RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CUL9 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040327

Ensembl transcript IDs: ENSMUST00000066026.8, ENSMUST00000182485.8

Found 647 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCTGCTGGAGGCGCCTaGGGAGGGGCCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPAGGA*GGASRQ
Trigger: CTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCGCAGAGCCAGAGTaGAGGCTGCCCGCGGCCCGA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPCAEPE*RLPAAR
Trigger: TCGGGCCGCGGGCAGCCTTCACTCTGGCTCTGCGCA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTACGGGGCACAAAGTCTaGGGCCCTCCAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPTGHKV*GPPGCG
Trigger: GCCGCAGCCTGGAGGGCCTCAGACTTTGTGCCCCGT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCTGATCCAGGGAGCTaGGCGGACCAGGACCCCGCA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPADPGS*ADQDPA
Trigger: TGCGGGGTCCTGGTCCGCGCAGCTCCCTGGATCAGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGTCTGGTCCCCAAACTaGAGCTCAGCCCGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPVWSPN*SSARPS
Trigger: GCTGGGCCGGGCTGAGCTGCAGTTTGGGGACCAGAC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGGCCTCACGGCAGCTaGAGGGCTGCCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGPHGS*RAAFMA
Trigger: TGCCATGAAGGCAGCCCTCCAGCTGCCGTGAGGCCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAGGCCCAGCCGCACTTaGAGCAGGTGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPRPSRT*SRWSHC
Trigger: GCAGTGGGACCACCTGCTCCAAGTGCGGCTGGGCCT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGTCGTGCTGGCTCAGTaGCAGAAGGACGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPVVLAQ*QKDVSP
Trigger: CGGGCTCACGTCCTTCTGTCACTGAGCCAGCACGAC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCCCACGGCCATACTaGACTCCAGCTCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPCPRPY*TPAPAA
Trigger: CGCAGCAGGAGCTGGAGTTCAGTATGGCCGTGGGCA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGAGGCCAGCAGGAGCTaGGTGGAGTGCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPEASRS*VECLSR
Trigger: CCTGGACAAGCACTCCACTCAGCTCCTGCTGGCCTC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTGCATCGGGAGACGTaGTGTTCTGCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLHRET*CSAPGG
Trigger: GCCCCCTGGTGCAGAACATCACGTCTCCCGATGCAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTTCAGGGTACGCCTaGAGCCGAGGCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSSGYA*SRGPKG
Trigger: ACCCTTGGGGCCTCGGCTGCAGGCGTACCCTGAAGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCGCTGGCGGTCCTCTaGAATGTCCCGGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPALAVL*NVPAPC
Trigger: GCATGGAGCCGGGACATTGCAGAGGACCGCCAGCGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCCCTGCTCCAAGAGCTaGCTGTCGAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPPCSKS*LSSCCS
Trigger: GCTGCAGCAGCTCGACAGGCAGCTCTTGGAGCAGGG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAGCGTCTCCTGCACCTaGCGCACCGTCTGCTCCATC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSVSCT*RTVCSI
Trigger: GATGGAGCAGACGGTGCGGCAGGTGCAGGAGACGCT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGATGGTGCGTGTGGTaGGCATTGGCTCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGWCVW*ALALSP
Trigger: CGGGGACAGAGCCAATGCCCACCACACGCACCATCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCCGGCAGGGCCCCATaGGCTCTGGAGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPGRAP*ALEWHT
Trigger: TGTATGCCACTCCAGAGCCCATGGGGCCCTGCCGGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGCCACCACAGCTTCTaGGCTAGGCCTGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGHHSF*ARPGGL
Trigger: GAGACCTCCAGGCCTAGCCCAGAAGCTGTGGTGGCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCACGGGGCACAAAGTCTaGGGCCCTCCAGGCTGCGGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPTGHKV*GPPGCG
Trigger: GCCGCAGCCTGGAGGGCCTCAGACTTTGTGCCCCGT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGCCAGAAAGGACCATaGTGGGCTCTAGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGQKGP*WALGAA
Trigger: AGCGGCACCTAGAGCCCATCATGGTCCTTTCTGGCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCTTCAGGGTACGCCTaGAGCCGAGGCCCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSSGYA*SRGPKG
Trigger: ACCCTTGGGGCCTCGGCTGCAGGCGTACCCTGAAGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCCATGTGCTGCTCGATaGCGTCGTGCTGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPPCAAR*RRAGSV
Trigger: CACTGAGCCAGCACGACGGCATCGAGCAGCACATGG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCGTGCCCAGCCCATaGTCCGCACCAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSVPSP*SAPAQK
Trigger: TTTCTGAGCTGGTGCGGAGCATGGGCTGGGCACGGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTCACTGAGGTTCCGTaGCCAGCCCATGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPLTEVP*PAHAPH
Trigger: GTGCGGAGCATGGGCTGGGCACGGAACCTCAGTGAG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCGGAAGGCCCGCCCTTaGTTCCTGGGTGTAGTGACG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPRKARP*FLGVVT
Trigger: CGTCACTACACCCAGGAAGCAAGGGCGGGCCTTCCG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCTGATCCAGGGAGCTaGGCGGACCAGGACCCCGCA +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPADPGS*ADQDPA
Trigger: TGCGGGGTCCTGGTCCGCGCAGCTCCCTGGATCAGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCATCAGAGCCAGGCGGTaGAGGAAGCAGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPIRARR*RKQVTS
Trigger: GGAGGTGACCTGCTTCCTGCACCGCCTGGCTCTGAT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGAAGCAAAGGAAGCTaGAGGACCCTGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGSKGS*RTLAAP
Trigger: CGGAGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGAGGTGTGCAGGCTTTaGAGCATCAGCTGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPEVCRL*SISCGR
Trigger: CCTCCCGCAGCTGATGCTGCAAAGCCTGCACACCTC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAGCTGCCTGTCGAGCTaGTGCAGCTGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSCLSS*CSWKRW
Trigger: CCACCTCTTCCAGCTGCAGCAGCTCGACAGGCAGCT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCTTGGCCAAGTGCTTaGTCTGGGCCTCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPAWPSA*SGPPRS
Trigger: TGAGCGTGGAGGCCCAGAGCAAGCACTTGGCCAAGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGGCTGCCAGAGCCTaGAGCATCTTGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPWAARA*SILPAL
Trigger: GAGTGCAGGCAAGATGCTCCAGGCTCTGGCAGCCCA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGGCCCCATGGGCTCTaGAGTGGCATACATCAGGAC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGPHGL*SGIHQD
Trigger: GTCCTGATGTATGCCACTCCAGAGCCCATGGGGCCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCGAGTGGGGACCACCTaGGCCTGGGGTACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPRVGTT*AWGTRS
Trigger: GCTGCGAGTACCCCAGGCCCAGGTGGTCCCCACTCG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCACATGTGGCCACAGCTaGCAGGGTAGTGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPTCGHS*QGSVPR
Trigger: CCGAGGCACACTACCCTGCCAGCTGTGGCCACATGT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCCAAGTGCTTGCTCTaGGCCTCCACGCTCATGCCG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPAKCLL*ASTLMP
Trigger: CGGCATGAGCGTGGAGGCCCAGAGCAAGCACTTGGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGAGGCACCTCTTGGATaGCAGAGGCCTGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPEAPLG*QRPGSA
Trigger: TGCGGAACCAGGCCTCTGCCATCCAAGAGGTGCCTC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTGGTCCCCAGCTCCTaGCTCTGGGCTGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLVPSS*LWAVIQ
Trigger: CTGAATAACAGCCCAGAGTCAGGAGCTGGGGACCAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCACCGCTGCCACATGCTaGTCCAGGGAGCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPTAATC*SRELRG
Trigger: TCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGTGGTCTCGCTCAGTaGCCTCCTCCACAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGGLAQ*PPPQPG
Trigger: CCCAGGCTGTGGAGGAGGTCACTGAGCGAGACCACC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCCCATTCAGGCAGTTaGGGCAGGGCTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPAHSGS*GRAPRP
Trigger: AGGTCTTGGAGCCCTGCCTCAACTGCCTGAATGGGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTGGAGCATCTTGCCTaGACTCCGGCGGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPLEHLA*TPADLR
Trigger: CCTCAGATCCGCCGGAGTGCAGGCAAGATGCTCCAG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGAGCCTGGAGCATCTTaGCTGCACTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPEPGAS*LHSGGS
Trigger: AGATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGGGCACGCCATTGTTaGTCTGCTGGAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGARHC*SAGTRP
Trigger: AGGGCGAGTTCCAGCAGAGCAACAATGGCGTGCCCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGACTGCCAGAAGACCTaGACAGGGGGCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPDCQKT*TGGTPL
Trigger: CAATGGCGTGCCCCCTGTGCAGGTCTTCTGGCAGTC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGCAAGCTCCATCTCTaGCTCTGGGGGCACAGCATT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGKLHL*LWGHSI
Trigger: AATGCTGTGCCCCCAGAGGCAGAGATGGAGCTTGCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCAGGCTGGAGATCTaGACAGTGGCCAAGACCGCT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSRLEI*TVAKTA
Trigger: AGCGGTCTTGGCCACTGTGCAGATCTCCAGCCTGGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAACAGGAGGAATGGCTaGGTTTCCTGCTGGAGGCGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPNRRNG*VSCWRR
Trigger: GCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGCTCCAAGACCTCGTaGCAGGGGAGGACCATTGTC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGSKTS*QGRTIV
Trigger: GACAATGGTCCTCCCCTGGCACGAGGTCTTGGAGCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCCTGTCGAGCTGCTaGAGCTGGAAGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPCLSSC*SWKRWK
Trigger: CTTCCACCTCTTCCAGCTGCAGCAGCTCGACAGGCA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCCTCCTGGTCTCCCTaGTCCAAGAGCTGCCTGTCG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSSWSP*SKSCLS
Trigger: CGACAGGCAGCTCTTGGAGCAGGGAGACCAGGAGGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGACTTACAGCAGCAGTaGAGGCAGCAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPDLQQQ*RQQREG
Trigger: GCCCTCCCTCTGCTGCCTGCACTGCTGCTGTAAGTC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCCTGGCGGCACAGGATaGGGTCACAGCCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPPGGTG*GHSPEG
Trigger: ACCCTCAGGGCTGTGACCGCATCCTGTGCCGCCAGG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAAGTCCTGGGTGGAGTaGTGTAGGATGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPKSWVE*CRMASS
Trigger: GCTGCTGGCCATCCTACAGCACTCCACCCAGGACTT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTGGGCTGCCAGAGCCTaGAGCATCTTGCCTGCACTC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPWAARA*SILPAL
Trigger: GAGTGCAGGCAAGATGCTCCAGGCTCTGGCAGCCCA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCGGCTCCCAGCATCATaGGCTGCCAGAGCCTGGAGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPRLPAS*AARAWS
Trigger: GCTCCAGGCTCTGGCAGCCCATGATGCTGGGAGCCG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCCCTCCTCTGGCTCTaGGCTACAGGAGTGACGCCG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPALLWL*ATGVTP
Trigger: CGGCGTCACTCCTGTAGCCCAGAGCCAGAGGAGGGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTCCATCTCTGCCTCTaGGGGCACAGCATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLHLCL*GHSIGS
Trigger: AGAGCCAATGCTGTGCCCCCAGAGGCAGAGATGGAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTGACCCTGGGTGCTTaGTGTCTCCAGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLTLGA*CLQYCS
Trigger: CGAGCAGTACTGGAGACACCAAGCACCCAGGGTCAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCAGCTGGAAGAGGTaGAAGCGATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPCSWKR*KRCCSS
Trigger: GGAGCTGCAGCATCGCTTCCACCTCTTCCAGCTGCA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCGCCCAGGTGGATCTaGACCCTTCTGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPAPRWI*TLLPGL
Trigger: GAGGCCTGGCAGAAGGGTCCAGATCCACCTGGGCGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCACAGCCCTGAGGGTTaGTGCACCACGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPHSPEG*CTTSGW
Trigger: CCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGGCTGACAGCCACATaGGGAGATGCTCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGLTAT*GDALSS
Trigger: AGAAGACAGAGCATCTCCTCATGTGGCTGTCAGCCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGTCGTGCTGGCTCAGTaGCAGAAGGACGTGAGCCCG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPVVLAQ*QKDVSP
Trigger: CGGGCTCACGTCCTTCTGTCACTGAGCCAGCACGAC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGATCCAGCAGGGAGGTaGCACAGAGGTAGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPDPAGR*HRGSAL
Trigger: TAAAGCGCTACCTCTGTGTCACCTCCCTGCTGGATC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTGGTCCCCAGCTCCTaGCTCTGGGCTGTTATTCAG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPLVPSS*LWAVIQ
Trigger: CTGAATAACAGCCCAGAGTCAGGAGCTGGGGACCAG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTGGAGATACGGCAGTaGGTACAGGCCATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPLEIRQ*VQAMCG
Trigger: CCCACACATGGCCTGTACTCACTGCCGTATCTCCAG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTATCCCCGAGTGCCTaGACAAGGTGTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLSPSA*TRCLSA
Trigger: AGCTGAGAGACACCTTGTTCAGGCACTCGGGGATAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTCAGCCAGCACTGGGTaGGGTTCCGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSASTG*GSEGWC
Trigger: GCACCAGCCTTCGGAACCTCACCCAGTGCTGGCTGA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTATGCTGCAGCTCCTCTaGGGTGTGCAGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPMLQLL*GVQALQ
Trigger: CTGCAAAGCCTGCACACCTCAGAGGAGCTGCAGCAT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCCCAGCCATGTCCACTaGAGTCGCCGGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPPSHVH*SRRCGP
Trigger: AGGACCACACCGGCGACTTCAGTGGACATGGCTGGG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCTCCCTGTGGGCTTTaGGGATCCGGACAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSPCGL*GSGQEG
Trigger: GCCTTCTTGTCCGGATCCTCAAAGCCCACAGGGAGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCTCCCGGGTCTCTACTaGGGGACTCTGCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPLPGLY*GTLQPN
Trigger: GTTGGGCTGCAGAGTCCCTCAGTAGAGACCCGGGAG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTACGCCATTGTTGCTCTaGTGGAACTCGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPTPLLL*WNSPSS
Trigger: GGACGAGGGCGAGTTCCAGCAGAGCAACAATGGCGT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAGTGTACCCAGTAGGTaGGGCCAGTCGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSVPSR*GQSTAR
Trigger: TCTGGCAGTCGACTGGCCGCACCTACTGGGTACACT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCACAGCATTGGCTCTaGAGGCCTCTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPAQHWL*RPLPSL
Trigger: CAGAGAAGGAAGAGGCCTGCAGAGCCAATGCTGTGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGCAAGCTCCATCTCTaGCTCTGGGGGCACAGCATT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGKLHL*LWGHSI
Trigger: AATGCTGTGCCCCCAGAGGCAGAGATGGAGCTTGCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGCCATTTCAGTAGCTaGCTCCTGTGTTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGHFSS*LLCFRG
Trigger: CCCCCTGAAACACAGGAGGCAGCTACTGAAATGGCC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCATCCTGACCCTGGGTaGTTGGTGTCTCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPHPDPG*LVSPVL
Trigger: CAGTACTGGAGACACCAAGCACCCAGGGTCAGGATG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCCGTGAGGAAGGACTaGTGCAGCAGAGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPAVRKD*CSRAPE
Trigger: CTCCGGAGCTCTGCTGCAGCAGTCCTTCCTCACGGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAAGCAGGGACCGATCTaGTCCAGCACAGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPKQGPI*SSTAPS
Trigger: GGAGGGGGCTGTGCTGGAGCAGATCGGTCCCTGCTT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAGCTCCTCTGAGGTGTaGAGGCTTTGCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSSSEV*RLCSIS
Trigger: GCTGATGCTGCAAAGCCTGCACACCTCAGAGGAGCT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCATCATCCACCCACTaGGACATGTGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPSSTH*DMWPQL
Trigger: CAGCTGTGGCCACATGTCGCAGTGGGTGGATGATGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCCCGGCAGGCATCTTaGAGGAAGGTGAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPARQAS*RKVKDL
Trigger: CAAATCCTTCACCTTCCTGCAAGATGCCTGCCGGGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCTACTGAGGGACTCTaGAGCCCAACCCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSTEGL*SPTRKS
Trigger: GGACTTCCGGGTTGGGCTGCAGAGTCCCTCAGTAGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCGATGCCGTCGTGCTaGCTCAGTGACAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSMPSC*LSDRRT
Trigger: CGTCCTTCTGTCACTGAGCCAGCACGACGGCATCGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGGTTCGTATCCAGGCTaGAGATCTGCACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPGSYPG*RSAQWP
Trigger: TGGCCACTGTGCAGATCTCCAGCCTGGATACGAACC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCCAGAATGTGGGCTTaGGGCCCAGCACCTCCACAC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPARMWA*GPAPPH
Trigger: GTGTGGAGGTGCTGGGCCCCAAGCCCACATTCTGGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAGAGAACATCAGTGCTaGAGCAGGCCACACCCACTG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPREHQC*SRPHPL
Trigger: CAGTGGGTGTGGCCTGCTCCAGCACTGATGTTCTCT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCCTCCTGGGGACTCATaGTACGGCCTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPPPGDS*YGLQAA
Trigger: AGCTGCCTGCAGGCCGTACCATGAGTCCCCAGGAGG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTGCTGGAGGCGCCTaGGGAGGGGCCTCACGGCAG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPAGGA*GGASRQ
Trigger: CTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTTGGCTTCCAGGACTTaGGGCAGCGCCAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPLASRT*GSASRT
