Pregenerated sensors for CUZD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040205Ensembl transcript IDs: ENSMUST00000046611.9
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGATTTGAACATGATGGTACACATGTTGCTTTTTAGGCCTTCCTaGTTTATTCTGAACCCTTGTAGGCACAGGGAGCTGCTTCATCAG | + |
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Preference number: 1 (lower is better) Translates to: CDLNMMVHMLLFRPS*FILNPCRHRELLHQ Trigger: CTGATGAAGCAGCTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCATCATGTTCAAATCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| 3UTR TCA 72 bp | TACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTaGACCCTTGTAGGCACAGGGAGCTGCTTCATCAGG | + |
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Preference number: 3 (lower is better) Translates to: YTCCFLGLPGLF*TLVGTGSCFIR Trigger: CCTGATGAAGCAGCTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| 3UTR CCA 72 bp | AACATGATGGTACACATGTTGCTTTTTAGGCCTTCCTaGTTTATTCTGAACCCTTGTAGGCACAGGGAGCTG | + |
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Preference number: 3 (lower is better) Translates to: NMMVHMLLFRPS*FILNPCRHREL Trigger: CAGCTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCATCATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | GTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCGGCCGCAGAGTTGTTTaGGCAGGCCTGCCGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VGTGSCFIRHPGEDKRPFGRRVV*AGLPWW Trigger: CCACCACGGCAGGCCTGCTCAAACAACTCTGCGGCC...GAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | CCTTGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCGGGTCTCTCCCAGATTaGCCCCTCCCAGACTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: PCRHRELLHQAPRRRQEAGSLPD*PLPDWL Trigger: CAGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCC...GGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCTTGGGGAAACACCACCAGGCTTaGATCCGAGGTGTGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TGSCFIRHPGEDKRPFLGKHHQA*IRGVQG Trigger: ACCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTT...CCCCAAGAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR GCA 90 bp | GTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCTTCCCCACTTGTATGTaGCAGACACAATATGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VGTGSCFIRHPGEDKRPFFPTCM*QTQYAS Trigger: GCTGGCATATTGTGTCTGGCACATACAAGTGGGGAA...GAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | TGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTTTCACACCTGCTGCCTaGATCCAACTTGATGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: CRHRELLHQAPRRRQEAFFTPAA*IQLDVG Trigger: TCCTACATCAAGTTGGATCCAGGCAGCAGGTGTGAA...AAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | TGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTTTGCCCAGGACACTCTaGTTCTGTATGATGTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: CRHRELLHQAPRRRQEAFLPRTL*FCMMSS Trigger: AGACGACATCATACAGAACCAGAGTGTCCTGGGCAA...AAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | CCTTGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCGAAATGTCATCGAGTTaGATGATGATTCAAACACAG | + |
