Pregenerated sensors for CUX2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042589Ensembl transcript IDs: ENSMUST00000086317.12, ENSMUST00000111752.10, ENSMUST00000134326.2, ENSMUST00000154139.8, ENSMUST00000168288.9
Found 656 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGTTTCTGGACTCTCGAACGGTCTGAGGCACGGCATGTCGCTCTaGTTCATCGGTGAGTGGCGGCTGAGGCACGGGGCAAGTAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: EVSGLSNGLRHGMSL*FIGEWRLRHGASSP Trigger: GGGGCTACTTGCCCCGTGCCTCAGCCGCCACTCACCGATGAACCAGAGCGACATGCCGTGCCTCAGACCGTTCGAGAGTCCAGAAACCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR TCA 90 bp | CTCTCAGAACTGGTGCTGGTGTGGAAGCCAGACATTCTGGCTCCTTaGCTCAGAGATACCTGGGCTTGCCTGCAAGGTCACCTTCCCGGG | + |
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Preference number: 1 (lower is better) Translates to: LSELVLVWKPDILAP*LRDTWACLQGHLPG Trigger: CCCGGGAAGGTGACCTTGCAGGCAAGCCCAGGTATCTCTGAGTCAAGGAGCCAGAATGTCTGGCTTCCACACCAGCACCAGTTCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR GCA 90 bp | GAGCAGCCGGGACCCCGCACTCCATCACCAAGCAGATCATACAGATaGCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAA | + |
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Preference number: 1 (lower is better) Translates to: EQPGPRTPSPSRSYR*HGQRRSLFSWLLSQ Trigger: TTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGGGTCCCGGCTGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | TCGCTAAGGGCAACATCTCTACCAGCACTAGGACCTCCTGTGATGTaGAGGAGGCAGACAGCCCTCCAGCACTGTCCCATCCTTAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SLRATSLPALGPPVM*RRQTALQHCPILSS Trigger: GCTGCTAAGGATGGGACAGTGCTGGAGGGCTGTCTGCCTCCTCCACATCACAGGAGGTCCTAGTGCTGGTAGAGATGTTGCCCTTAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | GCCGGGACCCCGCACTCCATCACCAAGCAGATCATACAGATGCCATaGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAACAGAT | + |
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Preference number: 1 (lower is better) Translates to: AGTPHSITKQIIQMP*AKEVTLQLAVVATD Trigger: ATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGGGTCCCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR GCA 90 bp | GTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTTaGCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGA | + |
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Preference number: 1 (lower is better) Translates to: VNGLTLLSTSAWLSS*LSGPHHIWEREGGR Trigger: TCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR GCA 90 bp | TGGGTTATCTTGGACAAAGTCCATTCTGCCCTGCCCTATTGCTCTTaGGTCTTGGGGGTTGCCTCAGCTGTGTTGCCCAGGCTACTTCTC | + |
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Preference number: 1 (lower is better) Translates to: WVILDKVHSALPYCS*VLGVASAVLPRLLL Trigger: GAGAAGTAGCCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAGATAACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | ACATGTAGCTCTCAGAACTGGTGCTGGTGTGGAAGCCAGACATTCTaGCTCCTTGACTCAGAGATACCTGGGCTTGCCTGCAAGGTCACC | + |
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Preference number: 1 (lower is better) Translates to: TCSSQNWCWCGSQTF*LLDSEIPGLACKVT Trigger: GGTGACCTTGCAGGCAAGCCCAGGTATCTCTGAGTCAAGGAGCCAGAATGTCTGGCTTCCACACCAGCACCAGTTCTGAGAGCTACATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR GCA 90 bp | AAGCTCCTGATTCAGGCACTTCACAGGTGTACCCATGCCCCAGGATaGACCCTGAGTCACAACTGTAACACCCCACTTGACAGATGTGGA | + |
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Preference number: 1 (lower is better) Translates to: KLLIQALHRCTHAPG*TLSHNCNTPLDRCG Trigger: TCCACATCTGTCAAGTGGGGTGTTACAGTTGTGACTCAGGGTGCATCCTGGGGCATGGGTACACCTGTGAAGTGCCTGAATCAGGAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR GCA 90 bp | CAAAGTCCATTCTGCCCTGCCCTATTGCTCTTGCGTCTTGGGGGTTaGCTCAGCTGTGTTGCCCAGGCTACTTCTCAAATGACTAGACTC | + |
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Preference number: 1 (lower is better) Translates to: QSPFCPALLLLRLGG*LSCVAQATSQMTRL Trigger: GAGTCTAGTCATTTGAGAAGTAGCCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | TCTTGGACAAAGTCCATTCTGCCCTGCCCTATTGCTCTTGCGTCTTaGGGGTTGCCTCAGCTGTGTTGCCCAGGCTACTTCTCAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: SWTKSILPCPIALAS*GLPQLCCPGYFSND Trigger: GTCATTTGAGAAGTAGCCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | GAGAGAGCTTTAGGCACTCTCTCACTGACATGTAGCTCTCAGAACTaGTGCTGGTGTGGAAGCCAGACATTCTGGCTCCTTGACTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: ERALGTLSLTCSSQN*CWCGSQTFWLLDSE Trigger: CTCTGAGTCAAGGAGCCAGAATGTCTGGCTTCCACACCAGCACCAGTTCTGAGAGCTACATGTCAGTGAGAGAGTGCCTAAAGCTCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR TCA 90 bp | GGAACCCACATAATGAAAGAGGACCACCTCTGGCAAGTTGTCCTCTaGTCTTCACACGCGTGTCCATGCTCACACACCACACACCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: GTHIMKEDHLWQVVL*SSHACPCSHTTHPN Trigger: ATTTGGGTGTGTGGTGTGTGAGCATGGACACGCGTGTGAAGATCAGAGGACAACTTGCCAGAGGTGGTCCTCTTTCATTATGTGGGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR GCA 90 bp | GGAACCTTTGTCGCTGGAGATCACAATCAGGATGCTGGAAGAGATTaGTTCTGTGTTAGGGGAGGCCCTATCTTCAATCCCAAGCAGATC | + |
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Preference number: 1 (lower is better) Translates to: GTFVAGDHNQDAGRD*FCVRGGPIFNPKQI Trigger: GATCTGCTTGGGATTGAAGATAGGGCCTCCCCTAACACAGAAGCAATCTCTTCCAGCATCCTGATTGTGATCTCCAGCGACAAAGGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR GCA 90 bp | AGAGCTTTAGGCACTCTCTCACTGACATGTAGCTCTCAGAACTGGTaGTGGTGTGGAAGCCAGACATTCTGGCTCCTTGACTCAGAGATA | + |
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Preference number: 1 (lower is better) Translates to: RALGTLSLTCSSQNW*WCGSQTFWLLDSEI Trigger: TATCTCTGAGTCAAGGAGCCAGAATGTCTGGCTTCCACACCAGCACCAGTTCTGAGAGCTACATGTCAGTGAGAGAGTGCCTAAAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | GCAGATCTTGTGCAGAAAAAGAGAACAGACCAAGAGACAGGGATATaGTGGCTGTGCTGTGGTGATGTTAGCCGTACCAAGTTCCGCAGA | + |
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Preference number: 1 (lower is better) Translates to: ADLVQKKRTDQETGI*WLCCGDVSRTKFRR Trigger: TCTGCGGAACTTGGTACGGCTAACATCACCACAGCACAGCCACCATATCCCTGTCTCTTGGTCTGTTCTCTTTTTCTGCACAAGATCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | ACTGTCCCATCCTTAGCAGCACCCAGGTTTTCATTTAGAGTCTTTTaGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGGCATA | + |
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Preference number: 1 (lower is better) Translates to: TVPSLAAPRFSFRVF*TFSLQHRLWKGTGI Trigger: TATGCCAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATGAAAACCTGGGTGCTGCTAAGGATGGGACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | CCACAGCTTTCTGAAGGTTCTGGAGACATGTTGTCTGTACTCATTTaGGATAGAAGGCTTCCAACTCAGGGAGTGGAGGCCTTTGTGATA | + |
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Preference number: 1 (lower is better) Translates to: PQLSEGSGDMLSVLI*DRRLPTQGVEAFVI Trigger: TATCACAAAGGCCTCCACTCCCTGAGTTGGAAGCCTTCTATCCCAAATGAGTACAGACAACATGTCTCCAGAACCTTCAGAAAGCTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | CTTGCCCTTTCTGGAAACAAGGAAGATGGAAGCCACAGTGTTCTCTaGAGTGAAGTACCTGGCTCAGATCATAGGAGAAGCCTTCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: LALSGNKEDGSHSVL*SEVPGSDHRRSLLS Trigger: ACTTAGAAGGCTTCTCCTATGATCTGAGCCAGGTACTTCACTCCAGAGAACACTGTGGCTTCCATCTTCCTTGTTTCCAGAAAGGGCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR TCA 90 bp | ACCCTGAGTCACAACTGTAACACCCCACTTGACAGATGTGGAAACTaGGACCTGCATTACACAGCTGAGAATGAGCAGTGCTACCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: TLSHNCNTPLDRCGN*DLHYTAENEQCYLL Trigger: TAAAAGGTAGCACTGCTCATTCTCAGCTGTGTAATGCAGGTCTCAGTTTCCACATCTGTCAAGTGGGGTGTTACAGTTGTGACTCAGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CCA 90 bp | AAAAGCTGGAGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATaGGAACCTTTGTCGCTGGAGATCACAATCAGGATGCTGGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: KSWRFKGRYRGCLIQ*EPLSLEITIRMLEE Trigger: CTCTTCCAGCATCCTGATTGTGATCTCCAGCGACAAAGGTTCCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCTCCAGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR TCA 90 bp | AGGACACAACTTCTGTGTCTGCTCCACGACAGCAGTGACAGCATCTaGCTTTATAACTCTCTAATATCAAAACAGCATCGGCTGGGGATA | + |
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Preference number: 1 (lower is better) Translates to: RTQLLCLLHDSSDSI*LYNSLISKQHRLGI Trigger: TATCCCCAGCCGATGCTGTTTTGATATTAGAGAGTTATAAAGTCAGATGCTGTCACTGCTGTCGTGGAGCAGACACAGAAGTTGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGGAGAGAGGGAAGGTaGCCTCTGGGGCTATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FLALPSHRGEDEGRIPAPGREGR*PLGLCP Trigger: GGGACATAGCCCCAGAGGTCACCTTCCCTCTCTCCC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGACCCCACCACATCTaGGAGAGGGAGGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: FLALPSHRGEDEGRIPAPGPHHI*EREGGR Trigger: TCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR TCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGGGAGAGAGGGAAGGTaGCCTCTGGGGCTATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNGREGR*PLGLCP Trigger: GGGACATAGCCCCAGAGGTCACCTTCCCTCTCTCCC...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGCAGAGGCAGGCAGATCTTTCTGAGTTCCAGGCCAGCCAGAGCTTTAAAGCCACAGGGGCGAGGATaGGGGCAGGATTCCAGCGCC | + |
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Preference number: 2 (lower is better) Translates to: GGRGRQIFLSSRPARALKPQGRG*GQDSSA Trigger: GGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGG...CTTTAAAGCTCTGGCTGGCCTGGAACTCAGAAAGATCTGCCTGCCTCTGCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGGACCCCACCACATCTaGGAGAGGGAGGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SYEQGHQKEEAAASAHTQGPHHI*EREGGR Trigger: TCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR CCA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCGGACCCCACCACATCTaGGAGAGGGAGGGAGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: HQADHTDAMGKGGHSSAGGPHHI*EREGGR Trigger: TCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCC...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCTTTGTTGTCCACATCTaGATGGCTGAGTTCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: PFWPCLPTGARMRAGFQRFVVHI*MAEFLP Trigger: AGGCAAGAACTCAGCCATGCAGATGTGGACAACAAA...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTTTGTCCACATCTGCATaGCTGAGTTCTTGCCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: SSASYEQGHQKEEAAASALSTSA*LSSCLS Trigger: AGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAA...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR CAA 90 bp | CGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTaGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RKRLNFVVHICMAEF*PLWTPPHLGEGGRE Trigger: CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR GCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATTTGTTGTCCACATCTaGATGGCTGAGTTCTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: QRLLRAGPSERRGGGICSFVVHI*MAEFLP Trigger: AGGCAAGAACTCAGCCATGCAGATGTGGACAACAAA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR GCA 90 bp | GGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCACTAGGGTACCTTTTTGGCCCTaGCTTCCCACAGGGGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGLCDTTFAKGNISTSTRVPFWP*LPTGAR Trigger: CCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTAC...CCTAGTGCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 90 bp | GTGGGTTATCTTGGACAAAGTCCATTCTGCCCTGCCCTATTGCTCTaGCGTCTTGGGGGTTGCCTCAGCTGTGTTGCCCAGGCTACTTCT | + |
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Preference number: 2 (lower is better) Translates to: VGYLGQSPFCPALLL*RLGGCLSCVAQATS Trigger: AGAAGTAGCCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAGATAACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGGCTACGGCGGACTAATGCTTGCCCTTTCTGGAAACAAGGAAGATGGAAGCTTGCAACACAGGCTCTaGAAGGGCACTGGCATAGTG | + |
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Preference number: 2 (lower is better) Translates to: GGYGGLMLALSGNKEDGSLQHRL*KGTGIV Trigger: CACTATGCCAGTGCCCTTCCAGAGCCTGTGTTGCAA...GCTTCCATCTTCCTTGTTTCCAGAAAGGGCAAGCATTAGTCCGCCGTAGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR TCA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCCCTGGACTGGGTGCATaGGAGTTCAAAGTTCCGGAA | + |
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Preference number: 2 (lower is better) Translates to: HQADHTDAMGKGGHSSAGPGLGA*EFKVPE Trigger: TTCCGGAACTTTGAACTCTCATGCACCCAGTCCAGG...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTGCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATATGGCTGGCAAGCTCCTaGTTCAGGCACTTCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: RSADLGPEWPVPSNLKFIWLASS*FRHFTG Trigger: ACCTGTGAAGTGCCTGAATCAGGAGCTTGCCAGCCA...TATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGCACTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 90 bp | GCCGCAGTGAATTCTGCTGAGCCGCATCTCTGTATGTGTCGTACATaGACTCAATGTGGCATTTCAAGGCAGAAAGAGACGTGGTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: AAVNSAEPHLCMCRT*TQCGISRQKETWSP Trigger: GGGAGACCACGTCTCTTTCTGCCTTGAAATGCCACATTGAGTCAATGTACGACACATACAGAGATGCGGCTCAGCAGAATTCACTGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR TCA 90 bp | CCCGCACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACAAAGGCAGTATTTTCTaGGCATGGTGGAACATGCCT | + |
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Preference number: 2 (lower is better) Translates to: PALHHQADHTDAMGKGGHKGSIF*AWWNMP Trigger: AGGCATGTTCCACCATGCTCAGAAAATACTGCCTTT...GTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCGAGAAGCCTTCTAAGTaGAGCCACAATTCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: HQADHTDAMGKGGHSSAGEKPSK*SHNSGW Trigger: CCATCCTGAATTGTGGCTGCACTTAGAAGGCTTCTC...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR GCA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCCGGCGGACTAATGCTTaGCCTTTCTGGAAACAAGGA | + |
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Preference number: 2 (lower is better) Translates to: ADLGPEWPVPSNLKFIATRRTNA*PFWKQG Trigger: TCCTTGTTTCCAGAAAGGGCAAGCATTAGTCCGCCG...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR GCA 90 bp | CAGCTCTCGGGCCACACTACAGAGGACAGAGTTTCAAGTCCCCTGCTGCCTTCATGGAAAACTTCTCAATaGATAGCCAGGATTATGGTG | + |
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Preference number: 2 (lower is better) Translates to: QLSGHTTEDRVSSPLLPSWKTSQ*IARIMV Trigger: CACCATAATCCTGGCTATGCATTGAGAAGTTTTCCA...TGAAGGCAGCAGGGGACTTGAAACTCTGTCCTCTGTAGTGTGGCCCGAGAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR-3UTR TCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAGGGAGAGAGGGAAGGTaGCCTCTGGGGCTATGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TSDTTINVNGLTLLSTSAGREGR*PLGLCP Trigger: GGGACATAGCCCCAGAGGTCACCTTCCCTCTCTCCC...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR-3UTR CCA 90 bp | GTTTATAGCTACCAGGTAAGGAAATATATAGCCATCCCCACCTTACAGCTGGGGCAAGAGACAGGGATATaGTGGCTGTGCTGTGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: VYSYQVRKYIAIPTLQLGQETGI*WLCCGD Trigger: ATCACCACAGCACAGCCACCATATCCCTGTCTCTTG...CCCCAGCTGTAAGGTGGGGATGGCTATATATTTCCTTACCTGGTAGCTATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 90 bp | AGGATTATGGTGTGGAAAAGGAGGTTTTCCAGGGCCTGTTTGATGTaGATCATCTGTAGCCTGGACTGGGTGCATGAGAGTTCAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: RIMVWKRRFSRACLM*IICSLDWVHESSKF Trigger: GAACTTTGAACTCTCATGCACCCAGTCCAGGCTACAGATGATCAACATCAAACAGGCCCTGGAAAACCTCCTTTTCCACACCATAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGTGCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATATCACAATCAGGATGCTaGAAGAGATTGCTTCTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: RSADLGPEWPVPSNLKFISQSGC*KRLLLC Trigger: ACACAGAAGCAATCTCTTCCAGCATCCTGATTGTGA...TATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGCACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CCA 90 bp | GTTTATAGCTACCAGGTAAGGAAATATATAGCCATCCCCACCTTACAGCTGGGGGCCAGGATTATGGTGTaGAAAAGGAGGTTTTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VYSYQVRKYIAIPTLQLGARIMV*KRRFSR Trigger: CCTGGAAAACCTCCTTTTCCACACCATAATCCTGGC...CCCCAGCTGTAAGGTGGGGATGGCTATATATTTCCTTACCTGGTAGCTATAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CAA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTaGTCCACATCTGCATGGCTGAGTTCTTGCCTCTCTGGACCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QVTSDTTINVNGLTL*STSAWLSSCLSGPH Trigger: GTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR CAA 90 bp | AGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATGGGAACCTTaGTCGCTGGAGATCACAATCAGGATGCTGGAAGAGATTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: RFKGRYRGCLIQWEP*SLEITIRMLEEIAS Trigger: AGAAGCAATCTCTTCCAGCATCCTGATTGTGATCTCCAGCGACAAAGGTTCCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CAA 90 bp | CAACGCTCCAGGAACACACGCCCATATTTGAACACCAGCACTCAATaGGAAAGGCAGTATTTTCTGAGCATGGTGGAACATGCCTATAAT | + |
|
Preference number: 2 (lower is better) Translates to: QRSRNTRPYLNTSTQ*ERQYFLSMVEHAYN Trigger: ATTATAGGCATGTTCCACCATGCTCAGAAAATACTGCCTTTCCAATTGAGTGCTGGTGTTCAAATATGGGCGTGTGTTCCTGGAGCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAACAGATCATTACATTGACTCAATGTaGCATTTCAAGGCAGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: MPWAKEVTLQLAVVATDHYIDSM*HFKAER Trigger: TCTTTCTGCCTTGAAATGCCACATTGAGTCAATGTA...ATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CAA 90 bp | CTTCAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTaGTTGTCCACATCTGCATGGCTGAGTTCTTGCCTCTCTGGACCC | + |
|
Preference number: 2 (lower is better) Translates to: LQVTSDTTINVNGLT*LSTSAWLSSCLSGP Trigger: GGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR-3UTR TCA 90 bp | CATTTAGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGAGCAGTGACAGCATCTaGCTTTATAACTCTCTAATA | + |
|
Preference number: 2 (lower is better) Translates to: HLESFGLSLCNTGSGRALSSDSI*LYNSLI Trigger: TATTAGAGAGTTATAAAGTCAGATGCTGTCACTGCT...CAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | GGACTCTCGAACGGTCTGAGGCACGGCATGTCGCTCTaGTTCATCGGTGAGTGGCGGCTGAGGCACGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GLSNGLRHGMSL*FIGEWRLRHGA Trigger: TGCCCCGTGCCTCAGCCGCCACTCACCGATGAACCAGAGCGACATGCCGTGCCTCAGACCGTTCGAGAGTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCTGCATGGCTGAGTTCTaGCCTCTCTGGACCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: SHRGEDEGRIPAPPTSRACMAEF*PLWTPP Trigger: TGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCA...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR GCA 72 bp | CGGGCCACACTACAGAGGACAGAGTTTCAAGTCCCCTaGTGCCTTCAGAGCAGCCGGGACCCCGCACTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RATLQRTEFQVP*CLQSSRDPALH Trigger: ATGGAGTGCGGGGTCCCGGCTGCTCTGAAGGCAGCAGGGGACTTGAAACTCTGTCCTCTGTAGTGTGGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | GCCACACTACAGAGGACAGAGTTTCAAGTCCCCTGCTaGCTTCAGAGCAGCCGGGACCCCGCACTCCATCAC | + |
|
Preference number: 3 (lower is better) Translates to: ATLQRTEFQVPC*LQSSRDPALHH Trigger: GTGATGGAGTGCGGGGTCCCGGCTGCTCTGAAGGCAGCAGGGGACTTGAAACTCTGTCCTCTGTAGTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | ACGGCATGTCGCTCTGGTTCATCGGTGAGTGGCGGCTaGGGCACGGGGCAAGTAGCCCCACTTCATATGATG | + |
|