Trigger: GGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGAGCCTGGAGCATCTTaGCTGCACTCCGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPEPGAS*LHSGGS
Trigger: AGATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCAAAATCCATGTGCTaGTCGATGCCGTCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSKSMC*SMPSCW
Trigger: CCAGCACGACGGCATCGAGCAGCACATGGATTTTGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTGTCAAAATCCATGTaGTGCTCGATGCCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLSKSM*CSMPSC
Trigger: GCACGACGGCATCGAGCAGCACATGGATTTTGACAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTCCGTGCCCAGCCCATaGTCCGCACCAGCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSVPSP*SAPAQK
Trigger: TTTCTGAGCTGGTGCGGAGCATGGGCTGGGCACGGA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCACAGCATTGGCTCTaGAGGCCTCTTCCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPAQHWL*RPLPSL
Trigger: CAGAGAAGGAAGAGGCCTGCAGAGCCAATGCTGTGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGCCAGCATCTTGAGTaGTGCCAGTCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGQHLE*CQSCLL
Trigger: CAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCATCCTGACCCTGGGTaGTTGGTGTCTCCAGTACTG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPHPDPG*LVSPVL
Trigger: CAGTACTGGAGACACCAAGCACCCAGGGTCAGGATG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCACCAGCAGGGTCAGCTaGCTAATAAGAACACCACGG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPTSRVS*LIRTPR
Trigger: CCGTGGTGTTCTTATTAGGCAGCTGACCCTGCTGGT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCCGGCTCCATGCTTGTaGCCGAATTGTGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPPAPCL*PNCVEE
Trigger: CTCTTCTACACAATTCGGGCACAAGCATGGAGCCGG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCTGCTGACCTGTCCCTaGACCACACTCAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPLLTCP*TTLSQH
Trigger: GTGCTGGCTGAGTGTGGTGCAGGGACAGGTCAGCAG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGAGGTGTGCAGGCTTTaGAGCATCAGCTGCGGGAGG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPEVCRL*SISCGR
Trigger: CCTCCCGCAGCTGATGCTGCAAAGCCTGCACACCTC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAGCTCCTCTGAGGTGTaGAGGCTTTGCAGCATCAGC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSSSEV*RLCSIS
Trigger: GCTGATGCTGCAAAGCCTGCACACCTCAGAGGAGCT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAAGTTCAGCGTCTCCTaGACCTGCCGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPKFSVS*TCRTVC
Trigger: GCAGACGGTGCGGCAGGTGCAGGAGACGCTGAACTT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGACTTACAGCAGCAGTaGAGGCAGCAGAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPDLQQQ*RQQREG
Trigger: GCCCTCCCTCTGCTGCCTGCACTGCTGCTGTAAGTC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCCCGGCAGGCATCTTaGAGGAAGGTGAAGGATTTG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPARQAS*RKVKDL
Trigger: CAAATCCTTCACCTTCCTGCAAGATGCCTGCCGGGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTCCGCCAGCTGCCTaGCAGCCCTGCGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPPPAA*QPCAPA
Trigger: CGCTGGTGCGCAGGGCTGCCAGGCAGCTGGCGGAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCCTCCTCGTTCTTCTaGGGTTCGGGCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSSSFF*GSGWRY
Trigger: GTATCTCCAGCCCGAACCCCAGAAGAACGAGGAGGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCTCAGCCATCTCTATaGGCACAGAGAGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPQPSL*AQRALP
Trigger: TGGGAGAGCTCTCTGTGCCCATAGAGATGGCTGAGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTGGAGATCTGCACAGTaGCCAAGACCGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPWRSAQ*PRPLPH
Trigger: ATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCAGCAGGAGCTGAGTaGAGTGCTTGTCCAGGACTT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPAGAE*SACPGL
Trigger: AAGTCCTGGACAAGCACTCCACTCAGCTCCTGCTGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAGCTGTAGGAGGCGCTaGCGGTCCTCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSCRRR*RSSAMS
Trigger: GGACATTGCAGAGGACCGCCAGCGCCTCCTACAGCT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAGGCCTTTCTCCCTGTaGGCTTTGAGGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPRPFSL*ALRIRT
Trigger: TGTCCGGATCCTCAAAGCCCACAGGGAGAAAGGCCT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGTGCTGAGCTACATCTaGCTCCAAGTTCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPVLSYI*LQVQRL
Trigger: GAGACGCTGAACTTGGAGCCAGATGTAGCTCAGCAC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCGCCAGCAGAACCCATaGTTACATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPRQQNP*LHLAQV
Trigger: GACCTGTGCAAGATGTAACCATGGGTTCTGCTGGCG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGTAGTCCTTGTGGCTTaGCTTCCAGGACTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPVVLVA*LPGLEA
Trigger: TGCCTCAAGTCCTGGAAGCCAAGCCACAAGGACTAC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGCTCTTCTCCTTTGTaGGACACGGGGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGSSPL*DTGSSG
Trigger: ACCAGAGCTCCCCGTGTCTCACAAAGGAGAAGAGCC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCATAGAAGCAGGTTaGGAAGAAGCAGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPCIEAG*EEAGRF
Trigger: GAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCAGCTCCTGCGTTATaGTCTGGTCTCCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSAPAL*SGLPKC
Trigger: ACACTTTGGGAGACCAGATCATAACGCAGGAGCTGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAACTGTTCGCTTATGTaGGCAGCCGTGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPNCSLM*AAVRKD
Trigger: GTCCTTCCTCACGGCTGCTCACATAAGCGAACAGTT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGCTCTGTGCCCGTGCTaGGGCAGTCGGCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPALCPC*GSRPAG
Trigger: TCCTGCGGGCCGACTGCCTCAGCACGGGCACAGAGC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCACGCCATTGTTGCTCTaGTGGAACTCGCCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPTPLLL*WNSPSS
Trigger: GGACGAGGGCGAGTTCCAGCAGAGCAACAATGGCGT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAGTGGCCAAGACCGCTaGCACATGCTGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSGQDR*HMLIQG
Trigger: TCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAAGAGAGAACATCAGTaGTGGAGCAGGCCACACCCA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPKREHQ*WSRPHP
Trigger: TGGGTGTGGCCTGCTCCAGCACTGATGTTCTCTCTT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCATGAGCTTGGCCAAGTaGTTGCTCTGGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPMSLAK*LLWAST
Trigger: CGTGGAGGCCCAGAGCAAGCACTTGGCCAAGCTCAT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAAGTCCTGGGTGGAGTaGTGTAGGATGGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPKSWVE*CRMASS
Trigger: GCTGCTGGCCATCCTACAGCACTCCACCCAGGACTT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAGTACAGGCCATGTGTaGGCTTCCAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSTGHV*ASSPRR
Trigger: CCTCCTGGGACTGGAAGCCCACACATGGCCTGTACT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCTCTCCCACCTGGTTaGTTAGCAAATCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSLPPG*LANPPG
Trigger: CCCTGGTGGATTTGCTAACCAACCAGGTGGGAGAGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAAGCAGGTCACCTCCTaGACAACCTCAGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPKQVTS*TTSESL
Trigger: CAGTGACTCTGAGGTTGTCCAGGAGGTGACCTGCTT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCAGCTGGAAGAGGTaGAAGCGATGCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPCSWKR*KRCCSS
Trigger: GGAGCTGCAGCATCGCTTCCACCTCTTCCAGCTGCA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCAGGACGGAAATGGCTaGTCCTGGGTCTGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPQDGNG*SWVCKE
Trigger: CTCTTTACAGACCCAGGACCAGCCATTTCCGTCCTG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCTGTAGGTGCTTTCTaGGGTGGTGCAGATAGCACA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPVGAF*GGADST
Trigger: TGTGCTATCTGCACCACCCCAGAAAGCACCTACAGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTACACTGAGATACGTCTaGGGAGGTATCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPTLRYV*GGISHR
Trigger: CCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCATACATCAGGACCTaGGGCCTGTCATCACGCCGT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPAYIRT*GLSSRR
Trigger: ACGGCGTGATGACAGGCCCCAGGTCCTGATGTATGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGGCTGTTATTCAGCTaGTCCAGCAGGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGLLFS*SSREVT
Trigger: TGTCACCTCCCTGCTGGATCAGCTGAATAACAGCCC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGTAGATGCGGGAATTaGGCAGGTCGCAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPCRCGN*AGRRGC
Trigger: GCAACCTCTGCGACCTGCTCAATTCCCGCATCTACA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCAGTCACCAGAAGCTaGTTAAACAGCTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSVTRS*LNSWES
Trigger: TGACTCCCAGCTGTTTAATCAGCTTCTGGTGACTGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCAGCTCCTGCGTTATaGTCTGGTCTCCCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSAPAL*SGLPKC
Trigger: ACACTTTGGGAGACCAGATCATAACGCAGGAGCTGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTCTGAGGAAGGTGGATaGCCTCCAAGGCCATGCAGT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSEEGG*PPRPCS
Trigger: ACTGCATGGCCTTGGAGGGCATCCACCTTCCTCAGA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGTATCAAACAGAGGTTaGATGGAATCTCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPVSNRG*MESRLG
Trigger: CCCCAGCCGAGATTCCATCCAACCTCTGTTTGATAC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGTAAGGTGATGGAGTaGGAGCCAGTGCTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPCKVME*EPVLPL
Trigger: CAACGGCAGCACTGGCTCCCACTCCATCACCTTACA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCAAACACCACCACCCTaGCTGGCATGTAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPQTPPP*LACNLN
Trigger: ATTCAAGTTACATGCCAGCCAGGGTGGTGGTGTTTG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCGATACCACCCTGCTaGCAGCGCTTTATTCGGATT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSIPPC*QRFIRI
Trigger: AATCCGAATAAAGCGCTGCCAGCAGGGTGGTATCGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGCACTCCGGCGGATCTaGGGCTCGGGATTGCACAGC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPALRRI*GSGLHS
Trigger: GCTGTGCAATCCCGAGCCTCAGATCCGCCGGAGTGC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCACCATTGTCTCAGGATaGTCCAGCAGTCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPTIVSG*SSSRVM
Trigger: CATGACCCGACTGCTGGATCATCCTGAGACAATGGT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCATCTTGCAGGAAGGTaGAGGATTTGGGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPHLAGR*RIWVEA
Trigger: TGCCTCCACCCAAATCCTTCACCTTCCTGCAAGATG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGGCGGCAAAGCGCCCTaGTCACTGAGGTTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPGGKAP*SLRFRA
Trigger: GGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCGGCAGCTGGAGGGCTaGCTTCATGGCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPRQLEG*LHGTAR
Trigger: GCGTGCTGTGCCATGAAGGCAGCCCTCCAGCTGCCG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTCAGTGTTCTTGTTaGCACAAAAGGGGACATCTG +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSQCSC*HKRGHL
Trigger: CAGATGTCCCCTTTTGTGGCAACAAGAACACTGAGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTGGCGGCACAGGATaGGGTCACAGCCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPGGTG*GHSPEG
Trigger: ACCCTCAGGGCTGTGACCGCATCCTGTGCCGCCAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCCTTCTCTGAGAAGTTaGCAGCTGACCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPPSLRS*QLTLSP
Trigger: AGGGCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTCTCTCCCACCTGGTTaGTTAGCAAATCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSLPPG*LANPPG
Trigger: CCCTGGTGGATTTGCTAACCAACCAGGTGGGAGAGA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTATCTTCTCTCCCACCTaGTTGGTTAGCAAATCCACC +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPIFSPT*LVSKST
Trigger: GGTGGATTTGCTAACCAACCAGGTGGGAGAGAAGAT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGAAATGGCTGGTCCTaGGTCTGTAAAGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGNGWS*VCKEFS
Trigger: AGAGAACTCTTTACAGACCCAGGACCAGCCATTTCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCACACTGAGATACGTCTaGGGAGGTATCAGCCACAGG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPTLRYV*GGISHR
Trigger: CCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGTGCTGAGCTACATCTaGCTCCAAGTTCAGCGTCTC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPVLSYI*LQVQRL
Trigger: GAGACGCTGAACTTGGAGCCAGATGTAGCTCAGCAC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGGACCACCTGGGCCTaGGGTACTCGCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGTTWA*GTRSPA
Trigger: GGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTCCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCCCACGGCCATACTaGACTCCAGCTCCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPCPRPY*TPAPAA
Trigger: CGCAGCAGGAGCTGGAGTTCAGTATGGCCGTGGGCA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTGGTTCCGCAGGTTaGCAGCAAACTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPGSAG*QQTPGP
Trigger: AGGCCCGGGAGTTTGCTGTCAACCTGCGGAACCAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACCCTCCGCCAGCTaGCTGGCAGCCCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLPPSAS*LAALRT
Trigger: GGTGCGCAGGGCTGCCAGGCAGCTGGCGGAGGGTGG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGATTGCACAGCATGTaGATGAGCAGATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGLHSM*MSRSRA
Trigger: AGCCCTAGATCTGCTCATGCACATGCTGTGCAATCC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCGGAAGGCCCGCCCTTaGTTCCTGGGTGTAGTGACG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPRKARP*FLGVVT
Trigger: CGTCACTACACCCAGGAAGCAAGGGCGGGCCTTCCG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAAGCAGGGACCGATCTaGTCCAGCACAGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPKQGPI*SSTAPS
Trigger: GGAGGGGGCTGTGCTGGAGCAGATCGGTCCCTGCTT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGGATGGTGCGTGTGGTaGGCATTGGCTCTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPGWCVW*ALALSP
Trigger: CGGGGACAGAGCCAATGCCCACCACACGCACCATCC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTGCTTTGCTTACCATaGCAGAGCAGTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPLLCLP*QSSCSS
Trigger: ACTACTACAACTGCTCTGCCATGGTAAGCAAAGCAG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCTGCCTGGCAGCCCTaGGCACCAGCGCCCGGACAT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAAWQP*APAPGH
Trigger: ATGTCCGGGCGCTGGTGCGCAGGGCTGCCAGGCAGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCACCCTCCGCCAGCTaGCTGGCAGCCCTGCGCACC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPPSAS*LAALRT
Trigger: GGTGCGCAGGGCTGCCAGGCAGCTGGCGGAGGGTGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGCGGCAAAGCGCCCTaGTCACTGAGGTTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGGKAP*SLRFRA
Trigger: GGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGACTGCCAGAAGACCTaGACAGGGGGCACGCCATTG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPDCQKT*TGGTPL
Trigger: CAATGGCGTGCCCCCTGTGCAGGTCTTCTGGCAGTC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTTGTATTCTTGCATaGAAATCAGCACAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSCILA*KSAQRR
Trigger: TCTACGCTGTGCTGATTTGCATGCAAGAATACAAGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGCTGCCAGTCCTGCCTaGTGCACCAAGACGGATGTC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPAASPA*CTKTDV
Trigger: GACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCATTTGTTGGTCAATGTaGCTAGCAAACTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPICWSM*LANCSL
Trigger: AAGCGAACAGTTTGCTAGGCACATTGACCAACAAAT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAGCTGCCTGTCGAGCTaGTGCAGCTGGAAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSCLSS*CSWKRW
Trigger: CCACCTCTTCCAGCTGCAGCAGCTCGACAGGCAGCT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAAGTTCAGCGTCTCCTaGACCTGCCGCACCGTCTGC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPKFSVS*TCRTVC
Trigger: GCAGACGGTGCGGCAGGTGCAGGAGACGCTGAACTT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAGACACGGGGAGCTCTaGTCCCCAGCTCCTGACTCT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPRHGEL*SPAPDS
Trigger: AGAGTCAGGAGCTGGGGACCAGAGCTCCCCGTGTCT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACGGAGCCTGGGCGGGTaGCAGAGTCGATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPRSLGG*QSRCWQ
Trigger: TTGCCAGCATCGACTCTGCCACCCGCCCAGGCTCCG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGGCCTCACGGCAGCTaGAGGGCTGCCTTCATGGCA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGPHGS*RAAFMA
Trigger: TGCCATGAAGGCAGCCCTCCAGCTGCCGTGAGGCCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTTCACCTCCACACTaGAGCCCTGGCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPSPPH*SPGRDA
Trigger: GGCATCTCTGCCAGGGCTCCAGTGTGGAGGTGAAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGAGGGGCTGCGAGGATaGCTCAGGAGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPEGLRG*LRRRPR
Trigger: CCTGGGCCTTCTCCTGAGCCATCCTCGCAGCCCCTC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCCCAAGCAAACCACCGTaGATTTGTTGGTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPPSKPP*ICWSMC
Trigger: GCACATTGACCAACAAATCCACGGTGGTTTGCTTGG...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGGGCCCCATGGGCTCTaGAGTGGCATACATCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPGPHGL*SGIHQD
Trigger: GTCCTGATGTATGCCACTCCAGAGCCCATGGGGCCC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCACAGCCCTGAGGGTTaGTGCACCACGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPHSPEG*CTTSGW
Trigger: CCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAGGCCCAGCCGCACTTaGAGCAGGTGGTCCCACTGC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPRPSRT*SRWSHC
Trigger: GCAGTGGGACCACCTGCTCCAAGTGCGGCTGGGCCT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGTAGACCTCTGGGGCTaGCAGCCACATGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPVDLWG*QPHEEM