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Preference number: 4 (lower is better) Translates to: PCRHRELLHQAPRRRQEAEMSSS*MMIQTQ Trigger: CTGTGTTTGAATCATCATCCAACTCGATGACATTTC...GGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | GGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCTTGGGGTCCAATCGTGGATGTAAATTaGAGTGTAGGAAGCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GAASSGTQEKTRGLSWGPIVDVN*SVGSRK Trigger: TTTTCTGCTTCCTACACTTCAATTTACATCCACGAT...TGGACCCCAAGAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | ATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACAGGGAGCTCAGGGTGCGGCTTTaGATAATTGGGGCTGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: MLLFRPSWFILNPCRHRELRVRL*IIGAAE Trigger: TTCAGCAGCCCCAATTATCCAAAGCCGCACCCTGAG...CTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | TTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACAGGGAGCTGGTGTGCAAGGTGGCTTaGACAAAGAGAGTCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LLFRPSWFILNPCRHRELVCKVA*TKRVWF Trigger: GAACCAGACTCTCTTTGTCCAAGCCACCTTGCACAC...CAGCTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR GCA 90 bp | ATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACAGGGAGGTCGTAGGTTGGAGATaGAAAGTCAGACGTAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: MLLFRPSWFILNPCRHREVVGWR*KVRRRR Trigger: TCGCCTACGTCTGACTTTGCATCTCCAACCTACGAC...CTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | TTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACAGGGAGCTGACTGAGGGGCTGGTTTaGAATTTCTGCTTCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: LLFRPSWFILNPCRHRELTEGLV*NFCFMY Trigger: ATACATGAAGCAGAAATTTCAAACCAGCCCCTCAGT...CAGCTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | GTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACTTAGCGCAAGAACCATaGAGGAAAACAGGTACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VHMLLFRPSWFILNPCRHLAQEP*RKTGTG Trigger: GCCTGTACCTGTTTTCCTTCATGGTTCTTGCGCTAA...GTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | GTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACTTACAGGTCTCATCTTaGCAACATCCGCTGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: VHMLLFRPSWFILNPCRHLQVSS*QHPLLI Trigger: AATCAGCAGCGGATGTTGTCAAGATGAGACCTGTAA...GTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | GATTTGAACATGATGGTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGCTAGCAGAGGCCCACTaGTGGAGCTTCCATCAAACA | + |
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Preference number: 4 (lower is better) Translates to: DLNMMVHMLLFRPSWFILLAEAH*WSFHQT Trigger: TGTTTGATGGAAGCTCCACCAGTGGGCCTCTGCTAG...CAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCATCATGTTCAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | ATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACAGGGAGGAACTCTATGACATTTaGTACATTCGGTCTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: MLLFRPSWFILNPCRHREELYDI*YIRSAS Trigger: ACTTGCAGACCGAATGTATCAAATGTCATAGAGTTC...CTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | AGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATGTGCAGAGGCCCACTGGTaGAGCTTCCATCAAACACCT | + |
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Preference number: 4 (lower is better) Translates to: RRTIYSFQLFRNETHCRCAEAHW*SFHQTP Trigger: AGGTGTTTGATGGAAGCTCCACCAGTGGGCCTCTGC...ACATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | ATGGTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGATAGCACGACAGTCATaGCGTCAGAGGAAGATTCTA | + |
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Preference number: 4 (lower is better) Translates to: MVHMLLFRPSWFILNPCRIARQS*RQRKIL Trigger: TAGAATCTTCCTCTGACGCCATGACTGTCGTGCTAT...CCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | AGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATGTGATAATTGGGGCTGCTaGAGGACCCTTCCAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: RRTIYSFQLFRNETHCRCDNWGC*RTLPML Trigger: GAGCATTGGAAGGGTCCTTCAGCAGCCCCAATTATC...ACATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR GCA 90 bp | TTGAACATGATGGTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACGGGGCCATCGTAGACTaGGATGAAATCAAACTTGCA | + |