Preference number: 3 (lower is better) Translates to: TACRSGSSVSGG*GTGQVAPLHMM Trigger: CATCATATGAAGTGGGGCTACTTGCCCCGTGCCTCAGCCGCCACTCACCGATGAACCAGAGCGACATGCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | GTTGTCCACATCTGCATGGCTGAGTTCTTGCCTCTCTaGACCCCACCACATCTGGGAGAGGGAGGGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: VVHICMAEFLPL*TPPHLGEGGRE Trigger: CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR-3UTR CAA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATGCATGGCTGAGTTCTaGCCTCTCTGGACCCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: NVVPFWPCLPTGARMRAGCMAEF*PLWTPP Trigger: TGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCA...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR CCA 72 bp | GCAACATCTCTACCAGCACTAGGACCTCCTGTGATGTaGAGGAGGCAGACAGCCCTCCAGCACTGTCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: ATSLPALGPPVM*RRQTALQHCPI Trigger: GATGGGACAGTGCTGGAGGGCTGTCTGCCTCCTCCACATCACAGGAGGTCCTAGTGCTGGTAGAGATGTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | GGACCCCGCACTCCATCACCAAGCAGATCATACAGATaGCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GPRTPSPSRSYR*HGQRRSLFSWL Trigger: CAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | TTGGACAAAGTCCATTCTGCCCTGCCCTATTGCTCTTaGGTCTTGGGGGTTGCCTCAGCTGTGTTGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LDKVHSALPYCS*VLGVASAVLPR Trigger: CCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | TACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTaGCTGTTGTCGCAACAGATCATGGCCCAGCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: YRCHGQRRSLFS*LLSQQIMAQHG Trigger: GCCGTGCTGGGCCATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | ACCAAGTTCCGCAGACCCGTGGACACCTTCCAGGGATaGCACCAACGGAGGAAGAAGATGGTGAGAATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TKFRRPVDTFQG*HQRRKKMVRME Trigger: CTCCATTCTCACCATCTTCTTCCTCCGTTGGTGTCATCCCTGGAAGGTGTCCACGGGTCTGCGGAACTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | TTCTGGCTCCTTGACTCAGAGATACCTGGGCTTGCCTaGAAGGTCACCTTCCCGGGACAGTTCCCCTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: FWLLDSEIPGLA*KVTFPGQFPLQ Trigger: TTGTAAGGGGAACTGTCCCGGGAAGGTGACCTTGCAGGCAAGCCCAGGTATCTCTGAGTCAAGGAGCCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | TTGACTCAATGTGGCATTTCAAGGCAGAAAGAGACGTaGTCTCCCAGTGGGTGTGTTGCAACGGGGGTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LTQCGISRQKET*SPSGCVATGVG Trigger: CCCCACCCCCGTTGCAACACACCCACTGGGAGACCACGTCTCTTTCTGCCTTGAAATGCCACATTGAGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | TCTCAGAACTGGTGCTGGTGTGGAAGCCAGACATTCTaGCTCCTTGACTCAGAGATACCTGGGCTTGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SQNWCWCGSQTF*LLDSEIPGLAC Trigger: GCAGGCAAGCCCAGGTATCTCTGAGTCAAGGAGCCAGAATGTCTGGCTTCCACACCAGCACCAGTTCTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAAACGGCTTAACTTTGTaGTCCACATCTGCATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: NVVPFWPCLPTGARMRAGNGLTL*STSAWL Trigger: CAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR GCA 72 bp | ATTCAGGCACTTCACAGGTGTACCCATGCCCCAGGATaGACCCTGAGTCACAACTGTAACACCCCACTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IQALHRCTHAPG*TLSHNCNTPLD Trigger: GTCAAGTGGGGTGTTACAGTTGTGACTCAGGGTGCATCCTGGGGCATGGGTACACCTGTGAAGTGCCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | CCTAGTGGGTTATCTTGGACAAAGTCCATTCTGCCCTaGCCTATTGCTCTTGCGTCTTGGGGGTTGCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: PSGLSWTKSILP*PIALASWGLPQ Trigger: CTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAGATAACCCACTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | CCGCACTCCATCACCAAGCAGATCATACAGATGCCATaGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PHSITKQIIQMP*AKEVTLQLAVV Trigger: GACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | TTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTTaGCTCTCTGGACCCCACCACATCTGGGAGAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LTLLSTSAWLSS*LSGPHHIWERE Trigger: CTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR GCA 72 bp | GTTATCTTGGACAAAGTCCATTCTGCCCTGCCCTATTaGTCTTGCGTCTTGGGGGTTGCCTCAGCTGTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: VILDKVHSALPY*SCVLGVASAVL Trigger: CAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAGATAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCATGGTGAGAATGGAGTaGAGGTTTCTGACTGGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: HQADHTDAMGKGGHSSAGMVRME*RFLTGF Trigger: GAACCCAGTCAGAAACCTCAACTCCATTCTCACCAT...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | GTTGCCTCAGCTGTGTTGCCCAGGCTACTTCTCAAATaGCTAGACTCAAGTAATCCCCCTGCCTCAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: VASAVLPRLLLK*LDSSNPPASAF Trigger: GAAAGCTGAGGCAGGGGGATTACTTGAGTCTAGTCATTTGAGAAGTAGCCTGGGCAACACAGCTGAGGCAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | AAGAGAACAGACCAAGAGACAGGGATATGGTGGCTGTaGTGTGGTGATGTTAGCCGTACCAAGTTCCGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KRTDQETGIWWL*CGDVSRTKFRR Trigger: TCTGCGGAACTTGGTACGGCTAACATCACCACAGCACAGCCACCATATCCCTGTCTCTTGGTCTGTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR GCA 72 bp | GTCGCTGGAGATCACAATCAGGATGCTGGAAGAGATTaGTTCTGTGTTAGGGGAGGCCCTATCTTCAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: VAGDHNQDAGRD*FCVRGGPIFNP Trigger: GGGATTGAAGATAGGGCCTCCCCTAACACAGAAGCAATCTCTTCCAGCATCCTGATTGTGATCTCCAGCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCATCCAATGGGAACCTTaGTCGCTGGAGATCACAATC | + |
|
Preference number: 3 (lower is better) Translates to: ADLGPEWPVPSNLKFIATIQWEP*SLEITI Trigger: GATTGTGATCTCCAGCGACAAAGGTTCCCATTGGAT...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | AGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTaGAAGGGCACTGGCATAGTGCCATGTCTCACAGTC | + |
|
Preference number: 3 (lower is better) Translates to: RVFWTFSLQHRL*KGTGIVPCLTV Trigger: GACTGTGAGACATGGCACTATGCCAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | TCTGAAGGTTCTGGAGACATGTTGTCTGTACTCATTTaGGATAGAAGGCTTCCAACTCAGGGAGTGGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SEGSGDMLSVLI*DRRLPTQGVEA Trigger: GGCCTCCACTCCCTGAGTTGGAAGCCTTCTATCCCAAATGAGTACAGACAACATGTCTCCAGAACCTTCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | GTGCAGAAAAAGAGAACAGACCAAGAGACAGGGATATaGTGGCTGTGCTGTGGTGATGTTAGCCGTACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VQKKRTDQETGI*WLCCGDVSRTK Trigger: CTTGGTACGGCTAACATCACCACAGCACAGCCACCATATCCCTGTCTCTTGGTCTGTTCTCTTTTTCTGCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | AGGGCCTGTTTGATGTTGATCATCTGTAGCCTGGACTaGGTGCATGAGAGTTCAAAGTTCCGGAACGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RACLMLIICSLD*VHESSKFRNVP Trigger: AGGAACGTTCCGGAACTTTGAACTCTCATGCACCCAGTCCAGGCTACAGATGATCAACATCAAACAGGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGAGATTGCTTCTGTGTTAGGGGAGGCCCTATCTTCAATCCCAAGCAGATCAACGGCTTAACTTTGTaGTCCACATCTGCATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GRDCFCVRGGPIFNPKQINGLTL*STSAWL Trigger: CAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTT...GATCTGCTTGGGATTGAAGATAGGGCCTCCCCTAACACAGAAGCAATCTCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAACAGATCATAACACACGCCCATATTaGAACACCAGCACTCAATTG | + |
|
Preference number: 3 (lower is better) Translates to: MPWAKEVTLQLAVVATDHNTRPY*NTSTQL Trigger: CAATTGAGTGCTGGTGTTCAAATATGGGCGTGTGTT...ATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | CACAACTGTAACACCCCACTTGACAGATGTGGAAACTaGGACCTGCATTACACAGCTGAGAATGAGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HNCNTPLDRCGN*DLHYTAENEQC Trigger: GCACTGCTCATTCTCAGCTGTGTAATGCAGGTCTCAGTTTCCACATCTGTCAAGTGGGGTGTTACAGTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | ACAGAGGCTGTCTCATCCAATGGGAACCTTTGTCGCTaGAGATCACAATCAGGATGCTGGAAGAGATTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TEAVSSNGNLCR*RSQSGCWKRLL Trigger: AAGCAATCTCTTCCAGCATCCTGATTGTGATCTCCAGCGACAAAGGTTCCCATTGGATGAGACAGCCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCATTTGGGATAGAAGGCTTCCAACTCAGGGAGTGGAGGCCTTTGTGATACCATTTTGGACTTTCTCTTaGCAACACAGGCTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LIWDRRLPTQGVEAFVIPFWTFS*QHRLWK Trigger: CTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAA...TGGTATCACAAAGGCCTCCACTCCCTGAGTTGGAAGCCTTCTATCCCAAATGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | ACGGAAAAAGCTGGAGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATGGGGGTTCTGGAGACATGTaGTCTGTACTCATTTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TEKAGDSKVDTEAVSSNGGSGDM*SVLIWD Trigger: ATCCCAAATGAGTACAGACAACATGTCTCCAGAACC...CCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCTCCAGCTTTTTCCGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | ATTCTGCTGAGCCGCATCTCTGTATGTGTCGTACATTaGCTCAATGTGGCATTTCAAGGCAGAAAGAGACGT | + |
|
Preference number: 3 (lower is better) Translates to: ILLSRISVCVVH*LNVAFQGRKRR Trigger: ACGTCTCTTTCTGCCTTGAAATGCCACATTGAGTCAATGTACGACACATACAGAGATGCGGCTCAGCAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | AACATCTGCAACGCTCCAGGAACACACGCCCATATTTaGACACCAGCACTCAATTGGAAAGGCAGTATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NICNAPGTHAHI*TPALNWKGSIF Trigger: GAAAATACTGCCTTTCCAATTGAGTGCTGGTGTTCAAATATGGGCGTGTGTTCCTGGAGCGTTGCAGATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGAGTGCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATATGTTTTGTGATGGCTTaGCGTAATCATCTCCTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: RSADLGPEWPVPSNLKFICFVMA*RNHLLL Trigger: TAAAAGGAGATGATTACGCAAAGCCATCACAAAACA...TATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGCACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR TCA 72 bp | CTTCTGTGTCTGCTCCACGACAGCAGTGACAGCATCTaGCTTTATAACTCTCTAATATCAAAACAGCATCGG | + |
|
Preference number: 3 (lower is better) Translates to: LLCLLHDSSDSI*LYNSLISKQHR Trigger: CCGATGCTGTTTTGATATTAGAGAGTTATAAAGTCAGATGCTGTCACTGCTGTCGTGGAGCAGACACAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CCA 72 bp | TGTGTGTATTTTCTCTTTTTAAACCACTATAGGATGTaGAGTGGACGGATCTGTTTGCAGATCTATGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: CVYFLFLNHYRM*SGRICLQIYGL Trigger: AAGTCCATAGATCTGCAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAAATACACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTCTGGCTCGCAGTGGCTaGCGAGGGCCGCTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPLARSG*RGPLRR Trigger: CCTCCGGAGCGGCCCTCGCCAGCCACTGCGAGCCAG...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGCGCCTGCACAGTGCTaGTGCTGCCGCTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAAPAQC*CCRCHH Trigger: GTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGCGGCGCCTGCACAGTaGTGCTGCTGCCGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPAAPAQ*CCCRCH Trigger: GTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCAGGAGAGGGAGGCACTaGGCGGCCCCTGGGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRRRGRH*AAPGTR Trigger: TCGGGTCCCAGGGGCCGCTCAGTGCCTCCCTCTCCT...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCACAGCAAGCGGCGCCTaGACAGTGCTGCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRATASGA*TVLLLP Trigger: CGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGT...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGCTGGGGTGCAAGGCTaGGGCTGTGTCACCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAAGVQG*GCVTSG Trigger: CCCACTGGTGACACAGCCGCAGCCTTGCACCCCAGC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACCTGGCTCGCAGTGGCTaGCGAGGGCCGCTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHLARSG*RGPLRR Trigger: CCTCCGGAGCGGCCCTCGCCAGCCACTGCGAGCCAG...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAAGGAGAGGGAGGCACTaGGCGGCCCCTGGGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSRRGRH*AAPGTR Trigger: TCGGGTCCCAGGGGCCGCTCAGTGCCTCCCTCTCCT...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCCTTTCCACCTCACGCTaGGCAGCCTCTGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRALSTSR*AASARW Trigger: CCAGCGAGCAGAGGCTGCCCAGCGTGAGGTGGAAAG...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGCTTACGCCACGGCTTaGGCCGGGCCAGGATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPAYATA*AGPGSH Trigger: GTGAGATCCTGGCCCGGCCCAAGCCGTGGCGTAAGC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGCGGGGCACGTATGCTaGATAGTAGGGCAGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAAGHVC*IVGQSP Trigger: GGGCGACTGCCCTACTATCCAGCATACGTGCCCCGC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCGGGGCTCTGTGGGGTaGGCTCTCTGTGGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRRGSVG*ALCGCG Trigger: GCCACACCCACAGAGAGCCCACCCCACAGAGCCCCG...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCCCCACATCCTGGGGCTaGCTGTCTCCATCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAPTSWG*LSPSTS Trigger: GGAGGTGGATGGAGACAGCCAGCCCCAGGATGTGGG...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGGATCCCCCACATCCTaGGGCTGGCTGTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAGSPTS*GWLSPS Trigger: GGATGGAGACAGCCAGCCCCAGGATGTGGGGGATCC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCGCAGCCTGGCTGCTTaGGAAGGGCTTCCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRRSLAA*EGLPTQ Trigger: CTGGGTGGGAAGCCCTTCTCAAGCAGCCAGGCTGCG...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGTGGGAGGCTGCAGGTaGTGGAGGCCAGCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPVGGCR*WRPASW Trigger: CCATGAAGCTGGCCTCCAGCACCTGCAGCCTCCCAC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCCCCCGCAGCCTGGCTaGTTGAGAAGGGCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLPPQPG*LRRASH Trigger: GTGGGAAGCCCTTCTCAAGCAGCCAGGCTGCGGGGG...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCAGCAGCTCTATGGTCTaGTGCGAGGGGTACGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRASSSMV*CEGYGS Trigger: CGAGCCGTACCCCTCGCAGCAGACCATAGAGCTGCT...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGTAGGCGCTGCCCACTaGGGTCAAAGCTGGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPVGAAH*GQSWDA Trigger: AGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTAC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCGGGCCTGGCGGAGGTaGAAGCTGAGGAGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASARAWRR*KLRRVG Trigger: CCCTACCCTCCTCAGCTTCCACCTCCGCCAGGCCCG...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGCTTACGCCACGGCTTaGGCCGGGCCAGGATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRAYATA*AGPGSH Trigger: GTGAGATCCTGGCCCGGCCCAAGCCGTGGCGTAAGC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACCCTCGCTGCCTCACCTaGATGGTGCGCAGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHPRCLT*MVRRAS Trigger: GCTGGCCCTGCGCACCATCCAGGTGAGGCAGCGAGG...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCCTCGCTGCCTCACCTaGATGGTGCGCAGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAPRCLT*MVRRAS Trigger: GCTGGCCCTGCGCACCATCCAGGTGAGGCAGCGAGG...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGCACTGAGCGGCCCCTaGGACCCGACTCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGALSGP*DPTPSP Trigger: TGGAGATGGAGTCGGGTCCCAGGGGCCGCTCAGTGC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTCACCCAGGGAGGAGCTaGCCCGGCCTTCGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASHPGRS*PGLRAA Trigger: AGCAGCCCGAAGGCCGGGCCAGCTCCTCCCTGGGTG...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGGCGAATGGAGCTGTTaGCTGACGCCAGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRGEWSC*LTPAAP Trigger: GGGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGGCGAATGGAGCTGTTaGCTGACGCCAGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGGEWSC*LTPAAP Trigger: GGGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGAGGCAGCAGGAGCTaGTGGAGGCTTGGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPGGSRS*WRLGTT Trigger: GGTGGTGCCAAGCCTCCATCAGCTCCTGCTGCCTCC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGGAGGCAGCAGGAGCTaGTGGAGGCTTGGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSGGSRS*WRLGTT Trigger: GGTGGTGCCAAGCCTCCATCAGCTCCTGCTGCCTCC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCTGCGGATTCTCGGGGTaGTGCTGCCTCGCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRCGFSG*CCLAAS Trigger: TGAGGCAGCGAGGCAGCATCACCCCGAGAATCCGCA...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGGTCTGGCGAGGAGATaGCAGAGGGAGAGTTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPGLARR*QRESSV Trigger: CACCGAACTCTCCCTCTGTCATCTCCTCGCCAGACC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGTGGGAGGCTGCAGGTaGTGGAGGCCAGCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGVGGCR*WRPASW Trigger: CCATGAAGCTGGCCTCCAGCACCTGCAGCCTCCCAC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTTGCTGGAGGAGGCTGTaGCGTTGGGGATGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGCWRRL*RWGCSR Trigger: CCGTGAGCATCCCCAACGGCACAGCCTCCTCCAGCA...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTGCTGCTGCTGCCGCTaGCACCACCGCCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLCCCCR*HHRHLP Trigger: AGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCA...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTACAGCAAGCGGCGCCTaGACAGTGCTGCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASATASGA*TVLLLP Trigger: CGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGT...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGTGGCCCCTCCAGGCTaGAGCAGGAGGATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSVAPPG*SRRIRR Trigger: CCTCCGAATCCTCCTGCTGCAGCCTGGAGGGGCCAC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTCTTGGCCAGCGTCTGTaGGAGGCTGCAGGTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGLGQRL*EAAGAG Trigger: TCCAGCACCTGCAGCCTCCCACAGACGCTGGCCAAG...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCGGTCTTCCTCAGGGCTaGCCAGCAGCGCAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLGLPQG*PAAQAS Trigger: AGAAGCCTGCGCTGCTGGCCAGCCCTGAGGAAGACC...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTCGGGCCTGGCGGAGGTaGAAGCTGAGGAGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASRAWRR*KLRRVG Trigger: CCCTACCCTCCTCAGCTTCCACCTCCGCCAGGCCCG...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGCTTACGCCACGGCTTaGGCCGGGCCAGGATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPAYATA*AGPGSH Trigger: GTGAGATCCTGGCCCGGCCCAAGCCGTGGCGTAAGC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTCCTCGCTGCCTCACCTaGATGGTGCGCAGGGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASPRCLT*MVRRAS Trigger: GCTGGCCCTGCGCACCATCCAGGTGAGGCAGCGAGG...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCAGCAGGGCCTGCTGCTaGGCTTGCATTTCTCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRSRACC*ACISRR Trigger: CCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCT...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTTGGCCCTGGCCCAGCTaGTCCGACAGCCACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPWPWPS*SDSHNC Trigger: GCAGTTGTGGCTGTCGGACCAGCTGGGCCAGGGCCA...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGGATCCCCCACATCCTaGGGCTGGCTGTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRGSPTS*GWLSPS Trigger: GGATGGAGACAGCCAGCCCCAGGATGTGGGGGATCC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCTGGTACTCGGCACTTTaGCAGGTGGGGCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAWYSAL*QVGHQV Trigger: TACCTGGTGCCCCACCTGCCAAAGTGCCGAGTACCA...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGGGCTCCGTGCCCAGTaGGCCCTTGATGGAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSGLRAQ*ALDGVI Trigger: GATGACTCCATCAAGGGCTCACTGGGCACGGAGCCC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGTGCGGATTCTCGGGGTaGTGCTGCCTCGCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKCGFSG*CCLAAS Trigger: TGAGGCAGCGAGGCAGCATCACCCCGAGAATCCGCA...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGTGGGAGGCTGCAGGTaGTGGAGGCCAGCTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAVGGCR*WRPASW Trigger: CCATGAAGCTGGCCTCCAGCACCTGCAGCCTCCCAC...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGCCTCACCTGGATGGTaGGCAGGGCCAGCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRASPGW*AGPAHS Trigger: AGAATGTGCTGGCCCTGCGCACCATCCAGGTGAGGC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGCCTCACCTGGATGGTaGGCAGGGCCAGCACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGASPGW*AGPAHS Trigger: AGAATGTGCTGGCCCTGCGCACCATCCAGGTGAGGC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGTGCTGCTGCTGCCGCTaGCACCACCGCCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGRECCCCR*HHRHLP Trigger: AGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCA...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGCTGCTGATTCTCCTTaGTGCTTTCCAGCGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAAADSP*CFPATG Trigger: GCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGCAGC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTCCCCCGCAGCCTGGCTaGTTGAGAAGGGCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASPPQPG*LRRASH Trigger: GTGGGAAGCCCTTCTCAAGCAGCCAGGCTGCGGGGG...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCTTCAAGCTCAGTTTGTaGCAGGGCTTGGGCCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAFKLSL*QGLGLD Trigger: GTCGAGGCCCAAGCCCTGGCACAAACTGAGCTTGAA...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGCTCAACTCCTGGGGCTaGAAACACGGGCTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKLNSWG*KHGLGH Trigger: GTGCCCCAGCCCGTGTTTGCAGCCCCAGGAGTTGAG...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGGGGTGCAAGGCTaGGGCTGTGTCACCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASAGVQG*GCVTSG Trigger: CCCACTGGTGACACAGCCGCAGCCTTGCACCCCAGC...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTCTGCTCTCTGGCACTaGGTGGCTCTGGGCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLSALWH*VALGTS Trigger: AGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCAGA...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCCTCGTTCTGCTCTCTaGCACTGGGTGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAPRSAL*HWVALG Trigger: GCCCAGAGCCACCCAGTGCCAGAGAGCAGAACGAGG...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCGCAGCCTCTGCTCGCTaGTTGGCCTTCTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLAASAR*LAFSRF Trigger: GAACCTGGAGAAGGCCAACCAGCGAGCAGAGGCTGC...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGGAGGCTGCAGGTGCTaGAGGCCAGCTTCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSGGCRC*RPASWL Trigger: GAGCCATGAAGCTGGCCTCCAGCACCTGCAGCCTCC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTTGGCCAGCGTCTGTaGGAGGCTGCAGGTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPLGQRL*EAAGAG Trigger: TCCAGCACCTGCAGCCTCCCACAGACGCTGGCCAAG...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACCGGGTCTTCCGGGCCTaGCGGAGGTGGAAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNRVFRA*RRWKLR Trigger: CCTCAGCTTCCACCTCCGCCAGGCCCGGAAGACCCG...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTCATCAGGACCCAGGCTaGGGCCCAGCAGGGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTHQDPG*GPAGAA Trigger: CGCAGCCCCTGCTGGGCCCCAGCCTGGGTCCTGATG...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTCATCTTCCGAGGTGCTaGAGGAGGCTGTGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGHLPRC*RRLCRW Trigger: CCAACGGCACAGCCTCCTCCAGCACCTCGGAAGATG...