Trigger: CATCTCCTCATGTGGCTGTCAGCCCCAGAGGTCTAC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTCGTCCCCAGCACTaGTCTCCTCGTAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPRPQH*SPRSHP
Trigger: TGGATGACTACGAGGAGATCAGTGCTGGGGACGAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCTGGAGATACGGCAGTaGGTACAGGCCATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPLEIRQ*VQAMCG
Trigger: CCCACACATGGCCTGTACTCACTGCCGTATCTCCAG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATCAGCCAGCACTGGGTaGGGTTCCGAAGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSASTG*GSEGWC
Trigger: GCACCAGCCTTCGGAACCTCACCCAGTGCTGGCTGA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACGGCCAGGAATCTGCTaGCCTGTCCCTGCACCACAC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPRPGIC*PVPAPH
Trigger: GTGTGGTGCAGGGACAGGTCAGCAGATTCCTGGCCG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAATGCGGTCACAGCCCTaGGGGTTGGTGCACCACGTC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPMRSQP*GLVHHV
Trigger: GACGTGGTGCACCAACCCTCAGGGCTGTGACCGCAT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCTCTGTGCCCGTGCTaGGGCAGTCGGCCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSALCPC*GSRPAG
Trigger: TCCTGCGGGCCGACTGCCTCAGCACGGGCACAGAGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCCAAGGCCATGCAGTaGTCCTCTGTGGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSKAMQ*SSVDVV
Trigger: GACCACGTCCACAGAGGAGCACTGCATGGCCTTGGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCAGCATCTTGAGTGCTaGCAGTCCTGCCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPQHLEC*QSCLLH
Trigger: GTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGGTGTCTCCAGTACTaGTCGCTCAGGACTTCCCCG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPWCLQY*SLRTSP
Trigger: CGGGGAAGTCCTGAGCGAGCAGTACTGGAGACACCA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCATAAGAACACCACGGTaGATGTGTAAGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPIRTPR*MCKVME
Trigger: CTCCATCACCTTACACATGCACCGTGGTGTTCTTAT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGCCGTGAGGAAGGACTaGTGCAGCAGAGCTCCGGAG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPAVRKD*CSRAPE
Trigger: CTCCGGAGCTCTGCTGCAGCAGTCCTTCCTCACGGC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACCCTGCTCCAAGAGCTaGCTGTCGAGCTGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPPCSKS*LSSCCS
Trigger: GCTGCAGCAGCTCGACAGGCAGCTCTTGGAGCAGGG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCAGGGCGTTCGTATaGAGCTCCAGGTTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPCRAFV*SSRFSV
Trigger: GACGGAGAACCTGGAGCTGCATACGAACGCCCTGCA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCGATGCCGTCGTGCTaGCTCAGTGACAGAAGGACG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSMPSC*LSDRRT
Trigger: CGTCCTTCTGTCACTGAGCCAGCACGACGGCATCGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTTCTCATGCAGATTCTaGAAAATTGGCTGCTGTTCA +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPFSCRF*KIGCCS
Trigger: TGAACAGCAGCCAATTTTCCAGAATCTGCATGAGAA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAGCCAGTGCTGCCGTTaGACTCCCAGTAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSQCCR*TPSRSW
Trigger: CCAAGACCTACTGGGAGTCCAACGGCAGCACTGGCT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCAAAATTCTGTTCATaGCGCAAAACTCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPAKFCS*RKTLFS
Trigger: ACTGAACAGAGTTTTGCGCCATGAACAGAATTTTGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCACACTCAGCCAGCACTaGGTGAGGTTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPTLSQH*VRFRRL
Trigger: CAGCCTTCGGAACCTCACCCAGTGCTGGCTGAGTGT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCGAGCTGCTGCAGCTaGAAGAGGTGGAAGCGATGC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSSCCS*KRWKRC
Trigger: GCATCGCTTCCACCTCTTCCAGCTGCAGCAGCTCGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGTGCAGATAGCACAGTaGGGAGACCGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPVQIAQ*GDRPAA
Trigger: CGCTGCTGGCCGGTCTCCCCACTGTGCTATCTGCAC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGGACCACCTGGGCCTaGGGTACTCGCAGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGTTWA*GTRSPA
Trigger: GGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTCCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGGATGGCAGAGGCCTaGTTCCGCAGGTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPWMAEA*FRRLTA
Trigger: TGCTGTCAACCTGCGGAACCAGGCCTCTGCCATCCA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCACTCCGGCGGATCTaGGGCTCGGGATTGCACAGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLALRRI*GSGLHS
Trigger: GCTGTGCAATCCCGAGCCTCAGATCCGCCGGAGTGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGCCAGAAAGGACCATaGTGGGCTCTAGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGQKGP*WALGAA
Trigger: AGCGGCACCTAGAGCCCATCATGGTCCTTTCTGGCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACTCTTCTTCCAGCCCTaGGGAGCCCTGGGGTTGATC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPLFFQP*GALGLI
Trigger: GATCAACCCCAGGGCTCCTCAGGGCTGGAAGAAGAG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000066026.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATTCCACTTCCAGCCCTaGGGAGCCCTGGGGTTGATC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPFHFQP*GALGLI
Trigger: GATCAACCCCAGGGCTCCTCAGGGCTGGAAGTGGAA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACTGGAGCATCTTGCCTaGACTCCGGCGGATCTGAGG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPLEHLA*TPADLR
Trigger: CCTCAGATCCGCCGGAGTGCAGGCAAGATGCTCCAG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGGGCACGCCATTGTTaGTCTGCTGGAACTCGCCCT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGARHC*SAGTRP
Trigger: AGGGCGAGTTCCAGCAGAGCAACAATGGCGTGCCCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACAGTACAGCTGCCCCTaGTCCCTTCTCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPQYSCP*SLLHSC
Trigger: GCAGCTGTGGAGAAGGGAGCAGGGGCAGCTGTACTG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCAGCACAGCGTAGATaGCACCCTCCCTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSAQRR*HPPWQR
Trigger: TCTTTGCCAGGGAGGGTGGCATCTACGCTGTGCTGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGCCAGCATCTTGAGTaGTGCCAGTCCTGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGQHLE*CQSCLL
Trigger: CAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCGGCAGCTGGAGGGCTaGCTTCATGGCACAGCACGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLRQLEG*LHGTAR
Trigger: GCGTGCTGTGCCATGAAGGCAGCCCTCCAGCTGCCG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTTCTTGCTGAGGGGCTaGGAGGATGGCTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPFLLRG*EDGSGE
Trigger: TTCTCCTGAGCCATCCTCGCAGCCCCTCAGCAAGAA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGCTTGGCCAAGTGCTTaGTCTGGGCCTCCACGCTCA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPAWPSA*SGPPRS
Trigger: TGAGCGTGGAGGCCCAGAGCAAGCACTTGGCCAAGC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCCTCCTCGTTCTTCTaGGGTTCGGGCTGGAGATAC +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSSSFF*GSGWRY
Trigger: GTATCTCCAGCCCGAACCCCAGAAGAACGAGGAGGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCTCAGCCATCTCTATaGGCACAGAGAGCTCTCCCA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPQPSL*AQRALP
Trigger: TGGGAGAGCTCTCTGTGCCCATAGAGATGGCTGAGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCCCTCCTCTGGCTCTaGGCTACAGGAGTGACGCCG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLALLWL*ATGVTP
Trigger: CGGCGTCACTCCTGTAGCCCAGAGCCAGAGGAGGGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGGACGGACCAGGGGGTaGTCTCGCTCAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLGRTRG*SRSVTS
Trigger: GGAGGTCACTGAGCGAGACCACCCCCTGGTCCGTCC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCGGAGCCTGGGCGGGTaGCAGAGTCGATGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLRSLGG*QSRCWQ
Trigger: TTGCCAGCATCGACTCTGCCACCCGCCCAGGCTCCG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCACAGGCGCCGAACTTaGGAAGCAAAGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPHRRRT*EAKEAA
Trigger: TGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCTGCGGGAGGCGGTTaGGGAAGCAGGGACCGATCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAAGGG*GSRDRS
Trigger: AGATCGGTCCCTGCTTCCCCAACCGCCTCCCGCAGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGCCACATCTGTACAGTaGACACGTGCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPATSVQ*TRAGSG
Trigger: ACCAGACCCTGCACGTGTCCACTGTACAGATGTGGC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCGCCCAGGTGGATCTaGACCCTTCTGCCAGGCCTC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAPRWI*TLLPGL
Trigger: GAGGCCTGGCAGAAGGGTCCAGATCCACCTGGGCGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGAGTGGGGACCACCTaGGCCTGGGGTACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRVGTT*AWGTRS
Trigger: GCTGCGAGTACCCCAGGCCCAGGTGGTCCCCACTCG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCAGAGGCGGAGGGCCTaGGAGGCATGGCTGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLQRRRA*EAWLED
Trigger: ATCTTCCAGCCATGCCTCTCAGGCCCTCCGCCTCTG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTACCGCTGCCACATGCTaGTCCAGGGAGCTGCGCGGA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSTAATC*SRELRG
Trigger: TCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGTGGTCTCGCTCAGTaGCCTCCTCCACAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGGLAQ*PPPQPG
Trigger: CCCAGGCTGTGGAGGAGGTCACTGAGCGAGACCACC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCATTCATGCTTGGTCATaGGCAGGTAGAGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPIHAWS*AGRGGA
Trigger: TGCGCCTCCTCTACCTGCTCATGACCAAGCATGAAT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACAATGGCCAGCATCTTaGGTGCTGCCAGTCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPQWPAS*VLPVLP
Trigger: AGGCAGGACTGGCAGCACTCAAGATGCTGGCCATTG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGAGGCCAGCAGGAGCTaGGTGGAGTGCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLEASRS*VECLSR
Trigger: CCTGGACAAGCACTCCACTCAGCTCCTGCTGGCCTC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGGCTGGCATGTAACTTaGATCTTCACTGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPGWHVT*IFTGHQ
Trigger: CTGGTGGCCAGTGAAGATTCAAGTTACATGCCAGCC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCATGCGGTCACAGCCCTaGGGGTTGGTGCACCACGTC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLMRSQP*GLVHHV
Trigger: GACGTGGTGCACCAACCCTCAGGGCTGTGACCGCAT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTCCCGGGTCTCTACTaGGGGACTCTGCAGCCCAAC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLPGLY*GTLQPN
Trigger: GTTGGGCTGCAGAGTCCCTCAGTAGAGACCCGGGAG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAACTCCAGCTCCTGCTaGGCCCGGCTCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPNSSSC*ARLFSF
Trigger: AAAGGAGAAGAGCCGGGCGCAGCAGGAGCTGGAGTT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAGTGTACCCAGTAGGTaGGGCCAGTCGACTGCCAGA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSVPSR*GQSTAR
Trigger: TCTGGCAGTCGACTGGCCGCACCTACTGGGTACACT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACAGGCCGTTTCTCACTaGAGAGGAGCACCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPQAVSH*RGAPLS
Trigger: ACTGAGGGGTGCTCCTCTGCAGTGAGAAACGGCCTG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCGCTGGCGGTCCTCTaGAATGTCCCGGCTCCATGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSALAVL*NVPAPC
Trigger: GCATGGAGCCGGGACATTGCAGAGGACCGCCAGCGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGGAAGCAAAGGAAGCTaGAGGACCCTGGCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLGSKGS*RTLAAP
Trigger: CGGAGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGCAGGGCGTTCGTATaGAGCTCCAGGTTCTCCGTC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPCRAFV*SSRFSV
Trigger: GACGGAGAACCTGGAGCTGCATACGAACGCCCTGCA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATCTACTGAGGGACTCTaGAGCCCAACCCGGAAGTCC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSTEGL*SPTRKS
Trigger: GGACTTCCGGGTTGGGCTGCAGAGTCCCTCAGTAGA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGCTCTGTCTTTGCACTaGCAAGCTCCATCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPALSLH*QAPSLP
Trigger: AGGCAGAGATGGAGCTTGCCAGTGCAAAGACAGAGC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGACGGACCAGGGGGTaGTCTCGCTCAGTGACCTCC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGRTRG*SRSVTS
Trigger: GGAGGTCACTGAGCGAGACCACCCCCTGGTCCGTCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCTCAGAGTCACTGCTTaGCCCATTCAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPLRVTA*PIQAVE
Trigger: CTCAACTGCCTGAATGGGCCAAGCAGTGACTCTGAG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAAGCAGGTCACCTCCTaGACAACCTCAGAGTCACTG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPKQVTS*TTSESL
Trigger: CAGTGACTCTGAGGTTGTCCAGGAGGTGACCTGCTT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGAGGGGCTGCGAGGATaGCTCAGGAGAAGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSEGLRG*LRRRPR
Trigger: CCTGGGCCTTCTCCTGAGCCATCCTCGCAGCCCCTC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCTGCGGGAGGCGGTTaGGGAAGCAGGGACCGATCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSAAGGG*GSRDRS
Trigger: AGATCGGTCCCTGCTTCCCCAACCGCCTCCCGCAGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCAGGACGGAAATGGCTaGTCCTGGGTCTGTAAAGAG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPQDGNG*SWVCKE
Trigger: CTCTTTACAGACCCAGGACCAGCCATTTCCGTCCTG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCGGCAGGGCCCCATaGGCTCTGGAGTGGCATACA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPGRAP*ALEWHT
Trigger: TGTATGCCACTCCAGAGCCCATGGGGCCCTGCCGGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGGCCACCACAGCTTCTaGGCTAGGCCTGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLGHHSF*ARPGGL
Trigger: GAGACCTCCAGGCCTAGCCCAGAAGCTGTGGTGGCC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCTCCTGGGGACTCATaGTACGGCCTGCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLPPGDS*YGLQAA
Trigger: AGCTGCCTGCAGGCCGTACCATGAGTCCCCAGGAGG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAAGGAGCAGTGGTTCTaGGTCATCGCTGTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPKEQWF*VIAVAL
Trigger: CAGAGCTACAGCGATGACCCAGAACCACTGCTCCTT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCCAGCAGCCTCTCCTaGATCCTCCGGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLASSLS*ILRSSS
Trigger: AGAGCTGCTCCGGAGGATCCAGGAGAGGCTGCTGGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGGCTGACAGCCACATaGGGAGATGCTCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGLTAT*GDALSS
Trigger: AGAAGACAGAGCATCTCCTCATGTGGCTGTCAGCCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGGCTGTTATTCAGCTaGTCCAGCAGGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGLLFS*SSREVT
Trigger: TGTCACCTCCCTGCTGGATCAGCTGAATAACAGCCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCCCATTCAGGCAGTTaGGGCAGGGCTCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAHSGS*GRAPRP
Trigger: AGGTCTTGGAGCCCTGCCTCAACTGCCTGAATGGGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTGCATCGGGAGACGTaGTGTTCTGCACCAGGGGGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSLHRET*CSAPGG
Trigger: GCCCCCTGGTGCAGAACATCACGTCTCCCGATGCAG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGGCCAGGAATCTGCTaGCCTGTCCCTGCACCACAC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRPGIC*PVPAPH
Trigger: GTGTGGTGCAGGGACAGGTCAGCAGATTCCTGGCCG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATTATGTGAGCAGCCGTaGGGAAGGACTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPLCEQP*GRTAAA
Trigger: TGCTGCAGCAGTCCTTCCTCACGGCTGCTCACATAA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGCCATGTCCACTaGAGTCGCCGGTGTGGTCCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPSHVH*SRRCGP
Trigger: AGGACCACACCGGCGACTTCAGTGGACATGGCTGGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCGGGAAAACTACAGCTaGAGCAAGAGGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLRENYS*SKRPSR
Trigger: GCGGCTGGGCCTCTTGCTTCAGCTGTAGTTTTCCCG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTGGTTCCGCAGGTTaGCAGCAAACTCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPGSAG*QQTPGP
Trigger: AGGCCCGGGAGTTTGCTGTCAACCTGCGGAACCAGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAGCCACATGAGGAGATaGTCTGTCTTCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSHMRR*SVFSSS
Trigger: AGAGGAGGAGAAGACAGAGCATCTCCTCATGTGGCT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGGATTGCACAGCATGTaGATGAGCAGATCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPGLHSM*MSRSRA
Trigger: AGCCCTAGATCTGCTCATGCACATGCTGTGCAATCC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCACTGAGGTTCCGTaGCCAGCCCATGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSLTEVP*PAHAPH
Trigger: GTGCGGAGCATGGGCTGGGCACGGAACCTCAGTGAG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCATCAGAGCCAGGCGGTaGAGGAAGCAGGTCACCTCC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLIRARR*RKQVTS
Trigger: GGAGGTGACCTGCTTCCTGCACCGCCTGGCTCTGAT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAATGTCCCGGCTCCATaGTTGTGCCCGAATTGTGTA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPNVPAP*LCPNCV
Trigger: TACACAATTCGGGCACAAGCATGGAGCCGGGACATT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTGCTGACCTGTCCCTaGACCACACTCAGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLLTCP*TTLSQH
Trigger: GTGCTGGCTGAGTGTGGTGCAGGGACAGGTCAGCAG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGCCCTGAGGGTTGGTaGACCACGTCAGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSPEGW*TTSGWS
Trigger: GCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGGAGATCTGCACAGTaGCCAAGACCGCTGCCACAT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPWRSAQ*PRPLPH
Trigger: ATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGTATCAAACAGAGGTTaGATGGAATCTCGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPVSNRG*MESRLG
Trigger: CCCCAGCCGAGATTCCATCCAACCTCTGTTTGATAC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCTTCACCTCCACACTaGAGCCCTGGCAGAGATGCC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLPSPPH*SPGRDA
