Pregenerated sensors for CWF19L2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025898Ensembl transcript IDs: ENSMUST00000027027.7
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAGGAACCATaGGGAAGAAAACAGCTTGACCTAATATGGCTGTCAGTGACTAGA | + |
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Preference number: 1 (lower is better) Translates to: VVLTPQSPKPCFQEP*GRKQLDLIWLSVTR Trigger: TCTAGTCACTGACAGCCATATTAGGTCAAGCTGTTTTCTTCCTCATGGTTCCTGGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| 3UTR CAA 90 bp | TCTAGTAGACACAGAATGAAATGTGAGCCCATAATATTGATACAGTaGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAGGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: SSRHRMKCEPIILIQ*FLLHSHPNHVSRNH Trigger: ATGGTTCCTGGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGGCTCACATTTCATTCTGTGTCTACTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| 3UTR CAA 90 bp | TTTGGTACATCTAGTAGACACAGAATGAAATGTGAGCCCATAATATaGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FGTSSRHRMKCEPII*IQLFLLHSHPNHVS Trigger: GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGGCTCACATTTCATTCTGTGTCTACTAGATGTACCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| 3UTR TCA 72 bp | ACTCCACAGTCACCCAAACCATGTTTCCAGGAACCATaGGGAAGAAAACAGCTTGACCTAATATGGCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: TPQSPKPCFQEP*GRKQLDLIWLS Trigger: TGACAGCCATATTAGGTCAAGCTGTTTTCTTCCTCATGGTTCCTGGAAACATGGTTTGGGTGACTGTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| 3UTR-3UTR CAA 90 bp | GCATCAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTAGAGCCCAAAGCACAGTaGTTTGTAAATATAATAGAC | + |
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Preference number: 3 (lower is better) Translates to: ASTSNWNQDKSRGGTEMLEPKAQ*FVNIID Trigger: GTCTATTATATTTACAAACAACTGTGCTTTGGGCTC...TAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| 3UTR-3UTR CAA 90 bp | ACTGTGGCAAATCCAATAGCTGAAAAGATTATAATAGTCATCTCACCTGTTTACGTACCTTTAATCAAGTaGGAACAACAGAACATCTCC | + |
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Preference number: 3 (lower is better) Translates to: TVANPIAEKIIIVISPVYVPLIK*EQQNIS Trigger: GGAGATGTTCTGTTGTTCCAACTTGATTAAAGGTAC...GTAAACAGGTGAGATGACTATTATAATCTTTTCAGCTATTGGATTTGCCACAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCACTCATCTTCAGAGCTTaGGGAGCTGTCAGTCGACTC | + |
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Preference number: 4 (lower is better) Translates to: GSRHTFPCSLARPLETSPLIFRA*GAVSRL Trigger: GAGTCGACTGACAGCTCCGCAAGCTCTGAAGATGAG...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCATTTCCTTTTCAGCTTTaGGTGATGATGAGGACACAG | + |
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Preference number: 4 (lower is better) Translates to: GSRHTFPCSLARPLETSPFPFQL*VMMRTQ Trigger: CTGTGTCCTCATCATCACTCAAAGCTGAAAAGGAAA...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCACAATGCAAAGAAGCCTaGGCCACTAATGGAGAATAT | + |