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGCACTGAGCGGCCCCTaGGACCCGACTCCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGALSGP*DPTPSP Trigger: TGGAGATGGAGTCGGGTCCCAGGGGCCGCTCAGTGC...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTAGGCCCAGAGGCTCCTaGGACGTCTTTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGRPRGS*DVFSGS Trigger: GGAGCCTGAAAAGACGTCCCAGGAGCCTCTGGGCCT...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTAGGAGAGCAGCTCTATaGTCTGCTGCGAGGGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPRRAAL*SAARGT Trigger: CGTACCCCTCGCAGCAGACCATAGAGCTGCTCTCCT...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACCCACATCCTGGGGCTaGCTGTCTCCATCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSPTSWG*LSPSTS Trigger: GGAGGTGGATGGAGACAGCCAGCCCCAGGATGTGGG...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGGATCCCCCACATCCTaGGGCTGGCTGTCTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAGSPTS*GWLSPS Trigger: GGATGGAGACAGCCAGCCCCAGGATGTGGGGGATCC...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTTGTCACCAGTGGGGCTaGTACTCGGCACTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPCHQWG*YSALWQ Trigger: CTGCCAAAGTGCCGAGTACCAGCCCCACTGGTGACA...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTTGCCCAGTGAGCCCTTaGTGGAGTCATCCTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPCPVSP*WSHPPR Trigger: CCTCGGAGGATGACTCCATCAAGGGCTCACTGGGCA...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATGCCCAGTGAGCCCTTaGTGGAGTCATCCTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSCPVSP*WSHPPR Trigger: CCTCGGAGGATGACTCCATCAAGGGCTCACTGGGCA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCTCACTCACGCTACCCTaGGACAGTCCCAGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRSLTLP*DSPRTF Trigger: GAAGGTCCTGGGACTGTCTCAGGGTAGCGTGAGTGA...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATGGATTGGGTGTGCCTaGAAGAAAGGGCCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSWIGCA*KKGPWG Trigger: GCCCCAGGGCCCTTTCTTTCAGGCACACCCAATCCA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGGTCTGGCGAGGAGATaGCAGAGGGAGAGTTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHGLARR*QRESSV Trigger: CACCGAACTCTCCCTCTGTCATCTCCTCGCCAGACC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCACGTCTTGTAGGCGCTaGCCACTGGGGTCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRTSCRR*PLGSKL Trigger: CAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGT...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGTGGCATCTTCCGAGGTaGTGGAGGAGGCTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKWHLPR*WRRLCR Trigger: ACGGCACAGCCTCCTCCAGCACCTCGGAAGATGCCA...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTTGCGGATGATCCGCTaGACAAATGCAGCGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLLRMIR*TNAAGD Trigger: GTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAA...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGTGGCCCCTCCAGGCTaGAGCAGGAGGATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNVAPPG*SRRIRR Trigger: CCTCCGAATCCTCCTGCTGCAGCCTGGAGGGGCCAC...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGTCTGCTCTCTGGCACTaGGTGGCTCTGGGCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGRESALWH*VALGTS Trigger: AGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCAGA...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGCAGCCTCTGCTCGCTaGTTGGCCTTCTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAAASAR*LAFSRF Trigger: GAACCTGGAGAAGGCCAACCAGCGAGCAGAGGCTGC...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGGTCAGCGATTTGGTTaGCTGAGACCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPGQRFG*LRPPPA Trigger: AGCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTCGGGCCTGGCGGAGGTaGAAGCTGAGGAGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTRAWRR*KLRRVG Trigger: CCCTACCCTCCTCAGCTTCCACCTCCGCCAGGCCCG...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGCATCTTCCGAGGTGCTaGAGGAGGCTGTGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGREHLPRC*RRLCRW Trigger: CCAACGGCACAGCCTCCTCCAGCACCTCGGAAGATG...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACATTCTGGCTCGCAGTaGCTGGCGAGGGCCGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQHSGSQ*LARAAP Trigger: CGGAGCGGCCCTCGCCAGCCACTGCGAGCCAGAATG...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGGCCCTGGCCCAGCTaGTCCGACAGCCACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNWPWPS*SDSHNC Trigger: GCAGTTGTGGCTGTCGGACCAGCTGGGCCAGGGCCA...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GGGGGCTACGGCGGACTAATGCTTGCCCTTTCTGGAAACAAGGAAGATGGAAGCCACCCAGGGAGGAGCTaGCCCGGCCTTCGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGYGGLMLALSGNKEDGSHPGRS*PGLRAA Trigger: AGCAGCCCGAAGGCCGGGCCAGCTCCTCCCTGGGTG...GCTTCCATCTTCCTTGTTTCCAGAAAGGGCAAGCATTAGTCCGCCGTAGCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGGGGTGGGCTCTCTGTaGGTGTGGCCTGGCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQGVGSL*VWPGVR Trigger: CCTGACGCCAGGCCACACCCACAGAGAGCCCACCCC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTATCTTGCCCTCGGTCTaGATCCCCCACATCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPILPSV*IPHILG Trigger: CCCCAGGATGTGGGGGATCCAGACCGAGGGCAAGAT...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGATCTTGCCCTCGGTCTaGATCCCCCACATCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGREILPSV*IPHILG Trigger: CCCCAGGATGTGGGGGATCCAGACCGAGGGCAAGAT...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAAGAGGGAGAGTTCGGTaGCCCCTCCAGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGRGRVR*PLQAAA Trigger: TGCTGCAGCCTGGAGGGGCCACCGAACTCTCCCTCT...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTTGGTACTCGGCACTTTaGCAGGTGGGGCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGWYSAL*QVGHQV Trigger: TACCTGGTGCCCCACCTGCCAAAGTGCCGAGTACCA...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGCCTGGCTGCCAAGGTaGTGTGGACTTCTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHAWLPR*CGLLGD Trigger: GTCTCCAAGAAGTCCACATCACCTTGGCAGCCAGGC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAAATGGAGCTGTTGACTaGCGCCAGCTGCTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSNGAVD*RQLLPK Trigger: CTTCGGGAGCAGCTGGCGTCAGTCAACAGCTCCATT...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTAGCGATTTGGTTGGCTaGGACCTCCTCCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPSDLVG*DLLQLL Trigger: CAGGAGCTGGAGGAGGTCTCAGCCAACCAAATCGCT...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAGCTCCAGGATGCTCTTaGTGGCGTCGTCCGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGAPGCS*WRRPSL Trigger: CAGGCTCGGACGACGCCATCAAGAGCATCCTGGAGC...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGTTCCAGAATGTTCTTaGTGGCATCTTCCGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAVPECS*WHLPRC Trigger: GCACCTCGGAAGATGCCATCAAGAACATTCTGGAAC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATCACTCACGCTACCCTaGGACAGTCCCAGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSSLTLP*DSPRTF Trigger: GAAGGTCCTGGGACTGTCTCAGGGTAGCGTGAGTGA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGCAGCCTGGCTGCTTaGGAAGGGCTTCCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQRSLAA*EGLPTQ Trigger: CTGGGTGGGAAGCCCTTCTCAAGCAGCCAGGCTGCG...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTTGGATTGGGTGTGCCTaGAAGAAAGGGCCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASWIGCA*KKGPWG Trigger: GCCCCAGGGCCCTTTCTTTCAGGCACACCCAATCCA...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGAAACTCAGAGGCTCTaGGTGAACCTGTTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPETQRL*VNLFPS Trigger: ACTGGGGAACAGGTTCACTCAGAGCCTCTGAGTTTC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTACCTCCTCCAGCTCCTaGAGGGAATGTCGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPTSSSS*RECRSC Trigger: GCAGCTTCGACATTCCCTGCAGGAGCTGGAGGAGGT...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGACTTGGCAGCTAGCTaGCGCTCCAGGTCAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHDLAAS*RSRSAI Trigger: AATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGACTTGGCAGCTAGCTaGCGCTCCAGGTCAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSDLAAS*RSRSAI Trigger: AATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCCGCTGGCCAATGTTGTaGTTGAGAAGTTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRARWPML*LRSCSF Trigger: GAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCG...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGACTGTGCCGTTGGGGATaGTCACGGAGGCTGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGLCRWG*SRRLGS Trigger: ACTCCCCAGCCTCCGTGAGCATCCCCAACGGCACAG...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGCAGAGGCAGGCAGATCTTTCTGAGTTCCAGGCCAGCCAGAGCTTTAAAGGCGCCTGCACAGTGCTaGTGCTGCCGCTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRQIFLSSRPARALKAPAQC*CCRCHH Trigger: GTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGC...CTTTAAAGCTCTGGCTGGCCTGGAACTCAGAAAGATCTGCCTGCCTCTGCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGTTGCGGATGATCCGCTaGACAAATGCAGCGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGRELRMIR*TNAAGD Trigger: GTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAA...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCCTTCTGTGTCAGCTTaGTCCATGGCTTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRPSVSA*SMALAV Trigger: CACGGCCAAAGCCATGGAGCAAGCTGACACAGAAGG...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGCTGATTCTCCTTGCTaGTTTCCAGCGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRADSPC*FPATGP Trigger: TGGGCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGGCTTCTTGGCCTaGATGAGACTCAACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRLGFLA*MRLNSW Trigger: CCAGGAGTTGAGTCTCATGCAGGCCAAGAAGCCCAG...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGCCCAGAGGGTGGGTATaGTCCTCTTTGGGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGREPRGWV*SSLGPS Trigger: AGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGG...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCCCAGAGGGTGGGTATaGTCCTCTTTGGGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAPRGWV*SSLGPS Trigger: AGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGG...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGTAGGCGCTGCCCACTaGGGTCAAAGCTGGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNVGAAH*GQSWDA Trigger: AGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTAC...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGACTTTCCACCTCACGCTaGGCAGCCTCTGCTCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGLSTSR*AASARW Trigger: CCAGCGAGCAGAGGCTGCCCAGCGTGAGGTGGAAAG...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGGTCAGCGATTTGGTTaGCTGAGACCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRGQRFG*LRPPPA Trigger: AGCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGACTATGGCCTCGGACTTaGCAGCTAGCTGCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGLWPRT*QLAAAP Trigger: TGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAG...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAGGTCTTCCTCAGGGCTaGCCAGCAGCGCAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGGLPQG*PAAQAS Trigger: AGAAGCCTGCGCTGCTGGCCAGCCCTGAGGAAGACC...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAAGCAGGGCCTGCTGCTaGGCTTGCATTTCTCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGSRACC*ACISRR Trigger: CCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGGTATGCTCCTCTTTaGGGCCATCTTGCCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPGYAPL*GHLALG Trigger: ACCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGGGGTATGCTCCTCTTTaGGGCCATCTTGCCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGREGYAPL*GHLALG Trigger: ACCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCC...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAAGAGGGAGAGTTCGGTaGCCCCTCCAGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGRGRVR*PLQAAA Trigger: TGCTGCAGCCTGGAGGGGCCACCGAACTCTCCCTCT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTTGTCACCAGTGGGGCTaGTACTCGGCACTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASACHQWG*YSALWQ Trigger: CTGCCAAAGTGCCGAGTACCAGCCCCACTGGTGACA...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGGCCAATGTTGTGCTTaGGAAGTTGCTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPGQCCA*EVAPSP Trigger: AGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTCAAAGCTGGGACGCTaGAGTCTGTCGTCTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLSKLGR*SLSSRV Trigger: GACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGA...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGGGCCAGCACATTCTaGTCATCCGACAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGRERASTF*SSDRNC Trigger: GCAGTTCCTGTCGGATGAGCAGAATGTGCTGGCCCT...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTATCTCCTTCTTGGCCTaGTCCAGGATGCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LALPSHRGEDEGRIPAPPISFLA*SRMLLM Trigger: CATCAAGAGCATCCTGGAGCAGGCCAAGAAGGAGAT...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGTGCCGTTGGGGATaGTCACGGAGGCTGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQLCRWG*SRRLGS Trigger: ACTCCCCAGCCTCCGTGAGCATCCCCAACGGCACAG...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTTGCTGGAGGAGGCTGTaGCGTTGGGGATGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTCWRRL*RWGCSR Trigger: CCGTGAGCATCCCCAACGGCACAGCCTCCTCCAGCA...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGATCTCCAGCAGGGCCTaGTGCTGGGCTTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKISSRA*CWACIS Trigger: AGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGAT...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGCCTTCTGTGTCAGCTTaGTCCATGGCTTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGREPSVSA*SMALAV Trigger: CACGGCCAAAGCCATGGAGCAAGCTGACACAGAAGG...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGCCTTCTGTGTCAGCTTaGTCCATGGCTTTGGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKPSVSA*SMALAV Trigger: CACGGCCAAAGCCATGGAGCAAGCTGACACAGAAGG...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGCTGATTCTCCTTGCTaGTTTCCAGCGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHADSPC*FPATGP Trigger: TGGGCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGCTGATTCTCCTTGCTaGTTTCCAGCGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSADSPC*FPATGP Trigger: TGGGCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCAGTCTGGATTGGGTGTaGCTGAAAGAAAGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRSLDWV*LKERAL Trigger: CAGGGCCCTTTCTTTCAGGCACACCCAATCCAGACT...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTCCTCGTTCTGCTCTCTaGCACTGGGTGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTPRSAL*HWVALG Trigger: GCCCAGAGCCACCCAGTGCCAGAGAGCAGAACGAGG...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATGGAGGCCAGCTTCATaGCTCTCAGGATGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSWRPAS*LSGCSA Trigger: AGCTGAGCATCCTGAGAGCCATGAAGCTGGCCTCCA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGCGGGGCACGTATGCTaGATAGTAGGGCAGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQAGHVC*IVGQSP Trigger: GGGCGACTGCCCTACTATCCAGCATACGTGCCCCGC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGAGCTTCTCCTTGACCTaGCGTGTCAACTCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKSFSLT*RVNSSV Trigger: CACGCTGGAGTTGACACGCCAGGTCAAGGAGAAGCT...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGCTTCTCCTTGACCTaGCGTGTCAACTCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGRESFSLT*RVNSSV Trigger: CACGCTGGAGTTGACACGCCAGGTCAAGGAGAAGCT...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACCCAGCTCTGGGGACATaGCCACCATCTCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNPALGT*PPSPGC Trigger: GCATCCAGGAGATGGTGGCCATGTCCCCAGAGCTGG...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGTTTGTGCCAGGGCTTaGGCCTCGACAGCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGVCARA*ASTADL Trigger: CAGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAAC...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGTCTTGAGGTTGAGTTaGAAGGAGAGCAGCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAVLRLS*KESSSM Trigger: CATAGAGCTGCTCTCCTTCCAACTCAACCTCAAGAC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGCTGTTTCCCAGAGGGTaGGTATGCTCCTCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKLFPRG*VCSSLG Trigger: CCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAG...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAAGAGGGAGAGTTCGGTaGCCCCTCCAGGCTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQRGRVR*PLQAAA Trigger: TGCTGCAGCCTGGAGGGGCCACCGAACTCTCCCTCT...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGGGACCTCTTCCCGGTTaGCAGCCCTCTCCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMGPLPG*QPSPAG Trigger: ACCGGCTGGAGAGGGCTGCCAACCGGGAAGAGGTCC...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
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| 3UTR CAA 72 bp | GAAGGTGGGGCGGCGGAGGCTGAGACAGGGGTTCATTaGTCCCAGAATGGACTCCTCAGGAAACTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: EGGAAEAETGVH*SQNGLLRKLSL Trigger: CAGGCTGAGTTTCCTGAGGAGTCCATTCTGGGACAAATGAACCCCTGTCTCAGCCTCCGCCGCCCCACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGACCCGACTTCTTTTACTaGGAGCCACCACCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGPDFFY*EPPPQP Trigger: AGGCTGAGGTGGTGGCTCTCAGTAAAAGAAGTCGGG...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | CCCGCACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACGGCGAATGGAGCTGTTaGCTGACGCCAGCTGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PALHHQADHTDAMGKGGHGEWSC*LTPAAP Trigger: GGGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCC...GTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGGCTCCAGGATGCTCTTaGTGGCGTCGTCCGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMAPGCS*WRRPSL Trigger: CAGGCTCGGACGACGCCATCAAGAGCATCCTGGAGC...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGTTCCAGAATGTTCTTaGTGGCATCTTCCGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLDPTTSGRGREGEREGVPECS*WHLPRC Trigger: GCACCTCGGAAGATGCCATCAAGAACATTCTGGAAC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGATGGCTAGCTTCTCCTTaGCCTGGCGTGTCAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGWLASP*PGVSTP Trigger: TGGAGTTGACACGCCAGGTCAAGGAGAAGCTAGCCA...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGAAACTCAGAGGCTCTaGGTGAACCTGTTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSETQRL*VNLFPS Trigger: ACTGGGGAACAGGTTCACTCAGAGCCTCTGAGTTTC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGGAGGAAGGGGCAGGTaGCACACATGTCGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTGGRGR*HTCREV Trigger: GACCTCACGACATGTGTGTCACCTGCCCCTTCCTCC...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAACCTCCTCCAGCTCCTaGAGGGAATGTCGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGTSSSS*RECRSC Trigger: GCAGCTTCGACATTCCCTGCAGGAGCTGGAGGAGGT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCGCTGGGGTGCAAGGCTaGGGCTGTGTCACCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQADHTDAMGKGGHSSAGAGVQG*GCVTSG Trigger: CCCACTGGTGACACAGCCGCAGCCTTGCACCCCAGC...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATTCTCATGCCGCCGCTaGAAGTTGGGGTTCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRLLRAGPSERRGGGICSFSCRR*KLGFTL Trigger: TAAGGTGAACCCCAACTTGCAGCGGCGGCATGAGAA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGCCACCACCTCAGCCTaGAAGCTCTTCAGCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQATTSA*KLFSTG Trigger: TCCGGTGCTGAAGAGCTTCCAGGCTGAGGTGGTGGC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGCTGCCAAGGTGATGTaGACTTCTTGGAGACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAAAKVM*TSWRPF Trigger: GAAGGGTCTCCAAGAAGTCCACATCACCTTGGCAGC...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCGCAGCTCTGTCTGTGTaGCCTTTAGCGCTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: PFWPCLPTGARMRAGFQRAALSV*PLALNV Trigger: TACATTCAGCGCTAAAGGCCACACAGACAGAGCTGC...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGCAGCCTCTGCTCGCTaGTTGGCCTTCTCCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQAASAR*LAFSRF Trigger: GAACCTGGAGAAGGCCAACCAGCGAGCAGAGGCTGC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGGATCTCTCTGTCCTTaGAGGCCAGAGCTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNGSLCP*RPELPP Trigger: TGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCC...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGGTCAGCGATTTGGTTaGCTGAGACCTCCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASGQRFG*LRPPPA Trigger: AGCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACC...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCACTCTATCTCCTTCTTaGCCTGCTCCAGGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLTLSPS*PAPGCS Trigger: AGAGCATCCTGGAGCAGGCCAAGAAGGAGATAGAGT...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCTGGCCCTGGCCCAGCTaGTCCGACAGCCACAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGGLCDTTFAKGNISTSWPWPS*SDSHNC Trigger: GCAGTTGTGGCTGTCGGACCAGCTGGGCCAGGGCCA...GCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCCACTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTAGGCCCAGAGGCTCCTaGGACGTCTTTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTRPRGS*DVFSGS Trigger: GGAGCCTGAAAAGACGTCCCAGGAGCCTCTGGGCCT...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGTTTGTGCCAGGGCTTaGGCCTCGACAGCAGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNVCARA*ASTADL Trigger: CAGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAAC...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCCGGGGCTCTGTGGGGTaGGCTCTCTGTGGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADLGPEWPVPSNLKFIATRGSVG*ALCGCG Trigger: GCCACACCCACAGAGAGCCCACCCCACAGAGCCCCG...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGCTCTAAGCTCTTCATaGGGGGCTTTTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPALSSS*GAFGPQ Trigger: CTGAGGACCAAAAGCCCCCCATGAAGAGCTTAGAGC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGCCTGGCTGCCAAGGTaGTGTGGACTTCTTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQAWLPR*CGLLGD Trigger: GTCTCCAAGAAGTCCACATCACCTTGGCAGCCAGGC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAAATGGAGCTGTTGACTaGCGCCAGCTGCTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQNGAVD*RQLLPK Trigger: CTTCGGGAGCAGCTGGCGTCAGTCAACAGCTCCATT...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGTGCCCAGTGAGCCCTTaGTGGAGTCATCCTCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMCPVSP*WSHPPR Trigger: CCTCGGAGGATGACTCCATCAAGGGCTCACTGGGCA...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | GGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCACTAGGGGAGGCAGCAGGAGCTaGTGGAGGCTTGGCACCACC | + |