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Preference number: 4 (lower is better) Translates to: LNMMVHMLLFRPSWFILNGAIVD*DEIKLA Trigger: TGCAAGTTTGATTTCATCGCAGTCTACGATGGCCCC...GTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCATCATGTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR GCA 90 bp | ACCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGAGGCTGGTGTTGTATTTaGCCAGGACACTCTGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TRRTIYSFQLFRNETHCRGWCCI*PGHSGS Trigger: AGAACCAGAGTGTCCTGGGCAAATACAACACCAGCC...TCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | CCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATCATAGAGAGCCAGGCTaGTGTTGTATTTGCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: PDVLFIHFSYSVMKHTVDHREPG*CCICPG Trigger: TCCTGGGCAAATACAACACCAGCCTGGCTCTCTATG...ATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | GATTTGAACATGATGGTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGATCCCGTTTCCTTCTTaGGACACAGCCTTGATTGCA | + |
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Preference number: 4 (lower is better) Translates to: DLNMMVHMLLFRPSWFILIPFPS*DTALIA Trigger: TGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGAT...CAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCATCATGTTCAAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | ACCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGAAAGCCAGTGACTATCTaGAATGTCATCGAGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: TRRTIYSFQLFRNETHCRKPVTI*NVIELD Trigger: ATCCAACTCGATGACATTTCAGATAGTCACTGGCTT...TCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | CCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATCACTCTGGTTCTGTATaGTGTCGTCTTCAGTTATGT | + |
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Preference number: 4 (lower is better) Translates to: PDVLFIHFSYSVMKHTVDHSGSV*CRLQLC Trigger: ACATAACTGAAGACGACATCATACAGAACCAGAGTG...ATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR TCA 90 bp | CCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATGTCTACATAATATGGTaGCTCCTGTACGAGGTTTTC | + |
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Preference number: 4 (lower is better) Translates to: PDVLFIHFSYSVMKHTVDVYIIW*LLYEVF Trigger: GAAAACCTCGTACAGGAGTCACCATATTATGTAGAC...ATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CCA 90 bp | ACCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGAGATAAAGACACTCCTTaGGAACTTTGTCAAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: TRRTIYSFQLFRNETHCRDKDTP*ELCQAS Trigger: ACTGGCTTGACAAAGTTCCCAAGGAGTGTCTTTATC...TCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 90 bp | AGGGTGCGGCTTTGGATAATTGGGGCTGCTGAAGGACCCTTCCAATaGTCGCAGGTCACCACCGCAGTTTGGAATAACGGTAGCAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: RVRLWIIGAAEGPFQ*SQVTTAVWNNGSSG Trigger: TCCGCTGCTACCGTTATTCCAAACTGCGGTGGTGACCTGCGAGCATTGGAAGGGTCCTTCAGCAGCCCCAATTATCCAAAGCCGCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 90 bp | CACAATATGCCAGCTCAGGGTGCGGCTTTGGATAATTGGGGCTGCTaGAGGACCCTTCCAATGCTCGCAGGTCACCACCGCAGTTTGGAA | + |
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Preference number: 5 (lower is better) Translates to: HNMPAQGAALDNWGC*RTLPMLAGHHRSLE Trigger: TTCCAAACTGCGGTGGTGACCTGCGAGCATTGGAAGGGTCCTTCAGCAGCCCCAATTATCCAAAGCCGCACCCTGAGCTGGCATATTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | ACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCTTGGGGGGTGTGCAAGGTGGCTaGGACAAAGAGAGTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: TGSCFIRHPGEDKRPFLGGVQGG*DKESLV Trigger: AACCAGACTCTCTTTGTCCAAGCCACCTTGCACACC...CCCCAAGAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CCTTGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTATCCCGTTTCCTTCTaGGGACACAGCCTTGATTGC | + |