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Preference number: 4 (lower is better) Translates to: GSRHTFPCSLARPLETSPQCKEA*ATNGEY Trigger: ATATTCTCCATTAGTGGCTCAGGCTTCTTTGCATTG...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCATCCTTCTTACCAAGATaGTCTTTCTCAGCTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GSRHTFPCSLARPLETSPSFLPR*SFSAAL Trigger: CAAAGCAGCTGAGAAAGAGCATCTTGGTAAGAAGGA...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | GCATCAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTAGCACTTTGCCATTTTTaGAGCAAGACTCTGGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: ASTSNWNQDKSRGGTEMLALCHF*SKTLVL Trigger: GAGCACCAGAGTCTTGCTGCAAAAATGGCAAAGTGC...TAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTGTAACACCTCGGCCCTaGCATTACGGGTCTGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTVTPRP*HYGSVL Trigger: AAGAACAGACCCGTAATGCCAGGGCCGAGGTGTTAC...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTTCTTTGTCAGATATCTaGGAGGGAGCAGCCTCAACC | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFSLSDI*EGAAST Trigger: GGTTGAGGCTGCTCCCTCCCAGATATCTGACAAAGA...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTGGTGGACTCTGCCTCTaGACCAGCGATTGTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTGGLCL*TSDCQC Trigger: ACATTGACAATCGCTGGTCCAGAGGCAGAGTCCACC...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCACAATGGCTTTTTATCTaGAGGCTTCCTGTTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GSRHTFPCSLARPLETSPQWLFI*RLPVFL Trigger: CAAGAAAACAGGAAGCCTTCAGATAAAAAGCCATTG...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | GCATCAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTACCCGTCCTTCCAGTATaGATTCAATTCTCTTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: ASTSNWNQDKSRGGTEMLPVLPV*IQFSFE Trigger: CTCGAAAGAGAATTGAATCCATACTGGAAGGACGGG...TAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | GCATCAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTACATTTAAGATATAGGTaGACTCTGCCTCTGGACCAG | + |
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Preference number: 4 (lower is better) Translates to: ASTSNWNQDKSRGGTEMLHLRYR*TLPLDQ Trigger: CTGGTCCAGAGGCAGAGTCCACCTATATCTTAAATG...TAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTTTTGCAGCAAGACTCTaGTGCTCAGCAATCGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFFAARL*CSAIAL Trigger: AAGAGCGATTGCTGAGCACCAGAGTCTTGCTGCAAA...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCACTTCATCTAATACAGTaGCTGCTTGATGATGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: GSRHTFPCSLARPLETSPLHLIQ*LLDDVA Trigger: TGCAACATCATCAAGCAGCCACTGTATTAGATGAAG...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTTCGACTGCAGGATGCTaGACTTTCTTCACTGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTSTAGC*TFFTVL Trigger: GAGAACAGTGAAGAAAGTTCAGCATCCTGCAGTCGA...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTATCACCCACTTCCTTTaGGAGAGGGATACACTCATA | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFITHFL*ERDTLI Trigger: TATGAGTGTATCCCTCTCCCAAAGGAAGTGGGTGAT...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTACACTGTGCTCTATCTaGATATGTAGGCTTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFTLCSI*ICRLSP Trigger: TGGAGAAAGCCTACATATTCAGATAGAGCACAGTGT...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | CCCATAATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCGTTGCTGCTATTTGCTaGCTCCATTTCCAGGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: PIILIQLFLLHSHPNHVSVAAIC*LHFQVS Trigger: AGACACCTGGAAATGGAGCCAGCAAATAGCAGCAAC...GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTCTTTCTCAGCTGCTTTaGAGACAAACATGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFLSQLL*RQTCHP Trigger: TGGATGACATGTTTGTCTCCAAAGCAGCTGAGAAAG...