Pregenerated sensors for CWC22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027014Ensembl transcript IDs: ENSMUST00000065889.10, ENSMUST00000111818.8, ENSMUST00000111819.8, ENSMUST00000111821.9, ENSMUST00000111824.8, ENSMUST00000127289.8, ENSMUST00000128963.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTaGTTCTGGAGCCACAGCTGGGTGATACCTCTGCTGGCCCTCCCT | + |
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Preference number: 1 (lower is better) Translates to: VSTKHANTSPKPSYR*FWSHSWVIPLLALP Trigger: AGGGAGGGCCAGCAGAGGTATCACCCAGCTGTGGCTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCGGAGCCACAGCTGGGTaGTACCTCTGCTGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: AVSTKHANTSPKPSYRCFGATAG*YLCWPS Trigger: GGAGGGCCAGCAGAGGTATCACCCAGCTGTGGCTCC...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR CAA 90 bp | TGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTaGCTTCTGGAGCCACAGCTGGGTGATACCTCTGCTGGCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: CFYKTCKHFSKAVIP*LLEPQLGDTSAGPP Trigger: GGGAGGGCCAGCAGAGGTATCACCCAGCTGTGGCTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGCTGGCCCTCCCTTTaGTGGAGTTTAACAGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: AVSTKHANTSPKPSYRCFCWPSL*WSLTVS Trigger: ACTGACTGTTAAACTCCAGCAAAGGGAGGGCCAGCA...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTTCATACCGTTGCTTCTaGAGCCACAGCTGGGTGATA | + |
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Preference number: 2 (lower is better) Translates to: KCLDVELPSSKVNICLAVSYRCF*SHSWVI Trigger: TATCACCCAGCTGTGGCTCCAGAAGCAACGGTATGA...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR TCA 72 bp | AGCCGTCATACCGTTGCTTCTGGAGCCACAGCTGGGTaGTACCTCTGCTGGCCCTCCCTTTGCTGGAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: SRHTVASGATAG*YLCWPSLCWSL Trigger: TAAACTCCAGCAAAGGGAGGGCCAGCAGAGGTATCACCCAGCTGTGGCTCCAGAAGCAACGGTATGACGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR CCA 72 bp | GCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTaGAGCCACAGCTGGGTGATACCTCTGCTGGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: ANTSPKPSYRCF*SHSWVIPLLAL Trigger: GAGGGCCAGCAGAGGTATCACCCAGCTGTGGCTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTAAAGCCGTCATACCGTaGCTTCTGGAGCCACAGCTG | + |
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Preference number: 3 (lower is better) Translates to: KCLDVELPSSKVNICLAVKAVIP*LLEPQL Trigger: CAGCTGTGGCTCCAGAAGCAACGGTATGACGGCTTT...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACCATGTCGGTTCCTCCTaGGGAGAACTCTGCCCTCCG | + |
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Preference number: 4 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDHVGSS*GELCPP Trigger: CGGAGGGCAGAGTTCTCCTCAGGAGGAACCGACATG...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCACTGAGGTAGAGCTCTaGGTGCTGGAGGAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LAVSTKHANTSPKPSYRCTEVEL*VLEEEE Trigger: CTCCTCCTCCTCCAGCACTCAGAGCTCTACCTCAGT...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACTGTGTATCTGTCTTCTaGGGAGGAGCTCCGGCGGTA | + |
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Preference number: 4 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDCVSVF*GGAPAV Trigger: TACCGCCGGAGCTCCTCCCCAGAAGACAGATACACA...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCGCTCCTGCATCATCCTaGGCTTCGCAGGAGGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LAVSTKHANTSPKPSYRCAPASS*ASQEGY Trigger: ATATCCCTCCTGCGAAGCTCAGGATGATGCAGGAGC...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCGCTGCTGTCAGATTCTaGGTCAGAGGAATCAGACGC | + |
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Preference number: 4 (lower is better) Translates to: LAVSTKHANTSPKPSYRCAAVRF*VRGIRR Trigger: GCGTCTGATTCCTCTGACTCAGAATCTGACAGCAGC...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | TGTGCAGGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGTCTCCCTTCTGTTGTaGCCAGAGGACTTCATGTGT | + |
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Preference number: 4 (lower is better) Translates to: CAGGCNFVFLEVLLRLAYVSLLL*PEDFMC Trigger: ACACATGAAGTCCTCTGGTCACAACAGAAGGGAGAC...ATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCCTGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACAGATCGCTCATAGTCTaGCCGGCTGTAATCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDRSLIV*PAVIRV Trigger: TACTCTGATTACAGCCGGTCAGACTATGAGCGATCT...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR GCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTCTGTGATCTGCTCCTaGATCATCCTGAGCTTCGCA | + |
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Preference number: 4 (lower is better) Translates to: AVSTKHANTSPKPSYRCFSVICS*IILSFA Trigger: TGCGAAGCTCAGGATGATGCAGGAGCAGATCACAGA...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGATTGGAGACGCACTCTaGGCTTGCAGAACAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: FYKTCKHFSKAVIPLLLEIGDAL*ACRTDL Trigger: CAGATCTGTTCTGCAAGCCCAGAGTGCGTCTCCAAT...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCCCCCTTGGTGACACCTaGGTTAATTTGAGACCACAC | + |