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Preference number: 5 (lower is better) Translates to: PCRHRELLHQAPRRRQEAYPVSF*GHSLDC Trigger: GCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATA...GGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 90 bp | ATCTCCACGGTAGAGTTATACTCCATCTCACAGGTCACCACGATCTaGAGGAGCTTCTGTCGGGTGATCACAGCAGAGACCGGAGACTCG | + |
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Preference number: 5 (lower is better) Translates to: ISTVELYSISQVTTI*RSFCRVITAETGDS Trigger: CGAGTCTCCGGTCTCTGCTGTGATCACCCGACAGAAGCTCCTCCAGATCGTGGTGACCTGTGAGATGGAGTATAACTCTACCGTGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 90 bp | AGACGTAGGCGAGGCTCTGCAAGTATCCAGAAACACCACCAGGCTTaGATCCGAGGTGTGCAAGGTGGCTTGGACAAAGAGAGTCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: RRRRGSASIQKHHQA*IRGVQGGLDKESLV Trigger: AACCAGACTCTCTTTGTCCAAGCCACCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTTCTGGATACTTGCAGAGCCTCGCCTACGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCTTGGGTCTTGGGACACAGCCTaGATTGCAGCGAGATGTTTG | + |
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Preference number: 5 (lower is better) Translates to: HRELLHQAPRRRQEAFLGSWDTA*IAARCL Trigger: CAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGA...CCCAAGAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | GTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCGTCCTGAATCTCTACTaGCACTTCGGTCCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: VGTGSCFIRHPGEDKRPFVLNLY*HFGPSS Trigger: TGAAGAGGGACCGAAGTGCAAGTAGAGATTCAGGAC...GAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCTTTCTTGGGATAGCCTTTCCCCACTaGTATGTGCCAGACACAATA | + |
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Preference number: 5 (lower is better) Translates to: HRELLHQAPRRRQEAFLGIAFPH*YVPDTI Trigger: TATTGTGTCTGGCACATACAAGTGGGGAAAGGCTAT...CCCAAGAAAGGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 90 bp | TCGAGTTGGATGATGATTCAAACACAGGCACGAAATCATTTCTGCTaGAGGCCTTCCCTAGCAGAGGCCCACTGGTGGAGCTTCCATCAA | + |
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Preference number: 5 (lower is better) Translates to: SSWMMIQTQARNHFC*RPSLAEAHWWSFHQ Trigger: TTGATGGAAGCTCCACCAGTGGGCCTCTGCTAGGGAAGGCCTGCAGCAGAAATGATTTCGTGCCTGTGTTTGAATCATCATCCAACTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 90 bp | TCATCGAGTTGGATGATGATTCAAACACAGGCACGAAATCATTTCTaGTGCAGGCCTTCCCTAGCAGAGGCCCACTGGTGGAGCTTCCAT | + |
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Preference number: 5 (lower is better) Translates to: SSSWMMIQTQARNHF*CRPSLAEAHWWSFH Trigger: ATGGAAGCTCCACCAGTGGGCCTCTGCTAGGGAAGGCCTGCAGCAGAAATGATTTCGTGCCTGTGTTTGAATCATCATCCAACTCGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CCTTGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCGCGATGAAATCAAACTaGCAGTTTTCATCCATCTCT | + |
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Preference number: 5 (lower is better) Translates to: PCRHRELLHQAPRRRQEAAMKSN*QFSSIS Trigger: AGAGATGGATGAAAACTGCAAGTTTGATTTCATCGC...GGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | ATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGCACAGGGAGGAAACACCACCAGGCTaGGATCCGAGGTGTGCAAGG | + |
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Preference number: 5 (lower is better) Translates to: MLLFRPSWFILNPCRHREETPPG*DPRCAR Trigger: CCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTTC...CTCCCTGTGCCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CCTTGTAGGCACAGGGAGCTGCTTCATCAGGCACCCAGGAGAAGACAAGAGGCCATTGCAGCGAGATGTTaGGTCATTGTTATCACATAT | + |