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | CCCATAATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCATTCCCCATCATTTCTaGCTTGATAATCTTGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: PIILIQLFLLHSHPNHVSIPHHF*LDNLGP Trigger: GGGGCCAAGATTATCAAGGCAGAAATGATGGGGAAT...GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTACAGTAAAGGCACTTTaGCATTTTTGCAGCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFTVKAL*HFCSKT Trigger: AGTCTTGCTGCAAAAATGGCAAAGTGCCTTTACTGT...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | AGACACAGAATGAAATGTGAGCCCATAATATTGATACAGTTGTTCTTACTCCACAAATTATGTTTGGCCTaGCGTAACACCTCGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RHRMKCEPIILIQLFLLHKLCLA*RNTSAL Trigger: CAGGGCCGAGGTGTTACGCCAGGCCAAACATAATTT...GTGGAGTAAGAACAACTGTATCAATATTATGGGCTCACATTTCATTCTGTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTAATGATTTCTTCCTCTaGTCCTCAAAGCTTTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTNDFFL*SSKLSR Trigger: CCGAGAAAGCTTTGAGGACCAGAGGAAGAAATCATT...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTCTTCACTGTTCTCTGTaGGTTTTCGAAAGTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTLHCSL*VFESHN Trigger: ATTGTGACTTTCGAAAACTCACAGAGAACAGTGAAG...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTCCAGCATACCACCAATaGTTTCCTTTCCAAAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTPAYHQ*FPFQSN Trigger: ATTACTTTGGAAAGGAAATCATTGGTGGTATGCTGG...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | CCCATAATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCTATGGTTTCCACCACTaGGCAAACTGCAATGATTTC | + |
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Preference number: 4 (lower is better) Translates to: PIILIQLFLLHSHPNHVSYGFHH*ANCNDF Trigger: GAAATCATTGCAGTTTGCTCAGTGGTGGAAACCATA...GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTAGCTTTTACTTTTGGTaGTATCATATGGTTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: QRWDRNATDSVDFEAGVFSFYFW*YHMVST Trigger: GGTGGAAACCATATGATATCACCAAAAGTAAAAGCT...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | AATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAGGAAGACTGCTCTAACACTTaGGTTTTCTCCCGCTCTATT | + |
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Preference number: 4 (lower is better) Translates to: NIDTVVLTPQSPKPCFQEDCSNT*VFSRSI Trigger: AATAGAGCGGGAGAAAACCCAAGTGTTAGAGCAGTC...TTCCTGGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | TTAAAAAGCACAAAAGAACCTAGATGGCAGACTCTACCTGGAAGCAGACACACTTTTGGTGATATCATATaGTTTCCACCACTGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LKSTKEPRWQTLPGSRHTFGDII*FPPLSK Trigger: TTTGCTCAGTGGTGGAAACCATATGATATCACCAAA...AGTGTGTCTGCTTCCAGGTAGAGTCTGCCATCTAGGTTCTTTTGTGCTTTTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR TCA 90 bp | ACTGTGGCAAATCCAATAGCTGAAAAGATTATAATAGTCATCTCACCTGTTTACCTCAGAATGTTCCTGTaGGAACTGTTCAATTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVANPIAEKIIIVISPVYLRMFL*ELFNSL Trigger: GAGCGAATTGAACAGTTCTCACAGGAACATTCTGAG...GTAAACAGGTGAGATGACTATTATAATCTTTTCAGCTATTGGATTTGCCACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| 3UTR CAA 72 bp | TCTAGTAGACACAGAATGAAATGTGAGCCCATAATATaGATACAGTTGTTCTTACTCCACAGTCACCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSRHRMKCEPII*IQLFLLHSHPN Trigger: GTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGGCTCACATTTCATTCTGTGTCTACTAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGGCAAATCCAATAGCTGAAAAGATTATAATAGTCATCTCACCTGTTTACTCTCTTCCTTCGTTCTaGTTTCATATCCAGGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: TVANPIAEKIIIVISPVYSLPSF*FHIQGF Trigger: GAAACCCTGGATATGAAAGCAGAACGAAGGAAGAGA...GTAAACAGGTGAGATGACTATTATAATCTTTTCAGCTATTGGATTTGCCACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR GCA 90 bp | ACTGTGGCAAATCCAATAGCTGAAAAGATTATAATAGTCATCTCACCTGTTTACATGCTCTTTCTCAGCTaGTTTGGAGACAAACATGTC | + |