|
Preference number: 4 (lower is better) Translates to: GGLCDTTFAKGNISTSTRGGSRS*WRLGTT Trigger: GGTGGTGCCAAGCCTCCATCAGCTCCTGCTGCCTCC...CCTAGTGCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAAGTTGCTCCTTCACCTaGAAGGCGATCTCAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGSCSFT*KAISAV Trigger: CACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGCCAATGTTGTGCTTaGGAAGTTGCTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPGQCCA*EVAPSP Trigger: AGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GGGAGTGGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCGCTCCAGGATGCTCTTaGTGGCGTCGTCCGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GSGGLCDTTFAKGNISTSAPGCS*WRRPSL Trigger: CAGGCTCGGACGACGCCATCAAGAGCATCCTGGAGC...GCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCCACTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATGGCTAGCTTCTCCTTaGCCTGGCGTGTCAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGWLASP*PGVSTP Trigger: TGGAGTTGACACGCCAGGTCAAGGAGAAGCTAGCCA...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTAACCCTCTTCCTGTTTaGTCTTCACCAGAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPNPLPV*SSPEPC Trigger: ACAGGGCTCTGGTGAAGATCAAACAGGAAGAGGGTT...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CCCGCACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACGGAGGAAGGGGCAGGTaGCACACATGTCGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: PALHHQADHTDAMGKGGHGGRGR*HTCREV Trigger: GACCTCACGACATGTGTGTCACCTGCCCCTTCCTCC...GTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTTCAAAGCTGGGACGCTaGAGTCTGTCGTCTAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASSKLGR*SLSSRV Trigger: GACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGA...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTCATCCGACAGGAACTaGTTCATCTTGATGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWPCLPTGARMRAGFQRLSSDRN*FILMKG Trigger: GCCCTTCATCAAGATGAAGCAGTTCCTGTCGGATGA...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACATCTCCTTCTTGGCCTaGTCCAGGATGCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHISFLA*SRMLLM Trigger: CATCAAGAGCATCCTGGAGCAGGCCAAGAAGGAGAT...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | GGAGGCAGAGGCAGGCAGATCTTTCTGAGTTCCAGGCCAGCCAGAGCTTTAAAGTGGCATCTTCCGAGGTaGTGGAGGAGGCTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRQIFLSSRPARALKWHLPR*WRRLCR Trigger: ACGGCACAGCCTCCTCCAGCACCTCGGAAGATGCCA...CTTTAAAGCTCTGGCTGGCCTGGAACTCAGAAAGATCTGCCTGCCTCTGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAATCTCCAGCAGGGCCTaGTGCTGGGCTTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGISSRA*CWACIS Trigger: AGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGAT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGCAGCTCTATGGTCTaGTGCGAGGGGTACGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMSSSMV*CEGYGS Trigger: CGAGCCGTACCCCTCGCAGCAGACCATAGAGCTGCT...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
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| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTAGTCTGGATTGGGTGTaGCTGAAAGAAAGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASSLDWV*LKERAL Trigger: CAGGGCCCTTTCTTTCAGGCACACCCAATCCAGACT...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTTTCTCATGCCGCCGCTaGAAGTTGGGGTTCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASFSCRR*KLGFTL Trigger: TAAGGTGAACCCCAACTTGCAGCGGCGGCATGAGAA...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGGCCACCACCTCAGCCTaGAAGCTCTTCAGCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMATTSA*KLFSTG Trigger: TCCGGTGCTGAAGAGCTTCCAGGCTGAGGTGGTGGC...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
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| CDS-3UTR CCA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGATGTGGACTTCTTaGAGACCCTTCTGTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LPLWTPPHLGEGGRERGKVMWTS*RPFCLS Trigger: CGAGAGACAGAAGGGTCTCCAAGAAGTCCACATCAC...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGCAGCTCTGTCTGTGTaGCCTTTAGCGCTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSASYEQGHQKEEAAASAAALSV*PLALNV Trigger: TACATTCAGCGCTAAAGGCCACACAGACAGAGCTGC...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | CAGCTCTCGGGCCACACTACAGAGGACAGAGTTTCAAGTCCCCTGCTGCCTTCAAGGAGAGCAGCTCTATaGTCTGCTGCGAGGGGTACG | + |
|
Preference number: 4 (lower is better) Translates to: QLSGHTTEDRVSSPLLPSRRAAL*SAARGT Trigger: CGTACCCCTCGCAGCAGACCATAGAGCTGCTCTCCT...TGAAGGCAGCAGGGGACTTGAAACTCTGTCCTCTGTAGTGTGGCCCGAGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR CCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGGGTATGCTCCTCTTTaGGGCCATCTTGCCCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTGYAPL*GHLALG Trigger: ACCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCC...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCGGACCTCTTCCCGGTTaGCAGCCCTCTCCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ADLGPEWPVPSNLKFIATGPLPG*QPSPAG Trigger: ACCGGCTGGAGAGGGCTGCCAACCGGGAAGAGGTCC...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 72 bp | TGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTaGTCGCAACAGATCATGGCCCAGCACGGCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CHGQRRSLFSWL*SQQIMAQHGQS Trigger: ACTCTGGCCGTGCTGGGCCATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | CAGCTCTCGGGCCACACTACAGAGGACAGAGTTTCAAGTCCCCTGCTGCCTTCACCCGACTTCTTTTACTaGGAGCCACCACCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QLSGHTTEDRVSSPLLPSPDFFY*EPPPQP Trigger: AGGCTGAGGTGGTGGCTCTCAGTAAAAGAAGTCGGG...TGAAGGCAGCAGGGGACTTGAAACTCTGTCCTCTGTAGTGTGGCCCGAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACCTGAATGTAACACCTTaGTTTTCTCCTCTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHLNVTP*FSPLPP Trigger: GGGAGGCAGAGGAGAAAATCAAGGTGTTACATTCAG...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR TCA 90 bp | CATTTAGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGAGGAGAGGGAGGCACTaGGCGGCCCCTGGGACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HLESFGLSLCNTGSGRALRRGRH*AAPGTR Trigger: TCGGGTCCCAGGGGCCGCTCAGTGCCTCCCTCTCCT...CAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAATTCGGAGGTGGACTTaGAACTCAGAGGCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGIRRWT*NSEALS Trigger: ACTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAAT...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGACGTCTTGTAGGCGCTaGCCACTGGGGTCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMTSCRR*PLGSKL Trigger: CAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGT...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTCGCTGGCCAATGTTGTaGTTGAGAAGTTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASRWPML*LRSCSF Trigger: GAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCG...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGTCATCCGACAGGAACTaGTTCATCTTGATGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEFLPLWTPPHLGEGGRESSDRN*FILMKG Trigger: GCCCTTCATCAAGATGAAGCAGTTCCTGTCGGATGA...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGGCGGCGCCTGCACAGTaGTGCTGCTGCCGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLESFGLSLCNTGSGRALAAPAQ*CCCRCH Trigger: GTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGC...CAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCCTCAACTCCTGGGGCTaGAAACACGGGCTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADLGPEWPVPSNLKFIATLNSWG*KHGLGH Trigger: GTGCCCCAGCCCGTGTTTGCAGCCCCAGGAGTTGAG...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCTCATGCCGCCGCTaGAAGTTGGGGTTCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGFSCRR*KLGFTL Trigger: TAAGGTGAACCCCAACTTGCAGCGGCGGCATGAGAA...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGTGATGTGGACTTCTTaGAGACCCTTCTGTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGVMWTS*RPFCLS Trigger: CGAGAGACAGAAGGGTCTCCAAGAAGTCCACATCAC...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCCTCGAGCTTTTCTTaGAGTTTCTCTATGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASASSFS*SFSMAS Trigger: CGAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGC...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAATGGAGGCCAGCTTCATaGCTCTCAGGATGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYEQGHQKEEAAASAHTQWRPAS*LSGCSA Trigger: AGCTGAGCATCCTGAGAGCCATGAAGCTGGCCTCCA...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAACAGATCATAGCAGGGCCTGCTGCTaGGCTTGCATTTCTCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MPWAKEVTLQLAVVATDHSRACC*ACISRR Trigger: CCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCT...ATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | CAGCTCTCGGGCCACACTACAGAGGACAGAGTTTCAAGTCCCCTGCTGCCTTCAAGCTTCTCCTTGACCTaGCGTGTCAACTCCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QLSGHTTEDRVSSPLLPSSFSLT*RVNSSV Trigger: CACGCTGGAGTTGACACGCCAGGTCAAGGAGAAGCT...TGAAGGCAGCAGGGGACTTGAAACTCTGTCCTCTGTAGTGTGGCCCGAGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCCCAGCTCTGGGGACATaGCCACCATCTCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGGLCDTTFAKGNISTSPALGT*PPSPGC Trigger: GCATCCAGGAGATGGTGGCCATGTCCCCAGAGCTGG...GCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCCACTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR CCA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGTCTTGAGGTTGAGTTaGAAGGAGAGCAGCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RLLRAGPSERRGGGICSHVLRLS*KESSSM Trigger: CATAGAGCTGCTCTCCTTCCAACTCAACCTCAAGAC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCATCTTGCCCTCGGTCTaGATCCCCCACATCCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQADHTDAMGKGGHSSAGILPSV*IPHILG Trigger: CCCCAGGATGTGGGGGATCCAGACCGAGGGCAAGAT...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 72 bp | CTTGGACAAAGTCCATTCTGCCCTGCCCTATTGCTCTaGCGTCTTGGGGGTTGCCTCAGCTGTGTTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LGQSPFCPALLL*RLGGCLSCVAQ Trigger: CTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | CTCATTTGGGATAGAAGGCTTCCAACTCAGGGAGTGGAGGCCTTTGTGATACCAGGGCTCCGTGCCCAGTaGGCCCTTGATGGAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LIWDRRLPTQGVEAFVIPGLRAQ*ALDGVI Trigger: GATGACTCCATCAAGGGCTCACTGGGCACGGAGCCC...TGGTATCACAAAGGCCTCCACTCCCTGAGTTGGAAGCCTTCTATCCCAAATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | GGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCACTAGGGGTCTGGCGAGGAGATaGCAGAGGGAGAGTTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GGLCDTTFAKGNISTSTRGLARR*QRESSV Trigger: CACCGAACTCTCCCTCTGTCATCTCCTCGCCAGACC...CCTAGTGCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGTGGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCGACTTGGCAGCTAGCTaGCGCTCCAGGTCAGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: GSGGLCDTTFAKGNISTSDLAAS*RSRSAI Trigger: AATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTC...GCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCCACTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | CCCGCACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACAGGGCCAGCACATTCTaGTCATCCGACAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PALHHQADHTDAMGKGGHRASTF*SSDRNC Trigger: GCAGTTCCTGTCGGATGAGCAGAATGTGCTGGCCCT...GTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAATCTCCTTCTTGGCCTaGTCCAGGATGCTCTTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGISFLA*SRMLLM Trigger: CATCAAGAGCATCCTGGAGCAGGCCAAGAAGGAGAT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCCACTGGGGTCAAAGCTaGGACGCTGCAGTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: HQADHTDAMGKGGHSSAGHWGQS*DAAVCR Trigger: ACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTG...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACGCCTCGAGCTTTTCTTaGAGTTTCTCTATGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNASSFS*SFSMAS Trigger: CGAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGC...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGATTGCTTCTGTGTTAGGGGAGGCCCTATCTTCAATCCCAAGCAGATCCGATGGGGAGGAGGTTaGCTCCGTGGGACTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRDCFCVRGGPIFNPKQIRWGGG*LRGTGL Trigger: CAAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCG...GATCTGCTTGGGATTGAAGATAGGGCCTCCCCTAACACAGAAGCAATCTCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGTGGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCTGGTACTCGGCACTTTaGCAGGTGGGGCACCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSGGLCDTTFAKGNISTSWYSAL*QVGHQV Trigger: TACCTGGTGCCCCACCTGCCAAAGTGCCGAGTACCA...GCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCCACTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 72 bp | AAAGTCCATTCTGCCCTGCCCTATTGCTCTTGCGTCTaGGGGGTTGCCTCAGCTGTGTTGCCCAGGCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: KVHSALPYCSCV*GVASAVLPRLL Trigger: AAGTAGCCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTATTCGGAGGTGGACTTaGAACTCAGAGGCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTIRRWT*NSEALS Trigger: ACTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAAT...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | ACGGAAAAAGCTGGAGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATGGGCCCCCGCAGCCTGGCTaGTTGAGAAGGGCTTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEKAGDSKVDTEAVSSNGPPQPG*LRRASH Trigger: GTGGGAAGCCCTTCTCAAGCAGCCAGGCTGCGGGGG...CCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCTCCAGCTTTTTCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR GCA 90 bp | ACGGAAAAAGCTGGAGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATGGGGTGGCCCCTCCAGGCTaGAGCAGGAGGATTCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEKAGDSKVDTEAVSSNGVAPPG*SRRIRR Trigger: CCTCCGAATCCTCCTGCTGCAGCCTGGAGGGGCCAC...CCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCTCCAGCTTTTTCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR CCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGCAGCTCTGTCTGTGTaGCCTTTAGCGCTGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTAALSV*PLALNV Trigger: TACATTCAGCGCTAAAGGCCACACAGACAGAGCTGC...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TTCCTTTCTGGAAACCTTTTGGCTCACATGATAGTCACTGCATGGAGTGGCCGTGGAGGCTGCAGGTGCTaGAGGCCAGCTTCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSGNLLAHMIVTAWSGRGGCRC*RPASWL Trigger: GAGCCATGAAGCTGGCCTCCAGCACCTGCAGCCTCC...ACGGCCACTCCATGCAGTGACTATCATGTGAGCCAAAAGGTTTCCAGAAAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTCTGGCTCGCAGTGGCTaGCGAGGGCCGCTCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSLARSG*RGPLRR Trigger: CCTCCGGAGCGGCCCTCGCCAGCCACTGCGAGCCAG...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTTTATACTGTTCAAGTTaGCCATTTTCTCATGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FLALPSHRGEDEGRIPAPLYCSS*PFSHAA Trigger: GGCGGCATGAGAAAATGGCCAACTTGAACAGTATAA...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR CAA 72 bp | ATTCTGCCCTGCCCTATTGCTCTTGCGTCTTGGGGGTaGCCTCAGCTGTGTTGCCCAGGCTACTTCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILPCPIALASWG*PQLCCPGYFSN Trigger: ATTTGAGAAGTAGCCTGGGCAACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGGTTCCAGAATGTTCTTaGTGGCATCTTCCGAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMVPECS*WHLPRC Trigger: GCACCTCGGAAGATGCCATCAAGAACATTCTGGAAC...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
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| CDS-3UTR TCA 90 bp | GGAGGCAGAGGCAGGCAGATCTTTCTGAGTTCCAGGCCAGCCAGAGCTTTAAAGAACCCTCTTCCTGTTTaGTCTTCACCAGAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGRGRQIFLSSRPARALKNPLPV*SSPEPC Trigger: ACAGGGCTCTGGTGAAGATCAAACAGGAAGAGGGTT...CTTTAAAGCTCTGGCTGGCCTGGAACTCAGAAAGATCTGCCTGCCTCTGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR GCA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGATGGGACAGGGTCTGGTaGTTCAATCAATTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: AWLSSCLSGPHHIWEREGWDRVW*FNQLLI Trigger: TATAAGCAATTGATTGAAGCACCAGACCCTGTCCCA...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTTGGGACAGGGTCTGGTaGTTCAATCAATTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: DSSASYEQGHQKEEAAASWDRVW*FNQLLI Trigger: TATAAGCAATTGATTGAAGCACCAGACCCTGTCCCA...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCGCGGCGCCTGCACAGTaGTGCTGCTGCCGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFAAPAQ*CCCRCH Trigger: GTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGC...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCTCACTCAGCCACAGCTaGATACGCACAAAGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ADLGPEWPVPSNLKFIATSLSHS*IRTKGS Trigger: GGAGCCCTTTGTGCGTATGCAGCTGTGGCTGAGTGA...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR GCA 90 bp | GGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCACTAGGCTGGGCTTCTTGGCCTaGATGAGACTCAACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGLCDTTFAKGNISTSTRLGFLA*MRLNSW Trigger: CCAGGAGTTGAGTCTCATGCAGGCCAAGAAGCCCAG...CCTAGTGCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR CCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCCATCAGGACCCAGGCTaGGGCCCAGCAGGGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFHQDPG*GPAGAA Trigger: CGCAGCCCCTGCTGGGCCCCAGCCTGGGTCCTGATG...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TTCCTTTCTGGAAACCTTTTGGCTCACATGATAGTCACTGCATGGAGTGGCCGTCATCTTCCGAGGTGCTaGAGGAGGCTGTGCCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSGNLLAHMIVTAWSGRHLPRC*RRLCRW Trigger: CCAACGGCACAGCCTCCTCCAGCACCTCGGAAGATG...ACGGCCACTCCATGCAGTGACTATCATGTGAGCCAAAAGGTTTCCAGAAAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| 3UTR CAA 72 bp | CTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTaGCCTCTCTGGACCCCACCACATCTGGGAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNFVVHICMAEF*PLWTPPHLGEG Trigger: TCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| 3UTR CAA 72 bp | GGTTATCTTGGACAAAGTCCATTCTGCCCTGCCCTATaGCTCTTGCGTCTTGGGGGTTGCCTCAGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GYLGQSPFCPAL*LLRLGGCLSCV Trigger: AACACAGCTGAGGCAACCCCCAAGACGCAAGAGCAATAGGGCAGGGCAGAATGGACTTTGTCCAAGATAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
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| CDS-3UTR GCA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGTCATCCGACAGGAACTaGTTCATCTTGATGAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSENVVPFWPCLPTGARMSSDRN*FILMKG Trigger: GCCCTTCATCAAGATGAAGCAGTTCCTGTCGGATGA...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
