Pregenerated sensors for CWC25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018541Ensembl transcript IDs: ENSMUST00000018685.9, ENSMUST00000107579.2, ENSMUST00000152395.2
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGGAGGATGGGGATGGCCTAACCGCAGCCAGCACTCAGGAGGCTaGGGCAGGAGAGCCACCATCAGGCTGCCCTGGACCAGCAAGGGC | + |
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Preference number: 1 (lower is better) Translates to: AGGWGWPNRSQHSGG*GRRATIRLPWTSKG Trigger: GCCCTTGCTGGTCCAGGGCAGCCTGATGGTGGCTCTCCTGCCTCAGCCTCCTGAGTGCTGGCTGCGGTTAGGCCATCCCCATCCTCCAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR GCA 90 bp | TCTGGACACAGACAACAGCACCACCAGCCCCAGCAGTGGGCCAGCTaGCACATGACCTCGTGGAGCCCATGCAGGTGGGGCCCAGGTATG | + |
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Preference number: 1 (lower is better) Translates to: SGHRQQHHQPQQWAS*HMTSWSPCRWGPGM Trigger: CATACCTGGGCCCCACCTGCATGGGCTCCACGAGGTCATGTGGCAGCTGGCCCACTGCTGGGGCTGGTGGTGCTGTTGTCTGTGTCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| 3UTR GCA 90 bp | GCAGCCAGCACTCAGGAGGCTGAGGCAGGAGAGCCACCATCAGGCTaGCCTGGACCAGCAAGGGCCCTGTATCACAGACAAACCACAAAG | + |
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Preference number: 1 (lower is better) Translates to: AASTQEAEAGEPPSG*PGPARALYHRQTTK Trigger: CTTTGTGGTTTGTCTGTGATACAGGGCCCTTGCTGGTCCAGGGCAGCCTGATGGTGGCTCTCCTGCCTCAGCCTCCTGAGTGCTGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CCA 90 bp | ACAGACAAACCACAAAGCAGCAGTGGCAGGAGCAGCAACTGTGTGTaGTCAGAGGAGCTAAAGTGCAGGGTCACCGTCAGCTCCCCGGTC | + |
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Preference number: 1 (lower is better) Translates to: TDKPQSSSGRSSNCV*SEELKCRVTVSSPV Trigger: GACCGGGGAGCTGACGGTGACCCTGCACTTTAGCTCCTCTGACCACACACAGTTGCTGCTCCTGCCACTGCTGCTTTGTGGTTTGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR GCA 90 bp | AGAAGCCTTGGATCTCCCTGGAGCTGGACTTACAAAGCTCTGAACTaGCTGGCCTGGGTACTGAGGTCCACACACAGGTCCTCTGCAGGA | + |
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Preference number: 1 (lower is better) Translates to: RSLGSPWSWTYKALN*LAWVLRSTHRSSAG Trigger: TCCTGCAGAGGACCTGTGTGTGGACCTCAGTACCCAGGCCAGGCAGTTCAGAGCTTTGTAAGTCCAGCTCCAGGGAGATCCAAGGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR GCA 90 bp | AGGAGATGTGCTTGTCACACAACACAAGTGTCTCAGCATCCACCTTaGAGCACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: RRCACHTTQVSQHPP*STQVRKLSQAGAVA Trigger: TGCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTGCTGCAAGGTGGATGCTGAGACACTTGTGTTGTGTGACAAGCACATCTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR CCA 90 bp | GGACCAGCAAGGGCCCTGTATCACAGACAAACCACAAAGCAGCAGTaGCAGGAGCAGCAACTGTGTGTGGTCAGAGGAGCTAAAGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: GPARALYHRQTTKQQ*QEQQLCVVRGAKVQ Trigger: CTGCACTTTAGCTCCTCTGACCACACACAGTTGCTGCTCCTGCCACTGCTGCTTTGTGGTTTGTCTGTGATACAGGGCCCTTGCTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR TCA 90 bp | CTTCCCAAGTATTTTCTTTCAGGAGTCATCGGACAACATGGGTCCTaGTTCCTGCCCCACTGGGTGCCCACTGTAGGATGCCGAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: LPKYFLSGVIGQHGS*FLPHWVPTVGCRGT Trigger: TGTTCCTCGGCATCCTACAGTGGGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGAAAATACTTGGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CCA 90 bp | TTCAGGTGGGAGGGAAGAGGGATAACAAGCATCCAAGCCGTCCAGTaGCAGCCACTAAAACACAGTCAAACCCCACAGTGCATCCACATC | + |
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Preference number: 1 (lower is better) Translates to: FRWEGRGITSIQAVQ*QPLKHSQTPQCIHI Trigger: GATGTGGATGCACTGTGGGGTTTGACTGTGTTTTAGTGGCTGCCACTGGACGGCTTGGATGCTTGTTATCCCTCTTCCCTCCCACCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR TCA 90 bp | GGCCATATGGTGGAAGGAGAGAACCAACTCCCAAAAACAGTCCTCTaGCCTCCACACACACACTGTGGCATGTATACACATGTGGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: GHMVEGENQLPKTVL*PPHTHCGMYTHVGS Trigger: AGAACCCACATGTGTATACATGCCACAGTGTGTGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCTTCCACCATATGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR TCA 90 bp | AGCTCTAGGTTTAGCAAGAGGACTCAAAACCTGAAGTCAGAGGGCTaGGTAGAGAGCAAGTTCCTACAAAGGAACATGCTGCCAATCCTG | + |
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Preference number: 1 (lower is better) Translates to: SSRFSKRTQNLKSEG*VESKFLQRNMLPIL Trigger: CAGGATTGGCAGCATGTTCCTTTGTAGGAACTTGCTCTCTACTCAGCCCTCTGACTTCAGGTTTTGAGTCCTCTTGCTAAACCTAGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR TCA 90 bp | CTGTCACATAATCTACTAAATAAAGTCAATGTTTGTTTATCCCAGTaGGCACCGTCCATCTGGGTGGCTCTTAAGAGAGGCCTCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: LSHNLLNKVNVCLSQ*APSIWVALKRGLWK Trigger: CTTCCAGAGGCCTCTCTTAAGAGCCACCCAGATGGACGGTGCTCACTGGGATAAACAAACATTGACTTTATTTAGTAGATTATGTGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CCA 90 bp | CGAAATGGCTTAATATATGAATTAAGAGCACCTCTGAGGGCCAGATaGTCTGTAATCACAGCTCCAGAGACTAAAACAGGAGATCTACAG | + |
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Preference number: 1 (lower is better) Translates to: RNGLIYELRAPLRAR*SVITAPETKTGDLQ Trigger: CTGTAGATCTCCTGTTTTAGTCTCTGGAGCTGTGATTACAGACCATCTGGCCCTCAGAGGTGCTCTTAATTCATATATTAAGCCATTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CCA 90 bp | AGGGCTTCTGGTGAAAGAATAGAGAAAGGAATGGCAGTAAAGACATaGGTGTGGCCCCTTGAGTCTTGTCTTAGATTTTTAGTTATTACA | + |
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Preference number: 1 (lower is better) Translates to: RASGERIEKGMAVKT*VWPLESCLRFLVIT Trigger: TGTAATAACTAAAAATCTAAGACAAGACTCAAGGGGCCACACCCATGTCTTTACTGCCATTCCTTTCTCTATTCTTTCACCAGAAGCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR TCA 90 bp | TTGGTTCTGTTTTCTCTTCCAGCTTCTTCAATTCTTGGCTCTTCCTaGTGCTTGGCTATCCTGTCACATAATCTACTAAATAAAGTCAAT | + |
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Preference number: 1 (lower is better) Translates to: LVLFSLPASSILGSS*CLAILSHNLLNKVN Trigger: ATTGACTTTATTTAGTAGATTATGTGACAGGATAGCCAAGCATCAGGAAGAGCCAAGAATTGAAGAAGCTGGAAGAGAAAACAGAACCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACGCCTGGCCTGGGTACTaGGGTCCACACACAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: SQAGAVAHAHLQCQHLDDAWPGY*GPHTGP Trigger: AGGACCTGTGTGTGGACCTCAGTACCCAGGCCAGGC...GTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACAGGTGTGGGACTTACAAAGCTCTaGACTGCCTGGCCTGGGTAC | + |
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Preference number: 2 (lower is better) Translates to: QVRWHTHTFSASIWMTGVGLTKL*TAWPGY Trigger: GTACCCAGGCCAGGCAGTTCAGAGCTTTGTAAGTCC...CACACCTGTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR CAA 90 bp | CAGGAGATGTGCTTGTCACACAACACAAGTGTCTCAGCATCCACCTaGCAGCACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: QEMCLSHNTSVSAST*QHPGKKAEPGRCGG Trigger: GCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTGCTGCAAGGTGGATGCTGAGACACTTGTGTTGTGTGACAAGCACATCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGGACCAGCAAGGGCCCTGTATCACAGACAAACCACAAAGCAGCAGTGGCAGTCAGAGGAGCTAAAGTaGAGGGTCACCGTCAGCTCC | + |
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Preference number: 2 (lower is better) Translates to: PGPARALYHRQTTKQQWQSEELK*RVTVSS Trigger: GGAGCTGACGGTGACCCTGCACTTTAGCTCCTCTGA...CTGCCACTGCTGCTTTGTGGTTTGTCTGTGATACAGGGCCCTTGCTGGTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACAGGTGTGCCTCTGCAGGAGCAATaGGTGCTCTTAACAGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: QVRWHTHTFSASIWMTGVPLQEQ*VLLTAE Trigger: CTCTGCTGTTAAGAGCACGCATTGCTCCTGCAGAGG...CACACCTGTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGACCAGCAAGGGCCCTGTATCACAGACAAACCACAAAGCAGCAGTGGCAGCACCGTCCATCTGGGTaGCTCTTAAGAGAGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PGPARALYHRQTTKQQWQHRPSG*LLREAS Trigger: AGAGGCCTCTCTTAAGAGCCACCCAGATGGACGGTG...CTGCCACTGCTGCTTTGTGGTTTGTCTGTGATACAGGGCCCTTGCTGGTCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAAGCCTTGGATCTCCCTaGAGCTGGACTTACAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: HPGKKAEPGRCGGTRTPSSLGSP*SWTYKA Trigger: AGCTTTGTAAGTCCAGCTCCAGGGAGATCCAAGGCT...TGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGCACACGCACACCTTCACCTAAGGCCATATGGTaGAAGGAGAGAACCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: HPGKKAEPGRCGGTRTPSPKAIW*KERTNS Trigger: GGAGTTGGTTCTCTCCTTCCACCATATGGCCTTAGG...TGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR CCA 90 bp | AATAAAAGGACGTGGGCTGACGGAGAAGGAAGGAAGCCTGTTTGCTGGCTATGCGGGTGCCAGAAGCCTTaGATCTCCCTGGAGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: NKRTWADGEGRKPVCWLCGCQKP*ISLELD Trigger: GTCCAGCTCCAGGGAGATCCAAGGCTTCTGGCACCC...GCATAGCCAGCAAACAGGCTTCCTTCCTTCTCCGTCAGCCCACGTCCTTTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR TCA 90 bp | CACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAGTGTGCACACACAAATaGGGTAAGAGTGATTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HPGKKAEPGRCGGTRTPSVCTHK*GKSDWE Trigger: TTCCCAATCACTCTTACCTCATTTGTGTGTGCACAC...TGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR CCA 90 bp | ATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTCCCAAGGCTGAGTTCCACCAGCCCCAGCAGTaGGCCAGCTGCCACATGACC | + |