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Preference number: 4 (lower is better) Translates to: TVANPIAEKIIIVISPVYMLFLS*FGDKHV Trigger: GACATGTTTGTCTCCAAAGCAGCTGAGAAAGAGCAT...GTAAACAGGTGAGATGACTATTATAATCTTTTCAGCTATTGGATTTGCCACAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CCA 90 bp | AGACACAGAATGAAATGTGAGCCCATAATATTGATACAGTTGTTCTTACTCCACTTTGCCTCTTTAAGTTaGGCTTTAAGTTGTTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RHRMKCEPIILIQLFLLHFASLS*ALSCSA Trigger: AGCTGAACAACTTAAAGCCCAACTTAAAGAGGCAAA...GTGGAGTAAGAACAACTGTATCAATATTATGGGCTCACATTTCATTCTGTGTCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 90 bp | AGATATCTGGGAGGGAGCAGCCTCAACCCACTCATCTTCAGAGCTTaGGGAGCTGTCAGTCGACTCACTCTGTTTCTGACATTTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: RYLGGSSLNPLIFRA*GAVSRLTLFLTFLF Trigger: AAACAGAAATGTCAGAAACAGAGTGAGTCGACTGACAGCTCCGCAAGCTCTGAAGATGAGTGGGTTGAGGCTGCTCCCTCCCAGATATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | GGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTAGAAACAAGTCCAGAAGTATACAGGTTTTaGATGGGAGACCTGTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: GSRHTFPCSLARPLETSPEVYRF*MGDLSP Trigger: GGGGGACAGGTCTCCCATCAAAAACCTGTATACTTC...TGGACTTGTTTCTAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 90 bp | GTGCTGGTTGGCGTTGTAGCTCCAGGTTTCCAATGGCTTTTTATCTaGAGGCTTCCTGTTTTCTTGTCGCCTATCAGATCGACTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: VLVGVVAPGFQWLFI*RLPVFLSPIRSTAG Trigger: TCCTGCAGTCGATCTGATAGGCGACAAGAAAACAGGAAGCCTTCAGATAAAAAGCCATTGGAAACCTGGAGCTACAACGCCAACCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CCA 90 bp | GTCCTTTTGTCTTTCACTTTCCAGGTCTTTTCTTTGTCAGATATCTaGGAGGGAGCAGCCTCAACCCACTCATCTTCAGAGCTTGCGGAG | + |
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Preference number: 5 (lower is better) Translates to: VLLSFTFQVFSLSDI*EGAASTHSSSELAE Trigger: CTCCGCAAGCTCTGAAGATGAGTGGGTTGAGGCTGCTCCCTCCCAGATATCTGACAAAGAAAAGACCTGGAAAGTGAAAGACAAAAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | GCATCAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTAACTCATCTTCAGAGCTaGCGGAGCTGTCAGTCGACT | + |
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Preference number: 5 (lower is better) Translates to: ASTSNWNQDKSRGGTEMLTHLQS*RSCQST Trigger: AGTCGACTGACAGCTCCGCAAGCTCTGAAGATGAGT...TAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CAGACTCTACCTGGAAGCAGACACACTTTCCCCTGTAGCCTTGCTAGACCTCTATCTTTCTCAGCTGCTTaGGAGACAAACATGTCATCC | + |
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Preference number: 5 (lower is better) Translates to: QTLPGSRHTFPCSLARPLSFSAA*ETNMSS Trigger: GGATGACATGTTTGTCTCCAAAGCAGCTGAGAAAGA...TAGAGGTCTAGCAAGGCTACAGGGGAAAGTGTGTCTGCTTCCAGGTAGAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | GCATCAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTAAGTCTGATGTGCCACTaGCTTGACTACACTGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ASTSNWNQDKSRGGTEMLSLMCH*LDYTVL Trigger: GAGCACAGTGTAGTCAAGCAAGTGGCACATCAGACT...TAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 90 bp | TCAGCAATCGCTCTTCTCCTCTGGCTCTCTTCCTTCTTACCAAGATaGTCTTTCTCAGCTGCTTTGGAGACAAACATGTCATCCAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: SAIALLLWLSSFLPR*SFSAALETNMSSRV Trigger: TACTCTGGATGACATGTTTGTCTCCAAAGCAGCTGAGAAAGAGCATCTTGGTAAGAAGGAAGAGAGCCAGAGGAGAAGAGCGATTGCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CAGAGGTGGGACAGAAATGCTACAGATTCAGTAGACTTTGAGGCAGGAGTATTTCCCATCATTTCTGCCTaGATAATCTTGGCCCCCAAC | + |