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| CDS-3UTR GCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGCGCCTGCACAGTGCTaGTGCTGCCGCTGCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEAPAQC*CCRCHH Trigger: GTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR GCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCCCACCATCTCCTGGATaGCCCCCGCAGCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFPPSPG*PPQPGC Trigger: GCAGCCAGGCTGCGGGGGGCATCCAGGAGATGGTGG...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TTCCTTTCTGGAAACCTTTTGGCTCACATGATAGTCACTGCATGGAGTGGCCGTCCCAGAGGGTGGGTATaGTCCTCTTTGGGGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSGNLLAHMIVTAWSGRPRGWV*SSLGPS Trigger: AGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGG...ACGGCCACTCCATGCAGTGACTATCATGTGAGCCAAAAGGTTTCCAGAAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | CATTTAGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGTCTGCTCTCTGGCACTaGGTGGCTCTGGGCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLESFGLSLCNTGSGRALSALWH*VALGTS Trigger: AGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCAGA...CAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATAGCTACCAGGTAAGGAAATATATAGCCATCCCCACCTTACAGCTGGGGCTATGGCCTCGGACTTaGCAGCTAGCTGCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYSYQVRKYIAIPTLQLGLWPRT*QLAAAP Trigger: TGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAG...CCCCAGCTGTAAGGTGGGGATGGCTATATATTTCCTTACCTGGTAGCTATAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCGAGCTGATGGAGGCTTaGCACCACCGTAGAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPSRSYRCHGQRRSLFELMEA*HHRRKS Trigger: CGACTTTCTACGGTGGTGCCAAGCCTCCATCAGCTC...GAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCCATTCTGGCTCGCAGTaGCTGGCGAGGGCCGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFHSGSQ*LARAAP Trigger: CGGAGCGGCCCTCGCCAGCCACTGCGAGCCAGAATG...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGGGGTGGGCTCTCTGTaGGTGTGGCCTGGCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEGVGSL*VWPGVR Trigger: CCTGACGCCAGGCCACACCCACAGAGAGCCCACCCC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTCGGGGCTCTGTGGGGTaGGCTCTCTGTGGGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSRGSVG*ALCGCG Trigger: GCCACACCCACAGAGAGCCCACCCCACAGAGCCCCG...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAAAAAGCTGGAGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATGGGCGGCTGTGTCACCAGTaGGGCTGGTACTCGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TEKAGDSKVDTEAVSSNGRLCHQ*GWYSAL Trigger: AAGTGCCGAGTACCAGCCCCACTGGTGACACAGCCG...CCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCTCCAGCTTTTTCCGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTATACTGTTCAAGTTaGCCATTTTCTCATGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NVVPFWPCLPTGARMRAGLYCSS*PFSHAA Trigger: GGCGGCATGAGAAAATGGCCAACTTGAACAGTATAA...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTTGGGACAGGGTCTGGTaGTTCAATCAATTGCTTATA | + |
|
Preference number: 4 (lower is better) Translates to: LRAGPSERRGGGICSHTTWDRVW*FNQLLI Trigger: TATAAGCAATTGATTGAAGCACCAGACCCTGTCCCA...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTACAGCAAGCGGCGCCTaGACAGTGCTGCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSTASGA*TVLLLP Trigger: CGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGT...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTTTATAGCTACCAGGTAAGGAAATATATAGCCATCCCCACCTTACAGCTGGGGGGATCTCTCTGTCCTTaGAGGCCAGAGCTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VYSYQVRKYIAIPTLQLGGSLCP*RPELPP Trigger: TGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCC...CCCCAGCTGTAAGGTGGGGATGGCTATATATTTCCTTACCTGGTAGCTATAAAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACACATCAGGACCCAGGCTaGGGCCCAGCAGGGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTHQDPG*GPAGAA Trigger: CGCAGCCCCTGCTGGGCCCCAGCCTGGGTCCTGATG...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCACACCCAGGGAGGAGCTaGCCCGGCCTTCGGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAHPGRS*PGLRAA Trigger: AGCAGCCCGAAGGCCGGGCCAGCTCCTCCCTGGGTG...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTGGACCTCTTCCCGGTTaGCAGCCCTCTCCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSGPLPG*QPSPAG Trigger: ACCGGCTGGAGAGGGCTGCCAACCGGGAAGAGGTCC...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTCTGTGCCGTTGGGGATaGTCACGGAGGCTGGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSLCRWG*SRRLGS Trigger: ACTCCCCAGCCTCCGTGAGCATCCCCAACGGCACAG...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GTTTATAGCTACCAGGTAAGGAAATATATAGCCATCCCCACCTTACAGCTGGGGGCTGCTGATTCTCCTTaGTGCTTTCCAGCGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYSYQVRKYIAIPTLQLGAADSP*CFPATG Trigger: GCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGCAGC...CCCCAGCTGTAAGGTGGGGATGGCTATATATTTCCTTACCTGGTAGCTATAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACACCACCATCTCCTGGATaGCCCCCGCAGCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTPPSPG*PPQPGC Trigger: GCAGCCAGGCTGCGGGGGGCATCCAGGAGATGGTGG...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCACCACCATCTCCTGGATaGCCCCCGCAGCCTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAPPSPG*PPQPGC Trigger: GCAGCCAGGCTGCGGGGGGCATCCAGGAGATGGTGG...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCCTCAACTCCTGGGGCTaGAAACACGGGCTGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFLNSWG*KHGLGH Trigger: GTGCCCCAGCCCGTGTTTGCAGCCCCAGGAGTTGAG...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GGACTAATGCTTGCCCTTTCTGGAAACAAGGAAGATGGAAGCCACAGTGTTCTCGCTGCCAAGGTGATGTaGACTTCTTGGAGACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLMLALSGNKEDGSHSVLAAKVM*TSWRPF Trigger: GAAGGGTCTCCAAGAAGTCCACATCACCTTGGCAGC...GAGAACACTGTGGCTTCCATCTTCCTTGTTTCCAGAAAGGGCAAGCATTAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | ACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCGCCTCGAGCTTTTCTTaGAGTTTCTCTATGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TPSPSRSYRCHGQRRSLFASSFS*SFSMAS Trigger: CGAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGC...GAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGGAGGCTGCAGGTGCTaGAGGCCAGCTTCATGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEGGCRC*RPASWL Trigger: GAGCCATGAAGCTGGCCTCCAGCACCTGCAGCCTCC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCACGGGTCTTCCGGGCCTaGCGGAGGTGGAAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSARVFRA*RRWKLR Trigger: CCTCAGCTTCCACCTCCGCCAGGCCCGGAAGACCCG...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACACGGGTCTTCCGGGCCTaGCGGAGGTGGAAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTRVFRA*RRWKLR Trigger: CCTCAGCTTCCACCTCCGCCAGGCCCGGAAGACCCG...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACACATTCTGGCTCGCAGTaGCTGGCGAGGGCCGCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTHSGSQ*LARAAP Trigger: CGGAGCGGCCCTCGCCAGCCACTGCGAGCCAGAATG...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGCGGGGCACGTATGCTaGATAGTAGGGCAGTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEAGHVC*IVGQSP Trigger: GGGCGACTGCCCTACTATCCAGCATACGTGCCCCGC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAGGGGTGGGCTCTCTGTaGGTGTGGCCTGGCGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTGVGSL*VWPGVR Trigger: CCTGACGCCAGGCCACACCCACAGAGAGCCCACCCC...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTCCCACATCCTGGGGCTaGCTGTCTCCATCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSPTSWG*LSPSTS Trigger: GGAGGTGGATGGAGACAGCCAGCCCCAGGATGTGGG...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR CAA 72 bp | GGTAGATACAGAGGCTGTCTCATCCAATGGGAACCTTaGTCGCTGGAGATCACAATCAGGATGCTGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRYRGCLIQWEP*SLEITIRMLEE Trigger: CTCTTCCAGCATCCTGATTGTGATCTCCAGCGACAAAGGTTCCCATTGGATGAGACAGCCTCTGTATCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CAA 72 bp | TTTACAACACTTCTGAGAACCAACTCTGACCCCATCTaGTGCCCAAGCTCCAGAACAAATGGGGACACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FTTLLRTNSDPI*CPSSRTNGDTQ Trigger: CTGGGTGTCCCCATTTGTTCTGGAGCTTGGGCACAAGATGGGGTCAGAGTTGGTTCTCAGAAGTGTTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | GGACTAATGCTTGCCCTTTCTGGAAACAAGGAAGATGGAAGCCACAGTGTTCTCATTCGGAGGTGGACTTaGAACTCAGAGGCTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLMLALSGNKEDGSHSVLIRRWT*NSEALS Trigger: ACTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAAT...GAGAACACTGTGGCTTCCATCTTCCTTGTTTCCAGAAAGGGCAAGCATTAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTCTATGGCCTCGGACTTaGCAGCTAGCTGCCGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSLWPRT*QLAAAP Trigger: TGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAG...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGCCAGCTCTGGGGACATaGCCACCATCTCCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEPALGT*PPSPGC Trigger: GCATCCAGGAGATGGTGGCCATGTCCCCAGAGCTGG...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTCGGCTGTGTCACCAGTaGGGCTGGTACTCGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSRLCHQ*GWYSAL Trigger: AAGTGCCGAGTACCAGCCCCACTGGTGACACAGCCG...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCAGCGATTTGGTTGGCTaGGACCTCCTCCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFSDLVG*DLLQLL Trigger: CAGGAGCTGGAGGAGGTCTCAGCCAACCAAATCGCT...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAGGGCTCCGTGCCCAGTaGGCCCTTGATGGAGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTGLRAQ*ALDGVI Trigger: GATGACTCCATCAAGGGCTCACTGGGCACGGAGCCC...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGCGGATTCTCGGGGTaGTGCTGCCTCGCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSACGFSG*CCLAAS Trigger: TGAGGCAGCGAGGCAGCATCACCCCGAGAATCCGCA...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGCTGGAGGAGGCTGTaGCGTTGGGGATGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSACWRRL*RWGCSR Trigger: CCGTGAGCATCCCCAACGGCACAGCCTCCTCCAGCA...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGATTGCTTCTGTGTTAGGGGAGGCCCTATCTTCAATCCCAAGCAGATCTTTTCTTGGGGGTTGTaGAATGAAGGACAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRDCFCVRGGPIFNPKQIFSWGL*NEGQSG Trigger: TCCAGACTGTCCTTCATTGCACAACCCCCAAGAAAA...GATCTGCTTGGGATTGAAGATAGGGCCTCCCCTAACACAGAAGCAATCTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAGTAGGCGCTGCCCACTaGGGTCAAAGCTGGGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAVGAAH*GQSWDA Trigger: AGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTAC...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCACCTCGTTCTGCTCTCTaGCACTGGGTGGCTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAPRSAL*HWVALG Trigger: GCCCAGAGCCACCCAGTGCCAGAGAGCAGAACGAGG...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAGGTCTTCCTCAGGGCTaGCCAGCAGCGCAGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAGLPQG*PAAQAS Trigger: AGAAGCCTGCGCTGCTGGCCAGCCCTGAGGAAGACC...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCACGATGGGGAGGAGGTTaGCTCCGTGGGACTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSARWGGG*LRGTGL Trigger: CAAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCG...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCCCCGACTTCTTTTACTaGGAGCCACCACCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFPDFFY*EPPPQP Trigger: AGGCTGAGGTGGTGGCTCTCAGTAAAAGAAGTCGGG...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GTGTATTTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGAATGGAGCTGTTGACTaGCGCCAGCTGCTCCCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VYFLFLNHYRMWSGRICLNGAVD*RQLLPK Trigger: CTTCGGGAGCAGCTGGCGTCAGTCAACAGCTCCATT...CAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAAATACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCAGTTGCTCCTTCACCTaGAAGGCGATCTCAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFSCSFT*KAISAV Trigger: CACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACT...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTTGGCTAGCTTCTCCTTaGCCTGGCGTGTCAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSWLASP*PGVSTP Trigger: TGGAGTTGACACGCCAGGTCAAGGAGAAGCTAGCCA...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATGGATTGGGTGTGCCTaGAAGAAAGGGCCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTWIGCA*KKGPWG Trigger: GCCCCAGGGCCCTTTCTTTCAGGCACACCCAATCCA...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAGGAGGAAGGGGCAGGTaGCACACATGTCGTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAGGRGR*HTCREV Trigger: GACCTCACGACATGTGTGTCACCTGCCCCTTCCTCC...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATGGCATCTTCCGAGGTaGTGGAGGAGGCTGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTWHLPR*WRRLCR Trigger: ACGGCACAGCCTCCTCCAGCACCTCGGAAGATGCCA...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTTGCTGCTGCTGCCGCTaGCACCACCGCCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSCCCCR*HHRHLP Trigger: AGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCA...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTGCTGCTGATTCTCCTTaGTGCTTTCCAGCGACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSAADSP*CFPATG Trigger: GCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGCAGC...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAAGCAGCTCTATGGTCTaGTGCGAGGGGTACGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSASSSMV*CEGYGS Trigger: CGAGCCGTACCCCTCGCAGCAGACCATAGAGCTGCT...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAGCCACCACCTCAGCCTaGAAGCTCTTCAGCACCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAATTSA*KLFSTG Trigger: TCCGGTGCTGAAGAGCTTCCAGGCTGAGGTGGTGGC...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTGGAGGCCAGCTTCATaGCTCTCAGGATGCTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFWRPAS*LSGCSA Trigger: AGCTGAGCATCCTGAGAGCCATGAAGCTGGCCTCCA...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCTTGGCCAGCGTCTGTaGGAGGCTGCAGGTGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSLGQRL*EAAGAG Trigger: TCCAGCACCTGCAGCCTCCCACAGACGCTGGCCAAG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGAGCTGATGGAGGCTTaGCACCACCGTAGAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEELMEA*HHRRKS Trigger: CGACTTTCTACGGTGGTGCCAAGCCTCCATCAGCTC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCGATGGGGAGGAGGTTaGCTCCGTGGGACTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSRWGGG*LRGTGL Trigger: CAAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAAGGCCCAGAGGCTCCTaGGACGTCTTTTCAGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTRPRGS*DVFSGS Trigger: GGAGCCTGAAAAGACGTCCCAGGAGCCTCTGGGCCT...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGCTGTTTCCCAGAGGGTaGGTATGCTCCTCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAELFPRG*VCSSLG Trigger: CCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAG...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR CAA 72 bp | ATTATGGTGTGGAAAAGGAGGTTTTCCAGGGCCTGTTaGATGTTGATCATCTGTAGCCTGGACTGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IMVWKRRFSRAC*MLIICSLDWVH Trigger: ATGCACCCAGTCCAGGCTACAGATGATCAACATCAAACAGGCCCTGGAAAACCTCCTTTTCCACACCATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| 3UTR CAA 72 bp | ATGCCTATAATCCCAGCACTCAGGAGAGAAGATCGGTaGTTTAGAGTCACCCTTCACTACAAAGTGAGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MPIIPALRREDR*FRVTLHYKVSP Trigger: CGGACTCACTTTGTAGTGAAGGGTGACTCTAAACAACCGATCTTCTCTCCTGAGTGCTGGGATTATAGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAAGCGATTTGGTTGGCTaGGACCTCCTCCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSASDLVG*DLLQLL Trigger: CAGGAGCTGGAGGAGGTCTCAGCCAACCAAATCGCT...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GTGTATTTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGAGTTGCTCCTTCACCTaGAAGGCGATCTCAGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VYFLFLNHYRMWSGRICLSCSFT*KAISAV Trigger: CACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACT...CAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAAATACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR TCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCGAAACTCAGAGGCTCTaGGTGAACCTGTTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFETQRL*VNLFPS Trigger: ACTGGGGAACAGGTTCACTCAGAGCCTCTGAGTTTC...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAACCTCCTCCAGCTCCTaGAGGGAATGTCGAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSATSSSS*RECRSC Trigger: GCAGCTTCGACATTCCCTGCAGGAGCTGGAGGAGGT...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGAGTCTGGATTGGGTGTaGCTGAAAGAAAGGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAESLDWV*LKERAL Trigger: CAGGGCCCTTTCTTTCAGGCACACCCAATCCAGACT...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCGCTGCCAAGGTGATGTaGACTTCTTGGAGACCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NNKRKRLNFVVHICMAEFAAKVM*TSWRPF Trigger: GAAGGGTCTCCAAGAAGTCCACATCACCTTGGCAGC...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCAGGATCTCTCTGTCCTTaGAGGCCAGAGCTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAGSLCP*RPELPP Trigger: TGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCC...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGCTCTAAGCTCTTCATaGGGGGCTTTTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEALSSS*GAFGPQ Trigger: CTGAGGACCAAAAGCCCCCCATGAAGAGCTTAGAGC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCGGCTGTGTCACCAGTaGGGCTGGTACTCGGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSRLCHQ*GWYSAL Trigger: AAGTGCCGAGTACCAGCCCCACTGGTGACACAGCCG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGGCCAATGTTGTGCTTaGGAAGTTGCTCCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEGQCCA*EVAPSP Trigger: AGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTTCACTCACGCTACCCTaGGACAGTCCCAGGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSSLTLP*DSPRTF Trigger: GAAGGTCCTGGGACTGTCTCAGGGTAGCGTGAGTGA...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTAACCCTCTTCCTGTTTaGTCTTCACCAGAGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSNPLPV*SSPEPC Trigger: ACAGGGCTCTGGTGAAGATCAAACAGGAAGAGGGTT...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAAGGGCCAGCACATTCTaGTCATCCGACAGGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTRASTF*SSDRNC Trigger: GCAGTTCCTGTCGGATGAGCAGAATGTGCTGGCCCT...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAATCTCCAGCAGGGCCTaGTGCTGGGCTTGCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTISSRA*CWACIS Trigger: AGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGAT...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTTTGCGGATGATCCGCTaGACAAATGCAGCGGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSLRMIR*TNAAGD Trigger: GTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAA...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATTCAAGCTCAGTTTGTaGCAGGGCTTGGGCCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTFKLSL*QGLGLD Trigger: GTCGAGGCCCAAGCCCTGGCACAAACTGAGCTTGAA...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATTCAAGCTCAGTTTGTaGCAGGGCTTGGGCCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSAFKLSL*QGLGLD Trigger: GTCGAGGCCCAAGCCCTGGCACAAACTGAGCTTGAA...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCACTCAGCCACAGCTaGATACGCACAAAGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTSLSHS*IRTKGS Trigger: GGAGCCCTTTGTGCGTATGCAGCTGTGGCTGAGTGA...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATCACTCAGCCACAGCTaGATACGCACAAAGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSASLSHS*IRTKGS Trigger: GGAGCCCTTTGTGCGTATGCAGCTGTGGCTGAGTGA...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCACTGGGGTCAAAGCTaGGACGCTGCAGTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSHWGQS*DAAVCR Trigger: ACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGCAGATCGTGATGTGGACTTCTTaGAGACCCTTCTGTCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLFLNHYRMWSGRICLQIVMWTS*RPFCLS Trigger: CGAGAGACAGAAGGGTCTCCAAGAAGTCCACATCAC...GATCTGCAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAGAGCTGATGGAGGCTTaGCACCACCGTAGAAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTELMEA*HHRRKS Trigger: CGACTTTCTACGGTGGTGCCAAGCCTCCATCAGCTC...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCACTGTTTCCCAGAGGGTaGGTATGCTCCTCTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLTLLSTSALFPRG*VCSSLG Trigger: CCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAG...TGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTTGTCACCAGTGGGGCTaGTACTCGGCACTTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSCHQWG*YSALWQ Trigger: CTGCCAAAGTGCCGAGTACCAGCCCCACTGGTGACA...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGCAGATCCTGAATGTAACACCTTaGTTTTCTCCTCTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLNHYRMWSGRICLQILNVTP*FSPLPP Trigger: GGGAGGCAGAGGAGAAAATCAAGGTGTTACATTCAG...GATCTGCAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GTGTATTTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGCGCTGGCCAATGTTGTaGTTGAGAAGTTGCTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VYFLFLNHYRMWSGRICLRWPML*LRSCSF Trigger: GAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCG...CAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAAATACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR GCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCTGGGCTTCTTGGCCTaGATGAGACTCAACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSLGFLA*MRLNSW Trigger: CCAGGAGTTGAGTCTCATGCAGGCCAAGAAGCCCAG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTGTATTTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGACTCTATCTCCTTCTTaGCCTGCTCCAGGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VYFLFLNHYRMWSGRICLTLSPS*PAPGCS Trigger: AGAGCATCCTGGAGCAGGCCAAGAAGGAGATAGAGT...CAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAAATACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CCA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTGTCTTGAGGTTGAGTTaGAAGGAGAGCAGCTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: TINVNGLTLLSTSAWLSSVLRLS*KESSSM Trigger: CATAGAGCTGCTCTCCTTCCAACTCAACCTCAAGAC...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTTTCTTGGGGGTTGTaGAATGAAGGACAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAEFSWGL*NEGQSG Trigger: TCCAGACTGTCCTTCATTGCACAACCCCCAAGAAAA...