Trigger: GGCATCTCTGCCAGGGCTCCAGTGTGGAGGTGAAGG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGTAAGGTGATGGAGTaGGAGCCAGTGCTGCCGTTG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPCKVME*EPVLPL
Trigger: CAACGGCAGCACTGGCTCCCACTCCATCACCTTACA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCGATACCACCCTGCTaGCAGCGCTTTATTCGGATT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSIPPC*QRFIRI
Trigger: AATCCGAATAAAGCGCTGCCAGCAGGGTGGTATCGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGTGCAGATAGCACAGTaGGGAGACCGGCCAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSVQIAQ*GDRPAA
Trigger: CGCTGCTGGCCGGTCTCCCCACTGTGCTATCTGCAC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCCAAGTGCTTGCTCTaGGCCTCCACGCTCATGCCG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSAKCLL*ASTLMP
Trigger: CGGCATGAGCGTGGAGGCCCAGAGCAAGCACTTGGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGAGGCACCTCTTGGATaGCAGAGGCCTGGTTCCGCA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLEAPLG*QRPGSA
Trigger: TGCGGAACCAGGCCTCTGCCATCCAAGAGGTGCCTC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCCAGCAGCCTCTCCTaGATCCTCCGGAGCAGCTCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSASSLS*ILRSSS
Trigger: AGAGCTGCTCCGGAGGATCCAGGAGAGGCTGCTGGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGGCTCTTCTCCTTTGTaGGACACGGGGAGCTCTGGT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLGSSPL*DTGSSG
Trigger: ACCAGAGCTCCCCGTGTCTCACAAAGGAGAAGAGCC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCATGCTGCAGCTCCTCTaGGGTGTGCAGGCTTTGCAG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLMLQLL*GVQALQ
Trigger: CTGCAAAGCCTGCACACCTCAGAGGAGCTGCAGCAT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCTCCCTGTGGGCTTTaGGGATCCGGACAAGAAGGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSPCGL*GSGQEG
Trigger: GCCTTCTTGTCCGGATCCTCAAAGCCCACAGGGAGA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAACCAGACAAACCAGCTaGTCGATGTGCAGGCCTTTC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPTRQTS*SMCRPF
Trigger: GAAAGGCCTGCACATCGATCAGCTGGTTTGTCTGGT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGGGAAAACTACAGCTaGAGCAAGAGGCCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRENYS*SKRPSR
Trigger: GCGGCTGGGCCTCTTGCTTCAGCTGTAGTTTTCCCG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTTGGCTTCCAGGACTTaGGGCAGCGCCAGCAGAACC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSLASRT*GSASRT
Trigger: GGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCATGTGCTGCTCGATaGCGTCGTGCTGGCTCAGTG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPCAAR*RRAGSV
Trigger: CACTGAGCCAGCACGACGGCATCGAGCAGCACATGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACTGTCAAAATCCATGTaGTGCTCGATGCCGTCGTGC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPLSKSM*CSMPSC
Trigger: GCACGACGGCATCGAGCAGCACATGGATTTTGACAG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAACTCCAGCTCCTGCTaGGCCCGGCTCTTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLNSSSC*ARLFSF
Trigger: AAAGGAGAAGAGCCGGGCGCAGCAGGAGCTGGAGTT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGTACAGCTGCCCCTaGTCCCTTCTCCACAGCTGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSQYSCP*SLLHSC
Trigger: GCAGCTGTGGAGAAGGGAGCAGGGGCAGCTGTACTG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGTGGCCAAGACCGCTaGCACATGCTGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSGQDR*HMLIQG
Trigger: TCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCTGCCAGTCCTGCCTaGTGCACCAAGACGGATGTC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSAASPA*CTKTDV
Trigger: GACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGTGTCTCTCAGCTCCTaGGTTATGATCTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPVSLSS*VMIWSP
Trigger: GGGAGACCAGATCATAACGCAGGAGCTGAGAGACAC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGCTCCAAGACCTCGTaGCAGGGGAGGACCATTGTC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGSKTS*QGRTIV
Trigger: GACAATGGTCCTCCCCTGGCACGAGGTCTTGGAGCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGGTGGAAGCGATGCTaGAGCTCCTCTGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLRWKRC*SSSEVC
Trigger: GCACACCTCAGAGGAGCTGCAGCATCGCTTCCACCT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTGCCTGTCGAGCTGCTaGAGCTGGAAGAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLCLSSC*SWKRWK
Trigger: CTTCCACCTCTTCCAGCTGCAGCAGCTCGACAGGCA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAAGAGAGAACATCAGTaGTGGAGCAGGCCACACCCA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPKREHQ*WSRPHP
Trigger: TGGGTGTGGCCTGCTCCAGCACTGATGTTCTCTCTT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGCCCTGAGGGTTGGTaGACCACGTCAGGTTGGAGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSSPEGW*TTSGWS
Trigger: GCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATCATCCACCCACTaGGACATGTGGCCACAGCTG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLPSSTH*DMWPQL
Trigger: CAGCTGTGGCCACATGTCGCAGTGGGTGGATGATGG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCCATGGTTACATCTTaGACAGGTCATGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPMVTS*TGHVQT
Trigger: TGTCTGCACATGACCTGTGCAAGATGTAACCATGGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCTCCCTCAGTAGCATaGGGCAGTTGGCGTAGACCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAPSVA*GSWRRP
Trigger: AGGTCTACGCCAACTGCCCCATGCTACTGAGGGAGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTCCATCTCTGCCTCTaGGGGCACAGCATTGGCTCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLHLCL*GHSIGS
Trigger: AGAGCCAATGCTGTGCCCCCAGAGGCAGAGATGGAG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTGACCCTGGGTGCTTaGTGTCTCCAGTACTGCTCG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLTLGA*CLQYCS
Trigger: CGAGCAGTACTGGAGACACCAAGCACCCAGGGTCAG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGCTTGTCCAGGACTTTaGAGAGGGCTTCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPACPGL*RGLPYL
Trigger: GAGGTAAGGAAGCCCTCTCCAAAGTCCTGGACAAGC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCAAACACCACCACCCTaGCTGGCATGTAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPQTPPP*LACNLN
Trigger: ATTCAAGTTACATGCCAGCCAGGGTGGTGGTGTTTG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGCTGTAGGAGGCGCTaGCGGTCCTCTGCAATGTCC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSSCRRR*RSSAMS
Trigger: GGACATTGCAGAGGACCGCCAGCGCCTCCTACAGCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGGAAATGGCTGGTCCTaGGTCTGTAAAGAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPGNGWS*VCKEFS
Trigger: AGAGAACTCTTTACAGACCCAGGACCAGCCATTTCC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCATACATCAGGACCTaGGGCCTGTCATCACGCCGT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAYIRT*GLSSRR
Trigger: ACGGCGTGATGACAGGCCCCAGGTCCTGATGTATGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTACATGTGGCCACAGCTaGCAGGGTAGTGTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSTCGHS*QGSVPR
Trigger: CCGAGGCACACTACCCTGCCAGCTGTGGCCACATGT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGTAGACCTCTGGGGCTaGCAGCCACATGAGGAGATG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSVDLWG*QPHEEM
Trigger: CATCTCCTCATGTGGCTGTCAGCCCCAGAGGTCTAC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTGCTGGCATAGGCACTaGGCACGTGGACGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSCWHRH*ARGRCE
Trigger: TTCACACCGTCCACGTGCTCAGTGCCTATGCCAGCA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGATCCAGCAGGGAGGTaGCACAGAGGTAGCGCTTTA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLDPAGR*HRGSAL
Trigger: TAAAGCGCTACCTCTGTGTCACCTCCCTGCTGGATC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTCGTCCCCAGCACTaGTCTCCTCGTAGTCATCCA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPRPQH*SPRSHP
Trigger: TGGATGACTACGAGGAGATCAGTGCTGGGGACGAGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGCATAGAAGCAGGTTaGGAAGAAGCAGGCCGTTTC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPCIEAG*EEAGRF
Trigger: GAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTATCCCCGAGTGCCTaGACAAGGTGTCTCTCAGCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLSPSA*TRCLSA
Trigger: AGCTGAGAGACACCTTGTTCAGGCACTCGGGGATAG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTTATGTGAGCAGCCGTaGGGAAGGACTGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLCEQP*GRTAAA
Trigger: TGCTGCAGCAGTCCTTCCTCACGGCTGCTCACATAA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAGCCACATGAGGAGATaGTCTGTCTTCTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSHMRR*SVFSSS
Trigger: AGAGGAGGAGAAGACAGAGCATCTCCTCATGTGGCT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTCCAAGGCCATGCAGTaGTCCTCTGTGGACGTGGTC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSSKAMQ*SSVDVV
Trigger: GACCACGTCCACAGAGGAGCACTGCATGGCCTTGGA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCAGCACAGCGTAGATaGCACCCTCCCTGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSAQRR*HPPWQR
Trigger: TCTTTGCCAGGGAGGGTGGCATCTACGCTGTGCTGA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGCATCTTGAGTGCTaGCAGTCCTGCCTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSQHLEC*QSCLLH
Trigger: GTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGGCCGTTTCTCACTaGAGAGGAGCACCCCTCAGT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSQAVSH*RGAPLS
Trigger: ACTGAGGGGTGCTCCTCTGCAGTGAGAAACGGCCTG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTGGTGTCTCCAGTACTaGTCGCTCAGGACTTCCCCG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSWCLQY*SLRTSP
Trigger: CGGGGAAGTCCTGAGCGAGCAGTACTGGAGACACCA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAATGTCCCGGCTCCATaGTTGTGCCCGAATTGTGTA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPNVPAP*LCPNCV
Trigger: TACACAATTCGGGCACAAGCATGGAGCCGGGACATT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTTCTTGCTGAGGGGCTaGGAGGATGGCTCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLFLLRG*EDGSGE
Trigger: TTCTCCTGAGCCATCCTCGCAGCCCCTCAGCAAGAA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGGTGGAAGCGATGCTaGAGCTCCTCTGAGGTGTGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRWKRC*SSSEVC
Trigger: GCACACCTCAGAGGAGCTGCAGCATCGCTTCCACCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACCAGGAGATGCAGGATaGAAGAGAGAACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPPGDAG*KREHQC
Trigger: GCACTGATGTTCTCTCTTGCATCCTGCATCTCCTGG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGGCCTCCACGCTCATaGCGTCATAGTAGCCACCAT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGPPRS*RHSSHH
Trigger: ATGGTGGCTACTATGACGGCATGAGCGTGGAGGCCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTATGAGCTTGGCCAAGTaGTTGCTCTGGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSMSLAK*LLWAST
Trigger: CGTGGAGGCCCAGAGCAAGCACTTGGCCAAGCTCAT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATCCAGGTTCTCCGTCTaGTGTTCTACCACATCCATG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSRFSV*CSTTSM
Trigger: CATGGATGTGGTAGAACAGCAGACGGAGAACCTGGA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGTACAGGCCATGTGTaGGCTTCCAGTCCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSSTGHV*ASSPRR
Trigger: CCTCCTGGGACTGGAAGCCCACACATGGCCTGTACT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGATGCCACCCTCCCTaGCAAAGAGCGGACGCCATT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRCHPP*QRADAI
Trigger: AATGGCGTCCGCTCTTTGCCAGGGAGGGTGGCATCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGGCAGAGTCGATGCTaGCAAAGATCTCTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPWQSRC*QRSLWS
Trigger: TGACCAGAGAGATCTTTGCCAGCATCGACTCTGCCA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCACAGGCGCCGAACTTaGGAAGCAAAGGAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLHRRRT*EAKEAA
Trigger: TGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTACACTCAGCCAGCACTaGGTGAGGTTCCGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSTLSQH*VRFRRL
Trigger: CAGCCTTCGGAACCTCACCCAGTGCTGGCTGAGTGT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCCACATCTGTACAGTaGACACGTGCAGGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLATSVQ*TRAGSG
Trigger: ACCAGACCCTGCACGTGTCCACTGTACAGATGTGGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTGCCGCAAGGAGCAGTaGTTCTGGGTCATCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLCRKEQ*FWVIAV
Trigger: TACAGCGATGACCCAGAACCACTGCTCCTTGCGGCA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTGGATGGCAGAGGCCTaGTTCCGCAGGTTGACAGCA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSWMAEA*FRRLTA
Trigger: TGCTGTCAACCTGCGGAACCAGGCCTCTGCCATCCA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTGTAGATGCGGGAATTaGGCAGGTCGCAGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSCRCGN*AGRRGC
Trigger: GCAACCTCTGCGACCTGCTCAATTCCCGCATCTACA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATCAGTCACCAGAAGCTaGTTAAACAGCTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSVTRS*LNSWES
Trigger: TGACTCCCAGCTGTTTAATCAGCTTCTGGTGACTGA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGTGGGGCTTCCATCCTaGCCCTTACTGTTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSVGLPS*PLLFLL
Trigger: CAGCAAGAACAGTAAGGGTCAGGATGGAAGCCCCAC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAACTGTTCGCTTATGTaGGCAGCCGTGAGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLNCSLM*AAVRKD
Trigger: GTCCTTCCTCACGGCTGCTCACATAAGCGAACAGTT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCAAAATCCATGTGCTaGTCGATGCCGTCGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSKSMC*SMPSCW
Trigger: CCAGCACGACGGCATCGAGCAGCACATGGATTTTGA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGCCATTTCAGTAGCTaGCTCCTGTGTTTCAGGGGG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGHFSS*LLCFRG
Trigger: CCCCCTGAAACACAGGAGGCAGCTACTGAAATGGCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGGTGGCAGAGTCGATaGTGGCAAAGATCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGWQSR*WQRSLW
Trigger: CCAGAGAGATCTTTGCCAGCATCGACTCTGCCACCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGTGTCTCTCAGCTCCTaGGTTATGATCTGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLVSLSS*VMIWSP
Trigger: GGGAGACCAGATCATAACGCAGGAGCTGAGAGACAC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAGGTTGCTGCAGAGCTaGGAGTACTTCTCACACTCG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLRLLQS*EYFSHS
Trigger: CGAGTGTGAGAAGTACTCGCAGCTCTGCAGCAACCT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCACCAGCAGGGTCAGCTaGCTAATAAGAACACCACGG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLTSRVS*LIRTPR
Trigger: CCGTGGTGTTCTTATTAGGCAGCTGACCCTGCTGGT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGTTCGTATCCAGGCTaGAGATCTGCACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGSYPG*RSAQWP
Trigger: TGGCCACTGTGCAGATCTCCAGCCTGGATACGAACC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGGCAAAGATCTCTCTaGTCATCTGGGTATCAAACA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPWQRSL*SSGYQT
Trigger: TGTTTGATACCCAGATGACCAGAGAGATCTTTGCCA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACCACCGTGGATTTGTTaGTCAATGTGCCTAGCAAAC +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPPPWIC*SMCLAN
Trigger: GTTTGCTAGGCACATTGACCAACAAATCCACGGTGG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGGCCTTTCTCCCTGTaGGCTTTGAGGATCCGGACA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRPFSL*ALRIRT
Trigger: TGTCCGGATCCTCAAAGCCCACAGGGAGAAAGGCCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGAGAACATCAGTGCTaGAGCAGGCCACACCCACTG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSREHQC*SRPHPL
Trigger: CAGTGGGTGTGGCCTGCTCCAGCACTGATGTTCTCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAATCCTTCTACCTCCTaGGGACTCATGGTACGGCCT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLNPSTS*GLMVRP
Trigger: AGGCCGTACCATGAGTCCCCAGGAGGTAGAAGGATT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCAAGGAGCAGTGGTTCTaGGTCATCGCTGTAGCTCTG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLKEQWF*VIAVAL
Trigger: CAGAGCTACAGCGATGACCCAGAACCACTGCTCCTT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTGCCGCAAGGAGCAGTaGTTCTGGGTCATCGCTGTA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSCRKEQ*FWVIAV
Trigger: TACAGCGATGACCCAGAACCACTGCTCCTTGCGGCA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGTAGTCCTTGTGGCTTaGCTTCCAGGACTTGAGGCA +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLVVLVA*LPGLEA
Trigger: TGCCTCAAGTCCTGGAAGCCAAGCCACAAGGACTAC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTATTCATGCTTGGTCATaGGCAGGTAGAGGAGGCGCA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSIHAWS*AGRGGA
Trigger: TGCGCCTCCTCTACCTGCTCATGACCAAGCATGAAT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTACCATTGTCTCAGGATaGTCCAGCAGTCGGGTCATG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSTIVSG*SSSRVM
Trigger: CATGACCCGACTGCTGGATCATCCTGAGACAATGGT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR TCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCATCTTGCAGGAAGGTaGAGGATTTGGGTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSHLAGR*RIWVEA
Trigger: TGCCTCCACCCAAATCCTTCACCTTCCTGCAAGATG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCTTGTATTCTTGCATaGAAATCAGCACAGCGTAGA +
Preference number: 4 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSCILA*KSAQRR
Trigger: TCTACGCTGTGCTGATTTGCATGCAAGAATACAAGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAATAAGAACACCACGGTaGATGTGTAAGGTGATGGAG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPIRTPR*MCKVME
Trigger: CTCCATCACCTTACACATGCACCGTGGTGTTCTTAT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCGGCTCCATGCTTGTaGCCGAATTGTGTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPAPCL*PNCVEE
Trigger: CTCTTCTACACAATTCGGGCACAAGCATGGAGCCGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGAGATGCAGGATaGAAGAGAGAACATCAGTGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLPGDAG*KREHQC
Trigger: GCACTGATGTTCTCTCTTGCATCCTGCATCTCCTGG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATCTCAGTGTTCTTGTTaGCACAAAAGGGGACATCTG +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSQCSC*HKRGHL
