTCACTCAGTTCTGCATGAGAGATTCTTaGATAGCCCAACCTGATCAGACCCCGGTACATGATGTACTCACA | + |
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Preference number: 5 (lower is better) Translates to: GHLNLRVTQFCMRDS*IAQPDQTPVHDVLT Trigger: TGTGAGTACATCATGTACCGGGGTCTGATCAGGTTGGGCTATGCAAGAATCTCTCATGCAGAACTGAGTGACTCTGAGATTCAGATGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | ACACAAGGCAAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTTGTGAGCTCCAGCGTTaGCAGGGGAAAATAATAGAT | + |
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Preference number: 5 (lower is better) Translates to: TQGKPFTPSSGSRPELNFCELQR*QGKIID Trigger: ATCTATTATTTTCCCCTGCAAACGCTGGAGCTCACA...AAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTTGCCTTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATGTGATCCCTGGTGCTaGGCCCAAAGTCTGTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: KPFTPSSGSRPELNFPILCDPWC*AQSLCR Trigger: TCTACACAGACTTTGGGCCAAGCACCAGGGATCACA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCTCCCCCAGCCACATaGTTAAGTCGTTGTTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: KPFTPSSGSRPELNFPILSPPAT*LSRCSL Trigger: TAGGGAACAACGACTTAACAATGTGGCTGGGGGAGA...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGTCTCCCCCAGCCACATaGTTAAGTCGTTGTTCCCTA | + |
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Preference number: 5 (lower is better) Translates to: LHRALAPGLSLIFLYYHTSPPAT*LSRCSL Trigger: TAGGGAACAACGACTTAACAATGTGGCTGGGGGAGA...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGTCCAGAGTGGGGGAATaGTTAAGAGTATCGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: LHRALAPGLSLIFLYYHTSRVGE*LRVSER Trigger: TCTCTCCGATACTCTTAACAATTCCCCCACTCTGGA...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | TTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACTCCAGAGTGGGGGAATaGTTAAGAGTATCGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: FTPSSGSRPELNFPILSHSRVGE*LRVSER Trigger: TCTCTCCGATACTCTTAACAATTCCCCCACTCTGGA...GTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | TTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTATCACACGTTGGGCCAGCCTTCATaGTCATATCCAAACCTAAAA | + |
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Preference number: 5 (lower is better) Translates to: LHRALAPGLSLIFLYYHTLGQPS*SYPNLK Trigger: TTTTAGGTTTGGATATGACAATGAAGGCTGGCCCAA...CGTGTGATAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | AAGCCCTTTACACCGAGCTCTGGCTCCAGGCCTGAGCTTAATTTTCCTATATTAGCCATGTTTTGTGAGTaGTATGTAATCTCTGGAACC | + |
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Preference number: 5 (lower is better) Translates to: KPFTPSSGSRPELNFPILAMFCE*YVISGT Trigger: GGTTCCAGAGATTACATACAACTCACAAAACATGGC...TAATATAGGAAAATTAAGCTCAGGCCTGGAGCCAGAGCTCGGTGTAAAGGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CCA 90 bp | TTCGGTCAAGCACAGCTACGGCACTCAATGTCAGAATTACTCTGTTaGACATCTGATAGCTCCAAATTGGGTTTAATGATGTGTACCATA | + |
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Preference number: 5 (lower is better) Translates to: FGQAQLRHSMSELLC*TSDSSKLGLMMCTI Trigger: TATGGTACACATCATTAAACCCAATTTGGAGCTATCAGATGTCCAACAGAGTAATTCTGACATTGAGTGCCGTAGCTGTGCTTGACCGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS-3UTR CAA 90 bp | TTAAACAACATAGCTTATGAATTGATGGGATTCTCATTGCCGGATGTCACTTTTTCTGATAGCTCCAAATaGGGTTTAATGATGTGTACC | + |
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Preference number: 5 (lower is better) Translates to: LNNIAYELMGFSLPDVTFSDSSK*GLMMCT Trigger: GGTACACATCATTAAACCCAATTTGGAGCTATCAGA...AAAAGTGACATCCGGCAATGAGAATCCCATCAATTCATAAGCTATGTTGTTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CCA 72 bp | CAGCAGCTGCCCATGTGCGCAGGTAGAGGAGACCCATaGCCGAAGCTGCTCCTGTCATCCACCAGGCTAACC | + |