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Preference number: 5 (lower is better) Translates to: PCRHRELLHQAPRRRQEAIAARC*VIVITY Trigger: ATATGTGATAACAATGACCAAACATCTCGCTGCAAT...GGCCTCTTGTCTTCTCCTGGGTGCCTGATGAAGCAGCTCCCTGTGCCTACAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 90 bp | TTGTATCTTATAGCCTTTCCCCACTTGTATGTGCCAGACACAATATaGCAGCTCAGGGTGCGGCTTTGGATAATTGGGGCTGCTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: LYLIAFPHLYVPDTI*QLRVRLWIIGAAEG Trigger: TCCTTCAGCAGCCCCAATTATCCAAAGCCGCACCCTGAGCTGGCATATTGTGTCTGGCACATACAAGTGGGGAAAGGCTATAAGATACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | GATTTGAACATGATGGTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGTGGGTCTCTCCCAGATaGGCCCCTCCCAGACTGGCT | + |
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Preference number: 5 (lower is better) Translates to: DLNMMVHMLLFRPSWFILWVSPR*APPRLA Trigger: AGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCCA...CAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCATCATGTTCAAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 90 bp | TACAGGCGACTGAGGGGCTGGTTTGAAATTTCTGCTTCATGTATTTaGGGCAGAAGTCCTGAATCTCTACTTGCACTTCGGTCCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: YRRLRGWFEISASCI*GRSPESLLALRSLF Trigger: GAAGAGGGACCGAAGTGCAAGTAGAGATTCAGGACTTCTGCCTCAAATACATGAAGCAGAAATTTCAAACCAGCCCCTCAGTCGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 90 bp | AAGTATCCAGAAACACCACCAGGCTTGGATCCGAGGTGTGCAAGGTaGCTTGGACAAAGAGAGTCTGGTTCAAGTCTACATAATATGGTG | + |
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Preference number: 5 (lower is better) Translates to: KYPETPPGLDPRCAR*LGQRESGSSLHNMV Trigger: CACCATATTATGTAGACTTGAACCAGACTCTCTTTGTCCAAGCCACCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTTCTGGATACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | ATGGTACACATGTTGCTTTTTAGGCCTTCCTGGTTTATTCTGAACCCTTGTAGGGACTGGCTGTGCATCTaGATTTGCCTTCAGCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: MVHMLLFRPSWFILNPCRDWLCI*ICLQPL Trigger: CAGAGGCTGAAGGCAAATCAAGATGCACAGCCAGTC...CCTACAAGGGTTCAGAATAAACCAGGAAGGCCTAAAAAGCAACATGTGTACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 90 bp | AGAGTCAGTCTTCCATTTGTAGGAAGGAATATCCCGTTTCCTTCTTaGGACACAGCCTTGATTGCAGCGAGATGTTTGGTCATTGTTATC | + |
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Preference number: 5 (lower is better) Translates to: RVSLPFVGRNIPFPS*DTALIAARCLVIVI Trigger: GATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCCTACAAATGGAAGACTGACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 90 bp | GCTTCCATCAAACACCTTAATGTTTTCAGTTTCACACCTGCTGCCTaGATCCAACTTGATGTAGGAGAAGATGATTCTGATGCTCCTGTT | + |
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Preference number: 5 (lower is better) Translates to: ASIKHLNVFSFTPAA*IQLDVGEDDSDAPV Trigger: AACAGGAGCATCAGAATCATCTTCTCCTACATCAAGTTGGATCCAGGCAGCAGGTGTGAAACTGAAAACATTAAGGTGTTTGATGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 90 bp | AAGATAAAGACACTCCTTGGGAACTTTGTCAAGCCAGTGACTATCTaGAATGTCATCGAGTTGGATGATGATTCAAACACAGGCACGAAA | + |
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Preference number: 5 (lower is better) Translates to: KIKTLLGNFVKPVTI*NVIELDDDSNTGTK Trigger: TTTCGTGCCTGTGTTTGAATCATCATCCAACTCGATGACATTTCAGATAGTCACTGGCTTGACAAAGTTCCCAAGGAGTGTCTTTATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 90 bp | TGTAGGAAGGAATATCCCGTTTCCTTCTTGGGACACAGCCTTGATTaGAGCGAGATGTTTGGTCATTGTTATCACATATCAAAATCTTAC | + |