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Preference number: 5 (lower is better) Translates to: QRWDRNATDSVDFEAGVFPIISA*IILAPN Trigger: GTTGGGGGCCAAGATTATCAAGGCAGAAATGATGGG...AAATACTCCTGCCTCAAAGTCTACTGAATCTGTAGCATTTCTGTCCCACCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 90 bp | AGGCTTCCTGTTTTCTTGTCGCCTATCAGATCGACTGCAGGATGCTaGACTTTCTTCACTGTTCTCTGTGAGTTTTCGAAAGTCACAATG | + |
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Preference number: 5 (lower is better) Translates to: RLPVFLSPIRSTAGC*TFFTVLCEFSKVTM Trigger: CATTGTGACTTTCGAAAACTCACAGAGAACAGTGAAGAAAGTTCAGCATCCTGCAGTCGATCTGATAGGCGACAAGAAAACAGGAAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 90 bp | TTTTTCTTCTCAGAATGTTCCTGTGAGAACTGTTCAATTCGCTCATaGACATCAGGAAGCATCCATGTGTCCTCATCCCGAAGTCGCTTA | + |
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Preference number: 5 (lower is better) Translates to: FFFSECSCENCSIRS*TSGSIHVSSSRSRL Trigger: TAAGCGACTTCGGGATGAGGACACATGGATGCTTCCTGATGTGCATGAGCGAATTGAACAGTTCTCACAGGAACATTCTGAGAAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 90 bp | CCGTCCTTCCAGTATGGATTCAATTCTCTTTCGAGCAGTTTGGACTaGTCTAACACTTGGGTTTTCTCCCGCTCTATTTGTCTTAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: PSFQYGFNSLSSSLD*SNTWVFSRSICLRV Trigger: AACTCTAAGACAAATAGAGCGGGAGAAAACCCAAGTGTTAGAGCAGTCCAAACTGCTCGAAAGAGAATTGAATCCATACTGGAAGGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTACAGAGTTTCCTTTTCAGCTTaGAGTGATGATGAGGACACA | + |
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Preference number: 5 (lower is better) Translates to: QQVTGTRTKAEVGQKCYRVSFSA*SDDEDT Trigger: TGTGTCCTCATCATCACTCAAAGCTGAAAAGGAAAC...TCTGTAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CAACAAGTAACTGGAACCAGGACAAAAGCAGAGGTGGGACAGAAATGCTACAGACTTTATCCTCATGGGTaGAAACTCTCTTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: QQVTGTRTKAEVGQKCYRLYPHG*KLSFSS Trigger: GGAAGAGAAAGAGAGTTTCAACCCATGAGGATAAAG...TCTGTAGCATTTCTGTCCCACCTCTGCTTTTGTCCTGGTTCCAGTTACTTGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 90 bp | TCATCTTCAGAGCTTGCGGAGCTGTCAGTCGACTCACTCTGTTTCTaGCATTTCTGTTTCTTCCTCTTCTTCTTCTTCTCTTTCTTCACT | + |
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Preference number: 5 (lower is better) Translates to: SSSELAELSVDSLCF*HFCFFLFFFFSFFT Trigger: AGTGAAGAAAGAGAAGAAGAAGAAGAGGAAGAAACAGAAATGTCAGAAACAGAGTGAGTCGACTGACAGCTCCGCAAGCTCTGAAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 90 bp | TATCAGATCGACTGCAGGATGCTGAACTTTCTTCACTGTTCTCTGTaGGTTTTCGAAAGTCACAATGCAAAGAAGCCTGAGCCACTAATG | + |
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Preference number: 5 (lower is better) Translates to: YQIDCRMLNFLHCSL*VFESHNAKKPEPLM Trigger: CATTAGTGGCTCAGGCTTCTTTGCATTGTGACTTTCGAAAACTCACAGAGAACAGTGAAGAAAGTTCAGCATCCTGCAGTCGATCTGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 90 bp | TCTCCTCTGGCTCTCTTCCTTCTTACCAAGATGCTCTTTCTCAGCTaGTTTGGAGACAAACATGTCATCCAGAGTATAATTGTCTTCATC | + |