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Preference number: 6 (lower is better) Translates to: QQLPMCAGRGDP*PKLLLSSTRLT Trigger: GGTTAGCCTGGTGGATGACAGGAGCAGCTTCGGCCATGGGTCTCCTCTACCTGCGCACATGGGCAGCTGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS TCA 72 bp | GCTGGTGCGATCTCGCCCTCTGGCGACGGAAGAAGGTaGTGTTCCGATCTGACAATCGGGTACCGAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: AGAISPSGDGRR*CSDLTIGYRDS Trigger: GCTGTCTCGGTACCCGATTGTCAGATCGGAACATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS GCA 72 bp | CGTAAAGACTGCCAGGACACATCCAGAAACAGCAGCTaGCCATGTGCGCAGGTAGAGGAGACCCATGGCCGA | + |
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Preference number: 6 (lower is better) Translates to: RKDCQDTSRNSS*PCAQVEETHGR Trigger: TCGGCCATGGGTCTCCTCTACCTGCGCACATGGGCAGCTGCTGTTTCTGGATGTGTCCTGGCAGTCTTTACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS TCA 72 bp | CCTCCAAAAGGATTAGGATCTGGCCCTGGGTGGGGATaGCCACTGACTGCCCATCTGGAAACAATGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: PPKGLGSGPGWG*PLTAHLETMET Trigger: GGTCTCCATTGTTTCCAGATGGGCAGTCAGTGGTCATCCCCACCCAGGGCCAGATCCTAATCCTTTTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CCA 72 bp | CAGTCTGTTGGAGACGTTAACTGTCATGGTTATGGCTaGTGCGATCTCGCCCTCTGGCGACGGAAGAAGGTG | + |
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Preference number: 6 (lower is better) Translates to: QSVGDVNCHGYG*CDLALWRRKKV Trigger: CACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCATGACAGTTAACGTCTCCAACAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS GCA 72 bp | TCTGTTGGAGACGTTAACTGTCATGGTTATGGCTGGTaGGATCTCGCCCTCTGGCGACGGAAGAAGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: SVGDVNCHGYGW*DLALWRRKKVM Trigger: CATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCATGACAGTTAACGTCTCCAACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 72 bp | GCTGCTCCTGTCATCCACCAGGCTAACCCAGCATCATaGAGCCATGATGAACCCGATAGCATCAGTCCACTT | + |
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Preference number: 6 (lower is better) Translates to: AAPVIHQANPAS*SHDEPDSISPL Trigger: AAGTGGACTGATGCTATCGGGTTCATCATGGCTTCATGATGCTGGGTTAGCCTGGTGGATGACAGGAGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS TCA 72 bp | CATGCCAGTGGCCATGGCTTCTCCGGAGTTTTTCCCTaGGTTCACAAGATGGCCAAGTACTTGAGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: HASGHGFSGVFP*VHKMAKYLRPH Trigger: ATGTGGCCTCAAGTACTTGGCCATCTTGTGAACTCAGGGAAAAACTCCGGAGAAGCCATGGCCACTGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS CCA 72 bp | ACCAAGGGCGAGGACCATCAGTCGAAGCTTAGCATTTaGAGCCTCAAAGGAAGCTATGCTGCCTACAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: TKGEDHQSKLSI*SLKGSYAAYSD Trigger: GTCACTGTAGGCAGCATAGCTTCCTTTGAGGCTCCAAATGCTAAGCTTCGACTGATGGTCCTCGCCCTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CCA 72 bp | AACTGTCATGGTTATGGCTGGTGCGATCTCGCCCTCTaGCGACGGAAGAAGGTGATGTTCCGATCTGACAAT | + |
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Preference number: 6 (lower is better) Translates to: NCHGYGWCDLAL*RRKKVMFRSDN Trigger: ATTGTCAGATCGGAACATCACCTTCTTCCGTCGCCAGAGGGCGAGATCGCACCAGCCATAACCATGACAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 72 bp | GAGTTTTTCCCTGAGTTCACAAGATGGCCAAGTACTTaGGGCCACATAGACCCCGTAAAGACTGCCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: EFFPEFTRWPST*GHIDPVKTART Trigger: TGTCCTGGCAGTCTTTACGGGGTCTATGTGGCCTCAAGTACTTGGCCATCTTGTGAACTCAGGGAAAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031040.13 |
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| CDS CAA 90 bp | CTGCCTACAGTGACGATCCTCAGCAGAGAGAGTGTCCACTTCTTATaGACGAGTTTCCAGAGTGGGGGAATTGTTAAGAGTATCGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: LPTVTILSRESVHFL*TSFQSGGIVKSIGE Trigger: CTCTCCGATACTCTTAACAATTCCCCCACTCTGGAAACTCGTCAATAAGAAGTGGACACTCTCTCTGCTGAGGATCGTCACTGTAGGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 72 bp | CATTTGGAGCCTCAAAGGAAGCTATGCTGCCTACAGTaGCGATCCTCAGCAGAGAGAGTGTCCACTTCTTAT | + |