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Preference number: 5 (lower is better) Translates to: CRKEYPVSFLGHSLD*SEMFGHCYHISKSY Trigger: GTAAGATTTTGATATGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATGCCGGTAGGTATGATTaGCTTATGATGACTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: PDVLFIHFSYSVMKHTVDAGRYD*LMMTLI Trigger: GATGAGAGTCATCATAAGCAAATCATACCTACCGGC...ATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS-3UTR CAA 90 bp | CCAGACGTACTATTTATTCATTTCAGCTATTCCGTAATGAAACACACTGTCGATCATCGTGGATGTAAATaGAAGTGTAGGAAGCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PDVLFIHFSYSVMKHTVDHRGCK*KCRKQK Trigger: TTTCTGCTTCCTACACTTCAATTTACATCCACGATG...ATCGACAGTGTGTTTCATTACGGAATAGCTGAAATGAATAAATAGTACGTCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 72 bp | AGGCTTCCCACGGCCGCAGAGTTGTTTGAGCAGGCCTaGCGTGGTGGAGGGGCCATCGTAGACTGCGATGAA | + |
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Preference number: 6 (lower is better) Translates to: RLPTAAELFEQA*RGGGAIVDCDE Trigger: TTCATCGCAGTCTACGATGGCCCCTCCACCACGGCAGGCCTGCTCAAACAACTCTGCGGCCGTGGGAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 72 bp | CCAGCTCAGGGTGCGGCTTTGGATAATTGGGGCTGCTaGAGGACCCTTCCAATGCTCGCAGGTCACCACCGC | + |
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Preference number: 6 (lower is better) Translates to: PAQGAALDNWGC*RTLPMLAGHHR Trigger: GCGGTGGTGACCTGCGAGCATTGGAAGGGTCCTTCAGCAGCCCCAATTATCCAAAGCCGCACCCTGAGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 90 bp | TTCGCACTGAGCTGTAGGACCAGGGCTTTATGGGTCTCTCCCAGATaGGCCCCTCCCAGACTGGCTGTGCATCTTGATTTGCCTTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FALSCRTRALWVSPR*APPRLAVHLDLPSA Trigger: GGCTGAAGGCAAATCAAGATGCACAGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCCATAAAGCCCTGGTCCTACAGCTCAGTGCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | GCTGTAGGACCAGGGCTTTATGGGTCTCTCCCAGATTaGCCCCTCCCAGACTGGCTGTGCATCTTGATTTGC | + |
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Preference number: 6 (lower is better) Translates to: AVGPGLYGSLPD*PLPDWLCILIC Trigger: GCAAATCAAGATGCACAGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCCATAAAGCCCTGGTCCTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | TTCTCATTCGCACTGAGCTGTAGGACCAGGGCTTTATaGGTCTCTCCCAGATTGGCCCCTCCCAGACTGGCT | + |
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Preference number: 6 (lower is better) Translates to: FSFALSCRTRAL*VSPRLAPPRLA Trigger: AGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCCATAAAGCCCTGGTCCTACAGCTCAGTGCGAATGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | GTGCCAGACACAATATGCCAGCTCAGGGTGCGGCTTTaGATAATTGGGGCTGCTGAAGGACCCTTCCAATGC | + |
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Preference number: 6 (lower is better) Translates to: VPDTICQLRVRL*IIGAAEGPFQC Trigger: GCATTGGAAGGGTCCTTCAGCAGCCCCAATTATCCAAAGCCGCACCCTGAGCTGGCATATTGTGTCTGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | CGAGGCTCTGCAAGTATCCAGAAACACCACCAGGCTTaGATCCGAGGTGTGCAAGGTGGCTTGGACAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RGSASIQKHHQA*IRGVQGGLDKE Trigger: CTCTTTGTCCAAGCCACCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTTCTGGATACTTGCAGAGCCTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 72 bp | AGCTGTAGGACCAGGGCTTTATGGGTCTCTCCCAGATaGGCCCCTCCCAGACTGGCTGTGCATCTTGATTTG | + |