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Preference number: 2 (lower is better) Translates to: IIWLETGNSTKSGPKAEFHQPQQ*ASCHMT Trigger: GGTCATGTGGCAGCTGGCCCACTGCTGGGGCTGGTG...GAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| 3UTR-3UTR GCA 90 bp | ATATGGTGGAAGGAGAGAACCAACTCCCAAAAACAGTCCTCTGACCTCCACACAACAGATGCCCGTGGGTaGCAGAAGCCTTGGATCTCC | + |
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Preference number: 2 (lower is better) Translates to: IWWKERTNSQKQSSDLHTTDARG*QKPWIS Trigger: GGAGATCCAAGGCTTCTGGCACCCACGGGCATCTGT...TGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCTTCCACCATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGACCAGCAAGGGCCCTGTATCACAGACAAACCACAAAGCAGCAGTGGCAGAGCTTCTTCAATTCTTaGCTCTTCCTGATGCTTGGC | + |
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Preference number: 2 (lower is better) Translates to: PGPARALYHRQTTKQQWQSFFNS*LFLMLG Trigger: GCCAAGCATCAGGAAGAGCCAAGAATTGAAGAAGCT...CTGCCACTGCTGCTTTGTGGTTTGTCTGTGATACAGGGCCCTTGCTGGTCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR CCA 90 bp | ATATGGTGGAAGGAGAGAACCAACTCCCAAAAACAGTCCTCTGACCTCCACACACTGAACTGCCTGGCCTaGGTACTGAGGTCCACACAC | + |
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Preference number: 2 (lower is better) Translates to: IWWKERTNSQKQSSDLHTLNCLA*VLRSTH Trigger: GTGTGTGGACCTCAGTACCCAGGCCAGGCAGTTCAG...TGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCTTCCACCATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGGGAGAAACTGAGTTTTAAGAATTACAGTGCCAGCCGGTCGTGGTGGCAATCAAAGCTAGCCTaGGCTACAAGAGACCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSGEKLSFKNYSASRSWWQSKLA*ATRDPA Trigger: GGCAGGGTCTCTTGTAGCTCAGGCTAGCTTTGATTG...CCACCACGACCGGCTGGCACTGTAATTCTTAAAACTCAGTTTCTCCCCAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCAGGAGTCATCGGACAACATGGGTCCTGATTCCTGCCCCACTGGGTGCCCTTAAGAGAGGCCTCTaGAAGTCTGATCCATTCATT | + |
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Preference number: 2 (lower is better) Translates to: SFRSHRTTWVLIPAPLGALKRGL*KSDPFI Trigger: AATGAATGGATCAGACTTCCAGAGGCCTCTCTTAAG...GGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR GCA 90 bp | TTTCAAACCTCATGCACAGCTAGGCAGGGTTACACAGCAAGAACCCGTCTCAAATACAAAGCTCTGAACTaGCTGGCCTGGGTACTGAGG | + |
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Preference number: 2 (lower is better) Translates to: FQTSCTARQGYTARTRLKYKALN*LAWVLR Trigger: CCTCAGTACCCAGGCCAGGCAGTTCAGAGCTTTGTA...TTTGAGACGGGTTCTTGCTGTGTAACCCTGCCTAGCTGTGCATGAGGTTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTCTGGGGAGAAACTGAGTTTTAAGAATTACAGTGCCAGCCGGTCGTGGTGGCCCTGGTCAAACAAATaGGGGCTTCTGGTGAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSGEKLSFKNYSASRSWWPWSNK*GLLVKE Trigger: TTCTTTCACCAGAAGCCCTCATTTGTTTGACCAGGG...CCACCACGACCGGCTGGCACTGTAATTCTTAAAACTCAGTTTCTCCCCAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CAA 90 bp | CATTACAGCGTAAAGCCCGGGTGGGTAGCAGTTCACTTAGGGCTTTaGGTTCTGTTTTCTCTTCCAGCTTCTTCAATTCTTGGCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HYSVKPGWVAVHLGL*VLFSLPASSILGSS Trigger: GGAAGAGCCAAGAATTGAAGAAGCTGGAAGAGAAAACAGAACCAAAAGCCCTAAGTGAACTGCTACCCACCCGGGCTTTACGCTGTAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR TCA 90 bp | TCTGTAATCACAGCTCCAGAGACTAAAACAGGAGATCTACAGTTTAAGGTCAGCATTCTTGGCTCTTCCTaGTGCTTGGCTATCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: SVITAPETKTGDLQFKVSILGSS*CLAILS Trigger: TGACAGGATAGCCAAGCATCAGGAAGAGCCAAGAAT...GCTGACCTTAAACTGTAGATCTCCTGTTTTAGTCTCTGGAGCTGTGATTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR-3UTR CCA 90 bp | CATGTCCAAATGACAAAGAAGGTCAGTATCCCTCTGTTACCAGTAACTACTGTGATCCATTCATTCAGGTaGGAGGGAAGAGGGATAACA | + |
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Preference number: 2 (lower is better) Translates to: HVQMTKKVSIPLLPVTTVIHSFR*EGRGIT Trigger: TGTTATCCCTCTTCCCTCCCACCTGAATGAATGGAT...CACAGTAGTTACTGGTAACAGAGGGATACTGACCTTCTTTGTCATTTGGACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CAA 90 bp | GGTCAAGGGAGTATTCACCTCATTGCCAGGGAACTAGCAAGTGCTTaGTCACCTTGCTTCTCCCTCCTTTTTAACTTTAATAGGATTTTT | + |
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Preference number: 2 (lower is better) Translates to: GQGSIHLIARELASA*SPCFSLLFNFNRIF Trigger: AAAAATCCTATTAAAGTTAAAAAGGAGGGAGAAGCAAGGTGACAAAGCACTTGCTAGTTCCCTGGCAATGAGGTGAATACTCCCTTGACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTAATCACAGCTCCAGAGACTAAAACAGGAGATCTACAGTTTAAGGTCAGCGTACAGGAAGCCATCTaGACTCTTATAAAGAGAATT | + |
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Preference number: 2 (lower is better) Translates to: SVITAPETKTGDLQFKVSVQEAI*TLIKRI Trigger: AATTCTCTTTATAAGAGTTCAGATGGCTTCCTGTAC...GCTGACCTTAAACTGTAGATCTCCTGTTTTAGTCTCTGGAGCTGTGATTACAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR GCA 72 bp | AGACAACAGCACCACCAGCCCCAGCAGTGGGCCAGCTaGCACATGACCTCGTGGAGCCCATGCAGGTGGGGC | + |
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Preference number: 3 (lower is better) Translates to: RQQHHQPQQWAS*HMTSWSPCRWG Trigger: GCCCCACCTGCATGGGCTCCACGAGGTCATGTGGCAGCTGGCCCACTGCTGGGGCTGGTGGTGCTGTTGTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| 3UTR CCA 72 bp | TCTGGACACAGACAACAGCACCACCAGCCCCAGCAGTaGGCCAGCTGCCACATGACCTCGTGGAGCCCATGC | + |
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Preference number: 3 (lower is better) Translates to: SGHRQQHHQPQQ*ASCHMTSWSPC Trigger: GCATGGGCTCCACGAGGTCATGTGGCAGCTGGCCCACTGCTGGGGCTGGTGGTGCTGTTGTCTGTGTCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| 3UTR GCA 72 bp | ACTCAGGAGGCTGAGGCAGGAGAGCCACCATCAGGCTaGCCTGGACCAGCAAGGGCCCTGTATCACAGACAA | + |
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Preference number: 3 (lower is better) Translates to: TQEAEAGEPPSG*PGPARALYHRQ Trigger: TTGTCTGTGATACAGGGCCCTTGCTGGTCCAGGGCAGCCTGATGGTGGCTCTCCTGCCTCAGCCTCCTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR GCA 72 bp | GGATCTCCCTGGAGCTGGACTTACAAAGCTCTGAACTaGCTGGCCTGGGTACTGAGGTCCACACACAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: GSPWSWTYKALN*LAWVLRSTHRS Trigger: GGACCTGTGTGTGGACCTCAGTACCCAGGCCAGGCAGTTCAGAGCTTTGTAAGTCCAGCTCCAGGGAGATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR GCA 72 bp | AGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAGTaGCAGCATTTGGATGACAGGTGTGAGTCTGCAGTA | + |
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Preference number: 3 (lower is better) Translates to: SQAGAVAHAHLQ*QHLDDRCESAV Trigger: TACTGCAGACTCACACCTGTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR TCA 72 bp | GGGAACAGTACCAAGAGTGGTCCCAAGGCTGAGTTCTaGGGTCTCTGGACACAGACAACAGCACCACCAGCC | + |
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Preference number: 3 (lower is better) Translates to: GNSTKSGPKAEF*GLWTQTTAPPA Trigger: GGCTGGTGGTGCTGTTGTCTGTGTCCAGAGACCTCAGAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| 3UTR GCA 72 bp | AGGAGCAGCAACTGTGTGTGGTCAGAGGAGCTAAAGTaGAGGGTCACCGTCAGCTCCCCGGTCCAATCAAAG | + |
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Preference number: 3 (lower is better) Translates to: RSSNCVWSEELK*RVTVSSPVQSK Trigger: CTTTGATTGGACCGGGGAGCTGACGGTGACCCTGCACTTTAGCTCCTCTGACCACACACAGTTGCTGCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CCA 72 bp | TGGAGCTGGACTTACAAAGCTCTGAACTGCCTGGCCTaGGTACTGAGGTCCACACACAGGTCCTCTGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: WSWTYKALNCLA*VLRSTHRSSAG Trigger: TCCTGCAGAGGACCTGTGTGTGGACCTCAGTACCCAGGCCAGGCAGTTCAGAGCTTTGTAAGTCCAGCTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| 3UTR GCA 72 bp | CAGTGGCAGCCACTAAAACACAGTCAAACCCCACAGTaGATCCACATCCAGCCAAAGTTCCTGAGGAGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: QWQPLKHSQTPQ*IHIQPKFLRSP Trigger: GGGGCTCCTCAGGAACTTTGGCTGGATGTGGATGCACTGTGGGGTTTGACTGTGTTTTAGTGGCTGCCACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR GCA 72 bp | GCTTGTCACACAACACAAGTGTCTCAGCATCCACCTTaGAGCACCCAGGTAAGAAAGCTGAGCCAGGCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: ACHTTQVSQHPP*STQVRKLSQAG Trigger: ACCTGCCTGGCTCAGCTTTCTTACCTGGGTGCTGCAAGGTGGATGCTGAGACACTTGTGTTGTGTGACAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR TCA 72 bp | TATTTTCTTTCAGGAGTCATCGGACAACATGGGTCCTaGTTCCTGCCCCACTGGGTGCCCACTGTAGGATGC | + |
|
Preference number: 3 (lower is better) Translates to: YFLSGVIGQHGS*FLPHWVPTVGC Trigger: GCATCCTACAGTGGGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGAAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR TCA 72 bp | GTCACCGTCAGCTCCCCGGTCCAATCAAAGCTAGCCTaGGCTACAAGAGACCCTGCCTCAACAAACAAACAA | + |