Trigger: CAGATGTCCCCTTTTGTGGCAACAAGAACACTGAGA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCCAGGTTCTCCGTCTaGTGTTCTACCACATCCATG +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSRFSV*CSTTSM
Trigger: CATGGATGTGGTAGAACAGCAGACGGAGAACCTGGA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTTCTCTGAGAAGTTaGCAGCTGACCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPSLRS*QLTLSP
Trigger: AGGGCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCTCTGTCTTTGCACTaGCAAGCTCCATCTCTGCCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSALSLH*QAPSLP
Trigger: AGGCAGAGATGGAGCTTGCCAGTGCAAAGACAGAGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCAGAGTCACTGCTTaGCCCATTCAGGCAGTTGAG +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSLRVTA*PIQAVE
Trigger: CTCAACTGCCTGAATGGGCCAAGCAGTGACTCTGAG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCTTGTCCAGGACTTTaGAGAGGGCTTCCTTACCTC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSACPGL*RGLPYL
Trigger: GAGGTAAGGAAGCCCTCTCCAAAGTCCTGGACAAGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTGTAGGTGCTTTCTaGGGTGGTGCAGATAGCACA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPVGAF*GGADST
Trigger: TGTGCTATCTGCACCACCCCAGAAAGCACCTACAGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAATCCTTCTACCTCCTaGGGACTCATGGTACGGCCT +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSNPSTS*GLMVRP
Trigger: AGGCCGTACCATGAGTCCCCAGGAGGTAGAAGGATT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCCAGCAGAACCCATaGTTACATCTTGCACAGGTC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSRQQNP*LHLAQV
Trigger: GACCTGTGCAAGATGTAACCATGGGTTCTGCTGGCG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTTCTGGAAAATTGGCTaGTGTTCACCCACGTCCAAC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLFWKIG*CSPTSN
Trigger: GTTGGACGTGGGTGAACAGCAGCCAATTTTCCAGAA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCAGATTCTGGAAAATTaGCTGCTGTTCACCCACGTC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLQILEN*LLFTHV
Trigger: GACGTGGGTGAACAGCAGCCAATTTTCCAGAATCTG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTTCTGGAAAATTGGCTaGTGTTCACCCACGTCCAAC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSFWKIG*CSPTSN
Trigger: GTTGGACGTGGGTGAACAGCAGCCAATTTTCCAGAA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGGTTACATCTTaGACAGGTCATGTGCAGACA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPMVTS*TGHVQT
Trigger: TGTCTGCACATGACCTGTGCAAGATGTAACCATGGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTATCTTCTCTCCCACCTaGTTGGTTAGCAAATCCACC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSIFSPT*LVSKST
Trigger: GGTGGATTTGCTAACCAACCAGGTGGGAGAGAAGAT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGCAAAATTCTGTTCATaGCGCAAAACTCTGTTCAGT +
Preference number: 4 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPAKFCS*RKTLFS
Trigger: ACTGAACAGAGTTTTGCGCCATGAACAGAATTTTGC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCAAGCAAACCACCGTaGATTTGTTGGTCAATGTGC +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSPSKPP*ICWSMC
Trigger: GCACATTGACCAACAAATCCACGGTGGTTTGCTTGG...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCTGCTTTGCTTACCATaGCAGAGCAGTTGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLLLCLP*QSSCSS
Trigger: ACTACTACAACTGCTCTGCCATGGTAAGCAAAGCAG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCTCATCCAGTTTCTCATaGAGATTCTGGAAAATTGGC +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLSSSFS*RFWKIG
Trigger: GCCAATTTTCCAGAATCTGCATGAGAAACTGGATGA...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR GCA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCATTTGTTGGTCAATGTaGCTAGCAAACTGTTCGCTT +
Preference number: 4 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLICWSM*LANCSL
Trigger: AAGCGAACAGTTTGCTAGGCACATTGACCAACAAAT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CCA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTTGGCAAAGATCTCTCTaGTCATCTGGGTATCAAACA +
Preference number: 4 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSWQRSL*SSGYQT
Trigger: TGTTTGATACCCAGATGACCAGAGAGATCTTTGCCA...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GCACAGCAGCCGTCAGGCTCGAGGTCCCACCCTCCGCCAGCTGCCTaGCAGCCCTGCGCACCAGCGCCCGGACATCAGCCTCCATCTCTG +
Preference number: 5 (lower is better)
Translates to: AQQPSGSRSHPPPAA*QPCAPAPGHQPPSL
Trigger: CAGAGATGGAGGCTGATGTCCGGGCGCTGGTGCGCAGGGCTGCCAGGCAGCTGGCGGAGGGTGGGACCTCGAGCCTGACGGCTGCTGTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GTCGTGGCCAGCTCTAGGCCAGAAAGGACCATGATGGGCTCTAGGTaGCGCTGGAGCCGCCCCAGCATCCCCACTCCAGCCGCTCCGCCA +
Preference number: 5 (lower is better)
Translates to: VVASSRPERTMMGSR*RWSRPSIPTPAAPP
Trigger: TGGCGGAGCGGCTGGAGTGGGGATGCTGGGGCGGCTCCAGCGGCACCTAGAGCCCATCATGGTCCTTTCTGGCCTAGAGCTGGCCACGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGAGGCCCAGCCGCACTaGGAGCAGGTGGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPEAQPH*EQVVPL
Trigger: CAGTGGGACCACCTGCTCCAAGTGCGGCTGGGCCTC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp TCCAGGCTGGAGATCTGCACAGTGGCCAAGACCGCTGCCACATGCTaGTCCAGGGAGCTGCGCGGACCAGGACCCCGCAAGGCTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SRLEICTVAKTAATC*SRELRGPGPRKALA
Trigger: GGCCAGAGCCTTGCGGGGTCCTGGTCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCAGCCTGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GGGGCATCTAGAGTCCGCAGCAACAGGAGGAATGGCTGCGTTTCCTaGTGGAGGCGCCTGAGGAGGGGCCTCACGGCAGCTGGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: GASRVRSNRRNGCVS*WRRLRRGLTAAGGL
Trigger: CAGCCCTCCAGCTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTTGCTGCGGACTCTAGATGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp TTGGGCCCGGGGGCATCTAGAGTCCGCAGCAACAGGAGGAATGGCTaGGTTTCCTGCTGGAGGCGCCTGAGGAGGGGCCTCACGGCAGCT +
Preference number: 5 (lower is better)
Translates to: LGPGASRVRSNRRNG*VSCWRRLRRGLTAA
Trigger: AGCTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTTGCTGCGGACTCTAGATGCCCCCGGGCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp ACGCACACAGGGCATTGGTCAGGGCGAGTGGGGACCACCTGGGCCTaGGGTACTCGCAGCCCTGCCGCAAGGAGCAGTGGTTCTGGGTCA +
Preference number: 5 (lower is better)
Translates to: THTGHWSGRVGTTWA*GTRSPAARSSGSGS
Trigger: TGACCCAGAACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTCCCCACTCGCCCTGACCAATGCCCTGTGTGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCCTGGTTCCGCAGGTaGACAGCAAACTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPAWFRR*TANSRA
Trigger: GGCCCGGGAGTTTGCTGTCAACCTGCGGAACCAGGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp TCCGCAGCAACAGGAGGAATGGCTGCGTTTCCTGCTGGAGGCGCCTaGGGAGGGGCCTCACGGCAGCTGGAGGGCTGCCTTCATGGCACA +
Preference number: 5 (lower is better)
Translates to: SAATGGMAAFPAGGA*GGASRQLEGCLHGT
Trigger: TGTGCCATGAAGGCAGCCCTCCAGCTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTTGCTGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CATGGCTGGAAGATGGATCGGGATGGCCTGGGCGGCAAAGCGCCCTaGTCACTGAGGTTCCGTGCCCAGCCCATGCTCCGCACCAGCTCA +
Preference number: 5 (lower is better)
Translates to: HGWKMDRDGLGGKAP*SLRFRAQPMLRTSS
Trigger: TGAGCTGGTGCGGAGCATGGGCTGGGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCCCAGGCCATCCCGATCCATCTTCCAGCCATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GCATCTAGAGTCCGCAGCAACAGGAGGAATGGCTGCGTTTCCTGCTaGAGGCGCCTGAGGAGGGGCCTCACGGCAGCTGGAGGGCTGCCT +
Preference number: 5 (lower is better)
Translates to: ASRVRSNRRNGCVSC*RRLRRGLTAAGGLP
Trigger: AGGCAGCCCTCCAGCTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTTGCTGCGGACTCTAGATGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp AGAAGCGCTCCAGGGCATCGCAGAGCTCCGCCTGTAGGTGCTTTCTaGGGTGGTGCAGATAGCACAGTGGGGAGACCGGCCAGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: RSAPGHRRAPPVGAF*GGADSTVGRPASSA
Trigger: CGCGCTGCTGGCCGGTCTCCCCACTGTGCTATCTGCACCACCCCAGAAAGCACCTACAGGCGGAGCTCTGCGATGCCCTGGAGCGCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CTGGGCCTGGGGTACTCGCAGCCCTGCCGCAAGGAGCAGTGGTTCTaGGTCATCGCTGTAGCTCTGCAGCAGCTGCTCTGTGCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: LGLGYSQPCRKEQWF*VIAVALQQLLCAPV
Trigger: CACTGGGGCACAGAGCAGCTGCTGCAGAGCTACAGCGATGACCCAGAACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GACCACCTGGGCCTGGGGTACTCGCAGCCCTGCCGCAAGGAGCAGTaGTTCTGGGTCATCGCTGTAGCTCTGCAGCAGCTGCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: DHLGLGYSQPCRKEQ*FWVIAVALQQLLCA
Trigger: GGCACAGAGCAGCTGCTGCAGAGCTACAGCGATGACCCAGAACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGCCAGAATGTGGGCTaGGGGCCCAGCACCTCCACA +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGQNVG*GPSTST
Trigger: TGTGGAGGTGCTGGGCCCCAAGCCCACATTCTGGCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GAGCCCGGCTCCCAGCATCATGGGCTGCCAGAGCCTGGAGCATCTTaGCTGCACTCCGGCGGATCTGAGGCTCGGGATTGCACAGCATGT +
Preference number: 5 (lower is better)
Translates to: EPGSQHHGLPEPGAS*LHSGGSEARDCTAC
Trigger: ACATGCTGTGCAATCCCGAGCCTCAGATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTCTGGCAGCCCATGATGCTGGGAGCCGGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp TCGGGATGGCCTGGGCGGCAAAGCGCCCTGCTCACTGAGGTTCCGTaGCCAGCCCATGCTCCGCACCAGCTCAGAAATGAGATTGCCCAC +
Preference number: 5 (lower is better)
Translates to: SGWPGRQSALLTEVP*PAHAPHQLRNEIAH
Trigger: GTGGGCAATCTCATTTCTGAGCTGGTGCGGAGCATGGGCTGGGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCCCAGGCCATCCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp AGAGAACATCAGTGCTGGAGCAGGCCACACCCACTGCCGCAGCGTTaGCTAGGCGCCCAGGTGGATCTGGACCCTTCTGCCAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: REHQCWSRPHPLPQR*LGAQVDLDPSARPP
Trigger: TGGAGGCCTGGCAGAAGGGTCCAGATCCACCTGGGCGCCTAGGCAACGCTGCGGCAGTGGGTGTGGCCTGCTCCAGCACTGATGTTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CTGCGTTTCCTGCTGGAGGCGCCTGAGGAGGGGCCTCACGGCAGCTaGAGGGCTGCCTTCATGGCACAGCACGCGTTCCAAGTCAAGGAA +
Preference number: 5 (lower is better)
Translates to: LRFLLEAPEEGPHGS*RAAFMAQHAFQVKE
Trigger: TTCCTTGACTTGGAACGCGTGCTGTGCCATGAAGGCAGCCCTCCAGCTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TGCCCAGGCCCTGGCGGCACAGGATGCGGTCACAGCCCTGAGGGTTaGTGCACCACGTCAGGTTGGAGCAGCTTTCCACATAGCCTCGCA +
Preference number: 5 (lower is better)
Translates to: CPGPGGTGCGHSPEG*CTTSGWSSFPHSLA
Trigger: TGCGAGGCTATGTGGAAAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACCGCATCCTGTGCCGCCAGGGCCTGGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCACAGGCGCCGAACTaGGGAAGCAAAGGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPAQAPN*GSKGSC
Trigger: GCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAGCTGCGGGAGGCGGTaGGGGAAGCAGGGACCGATC +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSCGRR*GKQGPI
Trigger: GATCGGTCCCTGCTTCCCCAACCGCCTCCCGCAGCT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTAGCTTGGCCAAGTGCTaGCTCTGGGCCTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSLAKC*LWASTL
Trigger: GAGCGTGGAGGCCCAGAGCAAGCACTTGGCCAAGCT...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp AGGTCACCCACCAGGGACCGGATGAGCGACTCGGGGGACCCATCCTaGCCCTGGGTGCTTGGTGTCTCCAGTACTGCTCGCTCAGGACTT +
Preference number: 5 (lower is better)
Translates to: RSPTRDRMSDSGDPS*PWVLGVSSTARSGL
Trigger: AAGTCCTGAGCGAGCAGTACTGGAGACACCAAGCACCCAGGGTCAGGATGGGTCCCCCGAGTCGCTCATCCGGTCCCTGGTGGGTGACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CCGGCTCCCAGCATCATGGGCTGCCAGAGCCTGGAGCATCTTGCCTaGACTCCGGCGGATCTGAGGCTCGGGATTGCACAGCATGTGCAT +
Preference number: 5 (lower is better)
Translates to: PAPSIMGCQSLEHLA*TPADLRLGIAQHVH
Trigger: ATGCACATGCTGTGCAATCCCGAGCCTCAGATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTCTGGCAGCCCATGATGCTGGGAGCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CAGGTTCGTATCCAGGCTGGAGATCTGCACAGTGGCCAAGACCGCTaGCACATGCTGATCCAGGGAGCTGCGCGGACCAGGACCCCGCAA +
Preference number: 5 (lower is better)
Translates to: QVRIQAGDLHSGQDR*HMLIQGAARTRTPQ
Trigger: TTGCGGGGTCCTGGTCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCAGCCTGGATACGAACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CCAGGCCCTGGCGGCACAGGATGCGGTCACAGCCCTGAGGGTTGGTaGACCACGTCAGGTTGGAGCAGCTTTCCACATAGCCTCGCAGAA +
Preference number: 5 (lower is better)
Translates to: PGPGGTGCGHSPEGW*TTSGWSSFPHSLAE
Trigger: TTCTGCGAGGCTATGTGGAAAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACCGCATCCTGTGCCGCCAGGGCCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GGCACGTTGGACCCTTTCACCTCCCGGGTCTCTACTGAGGGACTCTaGAGCCCAACCCGGAAGTCCTGGGTGGAGTGCTGTAGGATGGCC +
Preference number: 5 (lower is better)
Translates to: GTLDPFTSRVSTEGL*SPTRKSWVECCRMA
Trigger: GGCCATCCTACAGCACTCCACCCAGGACTTCCGGGTTGGGCTGCAGAGTCCCTCAGTAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TGGCACAGGCGCCGAACTTGGGAAGCAAAGGAAGCTGCAGGACCCTaGCGGCTCCGCGTACTCTCCCTGTGTTCCAGGTACTGGTCCAGC +
Preference number: 5 (lower is better)
Translates to: WHRRRTWEAKEAAGP*RLRVLSLCSRYWSS
Trigger: GCTGGACCAGTACCTGGAACACAGGGAGAGTACGCGGAGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GGAGGGGCTTCCACATGTACCAGCAAGTGGCACAGGCGCCGAACTTaGGAAGCAAAGGAAGCTGCAGGACCCTGGCGGCTCCGCGTACTC +
Preference number: 5 (lower is better)
Translates to: GGASTCTSKWHRRRT*EAKEAAGPWRLRVL
Trigger: GAGTACGCGGAGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGCCACTTGCTGGTACATGTGGAAGCCCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GACTTACAGCAGCAGTGCAGGCAGCAGAGGGAGGGCGAGTCGTCATaGGGTCCTAAGGGGGTGACGCACACAGGGCATTGGTCAGGGCGA +
Preference number: 5 (lower is better)
Translates to: DLQQQCRQQREGESS*GPKGVTHTGHWSGR
Trigger: TCGCCCTGACCAATGCCCTGTGTGCGTCACCCCCTTAGGACCCCATGACGACTCGCCCTCCCTCTGCTGCCTGCACTGCTGCTGTAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CCACTTCCAGCCCTGAGGAGCCCTGGGGTTGATCACTGGGCACGTTaGACCCTTTCACCTCCCGGGTCTCTACTGAGGGACTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: PLPALRSPGVDHWAR*TLSPPGSLLRDSAA
Trigger: GGCTGCAGAGTCCCTCAGTAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCCCAGTGATCAACCCCAGGGCTCCTCAGGGCTGGAAGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGGGGCACGCCATTGTaGCTCTGCTGGAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGGTPL*LCWNSP
Trigger: GGGCGAGTTCCAGCAGAGCAACAATGGCGTGCCCCC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCCAGGGGAGGACCATaGTCTCAGGATGATCCAGCA +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPARGGP*SQDDPA
Trigger: TGCTGGATCATCCTGAGACAATGGTCCTCCCCTGGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCATGCTCGAGGTGAGGTaGCTGCAGAGCTGCGAGTAC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPMLEVR*LQSCEY
Trigger: GTACTCGCAGCTCTGCAGCAACCTCACCTCGAGCAT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGGCCAGAATGTGGGCTaGGGGCCCAGCACCTCCACA +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPGQNVG*GPSTST
Trigger: TGTGGAGGTGCTGGGCCCCAAGCCCACATTCTGGCC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGCACAGGCGCCGAACTaGGGAAGCAAAGGAAGCTGC +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPAQAPN*GSKGSC
Trigger: GCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCTTGGCTTCCAGGACTaGAGGCAGCGCCAGCAGAAC +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPLGFQD*RQRQQN
Trigger: GTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAAG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCTGGCGAGCTGCTTaGCTTACCATGGCAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSWRAA*LTMAEQ
Trigger: CTGCTCTGCCATGGTAAGCAAAGCAGCTCGCCAGGA...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp TTGGCAGCTGACCTTGAGCCCTCCTCTGGCTCTGGGCTACAGGAGTaGCGCCGTGAAGACGGCAAGCTCCCCAGTTCCTTGGGCAGTAGC +
Preference number: 5 (lower is better)
Translates to: LAADLEPSSGSGLQE*RREDGKLPSSLGSS
Trigger: GCTACTGCCCAAGGAACTGGGGAGCTTGCCGTCTTCACGGCGTCACTCCTGTAGCCCAGAGCCAGAGGAGGGCTCAAGGTCAGCTGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp AGCACCCCTCAGTGTTCAGCATCAGGACCACAGCCGCAGGTACACTaGGGAGCAAACTCTCGGAGCCTGGGCGGGTGGCAGAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: STPQCSASGPQPQVH*GANSRSLGGWQSRC
Trigger: GCATCGACTCTGCCACCCGCCCAGGCTCCGAGAGTTTGCTCCTCAGTGTACCTGCGGCTGTGGTCCTGATGCTGAACACTGAGGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp AGAAGTGCTCAAACGTCGTGGCCAGCTCTAGGCCAGAAAGGACCATaGTGGGCTCTAGGTGCCGCTGGAGCCGCCCCAGCATCCCCACTC +
Preference number: 5 (lower is better)
Translates to: RSAQTSWPALGQKGP*WALGAAGAAPASPL
Trigger: GAGTGGGGATGCTGGGGCGGCTCCAGCGGCACCTAGAGCCCATCATGGTCCTTTCTGGCCTAGAGCTGGCCACGACGTTTGAGCACTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CCATCATGTCCAGGCCTCTGTCGAAGGAGTTCTTCAGGGTACGCCTaGAGCCGAGGCCCCAAGGGTACCAGAAGGTTCCCTGCACGCCGT +
Preference number: 5 (lower is better)
Translates to: PSCPGLCRRSSSGYA*SRGPKGTRRFPARR
Trigger: ACGGCGTGCAGGGAACCTTCTGGTACCCTTGGGGCCTCGGCTGCAGGCGTACCCTGAAGAACTCCTTCGACAGAGGCCTGGACATGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GCCCTGATAGCTGCAGGTTCGTATCCAGGCTGGAGATCTGCACAGTaGCCAAGACCGCTGCCACATGCTGATCCAGGGAGCTGCGCGGAC +
Preference number: 5 (lower is better)
Translates to: ALIAAGSYPGWRSAQ*PRPLPHADPGSCAD
Trigger: GTCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCAGCCTGGATACGAACCTGCAGCTATCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TTCACGAGCTTCTCTCTCAACGGTCTGTCAGGACGGACCAGGGGGTaGTCTCGCTCAGTGACCTCCTCCACAGCCTGGGAGAGGGCACAG +
Preference number: 5 (lower is better)
Translates to: FTSFSLNGLSGRTRG*SRSVTSSTAWERAQ
Trigger: CTGTGCCCTCTCCCAGGCTGTGGAGGAGGTCACTGAGCGAGACCACCCCCTGGTCCGTCCTGACAGACCGTTGAGAGAGAAGCTCGTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GGCTCAGGAGAAGGCCCAGGAGGGGCTTCCACATGTACCAGCAAGTaGCACAGGCGCCGAACTTGGGAAGCAAAGGAAGCTGCAGGACCC +
Preference number: 5 (lower is better)
Translates to: GSGEGPGGASTCTSK*HRRRTWEAKEAAGP
Trigger: GGGTCCTGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGCCACTTGCTGGTACATGTGGAAGCCCCTCCTGGGCCTTCTCCTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CTTCTTCCAGCCCTGAGGAGCCCTGGGGTTGATCACTGGGCACGTTaGACCCTTTCACCTCCCGGGTCTCTACTGAGGGACTCTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLPALRSPGVDHWAR*TLSPPGSLLRDSAA