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Preference number: 4 (lower is better) Translates to: AVSTKHANTSPKPSYRCFPLGDT*VNLRPH Trigger: GTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGG...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | TGTGCAGGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATAGCTGCTTTTATCTGTaGTCTGCTCCTGCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: CAGGCNFVFLEVLLRLAYSCFYL*SAPASS Trigger: GGATGATGCAGGAGCAGATCACAGATAAAAGCAGCT...ATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCCTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACTCCCAGCTCATCCTCTaGTATGCTAAGCTGCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDSQLIL*YAKLLL Trigger: TAAAAGCAGCTTAGCATATCAGAGGATGAGCTGGGA...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR GCA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACCTTTTATCTGTGATCTaGTCCTGCATCATCCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDLLSVI*SCIILS Trigger: GCTCAGGATGATGCAGGAGCAGATCACAGATAAAAG...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACGTGGGAATTTTGAGTTaGTTATTGCCACCAAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDVGILS*LLPPKL Trigger: CAGCTTTGGTGGCAATAATCAACTCAAAATTCCCAC...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGTCCAGAATAACAGGGTaGTCCTTGAATCCATCCTTC | + |
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Preference number: 4 (lower is better) Translates to: FYKTCKHFSKAVIPLLLESRITG*SLNPSF Trigger: GAAGGATGGATTCAAGGACCACCCTGTTATTCTGGA...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCCTACTTCCAGCTCCTTaGTCTGTGTTTGAATCACTG | + |
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Preference number: 4 (lower is better) Translates to: AVSTKHANTSPKPSYRCFLLPAP*SVFESL Trigger: CAGTGATTCAAACACAGACCAAGGAGCTGGAAGTAG...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR GCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTGACGCACTCTGGGCTTaGAGAACAGATCTGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: KCLDVELPSSKVNICLAVDALWA*RTDLDS Trigger: GCTGTCCAGATCTGTTCTGCAAGCCCAGAGTGCGTC...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | TGTGCAGGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATCCTTCAAAGAATGGCTaGAGAGTTTCATCCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: CAGGCNFVFLEVLLRLAYPSKNG*RVSSFN Trigger: GTTGAAGGATGAAACTCTCCAGCCATTCTTTGAAGG...ATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCCTGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCCAGACCTTCAAAGAATaGCTGGAGAGTTTCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: AVSTKHANTSPKPSYRCFQTFKE*LESFIL Trigger: AAGGATGAAACTCTCCAGCCATTCTTTGAAGGTCTG...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR GCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTACTTCGTGATTCCATaGTGTCATCGTAAGAGTATC | + |
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Preference number: 4 (lower is better) Translates to: AVSTKHANTSPKPSYRCFYFVIP*CHRKSI Trigger: GATACTCTTACGATGACAGCATGGAATCACGAAGTA...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCCAGAGTTCTTTTGTTTaGCTCTCTGCAAACTCCATT | + |
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Preference number: 4 (lower is better) Translates to: LAVSTKHANTSPKPSYRCQSSFV*LSANSI Trigger: AATGGAGTTTGCAGAGAGCCAAACAAAAGAACTCTG...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | TGTGCAGGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATAATCTGTGGGAATTTTaGGTTGATTATTGCCACCAA | + |
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Preference number: 4 (lower is better) Translates to: CAGGCNFVFLEVLLRLAYNLWEF*VDYCHQ Trigger: TTGGTGGCAATAATCAACTCAAAATTCCCACAGATT...ATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCCTGCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | GCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCACTTCAATCATGTACTaGACTCTTTTGTCGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: AVSTKHANTSPKPSYRCFTSIMY*TLLSIS Trigger: TGAGATCGACAAAAGAGTTCAGTACATGATTGAAGT...GAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCGAAACGAGACTAGGTTaGTTTCTGTTTTGTCATGAA | + |
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Preference number: 4 (lower is better) Translates to: LAVSTKHANTSPKPSYRCETRLG*FLFCHE Trigger: TTCATGACAAAACAGAAATCAACCTAGTCTCGTTTC...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR GCA 90 bp | TTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGATATTGCCACCAAAGCTaGATAAACGTGAGTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: FLQNMQTLLQSRHTVASGYCHQS*INVSED Trigger: ATCTTCACTCACGTTTATGCAGCTTTGGTGGCAATA...TCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | TTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGATATTCACACAGTTCCTaGAAGAAGATCTTGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: FLQNMQTLLQSRHTVASGYSHSS*KKILTK Trigger: TTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATA...TCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTCTTTTGTTCAGCTTCTaGTTTCTGGGCTACGATGAC | + |