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Preference number: 6 (lower is better) Translates to: SCRTRALWVSPR*APPRLAVHLDL Trigger: CAAATCAAGATGCACAGCCAGTCTGGGAGGGGCCAATCTGGGAGAGACCCATAAAGCCCTGGTCCTACAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 72 bp | TCCCAGATTGGCCCCTCCCAGACTGGCTGTGCATCTTaGTTTGCCTTCAGCCTCTGTAGAATTCAGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: SQIGPSQTGCAS*FAFSLCRIQLC Trigger: GCACAGCTGAATTCTACAGAGGCTGAAGGCAAATCAAGATGCACAGCCAGTCTGGGAGGGGCCAATCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 72 bp | GAGCAGGCCTGCCGTGGTGGAGGGGCCATCGTAGACTaGGATGAAATCAAACTTGCAGTTTTCATCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: EQACRGGGAIVD*DEIKLAVFIHL Trigger: GAGATGGATGAAAACTGCAAGTTTGATTTCATCGCAGTCTACGATGGCCCCTCCACCACGGCAGGCCTGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 72 bp | AGATTGGCCCCTCCCAGACTGGCTGTGCATCTTGATTaGCCTTCAGCCTCTGTAGAATTCAGCTGTGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: RLAPPRLAVHLD*PSASVEFSCAP Trigger: TGGGGCACAGCTGAATTCTACAGAGGCTGAAGGCAAATCAAGATGCACAGCCAGTCTGGGAGGGGCCAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 72 bp | ATGATGATTCAAACACAGGCACGAAATCATTTCTGCTaGAGGCCTTCCCTAGCAGAGGCCCACTGGTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: MMIQTQARNHFC*RPSLAEAHWWS Trigger: GCTCCACCAGTGGGCCTCTGCTAGGGAAGGCCTGCAGCAGAAATGATTTCGTGCCTGTGTTTGAATCATCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 72 bp | CTTTGGATAATTGGGGCTGCTGAAGGACCCTTCCAATaGTCGCAGGTCACCACCGCAGTTTGGAATAACGGT | + |
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Preference number: 6 (lower is better) Translates to: LWIIGAAEGPFQ*SQVTTAVWNNG Trigger: ACCGTTATTCCAAACTGCGGTGGTGACCTGCGAGCATTGGAAGGGTCCTTCAGCAGCCCCAATTATCCAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | GTAGAGTTATACTCCATCTCACAGGTCACCACGATCTaGAGGAGCTTCTGTCGGGTGATCACAGCAGAGACC | + |
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Preference number: 6 (lower is better) Translates to: VELYSISQVTTI*RSFCRVITAET Trigger: GGTCTCTGCTGTGATCACCCGACAGAAGCTCCTCCAGATCGTGGTGACCTGTGAGATGGAGTATAACTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 72 bp | ATAGCCTTTCCCCACTTGTATGTGCCAGACACAATATaGCAGCTCAGGGTGCGGCTTTGGATAATTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: IAFPHLYVPDTI*QLRVRLWIIGA Trigger: AGCCCCAATTATCCAAAGCCGCACCCTGAGCTGGCATATTGTGTCTGGCACATACAAGTGGGGAAAGGCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | GAAACACCACCAGGCTTGGATCCGAGGTGTGCAAGGTaGCTTGGACAAAGAGAGTCTGGTTCAAGTCTACAT | + |
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Preference number: 6 (lower is better) Translates to: ETPPGLDPRCAR*LGQRESGSSLH Trigger: ATGTAGACTTGAACCAGACTCTCTTTGTCCAAGCCACCTTGCACACCTCGGATCCAAGCCTGGTGGTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 72 bp | CACCACCAGGCTTGGATCCGAGGTGTGCAAGGTGGCTaGGACAAAGAGAGTCTGGTTCAAGTCTACATAATA | + |
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Preference number: 6 (lower is better) Translates to: HHQAWIRGVQGG*DKESLVQVYII Trigger: TATTATGTAGACTTGAACCAGACTCTCTTTGTCCAAGCCACCTTGCACACCTCGGATCCAAGCCTGGTGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | GGTTTTCAAATGAGTCGGACTCATAGAGAGCCAGGCTaGTGTTGTATTTGCCCAGGACACTCTGGTTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GFQMSRTHREPG*CCICPGHSGSV Trigger: TACAGAACCAGAGTGTCCTGGGCAAATACAACACCAGCCTGGCTCTCTATGAGTCCGACTCATTTGAAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | CTTCCATTTGTAGGAAGGAATATCCCGTTTCCTTCTTaGGACACAGCCTTGATTGCAGCGAGATGTTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LPFVGRNIPFPS*DTALIAARCLV Trigger: GACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCCTACAAATGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 72 bp | CTGAGGGGCTGGTTTGAAATTTCTGCTTCATGTATTTaGGGCAGAAGTCCTGAATCTCTACTTGCACTTCGG | + |