|
Preference number: 3 (lower is better) Translates to: VTVSSPVQSKLA*ATRDPASTNKQ Trigger: TTGTTTGTTTGTTGAGGCAGGGTCTCTTGTAGCTCAGGCTAGCTTTGATTGGACCGGGGAGCTGACGGTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR TCA 72 bp | AGAAACTGGGAACAGTACCAAGAGTGGTCCCAAGGCTaGGTTCTGAGGTCTCTGGACACAGACAACAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: RNWEQYQEWSQG*VLRSLDTDNST Trigger: GGTGCTGTTGTCTGTGTCCAGAGACCTCAGAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCCAGTTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
||
| 3UTR CCA 72 bp | AGAGAGGCCTCTGGAAGTCTGATCCATTCATTCAGGTaGGAGGGAAGAGGGATAACAAGCATCCAAGCCGTC | + |
|
Preference number: 3 (lower is better) Translates to: REASGSLIHSFR*EGRGITSIQAV Trigger: GACGGCTTGGATGCTTGTTATCCCTCTTCCCTCCCACCTGAATGAATGGATCAGACTTCCAGAGGCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTGGGGAGAAACTGAGTTTTAAGAATTACAGTGCCAGCCGGTCGTGGTGGGGATATGTATGTCCCTaGGCAGGTGTGTCCTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LSGEKLSFKNYSASRSWWGYVCP*AGVSFL Trigger: CAGGAAGGACACACCTGCCAAGGGACATACATATCC...CCACCACGACCGGCTGGCACTGTAATTCTTAAAACTCAGTTTCTCCCCAGACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGAGAACCAACTCCCAAAAACAGTCCTCTGACCTCCACACACACACTGTGGGAACTAGCAAGTGCTTaGTCACCTTGCTTCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RREPTPKNSPLTSTHTLWELASA*SPCFSL Trigger: GAGGGAGAAGCAAGGTGACAAAGCACTTGCTAGTTC...CCACAGTGTGTGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR-3UTR CAA 90 bp | ATATGGTGGAAGGAGAGAACCAACTCCCAAAAACAGTCCTCTGACCTCCACACAAGGAAGGAAGCCTGTTaGCTGGCTATGCATCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: IWWKERTNSQKQSSDLHTRKEAC*LAMHLQ Trigger: CTGCAGATGCATAGCCAGCAAACAGGCTTCCTTCCT...TGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCTTCCACCATAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR TCA 72 bp | GTGAAGTGTTTCAGGAGTCAGTGGACAAAGGGCACTTaGACAGTGGTGGGTTCTCATCTGTACAGGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VKCFRSQWTKGT*TVVGSHLYRKP Trigger: TGGCTTCCTGTACAGATGAGAACCCACCACTGTTCAAGTGCCCTTTGTCCACTGACTCCTGAAACACTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR CCA 72 bp | TCAGGAGTCAGTGGACAAAGGGCACTTGAACAGTGGTaGGTTCTCATCTGTACAGGAAGCCATCTGAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SGVSGQRALEQW*VLICTGSHLNS Trigger: AGAGTTCAGATGGCTTCCTGTACAGATGAGAACCCACCACTGTTCAAGTGCCCTTTGTCCACTGACTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR CCA 72 bp | ATGTTTGTTTATCCCAGTGAGCACCGTCCATCTGGGTaGCTCTTAAGAGAGGCCTCTGGAAGTCTGATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MFVYPSEHRPSG*LLREASGSLIH Trigger: ATGGATCAGACTTCCAGAGGCCTCTCTTAAGAGCCACCCAGATGGACGGTGCTCACTGGGATAAACAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR CCA 72 bp | TTTATTATTTTTAATGTGTGTGTGTGCGCGTGCGTGTaGGTACAGATGCCCGTGGGTGCCAGAAGCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: FIIFNVCVCACV*VQMPVGARSLG Trigger: TCCAAGGCTTCTGGCACCCACGGGCATCTGTACCCACACGCACGCGCACACACACACATTAAAAATAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR GCA 72 bp | AGGAAGGAAGCCTGTTTGCTGGCTATGCATCTGCAGTaGGTAAGTGTAAGGTCAAGGGAGTATTCACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: RKEACLLAMHLQ*VSVRSREYSPH Trigger: ATGAGGTGAATACTCCCTTGACCTTACACTTACGCACTGCAGATGCATAGCCAGCAAACAGGCTTCCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR CCA 72 bp | CCCAAAAACAGTCCTCTGACCTCCACACACACACTGTaGCATGTATACACATGTGGGTTCTCATGCACATGT | + |
|
Preference number: 3 (lower is better) Translates to: PKNSPLTSTHTL*HVYTCGFSCTC Trigger: ACATGTGCATGAGAACCCACATGTGTATACATGCCACAGTGTGTGTGTGGAGGTCAGAGGACTGTTTTTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR TCA 72 bp | CAAGTTCCTACAAAGGAACATGCTGCCAATCCTGTCTaGGTTCAAATTCCTAAGGCCATATGGTGGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: QVPTKEHAANPV*VQIPKAIWWKE Trigger: CTCCTTCCACCATATGGCCTTAGGAATTTGAACTCAGACAGGATTGGCAGCATGTTCCTTTGTAGGAACTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR TCA 72 bp | TTTAGCAAGAGGACTCAAAACCTGAAGTCAGAGGGCTaGGTAGAGAGCAAGTTCCTACAAAGGAACATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FSKRTQNLKSEG*VESKFLQRNML Trigger: CAGCATGTTCCTTTGTAGGAACTTGCTCTCTACTCAGCCCTCTGACTTCAGGTTTTGAGTCCTCTTGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR CCA 72 bp | ATATACACATCACACCATTACAGCGTAAAGCCCGGGTaGGTAGCAGTTCACTTAGGGCTTTTGGTTCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IYTSHHYSVKPG*VAVHLGLLVLF Trigger: AAACAGAACCAAAAGCCCTAAGTGAACTGCTACCCACCCGGGCTTTACGCTGTAATGGTGTGATGTGTATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR TCA 72 bp | AATCTACTAAATAAAGTCAATGTTTGTTTATCCCAGTaGGCACCGTCCATCTGGGTGGCTCTTAAGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: NLLNKVNVCLSQ*APSIWVALKRG Trigger: GCCTCTCTTAAGAGCCACCCAGATGGACGGTGCTCACTGGGATAAACAAACATTGACTTTATTTAGTAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR TCA 72 bp | TTAGGAACTGGTAGAACAACGAAATGGCTTAATATATaGATTAAGAGCACCTCTGAGGGCCAGATGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LGTGRTTKWLNI*IKSTSEGQMVC Trigger: ACAGACCATCTGGCCCTCAGAGGTGCTCTTAATTCATATATTAAGCCATTTCGTTGTTCTACCAGTTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR GCA 72 bp | CTCATTGCCAGGGAACTAGCAAGTGCTTTGTCACCTTaGTTCTCCCTCCTTTTTAACTTTAATAGGATTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LIARELASALSP*FSLLFNFNRIF Trigger: AAAAATCCTATTAAAGTTAAAAAGGAGGGAGAAGCAAGGTGACAAAGCACTTGCTAGTTCCCTGGCAATGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| 3UTR TCA 72 bp | TTTTCTCTTCCAGCTTCTTCAATTCTTGGCTCTTCCTaGTGCTTGGCTATCCTGTCACATAATCTACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FSLPASSILGSS*CLAILSHNLLN Trigger: ATTTAGTAGATTATGTGACAGGATAGCCAAGCATCAGGAAGAGCCAAGAATTGAAGAAGCTGGAAGAGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACATGACCTCGTGGAGCCCATGCAGGTGGGGCCCAGGTATGAGCAGTCAACCGGGACCTTCTGCTaGGGGATCGAGACCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LPHDLVEPMQVGPRYEQSTGTFC*GIETSC Trigger: ACAGGAGGTCTCGATCCCCCAGCAGAAGGTCCCGGT...TGACTGCTCATACCTGGGCCCCACCTGCATGGGCTCCACGAGGTCATGTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
||
| 3UTR CAA 72 bp | GGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTaGGATGACAGGTGTGAGTCTGCAGTAGGCCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAVAHAHLQCQH*DDRCESAVGLA Trigger: GGCCAGGCCTACTGCAGACTCACACCTGTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACACATTGCGAAGGGTCTaGGGGTGCCAGCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQAGAVAHAHLQCQHLDDTLRRV*GCQLFF Trigger: GAAGAAGAGCTGGCACCCGCAGACCCTTCGCAATGT...GTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGCACACGCACACCTTCATGTCAAGAAGGGAATTaGCGCCCGACGGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPGKKAEPGRCGGTRTPSCQEGN*RPTGQR Trigger: TCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACA...TGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAGGAGTCATCGGACAACATGGGTCCTGATTCCTGCCCCACTGGGTGCCTCTTGCTGGCATGCCTaGGGGGTGAGGAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SFRSHRTTWVLIPAPLGASCWHA*GVRSFL Trigger: CAAGAAGCTCCTCACCCCCCAGGCATGCCAGCAAGA...GGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCACATGACCTCGTGGAGCCCATGCAGGTGGGGCCCAGGTATGAGCAGTCACCTCCTCCCTCCACTTaGCATTTTCCATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPHDLVEPMQVGPRYEQSPPPST*HFPSSP Trigger: AGGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGG...TGACTGCTCATACCTGGGCCCCACCTGCATGGGCTCCACGAGGTCATGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGCTCTGAACTGCCTGGCCTGGGTACTGAGGTCCACACACAGGTCCTCCGAAGGGTCTGCGGGTaGCAGCTCTTCTTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQSSELPGLGTEVHTQVLRRVCG*QLFFRF Trigger: GAACCTGAAGAAGAGCTGGCACCCGCAGACCCTTCG...GAGGACCTGTGTGTGGACCTCAGTACCCAGGCCAGGCAGTTCAGAGCTTTGTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACTCTCGGAGCTCTCGCTaGAACTCCTCAATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQAGAVAHAHLQCQHLDDSRSSR*NSSIFF Trigger: GAAGAAGATTGAGGAGTTGCAGCGAGAGCTCCGAGA...GTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGACCAGCAAGGGCCCTGTATCACAGACAAACCACAAAGCAGCAGTGGCAGTGTCAAGAAGGGAATTaGCGCCCGACGGGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGPARALYHRQTTKQQWQCQEGN*RPTGQR Trigger: TCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACA...CTGCCACTGCTGCTTTGTGGTTTGTCTGTGATACAGGGCCCTTGCTGGTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACCAGTGTGCTTCCATATaGCCTACAGCAGGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQAGAVAHAHLQCQHLDDQCASI*PTAGIF Trigger: GAAGATGCCTGCTGTAGGCCATATGGAAGCACACTG...GTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR TCA 90 bp | AATAAAAGGACGTGGGCTGACGGAGAAGGAAGGAAGCCTGTTTGCTGGCTATGCCGACGGGGCAAAGATTaGGCCTGGGAGGAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKRTWADGEGRKPVCWLCRRGKD*AWEESC Trigger: ACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCG...GCATAGCCAGCAAACAGGCTTCCTTCCTTCTCCGTCAGCCCACGTCCTTTTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | TCTTTCAGGAGTCATCGGACAACATGGGTCCTGATTCCTGCCCCACTGGGTGCCTCCGCTTCATGCTTCTaGTCCGCCTTCCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFRSHRTTWVLIPAPLGASASCF*SAFHTF Trigger: GAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGA...GGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCTTGGATCTCCCTGGAGCTGGACTTACAAAGCTCTGAACTGCCTGGCCTGCATCACGGTTCACCATaGCACCCGGACCTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KPWISLELDLQSSELPGLHHGSP*HPDLGT Trigger: TGTACCAAGGTCCGGGTGGCATGGTGAACCGTGATG...CAGGCCAGGCAGTTCAGAGCTTTGTAAGTCCAGCTCCAGGGAGATCCAAGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | TTACAAAGCTCTGAACTGCCTGGCCTGGGTACTGAGGTCCACACACAGGTCCTCTCCGCTTCATGCTTCTaGTCCGCCTTCCACACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQSSELPGLGTEVHTQVLSASCF*SAFHTF Trigger: GAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGA...GAGGACCTGTGTGTGGACCTCAGTACCCAGGCCAGGCAGTTCAGAGCTTTGTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGATCTCCCTGGAGCTGGACTTACAAAGCTCTGAACTGCCTGGCCTGGGTAGGTCTTCCCGGATTTTaGTGGCCATGTCAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSPWSWTYKALNCLAWVGLPGF*WPCQEG Trigger: CCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACC...TACCCAGGCCAGGCAGTTCAGAGCTTTGTAAGTCCAGCTCCAGGGAGATCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | CTTGGATCTCCCTGGAGCTGGACTTACAAAGCTCTGAACTGCCTGGCCTGGGTACTGGCTTGGTGCACTTaGCAGTGTGCTTCCATATGG | + |
|
Preference number: 4 (lower is better) Translates to: LGSPWSWTYKALNCLAWVLAWCT*QCASIW Trigger: CCATATGGAAGCACACTGGCAAGTGCACCAAGCCAG...TACCCAGGCCAGGCAGTTCAGAGCTTTGTAAGTCCAGCTCCAGGGAGATCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CCA 90 bp | CAGGTGCGGTGGCACACGCACACCTTCAGTGCCAGCATTTGGATGACAGGTGTGAAACATACTTGTCAATaGGGCGCCCCAGCAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QVRWHTHTFSASIWMTGVKHTCQ*GAPAST Trigger: AGTACTTGCTGGGGCGCCCCATTGACAAGTATGTTT...CACACCTGTCATCCAAATGCTGGCACTGAAGGTGTGCGTGTGCCACCGCACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAGGAGTCATCGGACAACATGGGTCCTGATTCCTGCCCCACTGGGTGCCCTGCTGAGAGTTTTCTaGTGTACCCAGAAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SFRSHRTTWVLIPAPLGALLRVF*CTQKHA Trigger: GGCATGCTTCTGGGTACACCAGAAAACTCTCAGCAG...GGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR CAA 72 bp | TGCTTGTCACACAACACAAGTGTCTCAGCATCCACCTaGCAGCACCCAGGTAAGAAAGCTGAGCCAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLSHNTSVSAST*QHPGKKAEPGR Trigger: CCTGCCTGGCTCAGCTTTCTTACCTGGGTGCTGCAAGGTGGATGCTGAGACACTTGTGTTGTGTGACAAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGAGAACCAACTCCCAAAAACAGTCCTCTGACCTCCACACACACACTGTGGCCTAGTCTGGCTTGGTaGACTTGCCAGTGTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RREPTPKNSPLTSTHTLWPSLAW*TCQCAS Trigger: GGAAGCACACTGGCAAGTGCACCAAGCCAGACTAGG...CCACAGTGTGTGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAGGAGTCAGTGGACAAAGGGCACTTGAACAGTGGTGGGTTCTCATCTGTAACCGGGACCTTCTGCTaGGGGATCGAGACCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FQESVDKGHLNSGGFSSVTGTFC*GIETSC Trigger: ACAGGAGGTCTCGATCCCCCAGCAGAAGGTCCCGGT...TACAGATGAGAACCCACCACTGTTCAAGTGCCCTTTGTCCACTGACTCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| 3UTR CAA 72 bp | AGGATGCCGAGGAACAGAGGAGGATATGTATGTCCCTaGGCAGGTGTGTCCTTCCTGAAGCCAGTACATACC | + |
|
Preference number: 4 (lower is better) Translates to: RMPRNRGGYVCP*AGVSFLKPVHT Trigger: GGTATGTACTGGCTTCAGGAAGGACACACCTGCCAAGGGACATACATATCCTCCTCTGTTCCTCGGCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR GCA 90 bp | TCTGTAATCACAGCTCCAGAGACTAAAACAGGAGATCTACAGTTTAAGGTCAGCGGGACCGGGACCTTCTaGTGGGGGATCGAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVITAPETKTGDLQFKVSGTGTF*WGIETS Trigger: GGAGGTCTCGATCCCCCAGCAGAAGGTCCCGGTCCC...GCTGACCTTAAACTGTAGATCTCCTGTTTTAGTCTCTGGAGCTGTGATTACAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR TCA 90 bp | TACATTTGTATATACACATCACACCATTACAGCGTAAAGCCCGGGTGGGTAGCACGACGGGGCAAAGATTaGGCCTGGGAGGAGTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YICIYTSHHYSVKPGWVARRGKD*AWEESC Trigger: ACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCG...TGCTACCCACCCGGGCTTTACGCTGTAATGGTGTGATGTGTATATACAAATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR GCA 90 bp | GTCACATCAGTGTTTAACGGATGTGAAGTGTTTCAGGAGTCAGTGGACAAAGGGCGAAGGGTCTGCGGGTaGCAGCTCTTCTTCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSVFNGCEVFQESVDKGRRVCG*QLFFRF Trigger: GAACCTGAAGAAGAGCTGGCACCCGCAGACCCTTCG...CCCTTTGTCCACTGACTCCTGAAACACTTCACATCCGTTAAACACTGATGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR GCA 90 bp | CTTAAGAGAGGCCTCTGGAAGTCTGATCCATTCATTCAGGTGGGAGGGAAGAGGTCTCGGAGCTCTCGCTaGAACTCCTCAATCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKRGLWKSDPFIQVGGKRSRSSR*NSSIFF Trigger: GAAGAAGATTGAGGAGTTGCAGCGAGAGCTCCGAGA...CCTCTTCCCTCCCACCTGAATGAATGGATCAGACTTCCAGAGGCCTCTCTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CCA 90 bp | TCTGTAATCACAGCTCCAGAGACTAAAACAGGAGATCTACAGTTTAAGGTCAGCAGGTATGCGGTTTGCTaGGCCTTGGGGACCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SVITAPETKTGDLQFKVSRYAVC*ALGTGT Trigger: GGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCT...GCTGACCTTAAACTGTAGATCTCCTGTTTTAGTCTCTGGAGCTGTGATTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CCA 90 bp | GCCAGGGAACTAGCAAGTGCTTTGTCACCTTGCTTCTCCCTCCTTTTTAACTTTGAAAAACGCCAGACCTaGAAGAGTCCCCAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARELASALSPCFSLLFNFEKRQT*KSPQAS Trigger: GGAGGCCTGGGGACTCTTCCAGGTCTGGCGTTTTTC...AAAGTTAAAAAGGAGGGAGAAGCAAGGTGACAAAGCACTTGCTAGTTCCCTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS-3UTR GCA 90 bp | GTCACATCAGTGTTTAACGGATGTGAAGTGTTTCAGGAGTCAGTGGACAAAGGGACACTTTCTCCACATTaGGAAGGGTCTGCGGGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTSVFNGCEVFQESVDKGTLSPH*EGSAGA Trigger: GGCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGT...CCCTTTGTCCACTGACTCCTGAAACACTTCACATCCGTTAAACACTGATGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | TTGTCTGGGGAGAAACTGAGTTTTAAGAATTACAGTGCCAGCCGGTCGTGGTGGTTTACCTTAGAGGTATaGGGTTTGCTGGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGEKLSFKNYSASRSWWFTLEV*GLLGLG Trigger: CCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAA...CCACCACGACCGGCTGGCACTGTAATTCTTAAAACTCAGTTTCTCCCCAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | TTTCAAACCTCATGCACAGCTAGGCAGGGTTACACAGCAAGAACCCGTCTCAAAGTGCACTTGCCAGTGTaGTTCCATATGGCCTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQTSCTARQGYTARTRLKVHLPV*FHMAYS Trigger: GCTGTAGGCCATATGGAAGCACACTGGCAAGTGCAC...TTTGAGACGGGTTCTTGCTGTGTAACCCTGCCTAGCTGTGCATGAGGTTTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS-3UTR CCA 90 bp | AAATTAGCCAGAAAGCAAAAAGCTTCCCAAGTATTTTCTTTCAGGAGTCATCGGGCTCATCCTCGCTGCTaGAGCCACCGCTGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLARKQKASQVFSFRSHRAHPRC*SHRCWS Trigger: GCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGC...CCGATGACTCCTGAAAGAAAATACTTGGGAAGCTTTTTGCTTTCTGGCTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CAA 72 bp | TGTGAAGTGTTTCAGGAGTCAGTGGACAAAGGGCACTaGAACAGTGGTGGGTTCTCATCTGTACAGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CEVFQESVDKGH*NSGGFSSVQEA Trigger: GGCTTCCTGTACAGATGAGAACCCACCACTGTTCAAGTGCCCTTTGTCCACTGACTCCTGAAACACTTCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR TCA 90 bp | ATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTCCCAAGGCTGAGTTCGGCCTCCTTCTTAGGTaGTGGGCTGTCTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: IIWLETGNSTKSGPKAEFGLLLR*WAVSLF Trigger: AAAGAGAGAGACAGCCCATCACCTAAGAAGGAGGCC...GAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR GCA 90 bp | TCAAGTAAAAATGCTATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTGGGACCGGGACCTTCTaGTGGGGGATCGAGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKNAIIWLETGNSTKSGGTGTF*WGIETS Trigger: GGAGGTCTCGATCCCCCAGCAGAAGGTCCCGGTCCC...ACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAATAGCATTTTTACTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR GCA 90 bp | CATGTCCAAATGACAAAGAAGGTCAGTATCCCTCTGTTACCAGTAACTACTGTGACATTGCGAAGGGTCTaGGGGTGCCAGCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HVQMTKKVSIPLLPVTTVTLRRV*GCQLFF Trigger: GAAGAAGAGCTGGCACCCGCAGACCCTTCGCAATGT...CACAGTAGTTACTGGTAACAGAGGGATACTGACCTTCTTTGTCATTTGGACATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | TCTGTAATCACAGCTCCAGAGACTAAAACAGGAGATCTACAGTTTAAGGTCAGCCATCACGGTTCACCATaGCACCCGGACCTTGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SVITAPETKTGDLQFKVSHHGSP*HPDLGT