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Preference number: 6 (lower is better) Translates to: HLEPQRKLCCLQ*RSSAERVSTSY Trigger: ATAAGAAGTGGACACTCTCTCTGCTGAGGATCGTCACTGTAGGCAGCATAGCTTCCTTTGAGGCTCCAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 72 bp | TCCCCAGATTTTGAGGTACCTTTGCAATCCACTTCCTaGCCACCAGGTCACAGTTTGCACTATCAGGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SPDFEVPLQSTS*PPGHSLHYQGR Trigger: TCTTCCCTGATAGTGCAAACTGTGACCTGGTGGTCAGGAAGTGGATTGCAAAGGTACCTCAAAATCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 72 bp | GGTTGTCTCTGTAATTGGCGGGATCATCCGGGATCCTaGATTTGGCCATCTGAATCTCAGAGTCACTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: GCLCNWRDHPGS*IWPSESQSHSV Trigger: AACTGAGTGACTCTGAGATTCAGATGGCCAAATTCAGGATCCCGGATGATCCCGCCAATTACAGAGACAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS GCA 72 bp | CTTGGAAGCATCGCTCTCCAAAATGGTGATAAAATCTaGACCTGTCTCCTTGAGCAGTTGAGCAGACCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGSIALQNGDKI*TCLLEQLSRPL Trigger: GAGAGGTCTGCTCAACTGCTCAAGGAGACAGGTGCAGATTTTATCACCATTTTGGAGAGCGATGCTTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CAA 72 bp | AGTCTGTGTAGAAACCCAGCTTCTCCCCCAGCCACATaGTTAAGTCGTTGTTCCCTATATAGGGCTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLCRNPASPPAT*LSRCSLYRAWK Trigger: CTTCCAAGCCCTATATAGGGAACAACGACTTAACAATGTGGCTGGGGGAGAAGCTGGGTTTCTACACAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CAA 72 bp | TTCCCAAAGTGTGTCACCACAAAATCCACCAGTCTGTaGGAGACGTTAACTGTCATGGTTATGGCTGGTGCG | + |
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Preference number: 6 (lower is better) Translates to: FPKCVTTKSTSL*ETLTVMVMAGA Trigger: CGCACCAGCCATAACCATGACAGTTAACGTCTCCAACAGACTGGTGGATTTTGTGGTGACACACTTTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS GCA 72 bp | AATCTCAGAGTCACTCAGTTCTGCATGAGAGATTCTTaGATAGCCCAACCTGATCAGACCCCGGTACATGAT | + |
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Preference number: 6 (lower is better) Translates to: NLRVTQFCMRDS*IAQPDQTPVHD Trigger: ATCATGTACCGGGGTCTGATCAGGTTGGGCTATGCAAGAATCTCTCATGCAGAACTGAGTGACTCTGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CAA 72 bp | GTGACGATCCTCAGCAGAGAGAGTGTCCACTTCTTATaGACGAGTTTCCAGAGTGGGGGAATTGTTAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: VTILSRESVHFL*TSFQSGGIVKS Trigger: ACTCTTAACAATTCCCCCACTCTGGAAACTCGTCAATAAGAAGTGGACACTCTCTCTGCTGAGGATCGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS TCA 72 bp | CTGAGCTGTCAATATCCTTCACGTTGCCATGTTTTGTaGGTTGTATGTAATCTCTGGAACCGGGCTCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LSCQYPSRCHVL*VVCNLWNRALK Trigger: CTTCAGAGCCCGGTTCCAGAGATTACATACAACTCACAAAACATGGCAACGTGAAGGATATTGACAGCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS GCA 72 bp | GAATTTGGCCATCTGAATCTCAGAGTCACTCAGTTCTaGATGAGAGATTCTTGCATAGCCCAACCTGATCAG | + |
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Preference number: 6 (lower is better) Translates to: EFGHLNLRVTQF*MRDSCIAQPDQ Trigger: CTGATCAGGTTGGGCTATGCAAGAATCTCTCATGCAGAACTGAGTGACTCTGAGATTCAGATGGCCAAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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| CDS CCA 72 bp | GCACAGCTACGGCACTCAATGTCAGAATTACTCTGTTaGACATCTGATAGCTCCAAATTGGGTTTAATGATG | + |
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Preference number: 6 (lower is better) Translates to: AQLRHSMSELLC*TSDSSKLGLMM Trigger: CATCATTAAACCCAATTTGGAGCTATCAGATGTCCAACAGAGTAATTCTGACATTGAGTGCCGTAGCTGTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031040.13 ENSMUST00000065543.8 |
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