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Preference number: 5 (lower is better) Translates to: SPLALFLLTKMLFLS*FGDKHVIQSIIVFI Trigger: GATGAAGACAATTATACTCTGGATGACATGTTTGTCTCCAAAGCAGCTGAGAAAGAGCATCTTGGTAAGAAGGAAGAGAGCCAGAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CCCATAATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCTTCCAGGTCTTTTCTTaGTCAGATATCTGGGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PIILIQLFLLHSHPNHVSFQVFS*SDIWEG Trigger: TCCCTCCCAGATATCTGACAAAGAAAAGACCTGGAA...GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | AATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAGGAATATCACCCACTTCCTTaGGGAGAGGGATACACTCAT | + |
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Preference number: 5 (lower is better) Translates to: NIDTVVLTPQSPKPCFQEYHPLP*GEGYTH Trigger: ATGAGTGTATCCCTCTCCCAAAGGAAGTGGGTGATA...TTCCTGGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 90 bp | TCTGAGAGATTTTTACATTTCACTAAGTCTGATGTGCCACTTGCTTaGCTACACTGTGCTCTATCTGAATATGTAGGCTTTCTCCACCGT | + |
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Preference number: 5 (lower is better) Translates to: SERFLHFTKSDVPLA*LHCALSEYVGFLHR Trigger: ACGGTGGAGAAAGCCTACATATTCAGATAGAGCACAGTGTAGTCAAGCAAGTGGCACATCAGACTTAGTGAAATGTAAAAATCTCTCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CCA 90 bp | TCTGGCTCTCTTCCTTCTTACCAAGATGCTCTTTCTCAGCTGCTTTaGAGACAAACATGTCATCCAGAGTATAATTGTCTTCATCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SGSLPSYQDALSQLL*RQTCHPEYNCLHLI Trigger: AATCAGATGAAGACAATTATACTCTGGATGACATGTTTGTCTCCAAAGCAGCTGAGAAAGAGCATCTTGGTAAGAAGGAAGAGAGCCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | AATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAGGAATATAGTTGCTGCTATTaGCTGGCTCCATTTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: NIDTVVLTPQSPKPCFQEYSCCY*LAPFPG Trigger: ACCTGGAAATGGAGCCAGCAAATAGCAGCAACTATA...TTCCTGGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CCCATAATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAACAGTAAAGGCACTTaGCCATTTTTGCAGCAAGAC | + |
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Preference number: 5 (lower is better) Translates to: PIILIQLFLLHSHPNHVSNSKGT*PFLQQD Trigger: GTCTTGCTGCAAAAATGGCAAAGTGCCTTTACTGTT...GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | ACTGTGGCAAATCCAATAGCTGAAAAGATTATAATAGTCATCTCACCTGTTTACTGTCAATGTCATGTCTaGCTGAAGTCCTCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: TVANPIAEKIIIVISPVYCQCHV*LKSSSW Trigger: CCAGGAAGAGGACTTCAGCAAGACATGACATTGACA...GTAAACAGGTGAGATGACTATTATAATCTTTTCAGCTATTGGATTTGCCACAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | CCCATAATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCATTTGCCTCTTTAAGTaGGGCTTTAAGTTGTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: PIILIQLFLLHSHPNHVSICLFK*GFKLFS Trigger: GCTGAACAACTTAAAGCCCAACTTAAAGAGGCAAAT...GGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATTATGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 90 bp | TCTGTTCCTATTTTCTCATTCTTGACTAAATCTTTGAGGCTCAAATaGTCATCATCAGGAAAGTATCGGACCCTTTCTTTATCCTCATGG | + |
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Preference number: 5 (lower is better) Translates to: SVPIFSFLTKSLRLK*SSSGKYRTLSLSSW Trigger: CCATGAGGATAAAGAAAGGGTCCGATACTTTCCTGATGATGATCATTTGAGCCTCAAAGATTTAGTCAAGAATGAGAAAATAGGAACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | AGACACAGAATGAAATGTGAGCCCATAATATTGATACAGTTGTTCTTACTCCACATCTTGGCCCCCAACTaGTTCTTTTCATCAACATTT | + |