Trigger: TGTACCAAGGTCCGGGTGGCATGGTGAACCGTGATG...GCTGACCTTAAACTGTAGATCTCCTGTTTTAGTCTCTGGAGCTGTGATTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | TTGTCTGGGGAGAAACTGAGTTTTAAGAATTACAGTGCCAGCCGGTCGTGGTGGGAGCTTCTGTGTTTGTaGTTCCTGTGCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSGEKLSFKNYSASRSWWELLCL*FLCFFF Trigger: GAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTC...CCACCACGACCGGCTGGCACTGTAATTCTTAAAACTCAGTTTCTCCCCAGACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CCA 90 bp | TTTCAGGAGTCAGTGGACAAAGGGCACTTGAACAGTGGTGGGTTCTCATCTGTAAAACATACTTGTCAATaGGGCGCCCCAGCAAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: FQESVDKGHLNSGGFSSVKHTCQ*GAPAST Trigger: AGTACTTGCTGGGGCGCCCCATTGACAAGTATGTTT...TACAGATGAGAACCCACCACTGTTCAAGTGCCCTTTGTCCACTGACTCCTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CCA 90 bp | TCAAGTAAAAATGCTATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTAGGTATGCGGTTTGCTaGGCCTTGGGGACCGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSKNAIIWLETGNSTKSGRYAVC*ALGTGT Trigger: GGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCT...ACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAATAGCATTTTTACTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CCA 90 bp | ATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTCCCAAGGCTGAGTTCCTGCTGAGAGTTTTCTaGTGTACCCAGAAGCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: IIWLETGNSTKSGPKAEFLLRVF*CTQKHA Trigger: GGCATGCTTCTGGGTACACCAGAAAACTCTCAGCAG...GAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR GCA 90 bp | CATGTCCAAATGACAAAGAAGGTCAGTATCCCTCTGTTACCAGTAACTACTGTGGGTCTTCCCGGATTTTaGTGGCCATGTCAAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HVQMTKKVSIPLLPVTTVGLPGF*WPCQEG Trigger: CCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACC...CACAGTAGTTACTGGTAACAGAGGGATACTGACCTTCTTTGTCATTTGGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | ATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTCCCAAGGCTGAGTTCTTTTCCATCATCTCCTaGCGTTTCCGCTCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IIWLETGNSTKSGPKAEFFSIIS*RFRSSS Trigger: GGAACTAGAGCGGAAACGGCAGGAGATGATGGAAAA...GAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CCA 90 bp | GTCACATCAGTGTTTAACGGATGTGAAGTGTTTCAGGAGTCAGTGGACAAAGGGCTTCCCGGATTTTGCTaGCCATGTCAAGAAGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VTSVFNGCEVFQESVDKGLPGFC*PCQEGN Trigger: ATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAG...CCCTTTGTCCACTGACTCCTGAAACACTTCACATCCGTTAAACACTGATGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CCA 90 bp | ACCAGTAACTACTGTGTTACTTTTCTGACAAGGTCATCCAACAAAATGTTCTCCTGGAGCCACCGCTGCTaGAGCTTCTGTGTTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSNYCVTFLTRSSNKMFSWSHRC*SFCVCA Trigger: AGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCA...GGAGAACATTTTGTTGGATGACCTTGTCAGAAAAGTAACACAGTAGTTACTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CCA 90 bp | TCAAGTAAAAATGCTATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTTCTTGCTGGCATGCCTaGGGGGTGAGGAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKNAIIWLETGNSTKSGSCWHA*GVRSFL Trigger: CAAGAAGCTCCTCACCCCCCAGGCATGCCAGCAAGA...ACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAATAGCATTTTTACTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CCA 90 bp | AAATTAGCCAGAAAGCAAAAAGCTTCCCAAGTATTTTCTTTCAGGAGTCATCGGGGGGCCTCTCTTCCTTaGTGCTCTTCTTGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLARKQKASQVFSFRSHRGASLP*CSSCWH Trigger: ATGCCAGCAAGAAGAGCACCAAGGAAGAGAGGCCCC...CCGATGACTCCTGAAAGAAAATACTTGGGAAGCTTTTTGCTTTCTGGCTAATTT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR TCA 90 bp | AAATTAGCCAGAAAGCAAAAAGCTTCCCAAGTATTTTCTTTCAGGAGTCATCGGGGCCTCCTTCTTAGGTaGTGGGCTGTCTCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KLARKQKASQVFSFRSHRGLLLR*WAVSLF Trigger: AAAGAGAGAGACAGCCCATCACCTAAGAAGGAGGCC...CCGATGACTCCTGAAAGAAAATACTTGGGAAGCTTTTTGCTTTCTGGCTAATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | GTTACCAGTAACTACTGTGTTACTTTTCTGACAAGGTCATCCAACAAAATGTTCTGCTGGAGCCACCGCTaGTGGAGCTTCTGTGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VTSNYCVTFLTRSSNKMFCWSHR*WSFCVC Trigger: ACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCA...GAACATTTTGTTGGATGACCTTGTCAGAAAAGTAACACAGTAGTTACTGGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | CATGTCCAAATGACAAAGAAGGTCAGTATCCCTCTGTTACCAGTAACTACTGTGTTTTCCATCATCTCCTaGCGTTTCCGCTCTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVQMTKKVSIPLLPVTTVFSIIS*RFRSSS Trigger: GGAACTAGAGCGGAAACGGCAGGAGATGATGGAAAA...CACAGTAGTTACTGGTAACAGAGGGATACTGACCTTCTTTGTCATTTGGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CCA 90 bp | TCAAGTAAAAATGCTATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTGGGGCCTCTCTTCCTTaGTGCTCTTCTTGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSKNAIIWLETGNSTKSGGASLP*CSSCWH Trigger: ATGCCAGCAAGAAGAGCACCAAGGAAGAGAGGCCCC...ACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAATAGCATTTTTACTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CCA 90 bp | AAATTAGCCAGAAAGCAAAAAGCTTCCCAAGTATTTTCTTTCAGGAGTCATCGGCCTCCTCCCTCCACTTaGCATTTTCCATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLARKQKASQVFSFRSHRPPPST*HFPSSP Trigger: AGGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGG...CCGATGACTCCTGAAAGAAAATACTTGGGAAGCTTTTTGCTTTCTGGCTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR GCA 90 bp | TCAAGTAAAAATGCTATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTTTTACCTTAGAGGTATaGGGTTTGCTGGGCCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKNAIIWLETGNSTKSGFTLEV*GLLGLG Trigger: CCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAA...ACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAATAGCATTTTTACTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CCA 90 bp | TACATTTGTATATACACATCACACCATTACAGCGTAAAGCCCGGGTGGGTAGCACATATCCAGGGACTTTaGACAAAACAGGAAAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YICIYTSHHYSVKPGWVAHIQGL*TKQERN Trigger: ATTCCTTTCCTGTTTTGTCCAAAGTCCCTGGATATG...TGCTACCCACCCGGGCTTTACGCTGTAATGGTGTGATGTGTATATACAAATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| 3UTR CAA 72 bp | AGTATTCACCTCATTGCCAGGGAACTAGCAAGTGCTTaGTCACCTTGCTTCTCCCTCCTTTTTAACTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIHLIARELASA*SPCFSLLFNFN Trigger: ATTAAAGTTAAAAAGGAGGGAGAAGCAAGGTGACAAAGCACTTGCTAGTTCCCTGGCAATGAGGTGAATACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS-3UTR GCA 90 bp | ACCAGTAACTACTGTGTTACTTTTCTGACAAGGTCATCCAACAAAATGTTCTCCAACAGGAAAGGAATTTaGCATCTTCTTTTGAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: TSNYCVTFLTRSSNKMFSNRKGI*HLLLRP Trigger: CGGTCTCAAAAGAAGATGGCAAATTCCTTTCCTGTT...GGAGAACATTTTGTTGGATGACCTTGTCAGAAAAGTAACACAGTAGTTACTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 90 bp | GAGTCCAACCTCTCCAGCCTGTGCTCCCGCTCGTCCTCCCTGGCGTaGCTCTTGAGGGTGTTGAGCCTCTCCTCCTCCCTCCACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ESNLSSLCSRSSSLA*LLRVLSLSSSLHLA Trigger: TGCCAAGTGGAGGGAGGAGGAGAGGCTCAACACCCTCAAGAGGCACGCCAGGGAGGACGAGCGGGAGCACAGGCTGGAGAGGTTGGACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS GCA 90 bp | GGGAGGAGGTCGACGCACTCTCCAGCTTCATGCGGTGGAGGAACTTaGCGGACCGAGAGTCCAACCTCTCCAGCCTGTGCTCCCGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GRRSTHSPASCGGGT*RTESPTSPACAPAR Trigger: ACGAGCGGGAGCACAGGCTGGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGACCTCCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 90 bp | TCACGCGGTCCTCCAGGGAGGAGGTCGACGCACTCTCCAGCTTCATaGGGTGGAGGAACTTGCCGGACCGAGAGTCCAACCTCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRGPPGRRSTHSPAS*GGGTCRTESPTSPA Trigger: GGCTGGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGACCTCCTCCCTGGAGGACCGCGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CCA 90 bp | CGGTCCTCCAGGGAGGAGGTCGACGCACTCTCCAGCTTCATGCGGTaGAGGAACTTGCCGGACCGAGAGTCCAACCTCTCCAGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RSSREEVDALSSFMR*RNLPDRESNLSSLC Trigger: GCACAGGCTGGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGACCTCCTCCCTGGAGGACCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 90 bp | AGTTCTTCTCCAGGGCCACCGACGTCCGCTGTAGGGAATGGATGTTaGGCTTCACGCGGTCCTCCAGGGAGGAGGTCGACGCACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSPGPPTSAVGNGC*ASRGPPGRRSTHSP Trigger: TGGAGAGTGCGTCGACCTCCTCCCTGGAGGACCGCGTGAAGCGCAACATCCATTCCCTACAGCGGACGTCGGTGGCCCTGGAGAAGAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CAA 90 bp | CTGCCACATGACCTCGTGGAGCCCATGCAGGTGGGGCCCAGGTATGAGCAGTCATTAGAGGTATGCGGTTaGCTGGGCCTTGGGGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPHDLVEPMQVGPRYEQSLEVCG*LGLGDR Trigger: CCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAA...TGACTGCTCATACCTGGGCCCCACCTGCATGGGCTCCACGAGGTCATGTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS CCA 90 bp | CTCATGAAGTTCTTCTCCAGGGCCACCGACGTCCGCTGTAGGGAATaGATGTTGCGCTTCACGCGGTCCTCCAGGGAGGAGGTCGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LMKFFSRATDVRCRE*MLRFTRSSREEVDA Trigger: TGCGTCGACCTCCTCCCTGGAGGACCGCGTGAAGCGCAACATCCATTCCCTACAGCGGACGTCGGTGGCCCTGGAGAAGAACTTCATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS TCA 90 bp | GCTGGCCATGTCAAGAAGGGAATTGGCGCCCGACGGGGCAAAGATTaGGCCTGGGAGGAGTCCTGTCTCAGAAGAGCAGCCAGCTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGHVKKGIGARRGKD*AWEESCLRRAASFP Trigger: AGGGAAGCTGGCTGCTCTTCTGAGACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS-3UTR CAA 90 bp | CACCCAGGTAAGAAAGCTGAGCCAGGCAGGTGCGGTGGCACACGCACACCTTCAATGTCAAGAAGGGAATaGGCGCCCGACGGGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HPGKKAEPGRCGGTRTPSMSRRE*APDGAK Trigger: CTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACAT...TGAAGGTGTGCGTGTGCCACCGCACCTGCCTGGCTCAGCTTTCTTACCTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS GCA 90 bp | GAGACCGGGCCTGGCTCTGCTCATCCTCGCTGCTGGAGCCACCGCTaGTGGAGCTTCTGTGTTTGTGCTTCCTGTGCTTCTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ETGPGSAHPRCWSHR*WSFCVCASCASSSS Trigger: AGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGGCCCGGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CCA 90 bp | ACCGGGCCTGGCTCTGCTCATCCTCGCTGCTGGAGCCACCGCTGCTaGAGCTTCTGTGTTTGTGCTTCCTGTGCTTCTTCTTCTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TGPGSAHPRCWSHRC*SFCVCASCASSSSP Trigger: AGGAGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGGCCCGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CCA 90 bp | CCATCTTCTTTTGAGACCGGGCCTGGCTCTGCTCATCCTCGCTGCTaGAGCCACCGCTGCTGGAGCTTCTGTGTTTGTGCTTCCTGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSSFETGPGSAHPRC*SHRCWSFCVCASCA Trigger: AGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGGCCCGGTCTCAAAAGAAGATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CCA 90 bp | TGTCCCGGGGCCTCTCTTCCTTGGTGCTCTTCTTGCTGGCATGCCTaGGGGGTGAGGAGCTTCTTGACCGGGAATTGTTCTTTATCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CPGASLPWCSSCWHA*GVRSFLTGNCSLSP Trigger: GGGCGATAAAGAACAATTCCCGGTCAAGAAGCTCCTCACCCCCCAGGCATGCCAGCAAGAAGAGCACCAAGGAAGAGAGGCCCCGGGACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CCA 90 bp | TCTCTCTTTCCTGTTTACCTTAGAGGTATGCGGTTTGCTGGGCCTTaGGGACCGGGACCTTCTGCTGGGGGATCGAGACCTCCTGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLFPVYLRGMRFAGP*GPGPSAGGSRPPVP Trigger: CGGGACAGGAGGTCTCGATCCCCCAGCAGAAGGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAACAGGAAAGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS CCA 90 bp | AGAGAGGGTCTTCCCGGATTTTGCTGGCCATGTCAAGAAGGGAATTaGCGCCCGACGGGGCAAAGATTGAGCCTGGGAGGAGTCCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: REGLPGFCWPCQEGN*RPTGQRLSLGGVLS Trigger: AGACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACCCTCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS CCA 90 bp | TGTCCCGGGGCCTCTCTTCCTTGGTGCTCTTCTTGCTGGCATGCCTaGGGGGTGAGGAGCTTCTTGACCGGGAATTGTTCTTTATCGCCN | + |
|
Preference number: 5 (lower is better) Translates to: CPGASLPWCSSCWHA*GVRSFLTGNCSLSP Trigger: NGGCGATAAAGAACAATTCCCGGTCAAGAAGCTCCTCACCCCCCAGGCATGCCAGCAAGAAGAGCACCAAGGAAGAGAGGCCCCGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CAA 90 bp | CTGCCACATGACCTCGTGGAGCCCATGCAGGTGGGGCCCAGGTATGAGCAGTCAGGGGTGAGGAGCTTCTaGACCGGGAATTGTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LPHDLVEPMQVGPRYEQSGVRSF*TGNCSL Trigger: TAAAGAACAATTCCCGGTCAAGAAGCTCCTCACCCC...TGACTGCTCATACCTGGGCCCCACCTGCATGGGCTCCACGAGGTCATGTGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
||
| CDS GCA 90 bp | TCTCCGCTTCATGCTTCTGCTCCGCCTTCCACACTTTCTCCACATTaGGAAGGGTCTGCGGGTGCCAGCTCTTCTTCAGGTTCAGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLHASAPPSTLSPH*EGSAGASSSSGSGL Trigger: GAGACCTGAACCTGAAGAAGAGCTGGCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS-3UTR CAA 90 bp | AGAGCAGCACACGGCCATAAGCCTAGCATGCTGGAGGCAGTGACAGGAGGATCCTCTGGCTTGGTGCACTaGCCAGTGTGCTTCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: RAAHGHKPSMLEAVTGGSSGLVH*PVCFHM Trigger: CATATGGAAGCACACTGGCAAGTGCACCAAGCCAGA...GGATCCTCCTGTCACTGCCTCCAGCATGCTAGGCTTATGGCCGTGTGCTGCTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS TCA 90 bp | CCAGGGACTTTGGACAAAACAGGAAAGGAATTTGCCATCTTCTTTTaGGACCGGGCCTGGCTCTGCTCATCCTCGCTGCTGGAGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PGTLDKTGKEFAIFF*DRAWLCSSSLLEPP Trigger: CGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGGCCCGGTCTCAAAAGAAGATGGCAAATTCCTTTCCTGTTTTGTCCAAAGTCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS GCA 90 bp | TCTCGCTGCAACTCCTCAATCTTCTTCCTCTCCGCTTCATGCTTCTaGTCCGCCTTCCACACTTTCTCCACATTGCGAAGGGTCTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRCNSSIFFLSASCF*SAFHTFSTLRRVCG Trigger: CCCGCAGACCCTTCGCAATGTGGAGAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGAGAGGAAGAAGATTGAGGAGTTGCAGCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS GCA 90 bp | CGGAGCTCTCGCTGCAACTCCTCAATCTTCTTCCTCTCCGCTTCATaGTTCTGCTCCGCCTTCCACACTTTCTCCACATTGCGAAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSRCNSSIFFLSAS*FCSAFHTFSTLRRV Trigger: GACCCTTCGCAATGTGGAGAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGAGAGGAAGAAGATTGAGGAGTTGCAGCGAGAGCTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS GCA 90 bp | TTAGGTGATGGGCTGTCTCTCTCTTTCCTGTTTACCTTAGAGGTATaGGGTTTGCTGGGCCTTGGGGACCGGGACCTTCTGCTGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGDGLSLSFLFTLEV*GLLGLGDRDLLLGD Trigger: ATCCCCCAGCAGAAGGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAACAGGAAAGAGAGAGACAGCCCATCACCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
||
| CDS TCA 90 bp | GGTGTACCCAGAAGCATGCCGCCTCTGGTAGGCCTCCTTCTTAGGTaGTGGGCTGTCTCTCTCTTTCCTGTTTACCTTAGAGGTATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVPRSMPPLVGLLLR*WAVSLFPVYLRGMR Trigger: CCGCATACCTCTAAGGTAAACAGGAAAGAGAGAGACAGCCCATCACCTAAGAAGGAGGCCTACCAGAGGCGGCATGCTTCTGGGTACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAGAGGCCTCTGGAAGTCTGATCCATTCATTCAGGTGGGAGGGAAGAGGCACACTTTCTCCACATaGCGAAGGGTCTGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKRGLWKSDPFIQVGGKRHTFST*RRVCGC Trigger: GCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGTG...CCTCTTCCCTCCCACCTGAATGAATGGATCAGACTTCCAGAGGCCTCTCTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGGGGAGAAACTGAGTTTTAAGAATTACAGTGCCAGCCGGTCGTGGTGGCGGGGCCTCTCTTCCTaGGTGCTCTTCTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSGEKLSFKNYSASRSWWRGLSS*VLFLLA Trigger: TGCCAGCAAGAAGAGCACCAAGGAAGAGAGGCCCCG...CCACCACGACCGGCTGGCACTGTAATTCTTAAAACTCAGTTTCTCCCCAGACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS GCA 90 bp | TCATCCTCGCTGCTGGAGCCACCGCTGCTGGAGCTTCTGTGTTTGTaGTTCCTGTGCTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLLEPPLLELLCL*FLCFFFFSFFFFFS Trigger: GGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS GCA 90 bp | TTGAGCCTCTCCTCCTCCCTCCACTTGGCATTTTCCATCATCTCCTaGCGTTTCCGCTCTAGTTCCTCTGCTGAGAGTTTTCTGGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLSSSLHLAFSIIS*RFRSSSSAESFLVY Trigger: GTACACCAGAAAACTCTCAGCAGAGGAACTAGAGCGGAAACGGCAGGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGGAGAGGCTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
||
| CDS CCA 90 bp | GATAAACCTAGTCTGGCTTGGTGCACTTGCCAGTGTGCTTCCATATaGCCTACAGCAGGCATCTTCACAGGCTTTCTCTCCACACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DKPSLAWCTCQCASI*PTAGIFTGFLSTPR Trigger: TCTGGGTGTGGAGAGAAAGCCTGTGAAGATGCCTGCTGTAGGCCATATGGAAGCACACTGGCAAGTGCACCAAGCCAGACTAGGTTTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS-3UTR CAA 90 bp | ATATGGTGGAAGGAGAGAACCAACTCCCAAAAACAGTCCTCTGACCTCCACACACACACTTTCTCCACATaGCGAAGGGTCTGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWWKERTNSQKQSSDLHTHTFST*RRVCGC Trigger: GCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGTG...TGTGTGGAGGTCAGAGGACTGTTTTTGGGAGTTGGTTCTCTCCTTCCACCATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
||