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAACTCTATCTCCTTCTTaGCCTGCTCCAGGATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QVTSDTTINVNGLTLLSTTLSPS*PAPGCS Trigger: AGAGCATCCTGGAGCAGGCCAAGAAGGAGATAGAGT...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCTCTAAGCTCTTCATaGGGGGCTTTTGGTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSALSSS*GAFGPQ Trigger: CTGAGGACCAAAAGCCCCCCATGAAGAGCTTAGAGC...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| 3UTR CAA 72 bp | ACTAGTGATACAACAATAAACGTAAACGGCTTAACTTaGTTGTCCACATCTGCATGGCTGAGTTCTTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSDTTINVNGLT*LSTSAWLSSCL Trigger: GAGGCAAGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CCA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTATACTGTTCAAGTTaGCCATTTTCTCATGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: YNNKRKRLNFVVHICMAELYCSS*PFSHAA Trigger: GGCGGCATGAGAAAATGGCCAACTTGAACAGTATAA...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR TCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCTGAATGTAACACCTTaGTTTTCTCCTCTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSLNVTP*FSPLPP Trigger: GGGAGGCAGAGGAGAAAATCAAGGTGTTACATTCAG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR GCA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTTTTTCTTGGGGGTTGTaGAATGAAGGACAGTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTSDTTINVNGLTLLSTSFSWGL*NEGQSG Trigger: TCCAGACTGTCCTTCATTGCACAACCCCCAAGAAAA...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 90 bp | GCTCGCAGTGGCTGGCGAGGGCCGCTCCGGAGGAGAGGGAGGCACTaGGCGGCCCCTGGGACCCGACTCCATCTCCAGCAGGGCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ARSGWRGPLRRRGRH*AAPGTRLHLQQGLL Trigger: CAGCAGGCCCTGCTGGAGATGGAGTCGGGTCCCAGGGGCCGCTCAGTGCCTCCCTCTCCTCCGGAGCGGCCCTCGCCAGCCACTGCGAGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 90 bp | CTGGCGAGGGCCGCTCCGGAGGAGAGGGAGGCACTGAGCGGCCCCTaGGACCCGACTCCATCTCCAGCAGGGCCTGCTGCTGGGCTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LARAAPEEREALSGP*DPTPSPAGPAAGLA Trigger: TGCAAGCCCAGCAGCAGGCCCTGCTGGAGATGGAGTCGGGTCCCAGGGGCCGCTCAGTGCCTCCCTCTCCTCCGGAGCGGCCCTCGCCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 90 bp | CTGGGGCTGCAAACACGGGCTGGGGCACTCGGAGTGCGCAGCCGGTaGCTCGCTGTCCGAGCCGGTGCCGATGAGCCCATAGCGGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LGLQTRAGALGVRSR*LAVRAGADEPIAAL Trigger: AAGCGCCGCTATGGGCTCATCGGCACCGGCTCGGACAGCGAGTCACCGGCTGCGCACTCCGAGTGCCCCAGCCCGTGTTTGCAGCCCCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGCTCCGGCCTCGGCCTaGAGCTCTCCCACCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LALPSHRGEDEGRIPAPPAPASA*SSPTLG Trigger: CCCCAGGGTGGGAGAGCTCAAGGCCGAGGCCGGAGC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | CAGGGGCGATGGTTGCCTCGTCCCCACGAGGCCAGGCTCGCCCATTaGGCTGTCCGGAGTAGCTGGAGGAGGAGGAGAGGGAGGGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: QGRWLPRPHEARLAH*AVRSSWRRRRGRAT Trigger: TGTCGCCCTCCCTCTCCTCCTCCTCCAGCTACTCCGGACAGCCCAATGGGCGAGCCTGGCCTCGTGGGGACGAGGCAACCATCGCCCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | AGACTCAACTCCTGGGGCTGCAAACACGGGCTGGGGCACTCGGAGTaGGCAGCCGGTGACTCGCTGTCCGAGCCGGTGCCGATGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLNSWGCKHGLGHSE*AAGDSLSEPVPMSP Trigger: TGGGCTCATCGGCACCGGCTCGGACAGCGAGTCACCGGCTGCGCACTCCGAGTGCCCCAGCCCGTGTTTGCAGCCCCAGGAGTTGAGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 90 bp | CCTCGGGACCTGGCAGGTGGTTACCGTTGGCTGGCGTGTGCCCCGTaGGACACGTCCCCTCGTTCTGCTCTCTGGCACTGGGTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRDLAGGYRWLACAP*DTSPRSALWHWVAL Trigger: CAGAGCCACCCAGTGCCAGAGAGCAGAACGAGGGGACGTGTCCCACGGGGCACACGCCAGCCAACGGTAACCACCTGCCAGGTCCCGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTGGGGCTGCGCAGGGCTaGGGGACAGCGGGTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: FLALPSHRGEDEGRIPAPGAAQG*GTAGLP Trigger: CGGAAGACCCGCTGTCCCCAAGCCCTGCGCAGCCCC...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGCTCCGGCCTCGGCCTaGAGCTCTCCCACCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: LPLWTPPHLGEGGRERGKAPASA*SSPTLG Trigger: CCCCAGGGTGGGAGAGCTCAAGGCCGAGGCCGGAGC...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | GGGACAAGACAGCAAGCGGCGCCTGCACAGTGCTGCTGCTGCCGCTaGCACCACCGCCATCTTCCTGCTTCACGCAGGTCAGGGCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GTRQQAAPAQCCCCR*HHRHLPASRRSGPH Trigger: ATGGGGCCCTGACCTGCGTGAAGCAGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGTCTTGTCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 90 bp | TGCAGCAAGGTGTCTGTCACGAGGGTGTCCTCGGGACCTGGCAGGTaGTTACCGTTGGCTGGCGTGTGCCCCGTGGGACACGTCCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CSKVSVTRVSSGPGR*LPLAGVCPVGHVPS Trigger: CGAGGGGACGTGTCCCACGGGGCACACGCCAGCCAACGGTAACCACCTGCCAGGTCCCGAGGACACCCTCGTGACAGACACCTTGCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS CCA 90 bp | CCGCAGCCTGGCTGCTTGAGAAGGGCTTCCCACCCAGGGAGGAGCTaGCCCGGCCTTCGGGCTGCTGATTCTCCTTGCTGCTTTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQPGCLRRASHPGRS*PGLRAADSPCCFPA Trigger: CGCTGGAAAGCAGCAAGGAGAATCAGCAGCCCGAAGGCCGGGCCAGCTCCTCCCTGGGTGGGAAGCCCTTCTCAAGCAGCCAGGCTGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 90 bp | GCCAGCACCACCCTGGGCTTCTTGGCCTGCATGAGACTCAACTCCTaGGGCTGCAAACACGGGCTGGGGCACTCGGAGTGCGCAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASTTLGFLACMRLNS*GCKHGLGHSECAAG Trigger: ACCGGCTGCGCACTCCGAGTGCCCCAGCCCGTGTTTGCAGCCCCAGGAGTTGAGTCTCATGCAGGCCAAGAAGCCCAGGGTGGTGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | ATGCAGCGGGGGACAAGACAGCAAGCGGCGCCTGCACAGTGCTGCTaGTGCCGCTGCCACCACCGCCATCTTCCTGCTTCACGCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MQRGTRQQAAPAQCC*CRCHHRHLPASRRS Trigger: TGACCTGCGTGAAGCAGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGTCTTGTCCCCCGCTGCAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | CAAATGCAGCGGGGGACAAGACAGCAAGCGGCGCCTGCACAGTGCTaGTGCTGCCGCTGCCACCACCGCCATCTTCCTGCTTCACGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QMQRGTRQQAAPAQC*CCRCHHRHLPASRR Trigger: CCTGCGTGAAGCAGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGTCTTGTCCCCCGCTGCATTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | GCACAAATGCAGCGGGGGACAAGACAGCAAGCGGCGCCTGCACAGTaGTGCTGCTGCCGCTGCCACCACCGCCATCTTCCTGCTTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: AQMQRGTRQQAAPAQ*CCCRCHHRHLPASR Trigger: GCGTGAAGCAGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGTCTTGTCCCCCGCTGCATTTGTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCAGGCGAATGGAGCTGTaGACTGACGCCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHRGEDEGRIPAPPTSRARRMEL*TDASCS Trigger: GGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCCT...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCGTGCCCAGTGAGCCCTaGATGGAGTCATCCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHRGEDEGRIPAPPTSRAVPSEP*MESSSE Trigger: CTCGGAGGATGACTCCATCAAGGGCTCACTGGGCAC...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTAGCTTACGCCACGGCTaGGGCCGGGCCAGGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASLDPTTSGRGREGEREGSLRHG*GRARIS Trigger: TGAGATCCTGGCCCGGCCCAAGCCGTGGCGTAAGCT...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGAGGACCTCTTCCCGGTaGGCAGCCCTCTCCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPLWTPPHLGEGGRERGKRTSSR*AALSSR Trigger: CCGGCTGGAGAGGGCTGCCAACCGGGAAGAGGTCCT...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | TGCTCTCTGGCACTGGGTGGCTCTGGGCACCTCTTCCACGCGATGTaGACGTCTTGTAGGCGCTGCCCACTGGGGTCAAAGCTGGGACGC | + |
|
Preference number: 5 (lower is better) Translates to: CSLALGGSGHLFHAM*TSCRRCPLGSKLGR Trigger: GCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGTGGAAGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | GGGGAACAGCAAGCCAGGCGAATGGAGCTGTTGACTGACGCCAGCTaGTCCCGAAGGCTTTCCACCTCACGCTGGGCAGCCTCTGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: GEQQARRMELLTDAS*SRRLSTSRWAASAR Trigger: GCGAGCAGAGGCTGCCCAGCGTGAGGTGGAAAGCCTTCGGGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCCTGGCTTGCTGTTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCAGGTCAGCGATTTGGTaGGCTGAGACCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SHRGEDEGRIPAPPTSRARSAIW*AETSSS Trigger: GCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCT...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGCGATGGGGAGGAGGTaGGCTCCGTGGGACTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHAMGRR*APWDWL Trigger: AAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCGC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGGCGTCAGGACATaGGGACCCCCACTCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLALPSHRGEDEGRIPAPPGVRT*GPPLGS Trigger: TGACCCGAGTGGGGGTCCCAATGTCCTGACGCCAGG...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 90 bp | GGAGGGCGACACGGAGGCATAGGGACGGCTGAGCAAACCACGGTCTaGTGCCCAGTGGTGGTCAAAGTAGCCGGCATCGCCGATCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: GGRHGGIGTAEQTTV*CPVVVKVAGIADLR Trigger: TCGGAGATCGGCGATGCCGGCTACTTTGACCACCACTGGGCATCAGACCGTGGTTTGCTCAGCCGTCCCTATGCCTCCGTGTCGCCCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 90 bp | TGGAGGAGGAGGAGAGGGAGGGCGACACGGAGGCATAGGGACGGCTaGGCAAACCACGGTCTGATGCCCAGTGGTGGTCAAAGTAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WRRRRGRATRRHRDG*ANHGLMPSGGQSSR Trigger: CCGGCTACTTTGACCACCACTGGGCATCAGACCGTGGTTTGCTCAGCCGTCCCTATGCCTCCGTGTCGCCCTCCCTCTCCTCCTCCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 90 bp | GGCACCTCTTCCACGCGATGTGCACGTCTTGTAGGCGCTGCCCACTaGGGTCAAAGCTGGGACGCTGCAGTCTGTCGTCTAGAGTCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTSSTRCARLVGAAH*GQSWDAAVCRLESA Trigger: CGCGGACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGTGGAAGAGGTGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATCTATGGCCTCGGACTaGGCAGCTAGCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSSMASD*AASCRS Trigger: GGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGTCTATGGCCTCGGACTaGGCAGCTAGCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLWTPPHLGEGGRERGKSMASD*AASCRS Trigger: GGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGA...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCGTGCCCAGTGAGCCCTaGATGGAGTCATCCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: FWPCLPTGARMRAGFQRLVPSEP*MESSSE Trigger: CTCGGAGGATGACTCCATCAAGGGCTCACTGGGCAC...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAAGCCGCTGCCCTAGGTaGTTGTCGGTGAGGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSSRCPR*LSVRTS Trigger: GGAGGTCCTCACCGACAACAACCTAGGGCAGCGGCT...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTAGTTTGTGCCAGGGCTaGGGCCTCGACAGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: LALPSHRGEDEGRIPAPPSLCQG*GLDSRS Trigger: AGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAACT...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTCCCTTCAAGCTCAGTTaGTGCCAGGGCTTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLDPTTSGRGREGEREGPFKLS*CQGLGL Trigger: GAGGCCCAAGCCCTGGCACAAACTGAGCTTGAAGGG...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTGGTACTCGGCACTTaGGCAGGTGGGGCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLALPSHRGEDEGRIPAPLVLGT*AGGAPG Trigger: ACCTGGTGCCCCACCTGCCAAAGTGCCGAGTACCAG...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACTGGTACTCGGCACTTaGGCAGGTGGGGCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSLVLGT*AGGAPG Trigger: ACCTGGTGCCCCACCTGCCAAAGTGCCGAGTACCAG...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACAGGACCTCTTCCCGGTaGGCAGCCCTCTCCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNRTSSR*AALSSR Trigger: CCGGCTGGAGAGGGCTGCCAACCGGGAAGAGGTCCT...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | GGCTCTGGGCACCTCTTCCACGCGATGTGCACGTCTTGTAGGCGCTaGCCACTGGGGTCAAAGCTGGGACGCTGCAGTCTGTCGTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSGHLFHAMCTSCRR*PLGSKLGRCSLSSR Trigger: TCTAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGTGGAAGAGGTGCCCAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | ATTCTTCTGCAGCAAGGTGTCTGTCACGAGGGTGTCCTCGGGACCTaGCAGGTGGTTACCGTTGGCTGGCGTGTGCCCCGTGGGACACGT | + |
|
Preference number: 5 (lower is better) Translates to: ILLQQGVCHEGVLGT*QVVTVGWRVPRGTR Trigger: ACGTGTCCCACGGGGCACACGCCAGCCAACGGTAACCACCTGCCAGGTCCCGAGGACACCCTCGTGACAGACACCTTGCTGCAGAAGAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | CTGTTGACTGACGCCAGCTGCTCCCGAAGGCTTTCCACCTCACGCTaGGCAGCCTCTGCTCGCTGGTTGGCCTTCTCCAGGTTCGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LLTDASCSRRLSTSR*AASARWLAFSRFVM Trigger: CATGACGAACCTGGAGAAGGCCAACCAGCGAGCAGAGGCTGCCCAGCGTGAGGTGGAAAGCCTTCGGGAGCAGCTGGCGTCAGTCAACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | GAAGCTGCTGGGCGTCCTTCAACAGCCTCAGGATCTCTCTGTCCTTaGAGGCCAGAGCTGCCTCCAGCCGCGGCCCTGAACACAGAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EAAGRPSTASGSLCP*RPELPPAAALNTEQ Trigger: TTGCTCTGTGTTCAGGGCCGCGGCTGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCTGAGGCTGTTGAAGGACGCCCAGCAGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | GAGCGGCCCCTGGGACCCGACTCCATCTCCAGCAGGGCCTGCTGCTaGGCTTGCATTTCTCGGCGGGCTTGTTCCAGAATGTTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ERPLGPDSISSRACC*ACISRRACSRMFLM Trigger: CATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGATGGAGTCGGGTCCCAGGGGCCGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | AAGGGCCCTGGGGCCAGCTCTGAGAGGTCACTGTTTCCCAGAGGGTaGGTATGCTCCTCTTTGGGGCCATCTTGCCCTCGGTCTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: KGPGASSERSLFPRG*VCSSLGPSCPRSGS Trigger: GGATCCAGACCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAGTGACCTCTCAGAGCTGGCCCCAGGGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAAGGCGAATGGAGCTGTaGACTGACGCCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSRRMEL*TDASCS Trigger: GGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCCT...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACAGGCGAATGGAGCTGTaGACTGACGCCAGCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHRRMEL*TDASCS Trigger: GGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCCT...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGGGAAGAAGACATCCTaGGCCACAAGCAGCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPLWTPPHLGEGGRERGKGKKTS*ATSSGS Trigger: CGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCC...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAGCGAGAAAGTCCTaGGCCCATCAGGACCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHTARKS*AHQDPG Trigger: GCCTGGGTCCTGATGGGCCAAGGACTTTCTCGCTGT...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGACAGCGAGAAAGTCCTaGGCCCATCAGGACCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEFLPLWTPPHLGEGGRETARKS*AHQDPG Trigger: GCCTGGGTCCTGATGGGCCAAGGACTTTCTCGCTGT...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACTTTCCCGTCTCCCCTTaGAAGGCAGCTGGGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHFPVSP*KAAGPI Trigger: GATGGGCCCAGCTGCCTTCAAAGGGGAGACGGGAAA...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACAGCTTACGCCACGGCTaGGGCCGGGCCAGGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNSLRHG*GRARIS Trigger: TGAGATCCTGGCCCGGCCCAAGCCGTGGCGTAAGCT...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACCCTTCAAGCTCAGTTaGTGCCAGGGCTTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSPFKLS*CQGLGL Trigger: GAGGCCCAAGCCCTGGCACAAACTGAGCTTGAAGGG...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACCCTGGCGTCAGGACATaGGGACCCCCACTCGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNPGVRT*GPPLGS Trigger: TGACCCGAGTGGGGGTCCCAATGTCCTGACGCCAGG...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTTGCCGCCGCTGCAAGTaGGGGTTCACCTTAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLALPSHRGEDEGRIPAPCRRCK*GFTLVL Trigger: CAGCACTAAGGTGAACCCCAACTTGCAGCGGCGGCA...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATGCCGCCGCTGCAAGTaGGGGTTCACCTTAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSCRRCK*GFTLVL Trigger: CAGCACTAAGGTGAACCCCAACTTGCAGCGGCGGCA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 90 bp | GCTGGGCAGCCTCTGCTCGCTGGTTGGCCTTCTCCAGGTTCGTCATaGTCAAGCCGACCTCATCGGCCTTGGAAGCAGCCTCCTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGQPLLAGWPSPGSS*SSRPHRPWKQPPHR Trigger: ACGATGAGGAGGCTGCTTCCAAGGCCGATGAGGTCGGCTTGATCATGACGAACCTGGAGAAGGCCAACCAGCGAGCAGAGGCTGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 90 bp | GGTCAAAGTAGCCGGCATCGCCGATCTCCGACTTCACCTTGCGGATaGTCCGCTGCACAAATGCAGCGGGGGACAAGACAGCAAGCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GQSSRHRRSPTSPCG*SAAQMQRGTRQQAA Trigger: CGCCGCTTGCTGTCTTGTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAAGGTGAAGTCGGAGATCGGCGATGCCGGCTACTTTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | CGCTCCAGGTCAGCGATTTGGTTGGCTGAGACCTCCTCCAGCTCCTaGAGGGAATGTCGAAGCTGCTGGGCGTCCTTCAACAGCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRSAIWLAETSSSS*RECRSCWASFNSLR Trigger: CCTGAGGCTGTTGAAGGACGCCCAGCAGCTTCGACATTCCCTGCAGGAGCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCTGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | ATCGCCGATCTCCGACTTCACCTTGCGGATGATCCGCTGCACAAATaGAGCGGGGGACAAGACAGCAAGCGGCGCCTGCACAGTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: IADLRLHLADDPLHK*SGGQDSKRRLHSAA Trigger: AGCAGCACTGTGCAGGCGCCGCTTGCTGTCTTGTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAAGGTGAAGTCGGAGATCGGCGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | ACGCGATGTGCACGTCTTGTAGGCGCTGCCCACTGGGGTCAAAGCTaGGACGCTGCAGTCTGTCGTCTAGAGTCCGCGCCACCTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: TRCARLVGAAHWGQS*DAAVCRLESAPPQM Trigger: CATTTGAGGTGGCGCGGACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | ATGGCCTCGGACTTGGCAGCTAGCTGCCGCTCCAGGTCAGCGATTTaGTTGGCTGAGACCTCCTCCAGCTCCTGCAGGGAATGTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MASDLAASCRSRSAI*LAETSSSSCRECRS Trigger: GCTTCGACATTCCCTGCAGGAGCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | CAGGGCTGGCCAGCAGCGCAGGCTTCTCCAGTAGGAACTTCTGTGTaGGGAAGAAGACATCCTTGGCCACAAGCAGCGGGTCGTCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QGWPAAQASPVGTSV*GRRHPWPQAAGRQA Trigger: AGCCTGACGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCCCACACAGAAGTTCCTACTGGAGAAGCCTGCGCTGCTGGCCAGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | GCTCTGAGAGGTCACTGTTTCCCAGAGGGTGGGTATGCTCCTCTTTaGGGCCATCTTGCCCTCGGTCTGGATCCCCCACATCCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALRGHCFPEGGYAPL*GHLALGLDPPHPGA Trigger: AGCCCCAGGATGTGGGGGATCCAGACCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAGTGACCTCTCAGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCATGGCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAAGGATCTCTCTGTCCTaGGAGGCCAGAGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWLSSCLSGPHHIWEREGRISLS*EARAAS Trigger: GGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCT...TCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGCCATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACAGGTCAGCGATTTGGTaGGCTGAGACCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHRSAIW*AETSSS Trigger: GCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCT...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTCTATGGCCTCGGACTaGGCAGCTAGCTGCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNSMASD*AASCRS Trigger: GGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGA...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAACAGATCATGGGGCTGCGCAGGGCTaGGGGACAGCGGGTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MPWAKEVTLQLAVVATDHGAAQG*GTAGLP Trigger: CGGAAGACCCGCTGTCCCCAAGCCCTGCGCAGCCCC...ATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | TCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTACGAGCAGGGCCTTGATGAAGGGCTCCTaGCCTTTCACCGTGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: SHRGEDEGRIPAPPTSRALMKGS*PFTVSL Trigger: TAAGCTCACGGTGAAAGGCAAGGAGCCCTTCATCAA...GGCCCTGCTCGTAGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCGCTCCGGCCTCGGCCTaGAGCTCTCCCACCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ADLGPEWPVPSNLKFIATAPASA*SSPTLG Trigger: CCCCAGGGTGGGAGAGCTCAAGGCCGAGGCCGGAGC...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGCGATGGGGAGGAGGTaGGCTCCGTGGGACTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SYEQGHQKEEAAASAHTQAMGRR*APWDWL Trigger: AAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCGC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACAGTTTGTGCCAGGGCTaGGGCCTCGACAGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHSLCQG*GLDSRS Trigger: AGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAACT...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | TGCACGTCTTGTAGGCGCTGCCCACTGGGGTCAAAGCTGGGACGCTaGAGTCTGTCGTCTAGAGTCCGCGCCACCTCAAATGATGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: CTSCRRCPLGSKLGR*SLSSRVRATSNDGT Trigger: TGTCCCATCATTTGAGGTGGCGCGGACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | CCCCTGGGACCCGACTCCATCTCCAGCAGGGCCTGCTGCTGGGCTTaGATTTCTCGGCGGGCTTGTTCCAGAATGTTCTTGATGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PLGPDSISSRACCWA*ISRRACSRMFLMAS Trigger: AGATGCCATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGATGGAGTCGGGTCCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | GTCAACTCCAGCGTGTCTACCTCCCGGTACATGTACAGTTCATACTaGTCGGGTGTCAGGGGCGGCACAGTGGGTTTGAGTGTGCGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNSSVSTSRYMYSSY*SGVRGGTVGLSVRG Trigger: GCCCCGCACACTCAAACCCACTGTGCCGCCCCTGACACCCGAGCAGTATGAACTGTACATGTACCGGGAGGTAGACACGCTGGAGTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | TTGGCTGAGACCTCCTCCAGCTCCTGCAGGGAATGTCGAAGCTGCTaGGCGTCCTTCAACAGCCTCAGGATCTCTCTGTCCTTGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAETSSSSCRECRSC*ASFNSLRISLSLEA Trigger: GGCCTCCAAGGACAGAGAGATCCTGAGGCTGTTGAAGGACGCCCAGCAGCTTCGACATTCCCTGCAGGAGCTGGAGGAGGTCTCAGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | TCCTCTTTGGGGCCATCTTGCCCTCGGTCTGGATCCCCCACATCCTaGGGCTGGCTGTCTCCATCCACCTCCAAACCCTCTTCCTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLGPSCPRSGSPTS*GWLSPSTSKPSSCL Trigger: CAAACAGGAAGAGGGTTTGGAGGTGGATGGAGACAGCCAGCCCCAGGATGTGGGGGATCCAGACCGAGGGCAAGATGGCCCCAAAGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGGCCTCGAGCTTTTCTaGGAGTTTCTCTATGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLDPTTSGRGREGEREGGLELF*EFLYGL Trigger: GAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGCC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTGTTGTGCTTGAGAAGTaGCTCCTTCACCTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LALPSHRGEDEGRIPAPPVVLEK*LLHLKG Trigger: GCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAAC...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAACGCGCTGGCCAATGTaGTGCTTGAGAAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSTRWPM*CLRSCS Trigger: GGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGT...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTTCGGTGAGGACCTCCTaGACTCTCTTGGTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLALPSHRGEDEGRIPAPSVRTS*TLLVME Trigger: CTCCATCACCAAGAGAGTCAAGGAGGTCCTCACCGA...AGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGACGCTGCCCTAGGTTGTaGTCGGTGAGGACCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVVPFWPCLPTGARMRAGRCPRL*SVRTSL Trigger: CAAGGAGGTCCTCACCGACAACAACCTAGGGCAGCG...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTAGCCGCTGCCCTAGGTaGTTGTCGGTGAGGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRAGPSERRGGGICSHTTSRCPR*LSVRTS Trigger: GGAGGTCCTCACCGACAACAACCTAGGGCAGCGGCT...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTAGTTTGTGCCAGGGCTaGGGCCTCGACAGCAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: DSSASYEQGHQKEEAAASSLCQG*GLDSRS Trigger: AGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAACT...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCCTATGACGGTGTTCGTCTaGAGGTTGAGTTGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LALPSHRGEDEGRIPAPPMTVFV*RLSWKE Trigger: CTCCTTCCAACTCAACCTCAAGACGAACACCGTCAT...AGGAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 90 bp | CTGCCTCGCTGCCTCACCTGGATGGTGCGCAGGGCCAGCACATTCTaGTCATCCGACAGGAACTGCTTCATCTTGATGAAGGGCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRCLTWMVRRASTF*SSDRNCFILMKGSL Trigger: CAAGGAGCCCTTCATCAAGATGAAGCAGTTCCTGTCGGATGAGCAGAATGTGCTGGCCCTGCGCACCATCCAGGTGAGGCAGCGAGGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | CAGGCTTCTCCAGTAGGAACTTCTGTGTGGGGAAGAAGACATCCTTaGCCACAAGCAGCGGGTCGTCAGGCTTGGCCAGCGTCTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QASPVGTSVWGRRHP*PQAAGRQAWPASVG Trigger: TCCCACAGACGCTGGCCAAGCCTGACGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCCCACACAGAAGTTCCTACTGGAGAAGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTGGTGATGTGGACTTCTaGGAGACCCTTCTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSASYEQGHQKEEAAASAGDVDF*ETLLSL Trigger: GAGAGACAGAAGGGTCTCCAAGAAGTCCACATCACC...AGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACAGGTCAGCGATTTGGTaGGCTGAGACCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNRSAIW*AETSSS Trigger: GCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCT...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACCCTTCAAGCTCAGTTaGTGCCAGGGCTTGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SYEQGHQKEEAAASAHTQPFKLS*CQGLGL Trigger: GAGGCCCAAGCCCTGGCACAAACTGAGCTTGAAGGG...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 90 bp | AACACGCGCTGGCCAATGTTGTGCTTGAGAAGTTGCTCCTTCACCTaGAAGGCGATCTCAGCCGTGTCCAGCTGCTCCTCCTCTGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NTRWPMLCLRSCSFT*KAISAVSSCSSSGP Trigger: TGGGCCAGAGGAGGAGCAGCTGGACACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGTGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 90 bp | CCTGGGCCTCGAGCTTTTCTTGGAGTTTCTCTATGGCCTCGGACTTaGCAGCTAGCTGCCGCTCCAGGTCAGCGATTTGGTTGGCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PGPRAFLGVSLWPRT*QLAAAPGQRFGWLR Trigger: TCTCAGCCAACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGCCCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTGCTGAATGTAACACCTaGATTTTCTCCTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASLDPTTSGRGREGEREGAECNT*IFSSAS Trigger: GGAGGCAGAGGAGAAAATCAAGGTGTTACATTCAGC...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGATCTCTCTGTCCTaGGAGGCCAGAGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSENVVPFWPCLPTGARMRISLS*EARAAS Trigger: GGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCT...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAGTTGTGCTTGAGAAGTaGCTCCTTCACCTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSVVLEK*LLHLKG Trigger: GCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAAC...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACACGCGCTGGCCAATGTaGTGCTTGAGAAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTSRAIRKKRRRHLLTHNTRWPM*CLRSCS Trigger: GGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGT...GTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACTTGATGAAGGGCTCCTaGCCTTTCACCGTGAGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHLMKGS*PFTVSL Trigger: TAAGCTCACGGTGAAAGGCAAGGAGCCCTTCATCAA...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAGACTCTATCTCCTTCTaGGCCTGCTCCAGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NVVPFWPCLPTGARMRAGDSISF*ACSRML Trigger: GAGCATCCTGGAGCAGGCCAAGAAGGAGATAGAGTC...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCCTCTGTTCCAGAATGTTCTaGATGGCATCTTCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FWPCLPTGARMRAGFQRLCSRMF*MASSEV Trigger: CACCTCGGAAGATGCCATCAAGAACATTCTGGAACA...GAGGCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCAACCTCCTTGACTCTCTaGGTGATGGAGTATGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSTSLTL*VMEYVS Trigger: GGACACATACTCCATCACCAAGAGAGTCAAGGAGGT...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGCAGAGGCAGGCAGATCTTTCTGAGTTCCAGGCCAGCCAGAGCTTTAAAGCGCTGCCCTAGGTTGTaGTCGGTGAGGACCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GGRGRQIFLSSRPARALKRCPRL*SVRTSL Trigger: CAAGGAGGTCCTCACCGACAACAACCTAGGGCAGCG...CTTTAAAGCTCTGGCTGGCCTGGAACTCAGAAAGATCTGCCTGCCTCTGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | GCTGAGTTCTTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGATGACGGTGTTCGTCTaGAGGTTGAGTTGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEFLPLWTPPHLGEGGREMTVFV*RLSWKE Trigger: CTCCTTCCAACTCAACCTCAAGACGAACACCGTCAT...CTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAAGAACTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACGAAGGACAGTCTGGATaGGGTGTGCCTGAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLRAGPSERRGGGICSHEGQSG*GVPERK Trigger: CTTTCTTTCAGGCACACCCAATCCAGACTGTCCTTC...GTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 90 bp | AGCTTTTCTTGGAGTTTCTCTATGGCCTCGGACTTGGCAGCTAGCTaGCGCTCCAGGTCAGCGATTTGGTTGGCTGAGACCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SFSWSFSMASDLAAS*RSRSAIWLAETSSS Trigger: GCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGAGAAACTCCAAGAAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTGCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGCTGAATGTAACACCTaGATTTTCTCCTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLWTPPHLGEGGRERGKAECNT*IFSSAS Trigger: GGAGGCAGAGGAGAAAATCAAGGTGTTACATTCAGC...CTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GGGAGTGGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCAGGATCTCTCTGTCCTaGGAGGCCAGAGCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSGGLCDTTFAKGNISTSRISLS*EARAAS Trigger: GGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCT...GCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCCACTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGACTCTATCTCCTTCTaGGCCTGCTCCAGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRAGPSERRGGGICSHTTDSISF*ACSRML Trigger: GAGCATCCTGGAGCAGGCCAAGAAGGAGATAGAGTC...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATGTTCCAGAATGTTCTaGATGGCATCTTCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSCSRMF*MASSEV Trigger: CACCTCGGAAGATGCCATCAAGAACATTCTGGAACA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTACCTCCTTGACTCTCTaGGTGATGGAGTATGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSSASYEQGHQKEEAAASTSLTL*VMEYVS Trigger: GGACACATACTCCATCACCAAGAGAGTCAAGGAGGT...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GATTCCAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGAAGGACAGTCTGGATaGGGTGTGCCTGAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: DSSASYEQGHQKEEAAASEGQSG*GVPERK Trigger: CTTTCTTTCAGGCACACCCAATCCAGACTGTCCTTC...AGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTGGAATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAGATTCGGAGGTGGACTaGAAACTCAGAGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVVPFWPCLPTGARMRAGDSEVD*KLRGSE Trigger: CTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAATC...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 90 bp | GTCCCAGCACATAGTGGCCAAACACGCGCTGGCCAATGTTGTGCTTaGGAAGTTGCTCCTTCACCTGAAAGGCGATCTCAGCCGTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VPAHSGQTRAGQCCA*EVAPSPERRSQPCP Trigger: TGGACACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGTGTTTGGCCACTATGTGCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGTTGTCGCAACAGATCATACAGCGAGAAAGTCCTaGGCCCATCAGGACCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: MPWAKEVTLQLAVVATDHTARKS*AHQDPG Trigger: GCCTGGGTCCTGATGGGCCAAGGACTTTCTCGCTGT...ATGATCTGTTGCGACAACAGCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | GGGGGCTACGGCGGACTAATGCTTGCCCTTTCTGGAAACAAGGAAGATGGAAGCTCGGTGAGGACCTCCTaGACTCTCTTGGTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGYGGLMLALSGNKEDGSSVRTS*TLLVME Trigger: CTCCATCACCAAGAGAGTCAAGGAGGTCCTCACCGA...GCTTCCATCTTCCTTGTTTCCAGAAAGGGCAAGCATTAGTCCGCCGTAGCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAACTGTGTTCGTCTTGAGGTaGAGTTGGAAGGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRAGPSERRGGGICSHTTVFVLR*SWKESS Trigger: GCTGCTCTCCTTCCAACTCAACCTCAAGACGAACAC...AGTTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | AATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGAATGACGGTGTTCGTCTaGAGGTTGAGTTGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NVVPFWPCLPTGARMRAGMTVFV*RLSWKE Trigger: CTCCTTCCAACTCAACCTCAAGACGAACACCGTCAT...TCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GCCTCTCTGGACCCCACCACATCTGGGAGAGGGAGGGAGGGAGAGAGGGAAGGTATTATACTGTTCAAGTaGGCCATTTTCTCATGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ASLDPTTSGRGREGEREGIILFK*AIFSCR Trigger: GCGGCATGAGAAAATGGCCAACTTGAACAGTATAAT...ACCTTCCCTCTCTCCCTCCCTCCCTCTCCCAGATGTGGTGGGGTCCAGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGAGGGCAGGATTCCAGCGCATTATACTGTTCAAGTaGGCCATTTTCTCATGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: PFWPCLPTGARMRAGFQRIILFK*AIFSCR Trigger: GCGGCATGAGAAAATGGCCAACTTGAACAGTATAAT...GCGCTGGAATCCTGCCCTCATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CATTTAGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGAGGACCTCTTCCCGGTaGGCAGCCCTCTCCAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HLESFGLSLCNTGSGRALRTSSR*AALSSR Trigger: CCGGCTGGAGAGGGCTGCCAACCGGGAAGAGGTCCT...CAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCGGGGCTGCGCAGGGCTaGGGGACAGCGGGTCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NNKRKRLNFVVHICMAEFGAAQG*GTAGLP Trigger: CGGAAGACCCGCTGTCCCCAAGCCCTGCGCAGCCCC...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCGACTCTATCTCCTTCTaGGCCTGCTCCAGGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HQADHTDAMGKGGHSSAGDSISF*ACSRML Trigger: GAGCATCCTGGAGCAGGCCAAGAAGGAGATAGAGTC...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CCCGCACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACGTGTTCGTCTTGAGGTaGAGTTGGAAGGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PALHHQADHTDAMGKGGHVFVLR*SWKESS Trigger: GCTGCTCTCCTTCCAACTCAACCTCAAGACGAACAC...GTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | TCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCACACACAAGCTGAATGTAACACCTaGATTTTCTCCTCTGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SYEQGHQKEEAAASAHTQAECNT*IFSSAS Trigger: GGAGGCAGAGGAGAAAATCAAGGTGTTACATTCAGC...TTGTGTGTGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTGAGTGAGAATGTGGTACCTTTTTGGCCCTGCCTTCCCACAGGGGCGAGGATGGTTGTGCTTGAGAAGTaGCTCCTTCACCTGAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LSENVVPFWPCLPTGARMVVLEK*LLHLKG Trigger: GCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAAC...CATCCTCGCCCCTGTGGGAAGGCAGGGCCAAAAAGGTACCACATTCTCACTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CCCGCACTCCATCACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACACCTCCTTGACTCTCTaGGTGATGGAGTATGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PALHHQADHTDAMGKGGHTSLTL*VMEYVS Trigger: GGACACATACTCCATCACCAAGAGAGTCAAGGAGGT...GTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTGATGGAGTGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAAAGCTGGAGATTCAAAGGTAGATACAGAGGCTGTCTCATCCAATGGGAGCCGCTGCCCTAGGTaGTTGTCGGTGAGGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TEKAGDSKVDTEAVSSNGSRCPR*LSVRTS Trigger: GGAGGTCCTCACCGACAACAACCTAGGGCAGCGGCT...CCCATTGGATGAGACAGCCTCTGTATCTACCTTTGAATCTCCAGCTTTTTCCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CAGCGCCTCCTACGAGCAGGGCCATCAGAAAGAAGAGGCGGCGGCATCTGCTCATGGTGCTTCAATCAATaGCTTATAAACACTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QRLLRAGPSERRGGGICSWCFNQ*LINTQE Trigger: TTCCTGAGTGTTTATAAGCAATTGATTGAAGCACCA...TGAGCAGATGCCGCCGCCTCTTCTTTCTGATGGCCCTGCTCGTAGGAGGCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CATTTAGAGTCTTTTGGACTTTCTCTTTGCAACACAGGCTCTGGAAGGGCACTGTTTCCCGTCTCCCCTTaGAAGGCAGCTGGGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: HLESFGLSLCNTGSGRALFPVSP*KAAGPI Trigger: GATGGGCCCAGCTGCCTTCAAAGGGGAGACGGGAAA...CAGTGCCCTTCCAGAGCCTGTGTTGCAAAGAGAAAGTCCAAAAGACTCTAAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS GCA 90 bp | TGGTGCTTCAATCAATTGCTTATAAACACTCAGGAACGCCGCCTCTaGCTCCCGACTTCTTTTACTGAGAGCCACCACCTCAGCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WCFNQLLINTQERRL*LPTSFTESHHLSLE Trigger: TTCCAGGCTGAGGTGGTGGCTCTCAGTAAAAGAAGTCGGGAGGCAGAGGCGGCGTTCCTGAGTGTTTATAAGCAATTGATTGAAGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000134326.2 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | AGGAGTGCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGGCCTCGAGCTTTTCTaGGAGTTTCTCTATGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RSADLGPEWPVPSNLKFIGLELF*EFLYGL Trigger: GAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGCC...TATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGCACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCAGCTTACGCCACGGCTaGGGCCGGGCCAGGATCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NNKRKRLNFVVHICMAEFSLRHG*GRARIS Trigger: TGAGATCCTGGCCCGGCCCAAGCCGTGGCGTAAGCT...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTCTGGAAACCTTTTGGCTCACATGATAGTCACTGCATGGAGTGGCCGTGGTGATGTGGACTTCTaGGAGACCCTTCTGTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSGNLLAHMIVTAWSGRGDVDF*ETLLSL Trigger: GAGAGACAGAAGGGTCTCCAAGAAGTCCACATCACC...ACGGCCACTCCATGCAGTGACTATCATGTGAGCCAAAAGGTTTCCAGAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGCCTTTGTGATACCACATTCGCTAAGGGCAACATCTCTACCAGCACTAGGTGTTCCAGAATGTTCTaGATGGCATCTTCCGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GGLCDTTFAKGNISTSTRCSRMF*MASSEV Trigger: CACCTCGGAAGATGCCATCAAGAACATTCTGGAACA...CCTAGTGCTGGTAGAGATGTTGCCCTTAGCGAATGTGGTATCACAAAGGCCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCGGGAAGAAGACATCCTaGGCCACAAGCAGCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: NNKRKRLNFVVHICMAEFGKKTS*ATSSGS Trigger: CGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCC...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGTGCCCAGTGAGCCCTaGATGGAGTCATCCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: YNNKRKRLNFVVHICMAEVPSEP*MESSSE Trigger: CTCGGAGGATGACTCCATCAAGGGCTCACTGGGCAC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAGCGATGGGGAGGAGGTaGGCTCCGTGGGACTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QVTSDTTINVNGLTLLSTAMGRR*APWDWL Trigger: AAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCGC...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | TTCCTTTCTGGAAACCTTTTGGCTCACATGATAGTCACTGCATGGAGTGGCCGTGAAGGACAGTCTGGATaGGGTGTGCCTGAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLSGNLLAHMIVTAWSGREGQSG*GVPERK Trigger: CTTTCTTTCAGGCACACCCAATCCAGACTGTCCTTC...ACGGCCACTCCATGCAGTGACTATCATGTGAGCCAAAAGGTTTCCAGAAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | GCTGACCTGGGACCAGAATGGCCAGTGCCCAGTAATCTGAAGTTTATAGCTACCATTATACTGTTCAAGTaGGCCATTTTCTCATGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ADLGPEWPVPSNLKFIATIILFK*AIFSCR Trigger: GCGGCATGAGAAAATGGCCAACTTGAACAGTATAAT...GGTAGCTATAAACTTCAGATTACTGGGCACTGGCCATTCTGGTCCCAGGTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CACCAAGCAGATCATACAGATGCCATGGGCAAAGGAGGTCACTCTTCAGCTGGCTGGTGCTTCAATCAATaGCTTATAAACACTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HQADHTDAMGKGGHSSAGWCFNQ*LINTQE Trigger: TTCCTGAGTGTTTATAAGCAATTGATTGAAGCACCA...GCCAGCTGAAGAGTGACCTCCTTTGCCCATGGCATCTGTATGATCTGCTTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCTGGTACTCGGCACTTaGGCAGGTGGGGCACCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTSDTTINVNGLTLLSTSLVLGT*AGGAPG Trigger: ACCTGGTGCCCCACCTGCCAAAGTGCCGAGTACCAG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGGGAAGAAGACATCCTaGGCCACAAGCAGCGGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: VTSDTTINVNGLTLLSTSGKKTS*ATSSGS Trigger: CGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCC...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTTTTCCCGTCTCCCCTTaGAAGGCAGCTGGGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VTSDTTINVNGLTLLSTSFPVSP*KAAGPI Trigger: GATGGGCCCAGCTGCCTTCAAAGGGGAGACGGGAAA...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS-3UTR CAA 90 bp | GTGTATTTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGACGCGCTGGCCAATGTaGTGCTTGAGAAGTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VYFLFLNHYRMWSGRICLTRWPM*CLRSCS Trigger: GGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGT...CAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAAATACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | GTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTCGCTGCCCTAGGTTGTaGTCGGTGAGGACCTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTSDTTINVNGLTLLSTSRCPRL*SVRTSL Trigger: CAAGGAGGTCCTCACCGACAACAACCTAGGGCAGCG...AGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | AACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCGTGTTCGTCTTGAGGTaGAGTTGGAAGGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: NNKRKRLNFVVHICMAEFVFVLR*SWKESS Trigger: GCTGCTCTCCTTCCAACTCAACCTCAAGACGAACAC...GAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGGATTCGGAGGTGGACTaGAAACTCAGAGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YNNKRKRLNFVVHICMAEDSEVD*KLRGSE Trigger: CTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAATC...CTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTTTAAACCACTATAGGATGTGGAGTGGACGGATCTGTTTGCAGATCGATTCGGAGGTGGACTaGAAACTCAGAGGCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFLNHYRMWSGRICLQIDSEVD*KLRGSE Trigger: CTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAATC...GATCTGCAAACAGATCCGTCCACTCCACATCCTATAGTGGTTTAAAAAGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111752.10 |
||