Trigger: GGCTGCAGAGTCCCTCAGTAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCCCAGTGATCAACCCCAGGGCTCCTCAGGGCTGGAAGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066026.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCCTCTTCGCTACACTaGAGGACACTCCAGCGGATC +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPSSLH*RTLQRI
Trigger: GATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGAGGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCCTCCATCTCTGTCATaGCCAACTCATCCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPPPSLS*PTHPGL
Trigger: GAGGCCTGGATGAGTTGGCAATGACAGAGATGGAGG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCTGATGCAGCCAACATaGTCACCCCCAAACACCACC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPLMQPT*SPPNTT
Trigger: GGTGGTGTTTGGGGGTGACAATGTTGGCTGCATCAG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGTCCCGGCTCCATGCTaGTGCCCGAATTGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPVPAPC*CPNCVE
Trigger: TTCTACACAATTCGGGCACAAGCATGGAGCCGGGAC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTGGCCCGGCAGGCATCTaGCAGGAAGGTGAAGGATTT +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPGPAGI*QEGEGF
Trigger: AAATCCTTCACCTTCCTGCAAGATGCCTGCCGGGCC...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp AGTCAAGGAAGAGTTCTGCTGACAGGTCACCCACCAGGGACCGGATaGGCGACTCGGGGGACCCATCCTGACCCTGGGTGCTTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: SQGRVLLTGHPPGTG*ATRGTHPDPGCLVS
Trigger: AGACACCAAGCACCCAGGGTCAGGATGGGTCCCCCGAGTCGCTCATCCGGTCCCTGGTGGGTGACCTGTCAGCAGAACTCTTCCTTGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp TTGATCACTGGGCACGTTGGACCCTTTCACCTCCCGGGTCTCTACTaGGGGACTCTGCAGCCCAACCCGGAAGTCCTGGGTGGAGTGCTG +
Preference number: 5 (lower is better)
Translates to: LITGHVGPFHLPGLY*GTLQPNPEVLGGVL
Trigger: CAGCACTCCACCCAGGACTTCCGGGTTGGGCTGCAGAGTCCCTCAGTAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCCCAGTGATCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TCTGGGGTTCGGGCTGGAGATACGGCAGTGAGTACAGGCCATGTGTaGGCTTCCAGTCCCAGGAGGGACACACTGTGCCCAGTACAGCTG +
Preference number: 5 (lower is better)
Translates to: SGVRAGDTAVSTGHV*ASSPRRDTLCPVQL
Trigger: CAGCTGTACTGGGCACAGTGTGTCCCTCCTGGGACTGGAAGCCCACACATGGCCTGTACTCACTGCCGTATCTCCAGCCCGAACCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp ACACTGAGATACGTCTGGGGAGGTATCAGCCACAGGACCTCTTCATaGGTCTGGGACCTAGGCTCACGAAGCCGCAGCACCCCGCCCTGT +
Preference number: 5 (lower is better)
Translates to: TLRYVWGGISHRTSS*VWDLGSRSRSTPPC
Trigger: ACAGGGCGGGGTGCTGCGGCTTCGTGAGCCTAGGTCCCAGACCCATGAAGAGGTCCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAGCAGGTCGCAGAGGTaGCTGCCCTCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSRSQR*LPSKRL
Trigger: CAACCGCTTTGAGGGCAGCAACCTCTGCGACCTGCT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCCTTCTCTGAGAAGTaGGCAGCTGACCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSFSEK*AADLEP
Trigger: GGGCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCGTTTGGAGATGAGCTaGGCCAAGTGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPRLEMS*AKCLLW
Trigger: CCAGAGCAAGCACTTGGCCAAGCTCATCTCCAAACG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp TGCCACCCTCCCTGGCAAAGAGCGGACGCCATTCATGCTTGGTCATaGGCAGGTAGAGGAGGCGCAGGGCCATCACCACCACCATCTTCT +
Preference number: 5 (lower is better)
Translates to: CHPPWQRADAIHAWS*AGRGGAGPSPPPSS
Trigger: AGAAGATGGTGGTGGTGATGGCCCTGCGCCTCCTCTACCTGCTCATGACCAAGCATGAATGGCGTCCGCTCTTTGCCAGGGAGGGTGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp CACATCCTCTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCCAGCCCTaGGGAGCCCTGGGGTTGATCACTGGGCACGTTGGACCCTTTCAC +
Preference number: 5 (lower is better)
Translates to: HILFLLLLLLLFFQP*GALGLITGHVGPFH
Trigger: GTGAAAGGGTCCAACGTGCCCAGTGATCAACCCCAGGGCTCCTCAGGGCTGGAAGAAGAGGAGGAGGAGGAGGAGGAGGAAGAGGATGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066026.8
CDS GCA 90 bp GTGCGTGTGGTGGGCATTGGCTCTGTCCCCGGCGCTATCCCCGAGTaGCTGAACAAGGTGTCTCTCAGCTCCTGCGTTATGATCTGGTCT +
Preference number: 5 (lower is better)
Translates to: VRVVGIGSVPGAIPE*LNKVSLSSCVMIWS
Trigger: AGACCAGATCATAACGCAGGAGCTGAGAGACACCTTGTTCAGGCACTCGGGGATAGCGCCGGGGACAGAGCCAATGCCCACCACACGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp TGTCATCACGCCGTTCCACATAGCCCTGGCCCAGGAGATGCAGGATaGAAGAGAGAACATCAGTGCTGGAGCAGGCCACACCCACTGCCG +
Preference number: 5 (lower is better)
Translates to: CHHAVPHSPGPGDAG*KREHQCWSRPHPLP
Trigger: CGGCAGTGGGTGTGGCCTGCTCCAGCACTGATGTTCTCTCTTGCATCCTGCATCTCCTGGGCCAGGGCTATGTGGAACGGCGTGATGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CTCCATCTCTGTCATTGCCAACTCATCCAGGCCTCCAGGGTCTCGTaGGAAGCTTCCCACCTCTCCAGCAGGTTCGTGCTGCGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LHLCHCQLIQASRVS*EASHLSSRFVLRAF
Trigger: AAAGGCCCGCAGCACGAACCTGCTGGAGAGGTGGGAAGCTTCCCACGAGACCCTGGAGGCCTGGATGAGTTGGCAATGACAGAGATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TGGGTCAGGTACCCTGACTCCTCCTCGTTCTTCTGGGGTTCGGGCTaGAGATACGGCAGTGAGTACAGGCCATGTGTGGGCTTCCAGTCC +
Preference number: 5 (lower is better)
Translates to: WVRYPDSSSFFWGSG*RYGSEYRPCVGFQS
Trigger: GGACTGGAAGCCCACACATGGCCTGTACTCACTGCCGTATCTCCAGCCCGAACCCCAGAAGAACGAGGAGGAGTCAGGGTACCTGACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CACCACTCTGCCTGGGTCAGGTACCCTGACTCCTCCTCGTTCTTCTaGGGTTCGGGCTGGAGATACGGCAGTGAGTACAGGCCATGTGTG +
Preference number: 5 (lower is better)
Translates to: HHSAWVRYPDSSSFF*GSGWRYGSEYRPCV
Trigger: CACACATGGCCTGTACTCACTGCCGTATCTCCAGCCCGAACCCCAGAAGAACGAGGAGGAGTCAGGGTACCTGACCCAGGCAGAGTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GGGGCACAGCATTGGCTCTGCAGGCCTCTTCCTTCTCTGAGAAGTTaGCAGCTGACCTTGAGCCCTCCTCTGGCTCTGGGCTACAGGAGT +
Preference number: 5 (lower is better)
Translates to: GAQHWLCRPLPSLRS*QLTLSPPLALGYRS
Trigger: ACTCCTGTAGCCCAGAGCCAGAGGAGGGCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGGAAGAGGCCTGCAGAGCCAATGCTGTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GGGAGAGGGCACAGAGCCCTGATAGCTGCAGGTTCGTATCCAGGCTaGAGATCTGCACAGTGGCCAAGACCGCTGCCACATGCTGATCCA +
Preference number: 5 (lower is better)
Translates to: GRGHRALIAAGSYPG*RSAQWPRPLPHADP
Trigger: TGGATCAGCATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCAGCCTGGATACGAACCTGCAGCTATCAGGGCTCTGTGCCCTCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CAGGACCACAGCCGCAGGTACACTGAGGAGCAAACTCTCGGAGCCTaGGCGGGTGGCAGAGTCGATGCTGGCAAAGATCTCTCTGGTCAT +
Preference number: 5 (lower is better)
Translates to: QDHSRRYTEEQTLGA*AGGRVDAGKDLSGH
Trigger: ATGACCAGAGAGATCTTTGCCAGCATCGACTCTGCCACCCGCCCAGGCTCCGAGAGTTTGCTCCTCAGTGTACCTGCGGCTGTGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GCTCAGAGGCCAGCAGGAGCTGAGTGGAGTGCTTGTCCAGGACTTTaGAGAGGGCTTCCTTACCTCCCAGGCAGCAAAGCACCACTGCGT +
Preference number: 5 (lower is better)
Translates to: AQRPAGAEWSACPGL*RGLPYLPGSKAPLR
Trigger: ACGCAGTGGTGCTTTGCTGCCTGGGAGGTAAGGAAGCCCTCTCCAAAGTCCTGGACAAGCACTCCACTCAGCTCCTGCTGGCCTCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTCCTCTGAGCTCACTTaGCCCTCTTCGCTACACTTG +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPSSELT*PSSLHL
Trigger: CAAGTGTAGCGAAGAGGGCAAAGTGAGCTCAGAGGA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCCCACGTCCAACTTCTaGATGAAGAACAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPPTSNF*MKNSSS
Trigger: GGAGCTACTGTTCTTCATCAAGAAGTTGGACGTGGG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCGCAGATTCTGGAAAATaGGCTGCTGTTCACCCACGT +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPADSGK*AAVHPR
Trigger: ACGTGGGTGAACAGCAGCCAATTTTCCAGAATCTGC...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCCCCAAAGTGTGGTGGTaGCATAGAAGCAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPPKVWW*HRSRLR
Trigger: TCTCAACCTGCTTCTATGCAACCACCACACTTTGGG...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTTGCTTGTCCAGGACTTaGGAGAGGGCTTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPCLSRT*ERASLP
Trigger: AGGTAAGGAAGCCCTCTCCAAAGTCCTGGACAAGCA...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCAGTGTTAAAGGACCATaGTCAGAGGTGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPSVKGP*SEVRGR
Trigger: TCTGCCCCTCACCTCTGACAATGGTCCTTTAACACT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCACCCATGGTTACATCTaGCACAGGTCATGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPTHGYI*HRSCAD
Trigger: GTCTGCACATGACCTGTGCAAGATGTAACCATGGGT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp GCACAGGTCATGTGCAGACACCCCTCGTTCTTCTCGATCGGCGCCTaGCAGCTAGGGCAGCGTTTGGAGATGAGCTTGGCCAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: AQVMCRHPSFFSIGA*QLGQRLEMSLAKCL
Trigger: CAAGCACTTGGCCAAGCTCATCTCCAAACGCTGCCCTAGCTGTCAGGCGCCGATCGAGAAGAACGAGGGGTGTCTGCACATGACCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CACTGGCAAGCTCCATCTCTGCCTCTGGGGGCACAGCATTGGCTCTaGAGGCCTCTTCCTTCTCTGAGAAGTTGGCAGCTGACCTTGAGC +
Preference number: 5 (lower is better)
Translates to: HWQAPSLPLGAQHWL*RPLPSLRSWQLTLS
Trigger: GCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGGAAGAGGCCTGCAGAGCCAATGCTGTGCCCCCAGAGGCAGAGATGGAGCTTGCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GCAGTGGTTCTGGGTCATCGCTGTAGCTCTGCAGCAGCTGCTCTGTaGCCCAGTGGGAATGAGCCAGAAGGTGCTGAGCTACATCTGGCT +
Preference number: 5 (lower is better)
Translates to: AVVLGHRCSSAAAAL*PSGNEPEGAELHLA
Trigger: AGCCAGATGTAGCTCAGCACCTTCTGGCTCATTCCCACTGGGGCACAGAGCAGCTGCTGCAGAGCTACAGCGATGACCCAGAACCACTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp ATCCGAGTTGTCAGGTACTCGTTCCAGCAAGACTTACAGCAGCAGTaGAGGCAGCAGAGGGAGGGCGAGTCGTCATGGGGTCCTAAGGGG +
Preference number: 5 (lower is better)
Translates to: IRVVRYSFQQDLQQQ*RQQREGESSWGPKG
Trigger: CCCCTTAGGACCCCATGACGACTCGCCCTCCCTCTGCTGCCTGCACTGCTGCTGTAAGTCTTGCTGGAACGAGTACCTGACAACTCGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CAGCGCAGCAGGGTCTCCTCGAGCAGGATCTGCAGGGCGTTCGTATaGAGCTCCAGGTTCTCCGTCTGCTGTTCTACCACATCCATGTAC +
Preference number: 5 (lower is better)
Translates to: QRSRVSSSRICRAFV*SSRFSVCCSTTSMY
Trigger: GTACATGGATGTGGTAGAACAGCAGACGGAGAACCTGGAGCTGCATACGAACGCCCTGCAGATCCTGCTCGAGGAGACCCTGCTGCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GTCCTATGTCCAAGACTGGGCAGTTCTGACTGTGGCTGTAGAAGCTaGAGAAGCGCTCCAGGGCATCGCAGAGCTCCGCCTGTAGGTGCT +
Preference number: 5 (lower is better)
Translates to: VLCPRLGSSDCGCRS*RSAPGHRRAPPVGA
Trigger: AGCACCTACAGGCGGAGCTCTGCGATGCCCTGGAGCGCTTCTCCAGCTTCTACAGCCACAGTCAGAACTGCCCAGTCTTGGACATAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCTCCCACGTCCAACTTCTaGATGAAGAACAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: VLQTLGIPSPMTPCGPAPPTSNF*MKNSSS
Trigger: GGAGCTACTGTTCTTCATCAAGAAGTTGGACGTGGG...AGGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTCCTTCTCTGAGAAGTaGGCAGCTGACCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSFSEK*AADLEP
Trigger: GGGCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGGA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCGAGGCCCAGCCGCACTaGGAGCAGGTGGTCCCACTG +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPEAQPH*EQVVPL
Trigger: CAGTGGGACCACCTGCTCCAAGTGCGGCTGGGCCTC...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp GCTTTGCAAGCGTTGATAGAGACTACAGTAACGGGGCACAAAGTCTaGGGCCCTCCAGGCTGCGGCCAGGAATCTGCTGACCTGTCCCTG +
Preference number: 5 (lower is better)
Translates to: ALQALIETTVTGHKV*GPPGCGQESADLSL
Trigger: CAGGGACAGGTCAGCAGATTCCTGGCCGCAGCCTGGAGGGCCTCAGACTTTGTGCCCCGTTACTGTAGTCTCTATCAACGCTTGCAAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TCTGAGGAAGGTGGATGCCCTCCAAGGCCATGCAGTGCTCCTCTGTaGACGTGGTCTCCGCAAACAGCTCCAGTAAAGTGTAGCGGCTGT +
Preference number: 5 (lower is better)
Translates to: SEEGGCPPRPCSAPL*TWSPQTAPVKCSGC
Trigger: ACAGCCGCTACACTTTACTGGAGCTGTTTGCGGAGACCACGTCCACAGAGGAGCACTGCATGGCCTTGGAGGGCATCCACCTTCCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CGGAGCCTGGGCGGGTGGCAGAGTCGATGCTGGCAAAGATCTCTCTaGTCATCTGGGTATCAAACAGAGGTTGGATGGAATCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: RSLGGWQSRCWQRSL*SSGYQTEVGWNLGW
Trigger: CCAGCCGAGATTCCATCCAACCTCTGTTTGATACCCAGATGACCAGAGAGATCTTTGCCAGCATCGACTCTGCCACCCGCCCAGGCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CAGCCATGTCCACTGAAGTCGCCGGTGTGGTCCTATGTCCAAGACTaGGCAGTTCTGACTGTGGCTGTAGAAGCTGGAGAAGCGCTCCAG +
Preference number: 5 (lower is better)
Translates to: QPCPLKSPVWSYVQD*AVLTVAVEAGEALQ
Trigger: CTGGAGCGCTTCTCCAGCTTCTACAGCCACAGTCAGAACTGCCCAGTCTTGGACATAGGACCACACCGGCGACTTCAGTGGACATGGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp ACCTCCGGGGAGGAGACAATGTTACGGATGAAGGCTCCAGTGGGCTaGGCAGGACAGTCAGCGATGGGGCAGGTACAGTTCAGTACAAAG +
Preference number: 5 (lower is better)
Translates to: TSGEETMLRMKAPVG*AGQSAMGQVQFSTK
Trigger: CTTTGTACTGAACTGTACCTGCCCCATCGCTGACTGTCCTGCCCAGCCCACTGGAGCCTTCATCCGTAACATTGTCTCCTCCCCGGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp ACAGGATGCGGTCACAGCCCTGAGGGTTGGTGCACCACGTCAGGTTaGAGCAGCTTTCCACATAGCCTCGCAGAAGGGCCTTCTCATACT +
Preference number: 5 (lower is better)
Translates to: TGCGHSPEGWCTTSG*SSFPHSLAEGPSHT
Trigger: AGTATGAGAAGGCCCTTCTGCGAGGCTATGTGGAAAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACCGCATCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTTCTCTCCCACCTGGTaGGTTAGCAAATCCACCAGG +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPFSPTW*VSKSTR
Trigger: CCTGGTGGATTTGCTAACCAACCAGGTGGGAGAGAA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CCCGGCGCTATCCCCGAGTGCCTGAACAAGGTGTCTCTCAGCTCCTaGGTTATGATCTGGTCTCCCAAAGTGTGGTGGTTGCATAGAAGC +
Preference number: 5 (lower is better)
Translates to: PGAIPECLNKVSLSS*VMIWSPKVWWLHRS
Trigger: GCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGACACCTTGTTCAGGCACTCGGGGATAGCGCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAGAGCCTGGAGCATCTaGCCTGCACTCCGGCGGATC +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPRAWSI*PALRRI
Trigger: GATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTCT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCGCAGATTCTGGAAAATaGGCTGCTGTTCACCCACGT +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPADSGK*AAVHPR
Trigger: ACGTGGGTGAACAGCAGCCAATTTTCCAGAATCTGC...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTGCCCCACCAAGACGGATGTCTaGTATTCTTGCATGCAAATC +
Preference number: 5 (lower is better)
Translates to: GASDTGNPLSHDTLRPCPTKTDV*YSCMQI
Trigger: GATTTGCATGCAAGAATACAAGACATCCGTCTTGGT...GGGGCAGGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCAGTGTTAAAGGACCATaGTCAGAGGTGAGGGGCAGA +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPSVKGP*SEVRGR
Trigger: TCTGCCCCTCACCTCTGACAATGGTCCTTTAACACT...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp CTGTCTTCTCCTCCTCTGAGCTCACTTTGCCCTCTTCGCTACACTTaGGGACACTCCAGCGGATCAGGTACTCGGGATGGCCATCATGTC +
Preference number: 5 (lower is better)
Translates to: LSSPPLSSLCPLRYT*GHSSGSGTRDGHHV
Trigger: GACATGATGGCCATCCCGAGTACCTGATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGAGGGCAAAGTGAGCTCAGAGGAGGAGAAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp CCAGTCCTGCCTGCTGCACCAAGACGGATGTCTTGTATTCTTGCATaGAAATCAGCACAGCGTAGATGCCACCCTCCCTGGCAAAGAGCG +
Preference number: 5 (lower is better)
Translates to: PVLPAAPRRMSCILA*KSAQRRCHPPWQRA
Trigger: CGCTCTTTGCCAGGGAGGGTGGCATCTACGCTGTGCTGATTTGCATGCAAGAATACAAGACATCCGTCTTGGTGCAGCAGGCAGGACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TCTTCGCTACACTTGAGGACACTCCAGCGGATCAGGTACTCGGGATaGCCATCATGTCCAGGCCTCTGTCGAAGGAGTTCTTCAGGGTAC +
Preference number: 5 (lower is better)
Translates to: SSLHLRTLQRIRYSG*PSCPGLCRRSSSGY
Trigger: GTACCCTGAAGAACTCCTTCGACAGAGGCCTGGACATGATGGCCATCCCGAGTACCTGATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GAAGGTGGATGCCCTCCAAGGCCATGCAGTGCTCCTCTGTGGACGTaGTCTCCGCAAACAGCTCCAGTAAAGTGTAGCGGCTGTCAAAAT +
Preference number: 5 (lower is better)
Translates to: EGGCPPRPCSAPLWT*SPQTAPVKCSGCQN
Trigger: ATTTTGACAGCCGCTACACTTTACTGGAGCTGTTTGCGGAGACCACGTCCACAGAGGAGCACTGCATGGCCTTGGAGGGCATCCACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TTGTGGCTTGGCTTCCAGGACTTGAGGCAGCGCCAGCAGAACCCATaGTTACATCTTGCACAGGTCATGTGCAGACACCCCTCGTTCTTC +
Preference number: 5 (lower is better)
Translates to: LWLGFQDLRQRQQNP*LHLAQVMCRHPSFF
Trigger: GAAGAACGAGGGGTGTCTGCACATGACCTGTGCAAGATGTAACCATGGGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAAGCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGGGGGCACGCCATTGTaGCTCTGCTGGAACTCGCCC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPGGTPL*LCWNSP
Trigger: GGGCGAGTTCCAGCAGAGCAACAATGGCGTGCCCCC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCAGCAGGTCGCAGAGGTaGCTGCCCTCAAAGCGGTTG +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSRSQR*LPSKRL
Trigger: CAACCGCTTTGAGGGCAGCAACCTCTGCGACCTGCT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAGACGCACACAGGGCATaGGTCAGGGCGAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPDAHRA*VRASGD
Trigger: GTCCCCACTCGCCCTGACCAATGCCCTGTGTGCGTC...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp ACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTGCGGCCCTTTGTTCTATCCGAGTaGTCAGGTACTCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TEGASDTGNPLSHDTLRPFVLSE*SGTRSS
Trigger: GCTGGAACGAGTACCTGACAACTCGGATAGAACAAA...GGGCCGCAGGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp GGTTCCTCTTCTGTTCCAAGGTCCGGCCCTCATCCTTTTCTACACTaGGATACGTCTGGGGAGGTATCAGCCACAGGACCTCTTCATGGG +
Preference number: 5 (lower is better)
Translates to: GSSSVPRSGPHPFLH*DTSGEVSATGPLHG
Trigger: CCCATGAAGAGGTCCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGTAGAAAAGGATGAGGGCCGGACCTTGGAACAGAAGAGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 90 bp TGGCAGAGCAGTTGTAGTAGTCCTTGTGGCTTGGCTTCCAGGACTTaGGGCAGCGCCAGCAGAACCCATGGTTACATCTTGCACAGGTCA +
Preference number: 5 (lower is better)
Translates to: WQSSCSSPCGLASRT*GSASRTHGYILHRS
Trigger: TGACCTGTGCAAGATGTAACCATGGGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAAGCCACAAGGACTACTACAACTGCTCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GGGCGGGTGGCAGAGTCGATGCTGGCAAAGATCTCTCTGGTCATCTaGGTATCAAACAGAGGTTGGATGGAATCTCGGCTGGGGATGAAA +
Preference number: 5 (lower is better)
Translates to: GRVAESMLAKISLVI*VSNRGWMESRLGMK
Trigger: TTTCATCCCCAGCCGAGATTCCATCCAACCTCTGTTTGATACCCAGATGACCAGAGAGATCTTTGCCAGCATCGACTCTGCCACCCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TGTTCCAAGGTCCGGCCCTCATCCTTTTCTACACTGAGATACGTCTaGGGAGGTATCAGCCACAGGACCTCTTCATGGGTCTGGGACCTA +