| CDS-3UTR CAA 90 bp | TCTTTCAGGAGTCATCGGACAACATGGGTCCTGATTCCTGCCCCACTGGGTGCCCCATATCCAGGGACTTaGGACAAAACAGGAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SFRSHRTTWVLIPAPLGAPYPGT*DKTGKE Trigger: TTCCTTTCCTGTTTTGTCCAAAGTCCCTGGATATGG...GGCACCCAGTGGGGCAGGAATCAGGACCCATGTTGTCCGATGACTCCTGAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CAA 90 bp | GTCACATCAGTGTTTAACGGATGTGAAGTGTTTCAGGAGTCAGTGGACAAAGGGTTAGAGGTATGCGGTTaGCTGGGCCTTGGGGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: VTSVFNGCEVFQESVDKGLEVCG*LGLGDR Trigger: CCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAA...CCCTTTGTCCACTGACTCCTGAAACACTTCACATCCGTTAAACACTGATGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGAGTCAGTGGACAAAGGGCACTTGAACAGTGGTGGGTTCTCATCTGTAGGGTCTTCCCGGATTTaGCTGGCCATGTCAAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FQESVDKGHLNSGGFSSVGSSRI*LAMSRR Trigger: CCTTCTTGACATGGCCAGCAAAATCCGGGAAGACCC...TACAGATGAGAACCCACCACTGTTCAAGTGCCCTTTGTCCACTGACTCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS GCA 90 bp | CTGCTGGAGCCACCGCTGCTGGAGCTTCTGTGTTTGTGCTTCCTGTaGTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTCCTTTTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLEPPLLELLCLCFL*FFFFSFFFFFSFFS Trigger: TGAGAAAAAGGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CAA 90 bp | ATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTCCCAAGGCTGAGTTCTCCTCCTCCCTCCACTaGGCATTTTCCATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IIWLETGNSTKSGPKAEFSSSLH*AFSIIS Trigger: GGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGGA...GAACTCAGCCTTGGGACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CAA 90 bp | TCAAGTAAAAATGCTATTATCTGGTTAGAAACTGGGAACAGTACCAAGAGTGGTCGGGGCCTCTCTTCCTaGGTGCTCTTCTTGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSKNAIIWLETGNSTKSGRGLSS*VLFLLA Trigger: TGCCAGCAAGAAGAGCACCAAGGAAGAGAGGCCCCG...ACCACTCTTGGTACTGTTCCCAGTTTCTAACCAGATAATAGCATTTTTACTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152395.2 |
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| CDS-3UTR CAA 90 bp | GTTACCAGTAACTACTGTGTTACTTTTCTGACAAGGTCATCCAACAAAATGTTCATGTCAAGAAGGGAATaGGCGCCCGACGGGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTSNYCVTFLTRSSNKMFMSRRE*APDGAK Trigger: CTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACAT...GAACATTTTGTTGGATGACCTTGTCAGAAAAGTAACACAGTAGTTACTGGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CAA 90 bp | CTTAAGAGAGGCCTCTGGAAGTCTGATCCATTCATTCAGGTGGGAGGGAAGAGGTTTCTCAAGGCTCATTaGCAACAGCTCTTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKRGLWKSDPFIQVGGKRFLKAH*QQLFDF Trigger: AAAATCAAAGAGCTGTTGCAAATGAGCCTTGAGAAA...CCTCTTCCCTCCCACCTGAATGAATGGATCAGACTTCCAGAGGCCTCTCTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CAA 90 bp | AAATTAGCCAGAAAGCAAAAAGCTTCCCAAGTATTTTCTTTCAGGAGTCATCGGCTGGAGCTTCTGTGTTaGTGCTTCCTGTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KLARKQKASQVFSFRSHRLELLC*CFLCFF Trigger: GAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAG...CCGATGACTCCTGAAAGAAAATACTTGGGAAGCTTTTTGCTTTCTGGCTAATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS-3UTR CAA 90 bp | AAATTAGCCAGAAAGCAAAAAGCTTCCCAAGTATTTTCTTTCAGGAGTCATCGGGGGGTGAGGAGCTTCTaGACCGGGAATTGTTCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KLARKQKASQVFSFRSHRGVRSF*TGNCSL Trigger: TAAAGAACAATTCCCGGTCAAGAAGCTCCTCACCCC...CCGATGACTCCTGAAAGAAAATACTTGGGAAGCTTTTTGCTTTCTGGCTAATTT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CAA 90 bp | GTTACCAGTAACTACTGTGTTACTTTTCTGACAAGGTCATCCAACAAAATGTTCTCCTCCTCCCTCCACTaGGCATTTTCCATCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VTSNYCVTFLTRSSNKMFSSSLH*AFSIIS Trigger: GGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGGA...GAACATTTTGTTGGATGACCTTGTCAGAAAAGTAACACAGTAGTTACTGGTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS-3UTR CAA 90 bp | GTTACCAGTAACTACTGTGTTACTTTTCTGACAAGGTCATCCAACAAAATGTTCAAACAGGAAAGGAATTaGCCATCTTCTTTTGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: VTSNYCVTFLTRSSNKMFKQERN*PSSFET Trigger: GGTCTCAAAAGAAGATGGCAAATTCCTTTCCTGTTT...GAACATTTTGTTGGATGACCTTGTCAGAAAAGTAACACAGTAGTTACTGGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 72 bp | CTCTCCAGCCTGTGCTCCCGCTCGTCCTCCCTGGCGTaGCTCTTGAGGGTGTTGAGCCTCTCCTCCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSSLCSRSSSLA*LLRVLSLSSSL Trigger: GAGGGAGGAGGAGAGGCTCAACACCCTCAAGAGGCACGCCAGGGAGGACGAGCGGGAGCACAGGCTGGAGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS GCA 72 bp | CCAGGGCCACCGACGTCCGCTGTAGGGAATGGATGTTaGGCTTCACGCGGTCCTCCAGGGAGGAGGTCGACG | + |
|
Preference number: 6 (lower is better) Translates to: PGPPTSAVGNGC*ASRGPPGRRST Trigger: CGTCGACCTCCTCCCTGGAGGACCGCGTGAAGCGCAACATCCATTCCCTACAGCGGACGTCGGTGGCCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CAA 72 bp | AGCCTGTGCTCCCGCTCGTCCTCCCTGGCGTGCCTCTaGAGGGTGTTGAGCCTCTCCTCCTCCCTCCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SLCSRSSSLACL*RVLSLSSSLHL Trigger: CAAGTGGAGGGAGGAGGAGAGGCTCAACACCCTCAAGAGGCACGCCAGGGAGGACGAGCGGGAGCACAGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS CAA 72 bp | TCCAGGGCCACCGACGTCCGCTGTAGGGAATGGATGTaGCGCTTCACGCGGTCCTCCAGGGAGGAGGTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRATDVRCREWM*RFTRSSREEVD Trigger: GTCGACCTCCTCCCTGGAGGACCGCGTGAAGCGCAACATCCATTCCCTACAGCGGACGTCGGTGGCCCTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CAA 90 bp | AGGGAGGAGGTCGACGCACTCTCCAGCTTCATGCGGTGGAGGAACTaGCCGGACCGAGAGTCCAACCTCTCCAGCCTGTGCTCCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: REEVDALSSFMRWRN*PDRESNLSSLCSRS Trigger: CGAGCGGGAGCACAGGCTGGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGACCTCCTCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 72 bp | CCTCCAGGGAGGAGGTCGACGCACTCTCCAGCTTCATaGGGTGGAGGAACTTGCCGGACCGAGAGTCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: PPGRRSTHSPAS*GGGTCRTESPT Trigger: GGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGACCTCCTCCCTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CAA 90 bp | AACCTCTCCAGCCTGTGCTCCCGCTCGTCCTCCCTGGCGTGCCTCTaGAGGGTGTTGAGCCTCTCCTCCTCCCTCCACTTGGCATTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: NLSSLCSRSSSLACL*RVLSLSSSLHLAFS Trigger: GGAAAATGCCAAGTGGAGGGAGGAGGAGAGGCTCAACACCCTCAAGAGGCACGCCAGGGAGGACGAGCGGGAGCACAGGCTGGAGAGGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS CAA 90 bp | AAGTTCTTCTCCAGGGCCACCGACGTCCGCTGTAGGGAATGGATGTaGCGCTTCACGCGGTCCTCCAGGGAGGAGGTCGACGCACTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KFFSRATDVRCREWM*RFTRSSREEVDALS Trigger: GGAGAGTGCGTCGACCTCCTCCCTGGAGGACCGCGTGAAGCGCAACATCCATTCCCTACAGCGGACGTCGGTGGCCCTGGAGAAGAACTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CCA 72 bp | AGGGAGGAGGTCGACGCACTCTCCAGCTTCATGCGGTaGAGGAACTTGCCGGACCGAGAGTCCAACCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: REEVDALSSFMR*RNLPDRESNLS Trigger: GGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGACCTCCTCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS CCA 72 bp | TTCTTCTCCAGGGCCACCGACGTCCGCTGTAGGGAATaGATGTTGCGCTTCACGCGGTCCTCCAGGGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FFSRATDVRCRE*MLRFTRSSREE Trigger: CTCCTCCCTGGAGGACCGCGTGAAGCGCAACATCCATTCCCTACAGCGGACGTCGGTGGCCCTGGAGAAGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS CAA 72 bp | GTCGACGCACTCTCCAGCTTCATGCGGTGGAGGAACTaGCCGGACCGAGAGTCCAACCTCTCCAGCCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VDALSSFMRWRN*PDRESNLSSLC Trigger: GCACAGGCTGGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS GCA 72 bp | TCGACGCACTCTCCAGCTTCATGCGGTGGAGGAACTTaGCGGACCGAGAGTCCAACCTCTCCAGCCTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: STHSPASCGGGT*RTESPTSPACA Trigger: AGCACAGGCTGGAGAGGTTGGACTCTCGGTCCGGCAAGTTCCTCCACCGCATGAAGCTGGAGAGTGCGTCGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS CCA 72 bp | TTTGAGACCGGGCCTGGCTCTGCTCATCCTCGCTGCTaGAGCCACCGCTGCTGGAGCTTCTGTGTTTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FETGPGSAHPRC*SHRCWSFCVCA Trigger: AGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGGCCCGGTCTCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS CAA 90 bp | TGCTGGCCATGTCAAGAAGGGAATTGGCGCCCGACGGGGCAAAGATaGAGCCTGGGAGGAGTCCTGTCTCAGAAGAGCAGCCAGCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: CWPCQEGNWRPTGQR*SLGGVLSQKSSQLP Trigger: GGGAAGCTGGCTGCTCTTCTGAGACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS GCA 72 bp | CCTGGCTCTGCTCATCCTCGCTGCTGGAGCCACCGCTaGTGGAGCTTCTGTGTTTGTGCTTCCTGTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSAHPRCWSHR*WSFCVCASCAS Trigger: AGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS GCA 72 bp | TCTTTTGAGACCGGGCCTGGCTCTGCTCATCCTCGCTaGTGGAGCCACCGCTGCTGGAGCTTCTGTGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SFETGPGSAHPR*WSHRCWSFCVC Trigger: ACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCCAGGCCCGGTCTCAAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
||
| CDS CCA 72 bp | CCTGTTTACCTTAGAGGTATGCGGTTTGCTGGGCCTTaGGGACCGGGACCTTCTGCTGGGGGATCGAGACCT | + |
|
Preference number: 6 (lower is better) Translates to: PVYLRGMRFAGP*GPGPSAGGSRP Trigger: AGGTCTCGATCCCCCAGCAGAAGGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
||