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Preference number: 6 (lower is better) Translates to: LRGWFEISASCI*GRSPESLLALR Trigger: CCGAAGTGCAAGTAGAGATTCAGGACTTCTGCCTCAAATACATGAAGCAGAAATTTCAAACCAGCCCCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CCA 72 bp | AGAGCCAGGCTGGTGTTGTATTTGCCCAGGACACTCTaGTTCTGTATGATGTCGTCTTCAGTTATGTACATA | + |
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Preference number: 6 (lower is better) Translates to: RARLVLYLPRTL*FCMMSSSVMYI Trigger: TATGTACATAACTGAAGACGACATCATACAGAACCAGAGTGTCCTGGGCAAATACAACACCAGCCTGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 72 bp | GGAAGGAATATCCCGTTTCCTTCTTGGGACACAGCCTaGATTGCAGCGAGATGTTTGGTCATTGTTATCACA | + |
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Preference number: 6 (lower is better) Translates to: GRNIPFPSWDTA*IAARCLVIVIT Trigger: TGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 90 bp | CAGAGTCAGTCTTCCATTTGTAGGAAGGAATATCCCGTTTCCTTCTaGGGACACAGCCTTGATTGCAGCGAGATGTTTGGTCATTGTTAT | + |
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Preference number: 6 (lower is better) Translates to: QSQSSICRKEYPVSF*GHSLDCSEMFGHCY Trigger: ATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCCTACAAATGGAAGACTGACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 72 bp | GAAGGAATATCCCGTTTCCTTCTTGGGACACAGCCTTaGTTGCAGCGAGATGTTTGGTCATTGTTATCACAT | + |
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Preference number: 6 (lower is better) Translates to: EGISRFLLGTQP*LQRDVWSLLSH Trigger: ATGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS GCA 72 bp | GAATATCCCGTTTCCTTCTTGGGACACAGCCTTGATTaGAGCGAGATGTTTGGTCATTGTTATCACATATCA | + |
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Preference number: 6 (lower is better) Translates to: EYPVSFLGHSLD*SEMFGHCYHIS Trigger: TGATATGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS TCA 72 bp | ACACTCCTTGGGAACTTTGTCAAGCCAGTGACTATCTaGAATGTCATCGAGTTGGATGATGATTCAAACACA | + |
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Preference number: 6 (lower is better) Translates to: TLLGNFVKPVTI*NVIELDDDSNT Trigger: TGTGTTTGAATCATCATCCAACTCGATGACATTTCAGATAGTCACTGGCTTGACAAAGTTCCCAAGGAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 90 bp | ATCCCGTTTCCTTCTTGGGACACAGCCTTGATTGCAGCGAGATGTTaGGTCATTGTTATCACATATCAAAATCTTACACTTGAGATACAC | + |
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Preference number: 6 (lower is better) Translates to: IPFPSWDTALIAARC*VIVITYQNLTLEIH Trigger: GTGTATCTCAAGTGTAAGATTTTGATATGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 90 bp | CCATTTGTAGGAAGGAATATCCCGTTTCCTTCTTGGGACACAGCCTaGATTGCAGCGAGATGTTTGGTCATTGTTATCACATATCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: PFVGRNIPFPSWDTA*IAARCLVIVITYQN Trigger: ATTTTGATATGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGGAAACGGGATATTCCTTCCTACAAATGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 72 bp | GCCGGTAGGTATGATTTGCTTATGATGACTCTCATCTaGTCAGAAACACAACTTAGAGATGTAGTGTTGACA | + |
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Preference number: 6 (lower is better) Translates to: AGRYDLLMMTLI*SETQLRDVVLT Trigger: TGTCAACACTACATCTCTAAGTTGTGTTTCTGACAAGATGAGAGTCATCATAAGCAAATCATACCTACCGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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| CDS CAA 72 bp | CCTTCTTGGGACACAGCCTTGATTGCAGCGAGATGTTaGGTCATTGTTATCACATATCAAAATCTTACACTT | + |
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Preference number: 6 (lower is better) Translates to: PSWDTALIAARC*VIVITYQNLTL Trigger: AAGTGTAAGATTTTGATATGTGATAACAATGACCAAACATCTCGCTGCAATCAAGGCTGTGTCCCAAGAAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046611.9 |
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