| CDS-3UTR CAA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCGGTGAGGACCTCCTaGACTCTCTTGGTGATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QVTSDTTINVNGLTLLSTSVRTS*TLLVME Trigger: CTCCATCACCAAGAGAGTCAAGGAGGTCCTCACCGA...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | CAGGTAACTAGTGATACAACAATAAACGTAAACGGCTTAACTTTGTTGTCCACAGGCCTCGAGCTTTTCTaGGAGTTTCTCTATGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVTSDTTINVNGLTLLSTGLELF*EFLYGL Trigger: GAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGCC...TGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGTTGTATCACTAGTTACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS-3UTR CAA 90 bp | ACAATAAACGTAAACGGCTTAACTTTGTTGTCCACATCTGCATGGCTGAGTTCTTGGTGCTTCAATCAATaGCTTATAAACACTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TINVNGLTLLSTSAWLSSWCFNQ*LINTQE Trigger: TTCCTGAGTGTTTATAAGCAATTGATTGAAGCACCA...AGAACTCAGCCATGCAGATGTGGACAACAAAGTTAAGCCGTTTACGTTTATTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 72 bp | GCCCGCCGCCCACCTCCGGGGCTCCGGCCTCGGCCTTaGGCTCTCCCACCCTGGGGGCCTCGTCCTCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARRPPPGLRPRP*ALPPWGPRPRP Trigger: TGGGCGAGGACGAGGCCCCCAGGGTGGGAGAGCTCAAGGCCGAGGCCGGAGCCCCGGAGGTGGGCGGCGGGC 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GGCGATGGGGAGGAGGTTGGCTCCGTGGGACTGGCTTaGCTAGCGCTGGGCTGCTGGGTTGGGGCTTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GDGEEVGSVGLA*LALGCWVGAWP Trigger: GGGCCAAGCCCCAACCCAGCAGCCCAGCGCTAGCCAAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 72 bp | AGGCGATGGGGAGGAGGTTGGCTCCGTGGGACTGGCTaGGCTAGCGCTGGGCTGCTGGGTTGGGGCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRWGGGWLRGTG*ASAGLLGWGLA Trigger: GGCCAAGCCCCAACCCAGCAGCCCAGCGCTAGCCAAGCCAGTCCCACGGAGCCAACCTCCTCCCCATCGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | CGGGGGACAAGACAGCAAGCGGCGCCTGCACAGTGCTaGTGCTGCCGCTGCCACCACCGCCATCTTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RGTRQQAAPAQC*CCRCHHRHLPA Trigger: AGCAGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTGTCTTGTCCCCCG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | GGGCGGCACAGTGGGTTTGAGTGTGCGGGGCACGTATaGTGGATAGTAGGGCAGTCGCCCGCCGCCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: GRHSGFECAGHV*WIVGQSPAAHL Trigger: GAGGTGGGCGGCGGGCGACTGCCCTACTATCCAGCATACGTGCCCCGCACACTCAAACCCACTGTGCCGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GGTGTCCTCGGGACCTGGCAGGTGGTTACCGTTGGCTaGCGTGTGCCCCGTGGGACACGTCCCCTCGTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVLGTWQVVTVG*RVPRGTRPLVL Trigger: CAGAACGAGGGGACGTGTCCCACGGGGCACACGCCAGCCAACGGTAACCACCTGCCAGGTCCCGAGGACACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | CGGCACAGTGGGTTTGAGTGTGCGGGGCACGTATGCTaGATAGTAGGGCAGTCGCCCGCCGCCCACCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RHSGFECAGHVC*IVGQSPAAHLR Trigger: CCGGAGGTGGGCGGCGGGCGACTGCCCTACTATCCAGCATACGTGCCCCGCACACTCAAACCCACTGTGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | CAGCAAGCGGCGCCTGCACAGTGCTGCTGCTGCCGCTaGCACCACCGCCATCTTCCTGCTTCACGCAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: QQAAPAQCCCCR*HHRHLPASRRS Trigger: TGACCTGCGTGAAGCAGGAAGATGGCGGTGGTGGCAGCGGCAGCAGCAGCACTGTGCAGGCGCCGCTTGCTG 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | AGCTGGCCCGGCCTTCGGGCTGCTGATTCTCCTTGCTaGTTTCCAGCGACAGGCCCAGAGGCTCCTGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SWPGLRAADSPC*FPATGPEAPGT Trigger: CGTCCCAGGAGCCTCTGGGCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGCAGCCCGAAGGCCGGGCCAGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | AGGAGCTGGCCCGGCCTTCGGGCTGCTGATTCTCCTTaGTGCTTTCCAGCGACAGGCCCAGAGGCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSWPGLRAADSP*CFPATGPEAPG Trigger: CCCAGGAGCCTCTGGGCCTGTCGCTGGAAAGCAGCAAGGAGAATCAGCAGCCCGAAGGCCGGGCCAGCTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | TCGGCGGGCGCCAGCACCACCCTGGGCTTCTTGGCCTaGATGAGACTCAACTCCTGGGGCTGCAAACACGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGASTTLGFLA*MRLNSWGCKHG Trigger: CCCGTGTTTGCAGCCCCAGGAGTTGAGTCTCATGCAGGCCAAGAAGCCCAGGGTGGTGCTGGCGCCCGCCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | TGTGCCCCGTGGGACACGTCCCCTCGTTCTGCTCTCTaGCACTGGGTGGCTCTGGGCACCTCTTCCACGCGA | + |
|
Preference number: 6 (lower is better) Translates to: CAPWDTSPRSAL*HWVALGTSSTR Trigger: TCGCGTGGAAGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCAGAACGAGGGGACGTGTCCCACGGGGCACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GACGCCAGCTGCTCCCGAAGGCTTTCCACCTCACGCTaGGCAGCCTCTGCTCGCTGGTTGGCCTTCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DASCSRRLSTSR*AASARWLAFSR Trigger: CCTGGAGAAGGCCAACCAGCGAGCAGAGGCTGCCCAGCGTGAGGTGGAAAGCCTTCGGGAGCAGCTGGCGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 72 bp | CGTCCGAGCCTGTCTCAGGTGTGCGGATTCTCGGGGTaGTGCTGCCTCGCTGCCTCACCTGGATGGTGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RPSLSQVCGFSG*CCLAASPGWCA Trigger: TGCGCACCATCCAGGTGAGGCAGCGAGGCAGCATCACCCCGAGAATCCGCACACCTGAGACAGGCTCGGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | CTTCCGAGGTGCTGGAGGAGGCTGTGCCGTTGGGGATaGTCACGGAGGCTGGGGAGTTCTTGGACTCACCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPRCWRRLCRWG*SRRLGSSWTHP Trigger: GGGGTGAGTCCAAGAACTCCCCAGCCTCCGTGAGCATCCCCAACGGCACAGCCTCCTCCAGCACCTCGGAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | CCCTGGCCCTGGCCCAGCTGGTCCGACAGCCACAACTaGATCCGGATAAAAGGCTCCCGGCCCTTCTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PWPWPSWSDSHN*IRIKGSRPFCV Trigger: GACACAGAAGGGCCGGGAGCCTTTTATCCGGATGCAGTTGTGGCTGTCGGACCAGCTGGGCCAGGGCCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | GGGACACGTCCCCTCGTTCTGCTCTCTGGCACTGGGTaGCTCTGGGCACCTCTTCCACGCGATGTGCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: GTRPLVLLSGTG*LWAPLPRDVHV Trigger: GACGTGCACATCGCGTGGAAGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCAGAACGAGGGGACGTGTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | CCGTGGGACACGTCCCCTCGTTCTGCTCTCTGGCACTaGGTGGCTCTGGGCACCTCTTCCACGCGATGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: PWDTSPRSALWH*VALGTSSTRCA Trigger: TGCACATCGCGTGGAAGAGGTGCCCAGAGCCACCCAGTGCCAGAGAGCAGAACGAGGGGACGTGTCCCACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | GGGCGTCCTTCAACAGCCTCAGGATCTCTCTGTCCTTaGAGGCCAGAGCTGCCTCCAGCCGCGGCCCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GRPSTASGSLCP*RPELPPAAALN Trigger: GTTCAGGGCCGCGGCTGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCTGAGGCTGTTGAAGGACGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GCTCCCGGCCCTTCAAGCTCAGTTTGTGCCAGGGCTTaGGCCTCGACAGCAGATCTGACACGGAGCCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APGPSSSVCARA*ASTADLTRSPG Trigger: CCCAGGGCTCCGTGTCAGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAACTGAGCTTGAAGGGCCGGGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 72 bp | GGCTCCCGGCCCTTCAAGCTCAGTTTGTGCCAGGGCTaGGGCCTCGACAGCAGATCTGACACGGAGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRPFKLSLCQG*GLDSRSDTEPW Trigger: CCAGGGCTCCGTGTCAGATCTGCTGTCGAGGCCCAAGCCCTGGCACAAACTGAGCTTGAAGGGCCGGGAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | GCACTGGGTGGCTCTGGGCACCTCTTCCACGCGATGTaGACGTCTTGTAGGCGCTGCCCACTGGGGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALGGSGHLFHAM*TSCRRCPLGSK Trigger: CTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGTGGAAGAGGTGCCCAGAGCCACCCAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | CAAGCCAGGCGAATGGAGCTGTTGACTGACGCCAGCTaGTCCCGAAGGCTTTCCACCTCACGCTGGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QARRMELLTDAS*SRRLSTSRWAA Trigger: GGCTGCCCAGCGTGAGGTGGAAAGCCTTCGGGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCCTGGCTTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | TCAGGTGTGCGGATTCTCGGGGTGATGCTGCCTCGCTaGCTCACCTGGATGGTGCGCAGGGCCAGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: SGVRILGVMLPR*LTWMVRRASTF Trigger: GAATGTGCTGGCCCTGCGCACCATCCAGGTGAGGCAGCGAGGCAGCATCACCCCGAGAATCCGCACACCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GCACGTCTTGTAGGCGCTGCCCACTGGGGTCAAAGCTaGGACGCTGCAGTCTGTCGTCTAGAGTCCGCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ARLVGAAHWGQS*DAAVCRLESAP Trigger: TGGCGCGGACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GGGCCATCTTGCCCTCGGTCTGGATCCCCCACATCCTaGGGCTGGCTGTCTCCATCCACCTCCAAACCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPSCPRSGSPTS*GWLSPSTSKPS Trigger: AGAGGGTTTGGAGGTGGATGGAGACAGCCAGCCCCAGGATGTGGGGGATCCAGACCGAGGGCAAGATGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 72 bp | TGGGCGTCCTTCAACAGCCTCAGGATCTCTCTGTCCTaGGAGGCCAGAGCTGCCTCCAGCCGCGGCCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: WASFNSLRISLS*EARAASSRGPE Trigger: TTCAGGGCCGCGGCTGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCTGAGGCTGTTGAAGGACGCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 72 bp | AAGACATCCTTGGCCACAAGCAGCGGGTCGTCAGGCTaGGCCAGCGTCTGTGGGAGGCTGCAGGTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: KTSLATSSGSSG*ASVCGRLQVLE Trigger: CTCCAGCACCTGCAGCCTCCCACAGACGCTGGCCAAGCCTGACGACCCGCTGCTTGTGGCCAAGGATGTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 90 bp | CGAAGCTGCTGGGCGTCCTTCAACAGCCTCAGGATCTCTCTGTCCTaGGAGGCCAGAGCTGCCTCCAGCCGCGGCCCTGAACACAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSCWASFNSLRISLS*EARAASSRGPEHRA Trigger: TGCTCTGTGTTCAGGGCCGCGGCTGGAGGCAGCTCTGGCCTCCAAGGACAGAGAGATCCTGAGGCTGTTGAAGGACGCCCAGCAGCTTCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 72 bp | GGGGGAACAGCAAGCCAGGCGAATGGAGCTGTTGACTaGCGCCAGCTGCTCCCGAAGGCTTTCCACCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: GGTASQANGAVD*RQLLPKAFHLT Trigger: CGTGAGGTGGAAAGCCTTCGGGAGCAGCTGGCGTCAGTCAACAGCTCCATTCGCCTGGCTTGCTGTTCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 72 bp | CACGGAGGCATAGGGACGGCTGAGCAAACCACGGTCTaGTGCCCAGTGGTGGTCAAAGTAGCCGGCATCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HGGIGTAEQTTV*CPVVVKVAGIA Trigger: GGCGATGCCGGCTACTTTGACCACCACTGGGCATCAGACCGTGGTTTGCTCAGCCGTCCCTATGCCTCCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS TCA 72 bp | AGGAGAGGGAGGGCGACACGGAGGCATAGGGACGGCTaGGCAAACCACGGTCTGATGCCCAGTGGTGGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RRGRATRRHRDG*ANHGLMPSGGQ Trigger: TTGACCACCACTGGGCATCAGACCGTGGTTTGCTCAGCCGTCCCTATGCCTCCGTGTCGCCCTCCCTCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | CACCTCTTCCACGCGATGTGCACGTCTTGTAGGCGCTaGCCACTGGGGTCAAAGCTGGGACGCTGCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLFHAMCTSCRR*PLGSKLGRCSL Trigger: CAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGTGGAAGAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | CTCCGACTTCACCTTGCGGATGATCCGCTGCACAAATaGAGCGGGGGACAAGACAGCAAGCGGCGCCTGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRLHLADDPLHK*SGGQDSKRRLH Trigger: GTGCAGGCGCCGCTTGCTGTCTTGTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAAGGTGAAGTCGGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | TGGCATCTTCCGAGGTGCTGGAGGAGGCTGTGCCGTTaGGGATGCTCACGGAGGCTGGGGAGTTCTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: WHLPRCWRRLCR*GCSRRLGSSWT Trigger: AGTCCAAGAACTCCCCAGCCTCCGTGAGCATCCCCAACGGCACAGCCTCCTCCAGCACCTCGGAAGATGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CCA 72 bp | GGGGCCAGCTCTGAGAGGTCACTGTTTCCCAGAGGGTaGGTATGCTCCTCTTTGGGGCCATCTTGCCCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GASSERSLFPRG*VCSSLGPSCPR Trigger: CCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAGTGACCTCTCAGAGCTGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 72 bp | ATGGCATCTTCCGAGGTGCTGGAGGAGGCTGTGCCGTaGGGGATGCTCACGGAGGCTGGGGAGTTCTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MASSEVLEEAVP*GMLTEAGEFLD Trigger: GTCCAAGAACTCCCCAGCCTCCGTGAGCATCCCCAACGGCACAGCCTCCTCCAGCACCTCGGAAGATGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 72 bp | GTGGGCTCTCTGTGGGTGTGGCCTGGCGTCAGGACATaGGGACCCCCACTCGGGTCAAAGTCAGGATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: VGSLWVWPGVRT*GPPLGSKSGSS Trigger: GGATGATCCTGACTTTGACCCGAGTGGGGGTCCCAATGTCCTGACGCCAGGCCACACCCACAGAGAGCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 90 bp | GCCCCTGGGACCCGACTCCATCTCCAGCAGGGCCTGCTGCTGGGCTaGCATTTCTCGGCGGGCTTGTTCCAGAATGTTCTTGATGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: APGTRLHLQQGLLLG*HFSAGLFQNVLDGI Trigger: GATGCCATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGATGGAGTCGGGTCCCAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | AGCCGGCATCGCCGATCTCCGACTTCACCTTGCGGATaGTCCGCTGCACAAATGCAGCGGGGGACAAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: SRHRRSPTSPCG*SAAQMQRGTRQ Trigger: CTGTCTTGTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAAGGTGAAGTCGGAGATCGGCGATGCCGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | CATACTGCTCGGGTGTCAGGGGCGGCACAGTGGGTTTaGGTGTGCGGGGCACGTATGCTGGATAGTAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HTARVSGAAQWV*VCGARMLDSRA Trigger: TGCCCTACTATCCAGCATACGTGCCCCGCACACTCAAACCCACTGTGCCGCCCCTGACACCCGAGCAGTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | TGTAGGCGCTGCCCACTGGGGTCAAAGCTGGGACGCTaGAGTCTGTCGTCTAGAGTCCGCGCCACCTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: CRRCPLGSKLGR*SLSSRVRATSN Trigger: ATTTGAGGTGGCGCGGACTCTAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | TCGCCGATCTCCGACTTCACCTTGCGGATGATCCGCTaGACAAATGCAGCGGGGGACAAGACAGCAAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPISDFTLRMIR*TNAAGDKTASG Trigger: GCCGCTTGCTGTCTTGTCCCCCGCTGCATTTGTGCAGCGGATCATCCGCAAGGTGAAGTCGGAGATCGGCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | TCCACGCGATGTGCACGTCTTGTAGGCGCTGCCCACTaGGGTCAAAGCTGGGACGCTGCAGTCTGTCGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: STRCARLVGAAH*GQSWDAAVCRL Trigger: TAGACGACAGACTGCAGCGTCCCAGCTTTGACCCCAGTGGGCAGCGCCTACAAGACGTGCACATCGCGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | GACTTGGCAGCTAGCTGCCGCTCCAGGTCAGCGATTTaGTTGGCTGAGACCTCCTCCAGCTCCTGCAGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DLAASCRSRSAI*LAETSSSSCRE Trigger: TTCCCTGCAGGAGCTGGAGGAGGTCTCAGCCAACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 90 bp | GCAGGCTTCTCCAGTAGGAACTTCTGTGTGGGGAAGAAGACATCCTaGGCCACAAGCAGCGGGTCGTCAGGCTTGGCCAGCGTCTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGFSSRNFCVGKKTS*ATSSGSSGLASVCG Trigger: CCCACAGACGCTGGCCAAGCCTGACGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCCCACACAGAAGTTCCTACTGGAGAAGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | CCTCTGCTCGCTGGTTGGCCTTCTCCAGGTTCGTCATaGTCAAGCCGACCTCATCGGCCTTGGAAGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLLAGWPSPGSS*SSRPHRPWKQP Trigger: AGGCTGCTTCCAAGGCCGATGAGGTCGGCTTGATCATGACGAACCTGGAGAAGGCCAACCAGCGAGCAGAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | ACCTCCTCCAGCTCCTGCAGGGAATGTCGAAGCTGCTaGGCGTCCTTCAACAGCCTCAGGATCTCTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSSSSCRECRSC*ASFNSLRISLS Trigger: GGACAGAGAGATCCTGAGGCTGTTGAAGGACGCCCAGCAGCTTCGACATTCCCTGCAGGAGCTGGAGGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | CCAGTAGGAACTTCTGTGTGGGGAAGAAGACATCCTTaGCCACAAGCAGCGGGTCGTCAGGCTTGGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PVGTSVWGRRHP*PQAAGRQAWPA Trigger: CGCTGGCCAAGCCTGACGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCCCACACAGAAGTTCCTACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | GGTCACTGTTTCCCAGAGGGTGGGTATGCTCCTCTTTaGGGCCATCTTGCCCTCGGTCTGGATCCCCCACAT | + |
|
Preference number: 6 (lower is better) Translates to: GHCFPEGGYAPL*GHLALGLDPPH Trigger: ATGTGGGGGATCCAGACCGAGGGCAAGATGGCCCCAAAGAGGAGCATACCCACCCTCTGGGAAACAGTGACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 72 bp | GTCTCCCCTTTGAAGGCAGCTGGGCCCATCATATGTTaGGATAGCAGTGAGTCCCCAGCCAGCCTCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VSPLKAAGPIIC*DSSESPASLSP Trigger: GGGGGAGAGGCTGGCTGGGGACTCACTGCTATCCAAACATATGATGGGCCCAGCTGCCTTCAAAGGGGAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 90 bp | GCCTGGGCCTCGAGCTTTTCTTGGAGTTTCTCTATGGCCTCGGACTaGGCAGCTAGCTGCCGCTCCAGGTCAGCGATTTGGTTGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: AWASSFSWSFSMASD*AASCRSRSAIWLAE Trigger: CTCAGCCAACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGAGAAACTCCAAGAAAAGCTCGAGGCCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 90 bp | CATCTCCAGCAGGGCCTGCTGCTGGGCTTGCATTTCTCGGCGGGCTaGTTCCAGAATGTTCTTGATGGCATCTTCCGAGGTGCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLQQGLLLGLHFSAG*FQNVLDGIFRGAGG Trigger: TCCTCCAGCACCTCGGAAGATGCCATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTGCTGGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | CCTCCAGGCTGCAGCAGGAGGATTCGGAGGTGGACTTaGAACTCAGAGGCTCTGAGTGAACCTGTTCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PPGCSRRIRRWT*NSEALSEPVPQ Trigger: CTGGGGAACAGGTTCACTCAGAGCCTCTGAGTTTCAAGTCCACCTCCGAATCCTCCTGCTGCAGCCTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | TGGAGTTTCTCTATGGCCTCGGACTTGGCAGCTAGCTaGCGCTCCAGGTCAGCGATTTGGTTGGCTGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: WSFSMASDLAAS*RSRSAIWLAET Trigger: GGTCTCAGCCAACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGAGAAACTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | GCAGATCTGACACGGAGCCCTGGGTCAACCCCAAGATaGTCTCACCAAACAGCCGCTGCCCTAGGTTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: ADLTRSPGSTPR*SHQTAAALGCC Trigger: ACAACAACCTAGGGCAGCGGCTGTTTGGTGAGAGCATCTTGGGGTTGACCCAGGGCTCCGTGTCAGATCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 72 bp | TCCAGTAGGAACTTCTGTGTGGGGAAGAAGACATCCTaGGCCACAAGCAGCGGGTCGTCAGGCTTGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSRNFCVGKKTS*ATSSGSSGLAS Trigger: GCTGGCCAAGCCTGACGACCCGCTGCTTGTGGCCAAGGATGTCTTCTTCCCCACACAGAAGTTCCTACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 90 bp | TTGGCCTTCTCCAGGTTCGTCATGATCAAGCCGACCTCATCGGCCTaGGAAGCAGCCTCCTCATCGTATTTCCTCCTCAGCTCCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LAFSRFVMIKPTSSA*EAASSSYFLLSSSS Trigger: GCTGCTGGAGCTGAGGAGGAAATACGATGAGGAGGCTGCTTCCAAGGCCGATGAGGTCGGCTTGATCATGACGAACCTGGAGAAGGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS GCA 72 bp | AGCGTGTCTACCTCCCGGTACATGTACAGTTCATACTaGTCGGGTGTCAGGGGCGGCACAGTGGGTTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SVSTSRYMYSSY*SGVRGGTVGLS Trigger: ACTCAAACCCACTGTGCCGCCCCTGACACCCGAGCAGTATGAACTGTACATGTACCGGGAGGTAGACACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 72 bp | CAGGGCCTGCTGCTGGGCTTGCATTTCTCGGCGGGCTaGTTCCAGAATGTTCTTGATGGCATCTTCCGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGLLLGLHFSAG*FQNVLDGIFRG Trigger: ACCTCGGAAGATGCCATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAGCCCAGCAGCAGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
||
| CDS CAA 90 bp | CACATAGTGGCCAAACACGCGCTGGCCAATGTTGTGCTTGAGAAGTaGCTCCTTCACCTGAAAGGCGATCTCAGCCGTGTCCAGCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: HIVAKHALANVVLEK*LLHLKGDLSRVQLL Trigger: GAGCAGCTGGACACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGTGTTTGGCCACTATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | TGGCCAATGTTGTGCTTGAGAAGTTGCTCCTTCACCTaGAAGGCGATCTCAGCCGTGTCCAGCTGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WPMLCLRSCSFT*KAISAVSSCSS Trigger: GGAGGAGCAGCTGGACACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | CTTGCATTTCTCGGCGGGCTTGTTCCAGAATGTTCTTaGTGGCATCTTCCGAGGTGCTGGAGGAGGCTGTGC | + |
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Preference number: 6 (lower is better) Translates to: LAFLGGLVPECS*WHLPRCWRRLC Trigger: GCACAGCCTCCTCCAGCACCTCGGAAGATGCCATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | TGCCTCACCTGGATGGTGCGCAGGGCCAGCACATTCTaGTCATCCGACAGGAACTGCTTCATCTTGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLTWMVRRASTF*SSDRNCFILMK Trigger: CTTCATCAAGATGAAGCAGTTCCTGTCGGATGAGCAGAATGTGCTGGCCCTGCGCACCATCCAGGTGAGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CCA 72 bp | CGAGCTTTTCTTGGAGTTTCTCTATGGCCTCGGACTTaGCAGCTAGCTGCCGCTCCAGGTCAGCGATTTGGT | + |
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Preference number: 6 (lower is better) Translates to: RAFLGVSLWPRT*QLAAAPGQRFG Trigger: ACCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGAGAAACTCCAAGAAAAGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 72 bp | TCGAGCTTTTCTTGGAGTTTCTCTATGGCCTCGGACTaGGCAGCTAGCTGCCGCTCCAGGTCAGCGATTTGG | + |
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Preference number: 6 (lower is better) Translates to: SSFSWSFSMASD*AASCRSRSAIW Trigger: CCAAATCGCTGACCTGGAGCGGCAGCTAGCTGCCAAGTCCGAGGCCATAGAGAAACTCCAAGAAAAGCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 72 bp | GCCAAACACGCGCTGGCCAATGTTGTGCTTGAGAAGTaGCTCCTTCACCTGAAAGGCGATCTCAGCCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: AKHALANVVLEK*LLHLKGDLSRV Trigger: GACACGGCTGAGATCGCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGTGTTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS CAA 72 bp | GCTTGCATTTCTCGGCGGGCTTGTTCCAGAATGTTCTaGATGGCATCTTCCGAGGTGCTGGAGGAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: ACISRRACSRMF*MASSEVLEEAV Trigger: CACAGCCTCCTCCAGCACCTCGGAAGATGCCATCAAGAACATTCTGGAACAAGCCCGCCGAGAAATGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS TCA 72 bp | CATAGTGGCCAAACACGCGCTGGCCAATGTTGTGCTTaGGAAGTTGCTCCTTCACCTGAAAGGCGATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: HSGQTRAGQCCA*EVAPSPERRSQ Trigger: CTGAGATCGCCTTTCAGGTGAAGGAGCAACTTCTCAAGCACAACATTGGCCAGCGCGTGTTTGGCCACTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000168288.9 |
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| CDS GCA 72 bp | AATCAATTGCTTATAAACACTCAGGAACGCCGCCTCTaGCTCCCGACTTCTTTTACTGAGAGCCACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: NQLLINTQERRL*LPTSFTESHHL Trigger: GAGGTGGTGGCTCTCAGTAAAAGAAGTCGGGAGGCAGAGGCGGCGTTCCTGAGTGTTTATAAGCAATTGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000086317.12 ENSMUST00000111752.10 ENSMUST00000134326.2 ENSMUST00000154139.8 ENSMUST00000168288.9 |
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