Preference number: 5 (lower is better)
Translates to: CSKVRPSSFSTLRYV*GGISHRTSSWVWDL
Trigger: TAGGTCCCAGACCCATGAAGAGGTCCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGTAGAAAAGGATGAGGGCCGGACCTTGGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCCCTCTTCGCTACACTaGAGGACACTCCAGCGGATC +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPPSSLH*RTLQRI
Trigger: GATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGAGGG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAGAGCCTGGAGCATCTaGCCTGCACTCCGGCGGATC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPRAWSI*PALRRI
Trigger: GATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTCT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAGCTTGGCCAAGTGCTaGCTCTGGGCCTCCACGCTC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSLAKC*LWASTL
Trigger: GAGCGTGGAGGCCCAGAGCAAGCACTTGGCCAAGCT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp TGCTTTGCTTACCATGGCAGAGCAGTTGTAGTAGTCCTTGTGGCTTaGCTTCCAGGACTTGAGGCAGCGCCAGCAGAACCCATGGTTACA +
Preference number: 5 (lower is better)
Translates to: CFAYHGRAVVVVLVA*LPGLEAAPAEPMVT
Trigger: TGTAACCATGGGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAAGCCACAAGGACTACTACAACTGCTCTGCCATGGTAAGCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCAAGCAGCAGAGTTCTGTaGGGCCCGGGGGCATCTAGA +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPSSRVL*GPGASR
Trigger: TCTAGATGCCCCCGGGCCCAACAGAACTCTGCTGCT...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGACGCACACAGGGCATaGGTCAGGGCGAGTGGGGAC +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLDAHRA*VRASGD
Trigger: GTCCCCACTCGCCCTGACCAATGCCCTGTGTGCGTC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCCGTTTGGAGATGAGCTaGGCCAAGTGCTTGCTCTGG +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPRLEMS*AKCLLW
Trigger: CCAGAGCAAGCACTTGGCCAAGCTCATCTCCAAACG...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGCCTGGTTCCGCAGGTaGACAGCAAACTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLAWFRR*TANSRA
Trigger: GGCCCGGGAGTTTGCTGTCAACCTGCGGAACCAGGC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp AGACGGATGTCTTGTATTCTTGCATGCAAATCAGCACAGCGTAGATaGCACCCTCCCTGGCAAAGAGCGGACGCCATTCATGCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: RRMSCILACKSAQRR*HPPWQRADAIHAWS
Trigger: TGACCAAGCATGAATGGCGTCCGCTCTTTGCCAGGGAGGGTGGCATCTACGCTGTGCTGATTTGCATGCAAGAATACAAGACATCCGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp CCCGAGTGCCTGAACAAGGTGTCTCTCAGCTCCTGCGTTATGATCTaGTCTCCCAAAGTGTGGTGGTTGCATAGAAGCAGGTTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: PECLNKVSLSSCVMI*SPKVWWLHRSRLRR
Trigger: TCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGACACCTTGTTCAGGCACTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTCCTCTGAGCTCACTTaGCCCTCTTCGCTACACTTG +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPSSELT*PSSLHL
Trigger: CAAGTGTAGCGAAGAGGGCAAAGTGAGCTCAGAGGA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCTTCTCTCCCACCTGGTaGGTTAGCAAATCCACCAGG +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPFSPTW*VSKSTR
Trigger: CCTGGTGGATTTGCTAACCAACCAGGTGGGAGAGAA...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GAGGAATTAGCAATGGCCAGCATCTTGAGTGCTGCCAGTCCTGCCTaGTGCACCAAGACGGATGTCTTGTATTCTTGCATGCAAATCAGC +
Preference number: 5 (lower is better)
Translates to: EELAMASILSAASPA*CTKTDVLYSCMQIS
Trigger: GCTGATTTGCATGCAAGAATACAAGACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCCATTGCTAATTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 90 bp GTCGGAGGAATTAGCAATGGCCAGCATCTTGAGTGCTGCCAGTCCTaGCTGCTGCACCAAGACGGATGTCTTGTATTCTTGCATGCAAAT +
Preference number: 5 (lower is better)
Translates to: VGGISNGQHLECCQS*LLHQDGCLVFLHAN
Trigger: ATTTGCATGCAAGAATACAAGACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCCATTGCTAATTCCTCCGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp GTGTCTCTCAGCTCCTGCGTTATGATCTGGTCTCCCAAAGTGTGGTaGTTGCATAGAAGCAGGTTGAGAAGAAGCAGGCCGTTTCTCACT +
Preference number: 5 (lower is better)
Translates to: VSLSSCVMIWSPKVW*LHRSRLRRSRPFLT
Trigger: AGTGAGAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 90 bp AAGGTGTCTCTCAGCTCCTGCGTTATGATCTGGTCTCCCAAAGTGTaGTGGTTGCATAGAAGCAGGTTGAGAAGAAGCAGGCCGTTTCTC +
Preference number: 5 (lower is better)
Translates to: KVSLSSCVMIWSPKV*WLHRSRLRRSRPFL
Trigger: GAGAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGACACCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACTGATGCAGCCAACATaGTCACCCCCAAACACCACC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPLMQPT*SPPNTT
Trigger: GGTGGTGTTTGGGGGTGACAATGTTGGCTGCATCAG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTAGCAGCAGAGTTCTGTaGGGCCCGGGGGCATCTAGA +
Preference number: 5 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSSSRVL*GPGASR
Trigger: TCTAGATGCCCCCGGGCCCAACAGAACTCTGCTGCT...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGCTTGTCCAGGACTTaGGAGAGGGCTTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPCLSRT*ERASLP
Trigger: AGGTAAGGAAGCCCTCTCCAAAGTCCTGGACAAGCA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCATGCTCGAGGTGAGGTaGCTGCAGAGCTGCGAGTAC +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLMLEVR*LQSCEY
Trigger: GTACTCGCAGCTCTGCAGCAACCTCACCTCGAGCAT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGCCAGGGGAGGACCATaGTCTCAGGATGATCCAGCA +
Preference number: 5 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSARGGP*SQDDPA
Trigger: TGCTGGATCATCCTGAGACAATGGTCCTCCCCTGGC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCGTCCCGGCTCCATGCTaGTGCCCGAATTGTGTAGAA +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLVPAPC*CPNCVE
Trigger: TTCTACACAATTCGGGCACAAGCATGGAGCCGGGAC...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCACAAACCACCGTGGATTaGTTGGTCAATGTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPQTTVD*LVNVPS
Trigger: GCTAGGCACATTGACCAACAAATCCACGGTGGTTTG...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTGGCCCGGCAGGCATCTaGCAGGAAGGTGAAGGATTT +
Preference number: 5 (lower is better)
Translates to: KRGLFSKQKVLQTLGIPSGPAGI*QEGEGF
Trigger: AAATCCTTCACCTTCCTGCAAGATGCCTGCCGGGCC...AGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp TTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATGACACCCACCAAGACGGATGTCTaGTATTCTTGCATGCAAATC +
Preference number: 5 (lower is better)
Translates to: FSKQKVLQTLGIPSPMTPTKTDV*YSCMQI
Trigger: GATTTGCATGCAAGAATACAAGACATCCGTCTTGGT...GGGTGTCATGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp GAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCATTTGTTCTATCCGAGTaGTCAGGTACTCGTTCCAGC +
Preference number: 5 (lower is better)
Translates to: EVYSVNRRCFRHWESPLPFVLSE*SGTRSS
Trigger: GCTGGAACGAGTACCTGACAACTCGGATAGAACAAA...TGGGAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCCCAAAGTGTGGTGGTaGCATAGAAGCAGGTTGAGA +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLPKVWW*HRSRLR
Trigger: TCTCAACCTGCTTCTATGCAACCACCACACTTTGGG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCCAAACCACCGTGGATTaGTTGGTCAATGTGCCTAGC +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLQTTVD*LVNVPS
Trigger: GCTAGGCACATTGACCAACAAATCCACGGTGGTTTG...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS-3UTR CAA 90 bp AAAGAGGTTTATTCAGTAAACAGAAGGTGCTTCAGACACTGGGAATCCCCTCTCACCCATGGTTACATCTaGCACAGGTCATGTGCAGAC +
Preference number: 5 (lower is better)
Translates to: KEVYSVNRRCFRHWESPLTHGYI*HRSCAD
Trigger: GTCTGCACATGACCTGTGCAAGATGTAACCATGGGT...GAGAGGGGATTCCCAGTGTCTGAAGCACCTTCTGTTTACTGAATAAACCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GCAGCCGTCAGGCTCGAGGTCCCACCCTCCGCCAGCTaGCTGGCAGCCCTGCGCACCAGCGCCCGGACATCA +
Preference number: 6 (lower is better)
Translates to: AAVRLEVPPSAS*LAALRTSARTS
Trigger: TGATGTCCGGGCGCTGGTGCGCAGGGCTGCCAGGCAGCTGGCGGAGGGTGGGACCTCGAGCCTGACGGCTGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CCGTCAGGCTCGAGGTCCCACCCTCCGCCAGCTGCCTaGCAGCCCTGCGCACCAGCGCCCGGACATCAGCCT +
Preference number: 6 (lower is better)
Translates to: PSGSRSHPPPAA*QPCAPAPGHQP
Trigger: AGGCTGATGTCCGGGCGCTGGTGCGCAGGGCTGCCAGGCAGCTGGCGGAGGGTGGGACCTCGAGCCTGACGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp AAGAGGCCCAGCCGCACTTGGAGCAGGTGGTCCCACTaGCCAGGCCCTGGCGGCACAGGATGCGGTCACAGC +
Preference number: 6 (lower is better)
Translates to: KRPSRTWSRWSH*PGPGGTGCGHS
Trigger: GCTGTGACCGCATCCTGTGCCGCCAGGGCCTGGGCAGTGGGACCACCTGCTCCAAGTGCGGCTGGGCCTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGGCATTGGTCAGGGCGAGTGGGGACCACCTGGGCCTaGGGTACTCGCAGCCCTGCCGCAAGGAGCAGTGGT +
Preference number: 6 (lower is better)
Translates to: GHWSGRVGTTWA*GTRSPAARSSG
Trigger: ACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTCCCCACTCGCCCTGACCAATGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CACACAGGGCATTGGTCAGGGCGAGTGGGGACCACCTaGGCCTGGGGTACTCGCAGCCCTGCCGCAAGGAGC +
Preference number: 6 (lower is better)
Translates to: HTGHWSGRVGTT*AWGTRSPAARS
Trigger: GCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTCCCCACTCGCCCTGACCAATGCCCTGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp ATCGGGATGGCCTGGGCGGCAAAGCGCCCTGCTCACTaGGGTTCCGTGCCCAGCCCATGCTCCGCACCAGCT +
Preference number: 6 (lower is better)
Translates to: IGMAWAAKRPAH*GSVPSPCSAPA
Trigger: AGCTGGTGCGGAGCATGGGCTGGGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCCCAGGCCATCCCGAT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp CAGTGCTGGAGCAGGCCACACCCACTGCCGCAGCGTTaGCTAGGCGCCCAGGTGGATCTGGACCCTTCTGCC +
Preference number: 6 (lower is better)
Translates to: QCWSRPHPLPQR*LGAQVDLDPSA
Trigger: GGCAGAAGGGTCCAGATCCACCTGGGCGCCTAGGCAACGCTGCGGCAGTGGGTGTGGCCTGCTCCAGCACTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GCAGAGGCGGAGGGCCTGAGAGGCATGGCTGGAAGATaGATCGGGATGGCCTGGGCGGCAAAGCGCCCTGCT +
Preference number: 6 (lower is better)
Translates to: AEAEGLRGMAGR*IGMAWAAKRPA
Trigger: AGCAGGGCGCTTTGCCGCCCAGGCCATCCCGATCCATCTTCCAGCCATGCCTCTCAGGCCCTCCGCCTCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp GTCTGTCAGGACGGACCAGGGGGTGGTCTCGCTCAGTaGCCTCCTCCACAGCCTGGGAGAGGGCACAGAGCC +
Preference number: 6 (lower is better)
Translates to: VCQDGPGGGLAQ*PPPQPGRGHRA
Trigger: GGCTCTGTGCCCTCTCCCAGGCTGTGGAGGAGGTCACTGAGCGAGACCACCCCCTGGTCCGTCCTGACAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CCCAGGCCCTGGCGGCACAGGATGCGGTCACAGCCCTaGGGGTTGGTGCACCACGTCAGGTTGGAGCAGCTT +
Preference number: 6 (lower is better)
Translates to: PRPWRHRMRSQP*GLVHHVRLEQL
Trigger: AAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACCGCATCCTGTGCCGCCAGGGCCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp AAGATGGATCGGGATGGCCTGGGCGGCAAAGCGCCCTaGTCACTGAGGTTCCGTGCCCAGCCCATGCTCCGC +
Preference number: 6 (lower is better)
Translates to: KMDRDGLGGKAP*SLRFRAQPMLR
Trigger: GCGGAGCATGGGCTGGGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCCCAGGCCATCCCGATCCATCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGTAGCAGCAGAGGCGGAGGGCCTGAGAGGCATGGCTaGAAGATGGATCGGGATGGCCTGGGCGGCAAAGCG +
Preference number: 6 (lower is better)
Translates to: GSSRGGGPERHG*KMDRDGLGGKA
Trigger: CGCTTTGCCGCCCAGGCCATCCCGATCCATCTTCCAGCCATGCCTCTCAGGCCCTCCGCCTCTGCTGCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GTCCGCAGCAACAGGAGGAATGGCTGCGTTTCCTGCTaGAGGCGCCTGAGGAGGGGCCTCACGGCAGCTGGA +
Preference number: 6 (lower is better)
Translates to: VRSNRRNGCVSC*RRLRRGLTAAG
Trigger: TCCAGCTGCCGTGAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTTGCTGCGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp GAGAGAACATCAGTGCTGGAGCAGGCCACACCCACTGCCGCAGCGTaGCCTAGGCGCCCAGGTGGATCTGGACCCTTCTGCCAGGCCTCC +
Preference number: 6 (lower is better)
Translates to: ERTSVLEQATPTAAA*PRRPGGSGPFCQAS
Trigger: GGAGGCCTGGCAGAAGGGTCCAGATCCACCTGGGCGCCTAGGCAACGCTGCGGCAGTGGGTGTGGCCTGCTCCAGCACTGATGTTCTCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp GAGATCTGCACAGTGGCCAAGACCGCTGCCACATGCTaGTCCAGGGAGCTGCGCGGACCAGGACCCCGCAAG +
Preference number: 6 (lower is better)
Translates to: EICTVAKTAATC*SRELRGPGPRK
Trigger: CTTGCGGGGTCCTGGTCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp AGAGTTCTGCTGACAGGTCACCCACCAGGGACCGGATaGGCGACTCGGGGGACCCATCCTGACCCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: RVLLTGHPPGTG*ATRGTHPDPGC
Trigger: GCACCCAGGGTCAGGATGGGTCCCCCGAGTCGCTCATCCGGTCCCTGGTGGGTGACCTGTCAGCAGAACTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp CCTGGGCGGCAAAGCGCCCTGCTCACTGAGGTTCCGTaGCCAGCCCATGCTCCGCACCAGCTCAGAAATGAG +
Preference number: 6 (lower is better)
Translates to: PGRQSALLTEVP*PAHAPHQLRNE
Trigger: CTCATTTCTGAGCTGGTGCGGAGCATGGGCTGGGCACGGAACCTCAGTGAGCAGGGCGCTTTGCCGCCCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TGGCCAAGACCGCTGCCACATGCTGATCCAGGGAGCTaGGCGGACCAGGACCCCGCAAGGCTCTGGCCATTT +
Preference number: 6 (lower is better)
Translates to: WPRPLPHADPGS*ADQDPARLWPF
Trigger: AAATGGCCAGAGCCTTGCGGGGTCCTGGTCCGCGCAGCTCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GGGGCATCTAGAGTCCGCAGCAACAGGAGGAATGGCTaGGTTTCCTGCTGGAGGCGCCTGAGGAGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: GASRVRSNRRNG*VSCWRRLRRGL
Trigger: GAGGCCCCTCCTCAGGCGCCTCCAGCAGGAAACGCAGCCATTCCTCCTGTTGCTGCGGACTCTAGATGCCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp AGCTCTAGGCCAGAAAGGACCATGATGGGCTCTAGGTaGCGCTGGAGCCGCCCCAGCATCCCCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: SSRPERTMMGSR*RWSRPSIPTPA
Trigger: GGCTGGAGTGGGGATGCTGGGGCGGCTCCAGCGGCACCTAGAGCCCATCATGGTCCTTTCTGGCCTAGAGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp AGTGGGGACCACCTGGGCCTGGGGTACTCGCAGCCCTaGCGCAAGGAGCAGTGGTTCTGGGTCATCGCTGTA +
Preference number: 6 (lower is better)
Translates to: SGDHLGLGYSQP*RKEQWFWVIAV
Trigger: TACAGCGATGACCCAGAACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCCCAGGTGGTCCCCACT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GAGCGACTCGGGGGACCCATCCTGACCCTGGGTGCTTaGTGTCTCCAGTACTGCTCGCTCAGGACTTCCCCG +
Preference number: 6 (lower is better)
Translates to: ERLGGPILTLGA*CLQYCSLRTSP
Trigger: CGGGGAAGTCCTGAGCGAGCAGTACTGGAGACACCAAGCACCCAGGGTCAGGATGGGTCCCCCGAGTCGCTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TGGGGAGGTATCAGCCACAGGACCTCTTCATGGGTCTaGGACCTAGGCTCACGAAGCCGCAGCACCCCGCCC +
Preference number: 6 (lower is better)
Translates to: WGGISHRTSSWV*DLGSRSRSTPP
Trigger: GGGCGGGGTGCTGCGGCTTCGTGAGCCTAGGTCCCAGACCCATGAAGAGGTCCTGTGGCTGATACCTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGCCTGGGGTACTCGCAGCCCTGCCGCAAGGAGCAGTaGTTCTGGGTCATCGCTGTAGCTCTGCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: GLGYSQPCRKEQ*FWVIAVALQQL
Trigger: CAGCTGCTGCAGAGCTACAGCGATGACCCAGAACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCCCAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CAGCAGTGCAGGCAGCAGAGGGAGGGCGAGTCGTCATaGGGTCCTAAGGGGGTGACGCACACAGGGCATTGG +
Preference number: 6 (lower is better)
Translates to: QQCRQQREGESS*GPKGVTHTGHW
Trigger: CCAATGCCCTGTGTGCGTCACCCCCTTAGGACCCCATGACGACTCGCCCTCCCTCTGCTGCCTGCACTGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp ACTCCAGCTCCTGCTGCGCCCGGCTCTTCTCCTTTGTaGGACACGGGGAGCTCTGGTCCCCAGCTCCTGACT +
Preference number: 6 (lower is better)
Translates to: TPAPAAPGSSPL*DTGSSGPQLLT
Trigger: AGTCAGGAGCTGGGGACCAGAGCTCCCCGTGTCTCACAAAGGAGAAGAGCCGGGCGCAGCAGGAGCTGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CAAACGTCGTGGCCAGCTCTAGGCCAGAAAGGACCATaGTGGGCTCTAGGTGCCGCTGGAGCCGCCCCAGCA +
Preference number: 6 (lower is better)
Translates to: QTSWPALGQKGP*WALGAAGAAPA
Trigger: TGCTGGGGCGGCTCCAGCGGCACCTAGAGCCCATCATGGTCCTTTCTGGCCTAGAGCTGGCCACGACGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp GGGCACGTTGGACCCTTTCACCTCCCGGGTCTCTACTaGGGGACTCTGCAGCCCAACCCGGAAGTCCTGGGT +
Preference number: 6 (lower is better)
Translates to: GHVGPFHLPGLY*GTLQPNPEVLG
Trigger: ACCCAGGACTTCCGGGTTGGGCTGCAGAGTCCCTCAGTAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TCCCAGCATCATGGGCTGCCAGAGCCTGGAGCATCTTaGCTGCACTCCGGCGGATCTGAGGCTCGGGATTGC +
Preference number: 6 (lower is better)
Translates to: SQHHGLPEPGAS*LHSGGSEARDC
Trigger: GCAATCCCGAGCCTCAGATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTCTGGCAGCCCATGATGCTGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CTGCTGACCTGTCCCTGCACCACACTCAGCCAGCACTaGGTGAGGTTCCGAAGGCTGGTGCTGGGACAGACC +
Preference number: 6 (lower is better)
Translates to: LLTCPCTTLSQH*VRFRRLVLGQT
Trigger: GGTCTGTCCCAGCACCAGCCTTCGGAACCTCACCCAGTGCTGGCTGAGTGTGGTGCAGGGACAGGTCAGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GCCCTGAGGAGCCCTGGGGTTGATCACTGGGCACGTTaGACCCTTTCACCTCCCGGGTCTCTACTGAGGGAC +
Preference number: 6 (lower is better)
Translates to: ALRSPGVDHWAR*TLSPPGSLLRD
Trigger: GTCCCTCAGTAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCCCAGTGATCAACCCCAGGGCTCCTCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp CAGCCCTGCGCACCAGCGCCCGGACATCAGCCTCCATCTCTGTCATaGCCAACTCATCCAGGCCTCCAGGGTCTCGTGGGAAGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: QPCAPAPGHQPPSLS*PTHPGLQGLVGSFP
Trigger: TGGGAAGCTTCCCACGAGACCCTGGAGGCCTGGATGAGTTGGCAATGACAGAGATGGAGGCTGATGTCCGGGCGCTGGTGCGCAGGGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp AGGAGGGGCTTCCACATGTACCAGCAAGTGGCACAGGCGCCGAACTaGGGAAGCAAAGGAAGCTGCAGGACCCTGGCGGCTCCGCGTACT +
Preference number: 6 (lower is better)
Translates to: RRGFHMYQQVAQAPN*GSKGSCRTLAAPRT
Trigger: AGTACGCGGAGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGCCACTTGCTGGTACATGTGGAAGCCCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp TCGTCTTCCACTTCCAGCCCTGAGGAGCCCTGGGGTTaGTCACTGGGCACGTTGGACCCTTTCACCTCCCGG +
Preference number: 6 (lower is better)
Translates to: SSSTSSPEEPWG*SLGTLDPFTSR
Trigger: CCGGGAGGTGAAAGGGTCCAACGTGCCCAGTGATCAACCCCAGGGCTCCTCAGGGCTGGAAGTGGAAGACGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000182485.8
CDS GCA 72 bp CCAGGCCTCTGTCGAAGGAGTTCTTCAGGGTACGCCTaGAGCCGAGGCCCCAAGGGTACCAGAAGGTTCCCT +
Preference number: 6 (lower is better)
Translates to: PGLCRRSSSGYA*SRGPKGTRRFP
Trigger: AGGGAACCTTCTGGTACCCTTGGGGCCTCGGCTGCAGGCGTACCCTGAAGAACTCCTTCGACAGAGGCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp CGTGGGAAGCTTCCCACCTCTCCAGCAGGTTCGTGCTaGGGGCCTTTAGGTATTGGCCGCTCCCTCAGTAGC +