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Preference number: 5 (lower is better) Translates to: RHRMKCEPIILIQLFLLHILAPN*FFSSTF Trigger: AAATGTTGATGAAAAGAACAAGTTGGGGGCCAAGAT...GTGGAGTAAGAACAACTGTATCAATATTATGGGCTCACATTTCATTCTGTGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | AATATTGATACAGTTGTTCTTACTCCACAGTCACCCAAACCATGTTTCCAGGAACCTATTTTCTCATTCTaGACTAAATCTTTGAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: NIDTVVLTPQSPKPCFQEPIFSF*TKSLRL Trigger: GAGCCTCAAAGATTTAGTCAAGAATGAGAAAATAGG...TTCCTGGAAACATGGTTTGGGTGACTGTGGAGTAAGAACAACTGTATCAATATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS-3UTR CAA 90 bp | ACTGTGGCAAATCCAATAGCTGAAAAGATTATAATAGTCATCTCACCTGTTTACACGTTCTTCACCCCTTaGTTCTTTCTCAAAATTATG | + |
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Preference number: 5 (lower is better) Translates to: TVANPIAEKIIIVISPVYTFFTP*FFLKIM Trigger: CATAATTTTGAGAAAGAACAAAGGGGTGAAGAACGT...GTAAACAGGTGAGATGACTATTATAATCTTTTCAGCTATTGGATTTGCCACAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 90 bp | CAGATATCTGGGAGGGAGCAGCCTCAACCCACTCATCTTCAGAGCTaGCGGAGCTGTCAGTCGACTCACTCTGTTTCTGACATTTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QISGREQPQPTHLQS*RSCQSTHSVSDISV Trigger: AACAGAAATGTCAGAAACAGAGTGAGTCGACTGACAGCTCCGCAAGCTCTGAAGATGAGTGGGTTGAGGCTGCTCCCTCCCAGATATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CCA 72 bp | CAAAATTATGTTTGGCCTGGCGTAACACCTCGGCCCTaGCATTACGGGTCTGTTCTTTTCGCTCTTCGATAC | + |
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Preference number: 6 (lower is better) Translates to: QNYVWPGVTPRP*HYGSVLFALRY Trigger: GTATCGAAGAGCGAAAAGAACAGACCCGTAATGCCAGGGCCGAGGTGTTACGCCAGGCCAAACATAATTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 90 bp | AGTCGCTTACGTTCTTCACCCCTTTGTTCTTTCTCAAAATTATGTTaGGCCTGGCGTAACACCTCGGCCCTGGCATTACGGGTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SRLRSSPLCSFSKLC*AWRNTSALALRVCS Trigger: AGAACAGACCCGTAATGCCAGGGCCGAGGTGTTACGCCAGGCCAAACATAATTTTGAGAAAGAACAAAGGGGTGAAGAACGTAAGCGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 90 bp | CATCAACATTTAAGATATAGGTGGACTCTGCCTCTGGACCAGCGATaGTCAATGTCATGTCTTGCTGAAGTCCTCTTCCTGGTGGATCAC | + |
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Preference number: 6 (lower is better) Translates to: HQHLRYRWTLPLDQR*SMSCLAEVLFLVDH Trigger: GTGATCCACCAGGAAGAGGACTTCAGCAAGACATGACATTGACAATCGCTGGTCCAGAGGCAGAGTCCACCTATATCTTAAATGTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 72 bp | GGCGTTGTAGCTCCAGGTTTCCAATGGCTTTTTATCTaGAGGCTTCCTGTTTTCTTGTCGCCTATCAGATCG | + |
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Preference number: 6 (lower is better) Translates to: GVVAPGFQWLFI*RLPVFLSPIRS Trigger: CGATCTGATAGGCGACAAGAAAACAGGAAGCCTTCAGATAAAAAGCCATTGGAAACCTGGAGCTACAACGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 72 bp | TCAGAATGTTCCTGTGAGAACTGTTCAATTCGCTCATaGACATCAGGAAGCATCCATGTGTCCTCATCCCGA | + |
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Preference number: 6 (lower is better) Translates to: SECSCENCSIRS*TSGSIHVSSSR Trigger: TCGGGATGAGGACACATGGATGCTTCCTGATGTGCATGAGCGAATTGAACAGTTCTCACAGGAACATTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CCA 72 bp | TCTTTCACTTTCCAGGTCTTTTCTTTGTCAGATATCTaGGAGGGAGCAGCCTCAACCCACTCATCTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: SFTFQVFSLSDI*EGAASTHSSSE Trigger: CTCTGAAGATGAGTGGGTTGAGGCTGCTCCCTCCCAGATATCTGACAAAGAAAAGACCTGGAAAGTGAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 72 bp | TTAAGATATAGGTGGACTCTGCCTCTGGACCAGCGATaGTCAATGTCATGTCTTGCTGAAGTCCTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRYRWTLPLDQR*SMSCLAEVLFL Trigger: CAGGAAGAGGACTTCAGCAAGACATGACATTGACAATCGCTGGTCCAGAGGCAGAGTCCACCTATATCTTAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CCA 72 bp | CCTTCCAGTATGGATTCAATTCTCTTTCGAGCAGTTTaGACTGCTCTAACACTTGGGTTTTCTCCCGCTCTA | + |