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Preference number: 4 (lower is better) Translates to: KCLDVELPSSKVNICLAVLLFSF*FLGYDD Trigger: GTCATCGTAGCCCAGAAACCAGAAGCTGAACAAAAG...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR TCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTATGTGCCACAAATTTTaGAGCAGTCAGGCAAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: KCLDVELPSSKVNICLAVMCHKF*SSQAKL Trigger: CAACTTTGCCTGACTGCTTCAAAATTTGTGGCACAT...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTCTAAACTTGACTGAATaGCAAGATAGATTGTACGGC | + |
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Preference number: 4 (lower is better) Translates to: KCLDVELPSSKVNICLAVLNLTE*QDRLYG Trigger: GCCGTACAATCTATCTTGCCATTCAGTCAAGTTTAG...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTTCATGTGCCACATTTTaGTTAATAAGATGTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: KCLDVELPSSKVNICLAVSCATF*LIRCAT Trigger: TGTGGCACATCTTATTAACCAAAATGTGGCACATGA...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR GCA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTAATCAAGTATCATGTTaGAGAGTTCTTTTGTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: KCLDVELPSSKVNICLAVNQVSC*RVLLFG Trigger: GCCAAACAAAAGAACTCTGCAACATGATACTTGATT...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS TCA 90 bp | AGCGGGTCCAGCTCATCCTTCTTCTTCTTCCATGTCGGTTCCTCCTaGGGAGAACTCTGCCCTCCGCCTCGGGCTGGACTCCTGTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SGSSSSFFFFHVGSS*GELCPPPRAGLLSG Trigger: CCCTGACAGGAGTCCAGCCCGAGGCGGAGGGCAGAGTTCTCCTCAGGAGGAACCGACATGGAAGAAGAAGAAGGATGAGCTGGACCCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000127289.8 |
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| CDS CCA 90 bp | AGGAGAACTCTGCCCTCCGCCTCGGGCTGGACTCCTGTCAGGGGATaGCGATTTCCGGGACCGTTTCCGATGATCTGCATCTCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RRTLPSASGWTPVRG*RFPGPFPMICISLS Trigger: AGAGAGAGAGATGCAGATCATCGGAAACGGTCCCGGAAATCGCCATCCCCTGACAGGAGTCCAGCCCGAGGCGGAGGGCAGAGTTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000127289.8 ENSMUST00000128963.2 |
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| CDS CCA 90 bp | CTTTGGTCCTCCCTGCCTCCTTCTCGCCTCCGCTCAAGTGCCTGGTaGCCCCTGGCTAACTTATCAACTTCTTCGCCTCTGGCCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: LWSSLPPSRLRSSAW*PLANLSTSSPLAFP Trigger: AGGGAAGGCCAGAGGCGAAGAAGTTGATAAGTTAGCCAGGGGCCACCAGGCACTTGAGCGGAGGCGAGAAGGAGGCAGGGAGGACCAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 90 bp | TTCGCCTCTGGCCTTCCCTTGTCTCTTCTTTCTTGTACCTTTAGCTaGGGTAGAGCTCTGAGTGCTGGAGGAGGAGGAGGAGTCGCTCGC | + |
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Preference number: 5 (lower is better) Translates to: FASGLPLSLLSCTFS*GRALSAGGGGGVAR Trigger: GCGAGCGACTCCTCCTCCTCCTCCAGCACTCAGAGCTCTACCTCAGCTAAAGGTACAAGAAAGAAGAGACAAGGGAAGGCCAGAGGCGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111818.8 ENSMUST00000111819.8 |
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| CDS GCA 90 bp | TTGCTAGGGGATCTCTCCAGTCTGCATCTCGTGAGTTCTGAGCTCTaGGTCTTTCAGACCTTGCTCTCTCAGTCCTCCCTTCCTGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LLGDLSSLHLVSSEL*VFQTLLSQSSLPGA Trigger: GGCACCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGAGAGATCCCCTAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 90 bp | CTCTTGCTCTGTGTATCTGTCTTCTGGGGAGGAGCTCCGGCGGTATaGACTGTGGGTCTCCCTTCTGTTGTGACCAGAGGACTTCATGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLCVSVFWGGAPAV*TVGLPSVVTRGLHV Trigger: CACATGAAGTCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAGCTCCTCCCCAGAAGACAGATACACAGAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000128963.2 |
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| CDS TCA 90 bp | TCTCCGCTTCTTTGGCTCGCCATGCCTGTCTTCTGGCTCTCTGTGTaGGCCTTGTTCTCGGCCATTGCCAACTCTGCTGTGACTATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPLLWLAMPVFWLSV*ALFSAIANSAVTIL Trigger: GAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAGCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 90 bp | CTCTTGCTCTGTGTATCTGTCTTCTGGGGAGGAGCTCCGGCGGTATaGACTGTGGGTCTCCCTTCTGTTGTGACCAGAGGACTGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLLCVSVFWGGAPAV*TVGLPSVVTRGLLH Trigger: ATGAAGCAGTCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAGCTCCTCCCCAGAAGACAGATACACAGAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111819.8 ENSMUST00000127289.8 |
||