| CDS CAA 90 bp | AAGAGAGGGTCTTCCCGGATTTTGCTGGCCATGTCAAGAAGGGAATaGGCGCCCGACGGGGCAAAGATTGAGCCTGGGAGGAGTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KRGSSRILLAMSRRE*APDGAKIEPGRSPV Trigger: GACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACCCTCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS CAA 90 bp | GATGGGCTGTCTCTCTCTTTCCTGTTTACCTTAGAGGTATGCGGTTaGCTGGGCCTTGGGGACCGGGACCTTCTGCTGGGGGATCGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DGLSLSFLFTLEVCG*LGLGDRDLLLGDRD Trigger: GTCTCGATCCCCCAGCAGAAGGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAACAGGAAAGAGAGAGACAGCCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
||
| CDS GCA 72 bp | TTCCACACTTTCTCCACATTGCGAAGGGTCTGCGGGTaGCAGCTCTTCTTCAGGTTCAGGTCTCCGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FHTFSTLRRVCG*QLFFRFRSPPP Trigger: GGGAGGCGGAGACCTGAACCTGAAGAAGAGCTGGCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
||
| CDS GCA 72 bp | TCCGCCTTCCACACTTTCTCCACATTGCGAAGGGTCTaGGGGTGCCAGCTCTTCTTCAGGTTCAGGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: SAFHTFSTLRRV*GCQLFFRFRSP Trigger: CGGAGACCTGAACCTGAAGAAGAGCTGGCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGTGGAAGGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS CCA 72 bp | CTTCCCGGATTTTGCTGGCCATGTCAAGAAGGGAATTaGCGCCCGACGGGGCAAAGATTGAGCCTGGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LPGFCWPCQEGN*RPTGQRLSLGG Trigger: TCCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS CCA 72 bp | GGCTCTGCTCATCCTCGCTGCTGGAGCCACCGCTGCTaGAGCTTCTGTGTTTGTGCTTCCTGTGCTTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GSAHPRCWSHRC*SFCVCASCASS Trigger: AGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGAGGATGAGCAGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CAA 72 bp | TGTCAAGAAGGGAATTGGCGCCCGACGGGGCAAAGATaGAGCCTGGGAGGAGTCCTGTCTCAGAAGAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CQEGNWRPTGQR*SLGGVLSQKSS Trigger: GCTGCTCTTCTGAGACAGGACTCCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS CAA 72 bp | TCTTCCCGGATTTTGCTGGCCATGTCAAGAAGGGAATaGGCGCCCGACGGGGCAAAGATTGAGCCTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SSRILLAMSRRE*APDGAKIEPGR Trigger: CCTCCCAGGCTCAATCTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS CAA 90 bp | CTCTCCGCTTCATGCTTCTGCTCCGCCTTCCACACTTTCTCCACATaGCGAAGGGTCTGCGGGTGCCAGCTCTTCTTCAGGTTCAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LSASCFCSAFHTFST*RRVCGCQLFFRFRS Trigger: AGACCTGAACCTGAAGAAGAGCTGGCACCCGCAGACCCTTCGCAATGTGGAGAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS CAA 90 bp | CTGGCGTGCCTCTTGAGGGTGTTGAGCCTCTCCTCCTCCCTCCACTaGGCATTTTCCATCATCTCCTGCCGTTTCCGCTCTAGTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: LACLLRVLSLSSSLH*AFSIISCRFRSSSS Trigger: AGAGGAACTAGAGCGGAAACGGCAGGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGGAGAGGCTCAACACCCTCAAGAGGCACGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS CCA 72 bp | GCCGTTTCCGCTCTAGTTCCTCTGCTGAGAGTTTTCTaGTGTACCCAGAAGCATGCCGCCTCTGGTAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AVSALVPLLRVF*CTQKHAASGRP Trigger: AGGCCTACCAGAGGCGGCATGCTTCTGGGTACACCAGAAAACTCTCAGCAGAGGAACTAGAGCGGAAACGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS CAA 72 bp | TCTCTCTCTTTCCTGTTTACCTTAGAGGTATGCGGTTaGCTGGGCCTTGGGGACCGGGACCTTCTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SLSFLFTLEVCG*LGLGDRDLLLG Trigger: CCCCAGCAGAAGGTCCCGGTCCCCAAGGCCCAGCAAACCGCATACCTCTAAGGTAAACAGGAAAGAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS CAA 90 bp | ACCTCCCAGCAGTACCTTATGATGAAGAGAGGGTCTTCCCGGATTTaGCTGGCCATGTCAAGAAGGGAATTGGCGCCCGACGGGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: TSQQYLMMKRGSSRI*LAMSRRELAPDGAK Trigger: CTTTGCCCCGTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACCCTCTCTTCATCATAAGGTACTGCTGGGAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS GCA 72 bp | TGGGGCGCCCCAGCAAGTACTCATCACGGTTCACCATaGCACCCGGACCTTGGTACATCCAATCCAACTTTT | + |
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Preference number: 6 (lower is better) Translates to: WGAPASTHHGSP*HPDLGTSNPTF Trigger: AAAAGTTGGATTGGATGTACCAAGGTCCGGGTGGCATGGTGAACCGTGATGAGTACTTGCTGGGGCGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS CCA 72 bp | ACAGGGATGCCCATAAAGCAAGAAAAACGCCAGACCTaGAAGAGTCCCCAGGCCTCCCTGTCACAACCCTTC | + |
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Preference number: 6 (lower is better) Translates to: TGMPIKQEKRQT*KSPQASLSQPF Trigger: GAAGGGTTGTGACAGGGAGGCCTGGGGACTCTTCCAGGTCTGGCGTTTTTCTTGCTTTATGGGCATCCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS CAA 72 bp | TCGCTGCTGGAGCCACCGCTGCTGGAGCTTCTGTGTTaGTGCTTCCTGTGCTTCTTCTTCTTCTCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLLEPPLLELLC*CFLCFFFFSFF Trigger: GAAGAAGGAGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAGCGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 72 bp | CGCTGCAACTCCTCAATCTTCTTCCTCTCCGCTTCATaGTTCTGCTCCGCCTTCCACACTTTCTCCACATTG | + |
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Preference number: 6 (lower is better) Translates to: RCNSSIFFLSAS*FCSAFHTFSTL Trigger: CAATGTGGAGAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGAGAGGAAGAAGATTGAGGAGTTGCAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS GCA 72 bp | CTGCTGGAGCCACCGCTGCTGGAGCTTCTGTGTTTGTaGTTCCTGTGCTTCTTCTTCTTCTCCTTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLEPPLLELLCL*FLCFFFFSFFF Trigger: GAAGAAGAAGGAGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGGCTCCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CAA 72 bp | CAGTACCTTATGATGAAGAGAGGGTCTTCCCGGATTTaGCTGGCCATGTCAAGAAGGGAATTGGCGCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: QYLMMKRGSSRI*LAMSRRELAPD Trigger: GTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACCCTCTCTTCATCATAAGGTACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS CAA 90 bp | CCTGTAAGCCATATCCAGGGACTTTGGACAAAACAGGAAAGGAATTaGCCATCTTCTTTTGAGACCGGGCCTGGCTCTGCTCATCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: PVSHIQGLWTKQERN*PSSFETGPGSAHPR Trigger: GCGAGGATGAGCAGAGCCAGGCCCGGTCTCAAAAGAAGATGGCAAATTCCTTTCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS TCA 72 bp | AGAAGCATGCCGCCTCTGGTAGGCCTCCTTCTTAGGTaGTGGGCTGTCTCTCTCTTTCCTGTTTACCTTAGA | + |
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Preference number: 6 (lower is better) Translates to: RSMPPLVGLLLR*WAVSLFPVYLR Trigger: TCTAAGGTAAACAGGAAAGAGAGAGACAGCCCATCACCTAAGAAGGAGGCCTACCAGAGGCGGCATGCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS GCA 72 bp | AACTCCTCAATCTTCTTCCTCTCCGCTTCATGCTTCTaGTCCGCCTTCCACACTTTCTCCACATTGCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: NSSIFFLSASCF*SAFHTFSTLRR Trigger: CCTTCGCAATGTGGAGAAAGTGTGGAAGGCGGAGCAGAAGCATGAAGCGGAGAGGAAGAAGATTGAGGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000107579.2 |
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| CDS GCA 72 bp | TCCTCCTCCCTCCACTTGGCATTTTCCATCATCTCCTaGCGTTTCCGCTCTAGTTCCTCTGCTGAGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSLHLAFSIIS*RFRSSSSAESF Trigger: AAAACTCTCAGCAGAGGAACTAGAGCGGAAACGGCAGGAGATGATGGAAAATGCCAAGTGGAGGGAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018685.9 ENSMUST00000152395.2 |
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| CDS GCA 72 bp | AGTTTGGTGGATAAACCTAGTCTGGCTTGGTGCACTTaGCAGTGTGCTTCCATATGGCCTACAGCAGGCATC | + |
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Preference number: 6 (lower is better) Translates to: SLVDKPSLAWCT*QCASIWPTAGI Trigger: GATGCCTGCTGTAGGCCATATGGAAGCACACTGGCAAGTGCACCAAGCCAGACTAGGTTTATCCACCAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107579.2 |
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| CDS CAA 72 bp | TTCTTCCTTATGATGAAGAGAGGGTCTTCCCGGATTTaGCTGGCCATGTCAAGAAGGGAATTGGCGCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: FFLMMKRGSSRI*LAMSRRELAPD Trigger: GTCGGGCGCCAATTCCCTTCTTGACATGGCCAGCAAAATCCGGGAAGACCCTCTCTTCATCATAAGGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS GCA 72 bp | CCACCGCTGCTGGAGCTTCTGTGTTTGTGCTTCCTGTaGTTCTTCTTCTTCTCCTTCTTCTTCTTCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PPLLELLCLCFL*FFFFSFFFFFS Trigger: GGAGAAGAAGAAGAAGAAGGAGAAGAAGAAGAAGCACAGGAAGCACAAACACAGAAGCTCCAGCAGCGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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| CDS CAA 72 bp | TCAGAGTCCCTCACCTGTAAGCCATATCCAGGGACTTaGGACAAAACAGGAAAGGAATTTGCCATCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SESLTCKPYPGT*DKTGKEFAIFF Trigger: AAAGAAGATGGCAAATTCCTTTCCTGTTTTGTCCAAAGTCCCTGGATATGGCTTACAGGTGAGGGACTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018685.9 |
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