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Preference number: 6 (lower is better) Translates to: PSSMDSILFRAV*TALTLGFSPAL Trigger: TAGAGCGGGAGAAAACCCAAGTGTTAGAGCAGTCCAAACTGCTCGAAAGAGAATTGAATCCATACTGGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 72 bp | TCCTTCCAGTATGGATTCAATTCTCTTTCGAGCAGTTaGGACTGCTCTAACACTTGGGTTTTCTCCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SFQYGFNSLSSS*DCSNTWVFSRS Trigger: AGAGCGGGAGAAAACCCAAGTGTTAGAGCAGTCCAAACTGCTCGAAAGAGAATTGAATCCATACTGGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 72 bp | GTTTTCTTGTCGCCTATCAGATCGACTGCAGGATGCTaGACTTTCTTCACTGTTCTCTGTGAGTTTTCGAAA | + |
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Preference number: 6 (lower is better) Translates to: VFLSPIRSTAGC*TFFTVLCEFSK Trigger: TTTCGAAAACTCACAGAGAACAGTGAAGAAAGTTCAGCATCCTGCAGTCGATCTGATAGGCGACAAGAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS GCA 72 bp | CAGTATGGATTCAATTCTCTTTCGAGCAGTTTGGACTaGTCTAACACTTGGGTTTTCTCCCGCTCTATTTGT | + |
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Preference number: 6 (lower is better) Translates to: QYGFNSLSSSLD*SNTWVFSRSIC Trigger: ACAAATAGAGCGGGAGAAAACCCAAGTGTTAGAGCAGTCCAAACTGCTCGAAAGAGAATTGAATCCATACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CCA 72 bp | AATTCTCTTTCGAGCAGTTTGGACTGCTCTAACACTTaGGTTTTCTCCCGCTCTATTTGTCTTAGAGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: NSLSSSLDCSNT*VFSRSICLRVS Trigger: GGAAACTCTAAGACAAATAGAGCGGGAGAAAACCCAAGTGTTAGAGCAGTCCAAACTGCTCGAAAGAGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 90 bp | AGGCCACATTCTTCCAGACTTATCTGTTTGAATAAGGATTACTTCTaGTTCATCTTCATGCTCTACGCCCAATCTTTTTGCCGGCATCTG | + |
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Preference number: 6 (lower is better) Translates to: RPHSSRLICLNKDYF*FIFMLYAQSFCRHL Trigger: CAGATGCCGGCAAAAAGATTGGGCGTAGAGCATGAAGATGAACAAGAAGTAATCCTTATTCAAACAGATAAGTCTGGAAGAATGTGGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 72 bp | ATGGACATAAAATCAATAGTCATCCACTCATCACGCTaGATATCGTGGCTGTCACATTCTTCTTCTGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: MDIKSIVIHSSR*ISWLSHSSSVL Trigger: AAGGACAGAAGAAGAATGTGACAGCCACGATATTCAGCGTGATGAGTGGATGACTATTGATTTTATGTCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS TCA 72 bp | TCTGTGAGTTTTCGAAAGTCACAATGCAAAGAAGCCTaGGCCACTAATGGAGAATATGAACTAGATGATTCA | + |
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Preference number: 6 (lower is better) Translates to: SVSFRKSQCKEA*ATNGEYELDDS Trigger: TGAATCATCTAGTTCATATTCTCCATTAGTGGCTCAGGCTTCTTTGCATTGTGACTTTCGAAAACTCACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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| CDS CAA 72 bp | TCTTCCAGACTTATCTGTTTGAATAAGGATTACTTCTaGTTCATCTTCATGCTCTACGCCCAATCTTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: SSRLICLNKDYF*FIFMLYAQSFC Trigger: GCAAAAAGATTGGGCGTAGAGCATGAAGATGAACAAGAAGTAATCCTTATTCAAACAGATAAGTCTGGAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027027.7 |
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