| CDS TCA 90 bp | ATGTGCTTTGCTAGGGGATCTCTCCAGTCTGCATCTCGTGAGTTCTaGGCTCTGCGTCTTTCAGACCTTGCTCTCTCAGTCCTCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MCFARGSLQSASREF*ALRLSDLALSVLPS Trigger: GGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGAGAGATCCCCTAGCAAAGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 90 bp | GGCTCTCTGTGTGAGCCTTGTTCTCGGCCATTGCCAACTCTGCTGTaGCTATTCTCATGGCTTCTGTCGTCTATGTGCTTTGCTAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GSLCEPCSRPLPTLL*LFSWLLSSMCFARG Trigger: TCCCCTAGCAAAGCACATAGACGACAGAAGCCATGAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS GCA 90 bp | CATGCCTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCGGCCATTaGCAACTCTGCTGTGACTATTCTCATGGCTTCTGTCGTCTATGT | + |
|
Preference number: 5 (lower is better) Translates to: HACLLALCVSLVLGH*QLCCDYSHGFCRLC Trigger: ACATAGACGACAGAAGCCATGAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS GCA 90 bp | TCAGAAAAAGAATCTCTTCTCTCTCTCCGCTTCTTTGGCTCGCCATaGCTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCTCGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: SEKESLLSLRFFGSP*LSSGSLCEPCSRPL Trigger: CAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAGCGGAGAGAGAGAAGAGATTCTTTTTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 90 bp | CAAGCTCTTAGTCTTCTTGTATTTTCTGAAACTGAGGTAGAGCTCTaGGTGCTGGAGGAGGAGGAGGAGTCGCTCGCATCACTAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QALSLLVFSETEVEL*VLEEEEESLASLED Trigger: GTCCTCTAGTGATGCGAGCGACTCCTCCTCCTCCTCCAGCACTCAGAGCTCTACCTCAGTTTCAGAAAATACAAGAAGACTAAGAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCAGACGCACTCTGGGCTaGCAGAACAGATCTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCRRTLG*QNRSGQ Trigger: CTGTCCAGATCTGTTCTGCAAGCCCAGAGTGCGTCT...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
||
| CDS TCA 90 bp | TCAGGGCTGGTTTCTTTTGTTCAGCTTCTGGTTTCTGGGCTACGATaGCCTTGGGCGTATTTTTCAGATGTTCTCGCAGTTCATCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGLVSFVQLLVSGLR*PWAYFSDVLAVHPS Trigger: TGACGGATGAACTGCGAGAACATCTGAAAAATACGCCCAAGGTCATCGTAGCCCAGAAACCAGAAGCTGAACAAAAGAAACCAGCCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACCAGGGCTGGTTTCTTTaGTTCAGCTTCTGGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDQGWFL*FSFWFL Trigger: CAGAAACCAGAAGCTGAACAAAAGAAACCAGCCCTG...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
||
| CDS-3UTR CAA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGCTCCTTGGTCTGTGTTaGAATCACTGTCTCCTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCKHFSKAVIPLLLELLGLC*NHCLLR Trigger: ACGAAGGAGACAGTGATTCAAACACAGACCAAGGAG...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
||
| CDS CCA 90 bp | TTTCGAAGGCGTTCAAAGATTGCATTAATTCCCCTTGGTGACACCTaGGTTAATTTGAGACCACACTCTTTGAGGAAGCCGATAGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: FRRRSKIALIPLGDT*VNLRPHSLRKPIAT Trigger: AGTAGCTATCGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATTAATGCAATCTTTGAACGCCTTCGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS-3UTR CAA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACTTGTTGATGAGACCATaGATGGATTTCTTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDLLMRP*MDFFRA Trigger: GGCTCTGAAGAAATCCATCAATGGTCTCATCAACAA...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | GGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGAGGACTTCATAGGTCCTTTGTaGGGCACAGCAATCAAGTAT | + |
|
Preference number: 5 (lower is better) Translates to: GGCNFVFLEVLLRLAYEDFIGPL*GTAIKY Trigger: ATACTTGATTGCTGTGCCCAACAAAGGACCTATGAA...GTCCTCATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCATGGAAGTGAAGAAGTaGATGGCAAACCGGGTATTG | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCMEVKK*MANRVL Trigger: CAATACCCGGTTTGCCATCAACTTCTTCACTTCCAT...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS CCA 90 bp | AACCTCGCATTCAGTTTAGGAAGACCCATGTATTCACACAGTTCCTaGAAGAAGATCTTGACAAAAATTCGACTAGACGATGTCGTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NLAFSLGRPMYSHSS*KKILTKIRLDDVVV Trigger: GACCACGACATCGTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATACATGGGTCTTCCTAAACTGAATGCGAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGGAGATGTTGACCTTGTaGATGAGACCATTGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCKHFSKAVIPLLLEEMLTL*MRPLMD Trigger: ATCCATCAATGGTCTCATCAACAAGGTCAACATCTC...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCCTCATGTGCCACATTTaGGTTAATAAGATGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCLMCHI*VNKMCH Trigger: GTGGCACATCTTATTAACCAAAATGTGGCACATGAG...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
||
| CDS-3UTR CAA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGATGAATAGTTACTTTTaGCCCTCCTTCCTCGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCKHFSKAVIPLLLEMNSYF*PSFLVF Trigger: GAAGACGAGGAAGGAGGGCAAAAAGTAACTATTCAT...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGTTTTTCATAGGTCCTTaGTTGGGCACAGCAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCKHFSKAVIPLLLEFFIGP*LGTAIK Trigger: CTTGATTGCTGTGCCCAACAAAGGACCTATGAAAAA...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGTCTGACAATGTTCTCTaGAAGGAGCTCTTGGATAAT | + |
|
Preference number: 5 (lower is better) Translates to: FYKTCKHFSKAVIPLLLESDNVL*KELLDN Trigger: ATTATCCAAGAGCTCCTTCAAGAGAACATTGTCAGA...CTCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGAGATGTGCCACAAATTTaGAAGCAGTCAGGCAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLQNMQTLLQSRHTVASGDVPQI*KQSGKV Trigger: AACTTTGCCTGACTGCTTCAAAATTTGTGGCACATC...TCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGATGTTGCAGAGTTCTTTaGTTTGGCTCTCTGCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: FLQNMQTLLQSRHTVASGCCRVL*FGSLQT Trigger: AGTTTGCAGAGAGCCAAACAAAAGAACTCTGCAACA...TCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TGTGCAGGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATCATTTCTCAATTTGTTaGTCTCTAAGCGATGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CAGGCNFVFLEVLLRLAYHFSIC*SLSDGW Trigger: CCATCCATCGCTTAGAGACAAACAAATTGAGAAATG...ATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCCTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TGTGCAGGAGGCTGTAATTTTGTCTTCTTAGAGGTCCTTCTCCGGTTAGCATATGCAACATTTCTCAATTaGTTTGTCTCTAAGCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: CAGGCNFVFLEVLLRLAYATFLN*FVSKRW Trigger: CCATCGCTTAGAGACAAACAAATTGAGAAATGTTGC...ATATGCTAACCGGAGAAGGACCTCTAAGAAGACAAAATTACAGCCTCCTGCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTCCTGGAAGAAGATCTaGACAAAAATTCGACTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCSWKKI*TKIRLD Trigger: GTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGA...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS TCA 90 bp | TTGAATCCATCCTTCCGTACAGCAAACATCACTTCAATCATGTACTaGACTCTTTTGTCGATCTCAGACTCGTGTAGAATGTTTCGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNPSFRTANITSIMY*TLLSISDSCRMFRR Trigger: CCTTCGAAACATTCTACACGAGTCTGAGATCGACAAAAGAGTTCAGTACATGATTGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | TTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTTCTGGATTAGAGATGTTGACCTaGTTGATGAGACCATTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLQNMQTLLQSRHTVASGLEMLT*LMRPLM Trigger: CATCAATGGTCTCATCAACAAGGTCAACATCTCTAA...TCCAGAAGCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCTCCATTTTCAGCAACTaGTGTGCACATTCTTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCSIFSN*CAHSSK Trigger: TTTTGAAGAATGTGCACACAAGTTGCTGAAAATGGA...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCCAATCAAGTATCATGTaGCAGAGTTCTTTTGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCQSSIM*QSSFVW Trigger: CCAAACAAAAGAACTCTGCAACATGATACTTGATTG...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | CTAGCTGTTTCTACAAAACATGCAAACACTTCTCCAAAGCCGTCATACCGTTGCAAGCTCTTAGTCTTCTaGTATTTTCTGAAACTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTKHANTSPKPSYRCKLLVF*YFLKLR Trigger: CCTCAGTTTCAGAAAATACAAGAAGACTAAGAGCTT...GCAACGGTATGACGGCTTTGGAGAAGTGTTTGCATGTTTTGTAGAAACAGCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS TCA 90 bp | AACCTCATGTGCCACATTTTGGTTAATAAGATGTGCCACAAATTTTaGAGCAGTCAGGCAAAGTTGCTTATCGTTCCTTCGATAGCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NLMCHILVNKMCHKF*SSQAKLLIVPSIAF Trigger: AAAGGCTATCGAAGGAACGATAAGCAACTTTGCCTGACTGCTTCAAAATTTGTGGCACATCTTATTAACCAAAATGTGGCACATGAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS-3UTR CAA 90 bp | AAGTGCCTAGATGTGGAATTGCCAAGTAGTAAAGTAAATATATGTCTAGCTGTTCAACACTGTCATCTGTaGGTCTCTCTAGTAGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KCLDVELPSSKVNICLAVQHCHL*VSLVAK Trigger: CTTTGCTACTAGAGAGACCAACAGATGACAGTGTTG...AACAGCTAGACATATATTTACTTTACTACTTGGCAATTCCACATCTAGGCACTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111824.8 |
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| CDS TCA 90 bp | TCAATTTGTTTGTCTCTAAGCGATGGATGGTGTCGTACTGTTCCTTaGATATACTTTCAAATGATTCCATGTATTCCTTTTTCAGCATAC | + |
|
Preference number: 5 (lower is better) Translates to: SICLSLSDGWCRTVP*IYFQMIPCIPFSAY Trigger: GTATGCTGAAAAAGGAATACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCATCGCTTAGAGACAAACAAATTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CCA 72 bp | CTGCCCTCCGCCTCGGGCTGGACTCCTGTCAGGGGATaGCGATTTCCGGGACCGTTTCCGATGATCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: LPSASGWTPVRG*RFPGPFPMICI Trigger: GATGCAGATCATCGGAAACGGTCCCGGAAATCGCCATCCCCTGACAGGAGTCCAGCCCGAGGCGGAGGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000127289.8 ENSMUST00000128963.2 |
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| CDS CCA 72 bp | CTCCTTCTCGCCTCCGCTCAAGTGCCTGGTGGCCCCTaGCTAACTTATCAACTTCTTCGCCTCTGGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLLASAQVPGGP*LTYQLLRLWPS Trigger: GGAAGGCCAGAGGCGAAGAAGTTGATAAGTTAGCCAGGGGCCACCAGGCACTTGAGCGGAGGCGAGAAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CCA 72 bp | TCCCTGCCTCCTTCTCGCCTCCGCTCAAGTGCCTGGTaGCCCCTGGCTAACTTATCAACTTCTTCGCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLPPSRLRSSAW*PLANLSTSSPL Trigger: CAGAGGCGAAGAAGTTGATAAGTTAGCCAGGGGCCACCAGGCACTTGAGCGGAGGCGAGAAGGAGGCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
||
| CDS CCA 72 bp | TCCTCCCTGCCTCCTTCTCGCCTCCGCTCAAGTGCCTaGTGGCCCCTGGCTAACTTATCAACTTCTTCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLPPSRLRSSA*WPLANLSTSSP Trigger: AGGCGAAGAAGTTGATAAGTTAGCCAGGGGCCACCAGGCACTTGAGCGGAGGCGAGAAGGAGGCAGGGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
||
| CDS TCA 72 bp | AGCTCATCCTTCTTCTTCTTCCATGTCGGTTCCTCCTaGGGAGAACTCTGCCCTCCGCCTCGGGCTGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSFFFFHVGSS*GELCPPPRAGL Trigger: GAGTCCAGCCCGAGGCGGAGGGCAGAGTTCTCCTCAGGAGGAACCGACATGGAAGAAGAAGAAGGATGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000127289.8 |
||
| CDS CAA 90 bp | TCCAGTCTGCATCTCGTGAGTTCTGAGCTCTGCGTCTTTCAGACCTaGCTCTCTCAGTCCTCCCTTCCTGGTGCCTTTGGTCCTCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLHLVSSELCVFQT*LSQSSLPGAFGPPC Trigger: GCAGGGAGGACCAAAGGCACCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 72 bp | CTTTGGCTCGCCATGCCTGTCTTCTGGCTCTCTGTGTaGGCCTTGTTCTCGGCCATTGCCAACTCTGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LWLAMPVFWLSV*ALFSAIANSAV Trigger: CACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
||
| CDS TCA 72 bp | TGTGTATCTGTCTTCTGGGGAGGAGCTCCGGCGGTATaGACTGTGGGTCTCCCTTCTGTTGTGACCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CVSVFWGGAPAV*TVGLPSVVTRG Trigger: TCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAGCTCCTCCCCAGAAGACAGATACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000127289.8 ENSMUST00000128963.2 |
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| CDS TCA 72 bp | GCTAGGGGATCTCTCCAGTCTGCATCTCGTGAGTTCTaGGCTCTGCGTCTTTCAGACCTTGCTCTCTCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ARGSLQSASREF*ALRLSDLALSV Trigger: GACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGAGAGATCCCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 72 bp | CTCCGGCGGTATGAACTGTGGGTCTCCCTTCTGTTGTaGCCAGAGGACTGCTTCATGTGTGCCACACTACTT | + |
|
Preference number: 6 (lower is better) Translates to: LRRYELWVSLLL*PEDCFMCATLL Trigger: AAGTAGTGTGGCACACATGAAGCAGTCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111819.8 ENSMUST00000127289.8 |
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| CDS CAA 72 bp | CATCTCGTGAGTTCTGAGCTCTGCGTCTTTCAGACCTaGCTCTCTCAGTCCTCCCTTCCTGGTGCCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLVSSELCVFQT*LSQSSLPGAFG Trigger: ACCAAAGGCACCAGGAAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 72 bp | CTCCGGCGGTATGAACTGTGGGTCTCCCTTCTGTTGTaGCCAGAGGACTTCATGTGTGCCACACTACTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRRYELWVSLLL*PEDFMCATLLF Trigger: GAAAAGTAGTGTGGCACACATGAAGTCCTCTGGTCACAACAGAAGGGAGACCCACAGTTCATACCGCCGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000128963.2 |
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| CDS TCA 72 bp | TGGAGACTTTTCTCTCCTCCGGTCCTGACTTCTCTTTaGCTCTCTAGACTGTTCAGGGCGTCTGCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WRLFSPPVLTSL*LSRLFRASARL Trigger: AAGCCTGGCAGACGCCCTGAACAGTCTAGAGAGTCAAAGAGAAGTCAGGACCGGAGGAGAGAAAAGTCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS GCA 72 bp | GATCTCTCCAGTCTGCATCTCGTGAGTTCTGAGCTCTaGGTCTTTCAGACCTTGCTCTCTCAGTCCTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: DLSSLHLVSSEL*VFQTLLSQSSL Trigger: AAGGGAGGACTGAGAGAGCAAGGTCTGAAAGACGCAGAGCTCAGAACTCACGAGATGCAGACTGGAGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS GCA 72 bp | GAATCTCTTCTCTCTCTCCGCTTCTTTGGCTCGCCATaGCTGTCTTCTGGCTCTCTGTGTGAGCCTTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESLLSLRFFGSP*LSSGSLCEPCS Trigger: AGAACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAGCGGAGAGAGAGAAGAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CAA 90 bp | CGCAGTTCATCCGTCAATCCTCCGAGACCTATGGAAGTGAAGAAGTaGATGGCAAACCGGGTATTGCGTGGGTTGTCTCTGGGTAACAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSSVNPPRPMEVKK*MANRVLRGLSLGNR Trigger: TCTGTTACCCAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCACTTCCATAGGTCTCGGAGGATTGACGGATGAACTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS GCA 72 bp | CTTCTGGCTCTCTGTGTGAGCCTTGTTCTCGGCCATTaGCAACTCTGCTGTGACTATTCTCATGGCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLALCVSLVLGH*QLCCDYSHGFC Trigger: ACAGAAGCCATGAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACACAGAGAGCCAGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CAA 72 bp | TCCGTCAATCCTCCGAGACCTATGGAAGTGAAGAAGTaGATGGCAAACCGGGTATTGCGTGGGTTGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVNPPRPMEVKK*MANRVLRGLSL Trigger: CAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCACTTCCATAGGTCTCGGAGGATTGACGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | GTGAAGAAGTTGATGGCAAACCGGGTATTGCGTGGGTaGTCTCTGGGTAACAGACCTTCAAAGAATGGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VKKLMANRVLRG*SLGNRPSKNGW Trigger: CCAGCCATTCTTTGAAGGTCTGTTACCCAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS TCA 72 bp | ATCGTAAGAGTATCCTCTTCTAGATCGCTCATAGTCTaGCCGGCTGTAATCAGAGTAACCTCTATCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: IVRVSSSRSLIV*PAVIRVTSIPG Trigger: CCCCGGGATAGAGGTTACTCTGATTACAGCCGGTCAGACTATGAGCGATCTAGAAGAGGATACTCTTACGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 ENSMUST00000127289.8 ENSMUST00000128963.2 |
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| CDS TCA 72 bp | CAACACTGTCATCTGTTGGTCTCTCTAGTAGCAAAGTaGGCATCTCCAGGCACAGAACCTCATGTGCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: QHCHLLVSLVAK*ASPGTEPHVPH Trigger: ATGTGGCACATGAGGTTCTGTGCCTGGAGATGCTCACTTTGCTACTAGAGAGACCAACAGATGACAGTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS TCA 72 bp | TGTGAGCCTTGTTCTCGGCCATTGCCAACTCTGCTGTaGCTATTCTCATGGCTTCTGTCGTCTATGTGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CEPCSRPLPTLL*LFSWLLSSMCF Trigger: AAAGCACATAGACGACAGAAGCCATGAGAATAGTCACAGCAGAGTTGGCAATGGCCGAGAACAAGGCTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS TCA 72 bp | TTCTGTGTTGTTGGAGACTTTTCTCTCCTCCGGTCCTaGCTTCTCTTTGACTCTCTAGACTGTTCAGGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FCVVGDFSLLRS*LLFDSLDCSGR Trigger: ACGCCCTGAACAGTCTAGAGAGTCAAAGAGAAGTCAGGACCGGAGGAGAGAAAAGTCTCCAACAACACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CCA 72 bp | TATTGCCACCAAAGCTGCATAAACGTGAGTGAAGATTaGAGACGCACTCTGGGCTTGCAGAACAGATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YCHQSCINVSED*RRTLGLQNRSG Trigger: TCCAGATCTGTTCTGCAAGCCCAGAGTGCGTCTCCAATCTTCACTCACGTTTATGCAGCTTTGGTGGCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | CCTATGGAAGTGAAGAAGTTGATGGCAAACCGGGTATaGCGTGGGTTGTCTCTGGGTAACAGACCTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PMEVKKLMANRV*RGLSLGNRPSK Trigger: CTTTGAAGGTCTGTTACCCAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCACTTCCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | TGTGACTATTCTCATGGCTTCTGTCGTCTATGTGCTTaGCTAGGGGATCTCTCCAGTCTGCATCTCGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: CDYSHGFCRLCA*LGDLSSLHLVS Trigger: ACTCACGAGATGCAGACTGGAGAGATCCCCTAGCAAAGCACATAGACGACAGAAGCCATGAGAATAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CAA 72 bp | TTTCAGAAAAAGAATCTCTTCTCTCTCTCCGCTTCTTaGGCTCGCCATGCCTGTCTTCTGGCTCTCTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FQKKNLFSLSAS*ARHACLLALCV Trigger: CACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAGCGGAGAGAGAGAAGAGATTCTTTTTCTGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CAA 90 bp | CCTATGGAAGTGAAGAAGTTGATGGCAAACCGGGTATTGCGTGGGTaGTCTCTGGGTAACAGACCTTCAAAGAATGGCTGGAGAGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PMEVKKLMANRVLRG*SLGNRPSKNGWRVS Trigger: TGAAACTCTCCAGCCATTCTTTGAAGGTCTGTTACCCAGAGACAACCCACGCAATACCCGGTTTGCCATCAACTTCTTCACTTCCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | GCTTCTCATTTTCAGAAAAAGAATCTCTTCTCTCTCTCCGCTTCTTaGGCTCGCCATGCCTGTCTTCTGGCTCTCTGTGTGAGCCTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: ASHFQKKNLFSLSAS*ARHACLLALCVSLV Trigger: AACAAGGCTCACACAGAGAGCCAGAAGACAGGCATGGCGAGCCAAAGAAGCGGAGAGAGAGAAGAGATTCTTTTTCTGAAAATGAGAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 |
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| CDS CCA 72 bp | GTCAGGGCTGGTTTCTTTTGTTCAGCTTCTGGTTTCTaGGCTACGATGACCTTGGGCGTATTTTTCAGATGT | + |
|
Preference number: 6 (lower is better) Translates to: VRAGFFCSASGF*ATMTLGVFFRC Trigger: ACATCTGAAAAATACGCCCAAGGTCATCGTAGCCCAGAAACCAGAAGCTGAACAAAAGAAACCAGCCCTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | TTAATTCCCCTTGGTGACACCTGGGTTAATTTGAGACCACACTCTTaGAGGAAGCCGATAGCTACTTCAACACTGTCATCTGTTGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LIPLGDTWVNLRPHS*RKPIATSTLSSVGL Trigger: GAGACCAACAGATGACAGTGTTGAAGTAGCTATCGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CCA 72 bp | CGTTCAAAGATTGCATTAATTCCCCTTGGTGACACCTaGGTTAATTTGAGACCACACTCTTTGAGGAAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RSKIALIPLGDT*VNLRPHSLRKP Trigger: CGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATTAATGCAATCTTTGAACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | CTTGGTGACACCTGGGTTAATTTGAGACCACACTCTTaGAGGAAGCCGATAGCTACTTCAACACTGTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: LGDTWVNLRPHS*RKPIATSTLSS Trigger: AGATGACAGTGTTGAAGTAGCTATCGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | CGTTCAAAGATTGCATTAATTCCCCTTGGTGACACCTGGGTTAATTaGAGACCACACTCTTTGAGGAAGCCGATAGCTACTTCAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RSKIALIPLGDTWVN*RPHSLRKPIATSTL Trigger: CAGTGTTGAAGTAGCTATCGGCTTCCTCAAAGAGTGTGGTCTCAAATTAACCCAGGTGTCACCAAGGGGAATTAATGCAATCTTTGAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CCA 72 bp | TCTTCCACTAAATCAAGTCCTTCCAGAATAACAGGGTaGTCCTTGAATCCATCCTTCCGTACAGCAAACATC | + |
|
Preference number: 6 (lower is better) Translates to: SSTKSSPSRITG*SLNPSFRTANI Trigger: GATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGATTTAGTGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | TCCTCTTCCACTAAATCAAGTCCTTCCAGAATAACAGGGTGGTCCTaGAATCCATCCTTCCGTACAGCAAACATCACTTCAATCATGTAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSTKSSPSRITGWS*NPSFRTANITSIMY Trigger: GTACATGATTGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGATTTAGTGGAAGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | CTTATATTAGAGATGTTGACCTTGTTGATGAGACCATaGATGGATTTCTTCAGAGCCTCCCAGCTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LILEMLTLLMRP*MDFFRASQLIL Trigger: GAGGATGAGCTGGGAGGCTCTGAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCTAATATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | ACTAAATCAAGTCCTTCCAGAATAACAGGGTGGTCCTaGAATCCATCCTTCCGTACAGCAAACATCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TKSSPSRITGWS*NPSFRTANITS Trigger: TGAAGTGATGTTTGCTGTACGGAAGGATGGATTCAAGGACCACCCTGTTATTCTGGAAGGACTTGATTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 72 bp | AGACCCATGTATTCACACAGTTCCTGGAAGAAGATCTaGACAAAAATTCGACTAGACGATGTCGTGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RPMYSHSSWKKI*TKIRLDDVVVS Trigger: AGAGACCACGACATCGTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATACATGGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | AGTTTAGGAAGACCCATGTATTCACACAGTTCCTGGAAGAAGATCTaGACAAAAATTCGACTAGACGATGTCGTGGTCTCTTCACTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SLGRPMYSHSSWKKI*TKIRLDDVVVSSLS Trigger: ACTGAGTGAAGAGACCACGACATCGTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATACATGGGTCTTCCTAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS TCA 72 bp | CTGGACAGCAATCCTCTCCCTCTGACAATGTTCTCTTaGAGGAGCTCTTGGATAATAATGCTTATATTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LDSNPLPLTMFS*RSSWIIMLILE Trigger: CTCTAATATAAGCATTATTATCCAAGAGCTCCTTCAAGAGAACATTGTCAGAGGGAGAGGATTGCTGTCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | AGGAGCTCTTGGATAATAATGCTTATATTAGAGATGTTGACCTTGTaGATGAGACCATTGATGGATTTCTTCAGAGCCTCCCAGCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: RSSWIIMLILEMLTL*MRPLMDFFRASQLI Trigger: GATGAGCTGGGAGGCTCTGAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCTAATATAAGCATTATTATCCAAGAGCTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CAA 90 bp | GGACAGCAATCCTCTCCCTCTGACAATGTTCTCTTGAAGGAGCTCTaGGATAATAATGCTTATATTAGAGATGTTGACCTTGTTGATGAG | + |
|
Preference number: 6 (lower is better) Translates to: GQQSSPSDNVLLKEL*DNNAYIRDVDLVDE Trigger: CTCATCAACAAGGTCAACATCTCTAATATAAGCATTATTATCCAAGAGCTCCTTCAAGAGAACATTGTCAGAGGGAGAGGATTGCTGTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS TCA 72 bp | TGCCACATTTTGGTTAATAAGATGTGCCACAAATTTTaGAGCAGTCAGGCAAAGTTGCTTATCGTTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: CHILVNKMCHKF*SSQAKLLIVPS Trigger: CGAAGGAACGATAAGCAACTTTGCCTGACTGCTTCAAAATTTGTGGCACATCTTATTAACCAAAATGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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| CDS CCA 72 bp | TTCAGTTTAGGAAGACCCATGTATTCACACAGTTCCTaGAAGAAGATCTTGACAAAAATTCGACTAGACGAT | + |
|
Preference number: 6 (lower is better) Translates to: FSLGRPMYSHSS*KKILTKIRLDD Trigger: ATCGTCTAGTCGAATTTTTGTCAAGATCTTCTTCCAGGAACTGTGTGAATACATGGGTCTTCCTAAACTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS CAA 90 bp | CTCAATTTGTTTGTCTCTAAGCGATGGATGGTGTCGTACTGTTCCTaGAATATACTTTCAAATGATTCCATGTATTCCTTTTTCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: LNLFVSKRWMVSYCS*NILSNDSMYSFFSI Trigger: TATGCTGAAAAAGGAATACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCATCGCTTAGAGACAAACAAATTGAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS TCA 72 bp | TTGTCTCTAAGCGATGGATGGTGTCGTACTGTTCCTTaGATATACTTTCAAATGATTCCATGTATTCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSLSDGWCRTVP*IYFQMIPCIPF Trigger: AAAAGGAATACATGGAATCATTTGAAAGTATATTCAAGGAACAGTACGACACCATCCATCGCTTAGAGACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS CCA 72 bp | TTAGCAACATTTCTCAATTTGTTTGTCTCTAAGCGATaGATGGTGTCGTACTGTTCCTTGAATATACTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LATFLNLFVSKR*MVSYCSLNILS Trigger: TGAAAGTATATTCAAGGAACAGTACGACACCATCCATCGCTTAGAGACAAACAAATTGAGAAATGTTGCTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
||
| CDS CAA 72 bp | AGGAGCTCTTGGATAATAATGCTTATATTAGAGATGTaGACCTTGTTGATGAGACCATTGATGGATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RSSWIIMLILEM*TLLMRPLMDFF Trigger: GAAGAAATCCATCAATGGTCTCATCAACAAGGTCAACATCTCTAATATAAGCATTATTATCCAAGAGCTCCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065889.10 ENSMUST00000111818.8 ENSMUST00000111819.8 ENSMUST00000111821.9 ENSMUST00000111824.8 |
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