Preference number: 6 (lower is better)
Translates to: RGKLPTSPAGSC*GPLGIGRSLSS
Trigger: GCTACTGAGGGAGCGGCCAATACCTAAAGGCCCGCAGCACGAACCTGCTGGAGAGGTGGGAAGCTTCCCACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp AGCATCATGGGCTGCCAGAGCCTGGAGCATCTTGCCTaGACTCCGGCGGATCTGAGGCTCGGGATTGCACAG +
Preference number: 6 (lower is better)
Translates to: SIMGCQSLEHLA*TPADLRLGIAQ
Trigger: CTGTGCAATCCCGAGCCTCAGATCCGCCGGAGTGCAGGCAAGATGCTCCAGGCTCTGGCAGCCCATGATGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp CATGTGTGGGCTTCCAGTCCCAGGAGGGACACACTGTaGCCAGTACAGCTGCCCCTGCTCCCTTCTCCACAG +
Preference number: 6 (lower is better)
Translates to: HVWASSPRRDTL*PVQLPLLPSPQ
Trigger: CTGTGGAGAAGGGAGCAGGGGCAGCTGTACTGGGCACAGTGTGTCCCTCCTGGGACTGGAAGCCCACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TGGTCTCCCTGCTCCAAGAGCTGCCTGTCGAGCTGCTaGAGCTGGAAGAGGTGGAAGCGATGCTGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: WSPCSKSCLSSC*SWKRWKRCCSS
Trigger: GGAGCTGCAGCATCGCTTCCACCTCTTCCAGCTGCAGCAGCTCGACAGGCAGCTCTTGGAGCAGGGAGACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GGCGGCACAGGATGCGGTCACAGCCCTGAGGGTTGGTaGACCACGTCAGGTTGGAGCAGCTTTCCACATAGC +
Preference number: 6 (lower is better)
Translates to: GGTGCGHSPEGW*TTSGWSSFPHS
Trigger: GCTATGTGGAAAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACCGCATCCTGTGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CGGGCTGGAGATACGGCAGTGAGTACAGGCCATGTGTaGGCTTCCAGTCCCAGGAGGGACACACTGTGCCCA +
Preference number: 6 (lower is better)
Translates to: RAGDTAVSTGHV*ASSPRRDTLCP
Trigger: TGGGCACAGTGTGTCCCTCCTGGGACTGGAAGCCCACACATGGCCTGTACTCACTGCCGTATCTCCAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TTCTCTCTCAACGGTCTGTCAGGACGGACCAGGGGGTaGTCTCGCTCAGTGACCTCCTCCACAGCCTGGGAG +
Preference number: 6 (lower is better)
Translates to: FSLNGLSGRTRG*SRSVTSSTAWE
Trigger: CTCCCAGGCTGTGGAGGAGGTCACTGAGCGAGACCACCCCCTGGTCCGTCCTGACAGACCGTTGAGAGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGGTACTCGCAGCCCTGCCGCAAGGAGCAGTGGTTCTaGGTCATCGCTGTAGCTCTGCAGCAGCTGCTCTGT +
Preference number: 6 (lower is better)
Translates to: GYSQPCRKEQWF*VIAVALQQLLC
Trigger: ACAGAGCAGCTGCTGCAGAGCTACAGCGATGACCCAGAACCACTGCTCCTTGCGGCAGGGCTGCGAGTACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CCTGGCGGCACAGGATGCGGTCACAGCCCTGAGGGTTaGTGCACCACGTCAGGTTGGAGCAGCTTTCCACAT +
Preference number: 6 (lower is better)
Translates to: PGGTGCGHSPEG*CTTSGWSSFPH
Trigger: ATGTGGAAAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACCGCATCCTGTGCCGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp ATCCATGTGCTGCTCGATGCCGTCGTGCTGGCTCAGTaGCAGAAGGACGTGAGCCCGGCTCCCAGCATCATG +
Preference number: 6 (lower is better)
Translates to: IHVLLDAVVLAQ*QKDVSPAPSIM
Trigger: CATGATGCTGGGAGCCGGGCTCACGTCCTTCTGTCACTGAGCCAGCACGACGGCATCGAGCAGCACATGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CCCTGGCAAAGAGCGGACGCCATTCATGCTTGGTCATaGGCAGGTAGAGGAGGCGCAGGGCCATCACCACCA +
Preference number: 6 (lower is better)
Translates to: PWQRADAIHAWS*AGRGGAGPSPP
Trigger: TGGTGGTGATGGCCCTGCGCCTCCTCTACCTGCTCATGACCAAGCATGAATGGCGTCCGCTCTTTGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CTCCAGTACTGCTCGCTCAGGACTTCCCCGTGGCTCTaGGTAGCGACTGAGGAGCATGGTGAGGATGGTGCG +
Preference number: 6 (lower is better)
Translates to: LQYCSLRTSPWL*VATEEHGEDGA
Trigger: CGCACCATCCTCACCATGCTCCTCAGTCGCTACTCAGAGCCACGGGGAAGTCCTGAGCGAGCAGTACTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CAGACCGGAGTAGGTGCCGGTGTGGGGCTTCCATCCTaGCCCTTACTGTTCTTGCTGAGGGGCTGCGAGGAT +
Preference number: 6 (lower is better)
Translates to: QTGVGAGVGLPS*PLLFLLRGCED
Trigger: ATCCTCGCAGCCCCTCAGCAAGAACAGTAAGGGTCAGGATGGAAGCCCCACACCGGCACCTACTCCGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CAGCTGGAAGAGGTGGAAGCGATGCTGCAGCTCCTCTaGGGTGTGCAGGCTTTGCAGCATCAGCTGCGGGAG +
Preference number: 6 (lower is better)
Translates to: QLEEVEAMLQLL*GVQALQHQLRE
Trigger: CTCCCGCAGCTGATGCTGCAAAGCCTGCACACCTCAGAGGAGCTGCAGCATCGCTTCCACCTCTTCCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TCTCGTGGGAAGCTTCCCACCTCTCCAGCAGGTTCGTaGTGCGGGCCTTTAGGTATTGGCCGCTCCCTCAGT +
Preference number: 6 (lower is better)
Translates to: SRGKLPTSPAGS*CGPLGIGRSLS
Trigger: ACTGAGGGAGCGGCCAATACCTAAAGGCCCGCAGCACGAACCTGCTGGAGAGGTGGGAAGCTTCCCACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GTGGGCATTGGCTCTGTCCCCGGCGCTATCCCCGAGTaGCTGAACAAGGTGTCTCTCAGCTCCTGCGTTATG +
Preference number: 6 (lower is better)
Translates to: VGIGSVPGAIPE*LNKVSLSSCVM
Trigger: CATAACGCAGGAGCTGAGAGACACCTTGTTCAGGCACTCGGGGATAGCGCCGGGGACAGAGCCAATGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GCTTGGCCAAGTGCTTGCTCTGGGCCTCCACGCTCATaGCGTCATAGTAGCCACCATCATCCACCCACTGCG +
Preference number: 6 (lower is better)
Translates to: AWPSACSGPPRS*RHSSHHHPPTA
Trigger: CGCAGTGGGTGGATGATGGTGGCTACTATGACGGCATGAGCGTGGAGGCCCAGAGCAAGCACTTGGCCAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GCCCGGCTCTTCTCCTTTGTGAGACACGGGGAGCTCTaGTCCCCAGCTCCTGACTCTGGGCTGTTATTCAGC +
Preference number: 6 (lower is better)
Translates to: ARLFSFVRHGEL*SPAPDSGLLFS
Trigger: GCTGAATAACAGCCCAGAGTCAGGAGCTGGGGACCAGAGCTCCCCGTGTCTCACAAAGGAGAAGAGCCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GCCTGGGTCAGGTACCCTGACTCCTCCTCGTTCTTCTaGGGTTCGGGCTGGAGATACGGCAGTGAGTACAGG +
Preference number: 6 (lower is better)
Translates to: AWVRYPDSSSFF*GSGWRYGSEYR
Trigger: CCTGTACTCACTGCCGTATCTCCAGCCCGAACCCCAGAAGAACGAGGAGGAGTCAGGGTACCTGACCCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GCTGCAGGTTCGTATCCAGGCTGGAGATCTGCACAGTaGCCAAGACCGCTGCCACATGCTGATCCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: AAGSYPGWRSAQ*PRPLPHADPGS
Trigger: GCTCCCTGGATCAGCATGTGGCAGCGGTCTTGGCCACTGTGCAGATCTCCAGCCTGGATACGAACCTGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp AGCCGCAGGTACACTGAGGAGCAAACTCTCGGAGCCTaGGCGGGTGGCAGAGTCGATGCTGGCAAAGATCTC +
Preference number: 6 (lower is better)
Translates to: SRRYTEEQTLGA*AGGRVDAGKDL
Trigger: GAGATCTTTGCCAGCATCGACTCTGCCACCCGCCCAGGCTCCGAGAGTTTGCTCCTCAGTGTACCTGCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp AGGAGGGGCCTCACGGCAGCTGGAGGGCTGCCTTCATaGCACAGCACGCGTTCCAAGTCAAGGAAGAGTTCT +
Preference number: 6 (lower is better)
Translates to: RRGLTAAGGLPS*HSTRSKSRKSS
Trigger: AGAACTCTTCCTTGACTTGGAACGCGTGCTGTGCCATGAAGGCAGCCCTCCAGCTGCCGTGAGGCCCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TCCACATGTACCAGCAAGTGGCACAGGCGCCGAACTTaGGAAGCAAAGGAAGCTGCAGGACCCTGGCGGCTC +
Preference number: 6 (lower is better)
Translates to: STCTSKWHRRRT*EAKEAAGPWRL
Trigger: GAGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGCCACTTGCTGGTACATGTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CCAAGACTGGGCAGTTCTGACTGTGGCTGTAGAAGCTaGAGAAGCGCTCCAGGGCATCGCAGAGCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: PRLGSSDCGCRS*RSAPGHRRAPP
Trigger: AGGCGGAGCTCTGCGATGCCCTGGAGCGCTTCTCCAGCTTCTACAGCCACAGTCAGAACTGCCCAGTCTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp AGCCCGGCCCAGCCATGTCCACTGAAGTCGCCGGTGTaGTCCTATGTCCAAGACTGGGCAGTTCTGACTGTG +
Preference number: 6 (lower is better)
Translates to: SPAQPCPLKSPV*SYVQDWAVLTV
Trigger: CACAGTCAGAACTGCCCAGTCTTGGACATAGGACCACACCGGCGACTTCAGTGGACATGGCTGGGCCGGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TACGTCTGGGGAGGTATCAGCCACAGGACCTCTTCATaGGTCTGGGACCTAGGCTCACGAAGCCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: YVWGGISHRTSS*VWDLGSRSRST
Trigger: GGTGCTGCGGCTTCGTGAGCCTAGGTCCCAGACCCATGAAGAGGTCCTGTGGCTGATACCTCCCCAGACGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGTCACAGCCCTGAGGGTTGGTGCACCACGTCAGGTTaGAGCAGCTTTCCACATAGCCTCGCAGAAGGGCCT +
Preference number: 6 (lower is better)
Translates to: GHSPEGWCTTSG*SSFPHSLAEGP
Trigger: AGGCCCTTCTGCGAGGCTATGTGGAAAGCTGCTCCAACCTGACGTGGTGCACCAACCCTCAGGGCTGTGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CCGGCAGGCATCTTGCAGGAAGGTGAAGGATTTGGGTaGAGGCACCTCTTGGATGGCAGAGGCCTGGTTCCG +
Preference number: 6 (lower is better)
Translates to: PAGILQEGEGFG*RHLLDGRGLVP
Trigger: CGGAACCAGGCCTCTGCCATCCAAGAGGTGCCTCCACCCAAATCCTTCACCTTCCTGCAAGATGCCTGCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CTTCTTCCAGCCCTGAGGAGCCCTGGGGTTGATCACTaGGCACGTTGGACCCTTTCACCTCCCGGGTCTCTA +
Preference number: 6 (lower is better)
Translates to: LLPALRSPGVDH*ARWTLSPPGSL
Trigger: TAGAGACCCGGGAGGTGAAAGGGTCCAACGTGCCCAGTGATCAACCCCAGGGCTCCTCAGGGCTGGAAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000066026.8
CDS CAA 90 bp AGCAGTCGGGTCATGACCCTGAGTATCGTGAGCAGCAGAGTTCTGTaGGGCCCGGGGGCATCTAGAGTCCGCAGCAACAGGAGGAATGGC +
Preference number: 6 (lower is better)
Translates to: SSRVMTLSIVSSRVL*GPGASRVRSNRRNG
Trigger: GCCATTCCTCCTGTTGCTGCGGACTCTAGATGCCCCCGGGCCCAACAGAACTCTGCTGCTCACGATACTCAGGGTCATGACCCGACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp ATGTGCAGACACCCCTCGTTCTTCTCGATCGGCGCCTaGCAGCTAGGGCAGCGTTTGGAGATGAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MCRHPSFFSIGA*QLGQRLEMSLA
Trigger: GGCCAAGCTCATCTCCAAACGCTGCCCTAGCTGTCAGGCGCCGATCGAGAAGAACGAGGGGTGTCTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp CAGGGATCTGAGGAAGGTGGATGCCCTCCAAGGCCATaGAGTGCTCCTCTGTGGACGTGGTCTCCGCAAACA +
Preference number: 6 (lower is better)
Translates to: QGSEEGGCPPRP*SAPLWTWSPQT
Trigger: TGTTTGCGGAGACCACGTCCACAGAGGAGCACTGCATGGCCTTGGAGGGCATCCACCTTCCTCAGATCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GAGGGCTTCCTTACCTCCCAGGCAGCAAAGCACCACTaGGTAGTCTTTCTGCATCAGAGCCAGGCGGTGCAG +
Preference number: 6 (lower is better)
Translates to: EGFLTSQAAKHH*VVFLHQSQAVQ
Trigger: CTGCACCGCCTGGCTCTGATGCAGAAAGACTACGCAGTGGTGCTTTGCTGCCTGGGAGGTAAGGAAGCCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TCGAGCTGCTGCAGCTGGAAGAGGTGGAAGCGATGCTaGAGCTCCTCTGAGGTGTGCAGGCTTTGCAGCATC +
Preference number: 6 (lower is better)
Translates to: SSCCSWKRWKRC*SSSEVCRLCSI
Trigger: GATGCTGCAAAGCCTGCACACCTCAGAGGAGCTGCAGCATCGCTTCCACCTCTTCCAGCTGCAGCAGCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GTCAGGTACTCGTTCCAGCAAGACTTACAGCAGCAGTaGAGGCAGCAGAGGGAGGGCGAGTCGTCATGGGGT +
Preference number: 6 (lower is better)
Translates to: VRYSFQQDLQQQ*RQQREGESSWG
Trigger: ACCCCATGACGACTCGCCCTCCCTCTGCTGCCTGCACTGCTGCTGTAAGTCTTGCTGGAACGAGTACCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TGTCATTGCCAACTCATCCAGGCCTCCAGGGTCTCGTaGGAAGCTTCCCACCTCTCCAGCAGGTTCGTGCTG +
Preference number: 6 (lower is better)
Translates to: CHCQLIQASRVS*EASHLSSRFVL
Trigger: CAGCACGAACCTGCTGGAGAGGTGGGAAGCTTCCCACGAGACCCTGGAGGCCTGGATGAGTTGGCAATGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TGCCCTCCAAGGCCATGCAGTGCTCCTCTGTGGACGTaGTCTCCGCAAACAGCTCCAGTAAAGTGTAGCGGC +
Preference number: 6 (lower is better)
Translates to: CPPRPCSAPLWT*SPQTAPVKCSG
Trigger: GCCGCTACACTTTACTGGAGCTGTTTGCGGAGACCACGTCCACAGAGGAGCACTGCATGGCCTTGGAGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CATTGGCTCTGCAGGCCTCTTCCTTCTCTGAGAAGTTaGCAGCTGACCTTGAGCCCTCCTCTGGCTCTGGGC +
Preference number: 6 (lower is better)
Translates to: HWLCRPLPSLRS*QLTLSPPLALG
Trigger: GCCCAGAGCCAGAGGAGGGCTCAAGGTCAGCTGCCAACTTCTCAGAGAAGGAAGAGGCCTGCAGAGCCAATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp GTCATGACCCTGAGTATCGTGAGCAGCAGAGTTCTGTaGGGCCCGGGGGCATCTAGAGTCCGCAGCAACAGG +
Preference number: 6 (lower is better)
Translates to: VMTLSIVSSRVL*GPGASRVRSNR
Trigger: CCTGTTGCTGCGGACTCTAGATGCCCCCGGGCCCAACAGAACTCTGCTGCTCACGATACTCAGGGTCATGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp TTCCACATGTACCAGCAAGTGGCACAGGCGCCGAACTaGGGAAGCAAAGGAAGCTGCAGGACCCTGGCGGCT +
Preference number: 6 (lower is better)
Translates to: FHMYQQVAQAPN*GSKGSCRTLAA
Trigger: AGCCGCCAGGGTCCTGCAGCTTCCTTTGCTTCCCAAGTTCGGCGCCTGTGCCACTTGCTGGTACATGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp GCAGGCATCTTGCAGGAAGGTGAAGGATTTGGGTGGAGGCACCTCTaGGATGGCAGAGGCCTGGTTCCGCAGGTTGACAGCAAACTCCCG +
Preference number: 6 (lower is better)
Translates to: AGILQEGEGFGWRHL*DGRGLVPQVDSKLP
Trigger: CGGGAGTTTGCTGTCAACCTGCGGAACCAGGCCTCTGCCATCCAAGAGGTGCCTCCACCCAAATCCTTCACCTTCCTGCAAGATGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp GTCTTTGCACTGGCAAGCTCCATCTCTGCCTCTGGGGGCACAGCATaGGCTCTGCAGGCCTCTTCCTTCTCTGAGAAGTTGGCAGCTGAC +
Preference number: 6 (lower is better)
Translates to: VFALASSISASGGTA*ALQASSFSEKLAAD
Trigger: GTCAGCTGCCAACTTCTCAGAGAAGGAAGAGGCCTGCAGAGCCAATGCTGTGCCCCCAGAGGCAGAGATGGAGCTTGCCAGTGCAAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CCTCCTCTGAGCTCACTTTGCCCTCTTCGCTACACTTaGGGACACTCCAGCGGATCAGGTACTCGGGATGGC +
Preference number: 6 (lower is better)
Translates to: PPLSSLCPLRYT*GHSSGSGTRDG
Trigger: GCCATCCCGAGTACCTGATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGAGGGCAAAGTGAGCTCAGAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CTTTGTGAGACACGGGGAGCTCTGGTCCCCAGCTCCTaGCTCTGGGCTGTTATTCAGCTGATCCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: LCETRGALVPSS*LWAVIQLIQQG
Trigger: TCCCTGCTGGATCAGCTGAATAACAGCCCAGAGTCAGGAGCTGGGGACCAGAGCTCCCCGTGTCTCACAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp GCGTTGATAGAGACTACAGTAACGGGGCACAAAGTCTaGGGCCCTCCAGGCTGCGGCCAGGAATCTGCTGAC +
Preference number: 6 (lower is better)
Translates to: ALIETTVTGHKV*GPPGCGQESAD
Trigger: GTCAGCAGATTCCTGGCCGCAGCCTGGAGGGCCTCAGACTTTGTGCCCCGTTACTGTAGTCTCTATCAACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp CCCTTCTGCCAGGCCTCCAGTACCAGACAAACCAGCTaGTCGATGTGCAGGCCTTTCTCCCTGTGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: PFCQASSTRQTS*SMCRPFSLWAL
Trigger: CAAAGCCCACAGGGAGAAAGGCCTGCACATCGATCAGCTGGTTTGTCTGGTACTGGAGGCCTGGCAGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp AGGGTCTCCTCGAGCAGGATCTGCAGGGCGTTCGTATaGAGCTCCAGGTTCTCCGTCTGCTGTTCTACCACA +
Preference number: 6 (lower is better)
Translates to: RVSSSRICRAFV*SSRFSVCCSTT
Trigger: TGTGGTAGAACAGCAGACGGAGAACCTGGAGCTGCATACGAACGCCCTGCAGATCCTGCTCGAGGAGACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TGGCAAGCTCCATCTCTGCCTCTGGGGGCACAGCATTaGCTCTGCAGGCCTCTTCCTTCTCTGAGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: WQAPSLPLGAQH*LCRPLPSLRSW
Trigger: CCAACTTCTCAGAGAAGGAAGAGGCCTGCAGAGCCAATGCTGTGCCCCCAGAGGCAGAGATGGAGCTTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CCAGCAGGAGCTGAGTGGAGTGCTTGTCCAGGACTTTaGAGAGGGCTTCCTTACCTCCCAGGCAGCAAAGCA +
Preference number: 6 (lower is better)
Translates to: PAGAEWSACPGL*RGLPYLPGSKA
Trigger: TGCTTTGCTGCCTGGGAGGTAAGGAAGCCCTCTCCAAAGTCCTGGACAAGCACTCCACTCAGCTCCTGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GAGGAGACAATGTTACGGATGAAGGCTCCAGTGGGCTaGGCAGGACAGTCAGCGATGGGGCAGGTACAGTTC +
Preference number: 6 (lower is better)
Translates to: EETMLRMKAPVG*AGQSAMGQVQF
Trigger: GAACTGTACCTGCCCCATCGCTGACTGTCCTGCCCAGCCCACTGGAGCCTTCATCCGTAACATTGTCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGCTTCCAGGACTTGAGGCAGCGCCAGCAGAACCCATaGTTACATCTTGCACAGGTCATGTGCAGACACCCC +
Preference number: 6 (lower is better)
Translates to: GFQDLRQRQQNP*LHLAQVMCRHP
Trigger: GGGGTGTCTGCACATGACCTGTGCAAGATGTAACCATGGGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp GCAGGTCGCAGAGGTTGCTGCCCTCAAAGCGGTTGCTaGGAACCTGTAGTACACCCTCAGCCATCTCTATGG +
Preference number: 6 (lower is better)
Translates to: AGRRGCCPQSGC*EPVVHPQPSLW
Trigger: CCATAGAGATGGCTGAGGGTGTACTACAGGTTCTCAGCAACCGCTTTGAGGGCAGCAACCTCTGCGACCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GACGTCGGAGGAATTAGCAATGGCCAGCATCTTGAGTaGTGCCAGTCCTGCCTGCTGCACCAAGACGGATGT +
Preference number: 6 (lower is better)
Translates to: DVGGISNGQHLE*CQSCLLHQDGC
Trigger: ACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCCATTGCTAATTCCTCCGACGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GCAAACTCTCGGAGCCTGGGCGGGTGGCAGAGTCGATaGTGGCAAAGATCTCTCTGGTCATCTGGGTATCAA +
Preference number: 6 (lower is better)
Translates to: ANSRSLGGWQSR*WQRSLWSSGYQ
Trigger: TTGATACCCAGATGACCAGAGAGATCTTTGCCAGCATCGACTCTGCCACCCGCCCAGGCTCCGAGAGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CACTTGAGGACACTCCAGCGGATCAGGTACTCGGGATaGCCATCATGTCCAGGCCTCTGTCGAAGGAGTTCT +
Preference number: 6 (lower is better)
Translates to: HLRTLQRIRYSG*PSCPGLCRRSS
Trigger: AGAACTCCTTCGACAGAGGCCTGGACATGATGGCCATCCCGAGTACCTGATCCGCTGGAGTGTCCTCAAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp TACCATGGCAGAGCAGTTGTAGTAGTCCTTGTGGCTTaGCTTCCAGGACTTGAGGCAGCGCCAGCAGAACCC +
Preference number: 6 (lower is better)
Translates to: YHGRAVVVVLVA*LPGLEAAPAEP
Trigger: GGGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAAGCCACAAGGACTACTACAACTGCTCTGCCATGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp ATGCGGGAATTGAGCAGGTCGCAGAGGTTGCTGCCCTCAAAGCGGTaGCTGAGAACCTGTAGTACACCCTCAGCCATCTCTATGGGCACA +
Preference number: 6 (lower is better)
Translates to: MRELSRSQRLLPSKR*LRTCSTPSAISMGT
Trigger: TGTGCCCATAGAGATGGCTGAGGGTGTACTACAGGTTCTCAGCAACCGCTTTGAGGGCAGCAACCTCTGCGACCTGCTCAATTCCCGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp CATCCCCACTCCAGCCGCTCCGCCAAGCAAACCACCGTGGATTTGTaGGTCAATGTGCCTAGCAAACTGTTCGCTTATGTGAGCAGCCGT +
Preference number: 6 (lower is better)
Translates to: HPHSSRSAKQTTVDL*VNVPSKLFAYVSSR
Trigger: ACGGCTGCTCACATAAGCGAACAGTTTGCTAGGCACATTGACCAACAAATCCACGGTGGTTTGCTTGGCGGAGCGGCTGGAGTGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp GTCGGAGGAATTAGCAATGGCCAGCATCTTGAGTGCTaGCAGTCCTGCCTGCTGCACCAAGACGGATGTCTT +
Preference number: 6 (lower is better)
Translates to: VGGISNGQHLEC*QSCLLHQDGCL
Trigger: AAGACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCCATTGCTAATTCCTCCGAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp ACCAGCAGGGTCAGCTGCCTAATAAGAACACCACGGTaGATGTGTAAGGTGATGGAGTGGGAGCCAGTGCTG +
Preference number: 6 (lower is better)
Translates to: TSRVSCLIRTPR*MCKVMEWEPVL
Trigger: CAGCACTGGCTCCCACTCCATCACCTTACACATGCACCGTGGTGTTCTTATTAGGCAGCTGACCCTGCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TGCAGGGCGTTCGTATGCAGCTCCAGGTTCTCCGTCTaGTGTTCTACCACATCCATGTACTCTGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: CRAFVCSSRFSV*CSTTSMYSVSW
Trigger: CCAGGACACAGAGTACATGGATGTGGTAGAACAGCAGACGGAGAACCTGGAGCTGCATACGAACGCCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp ATCCCCACTCCAGCCGCTCCGCCAAGCAAACCACCGTaGATTTGTTGGTCAATGTGCCTAGCAAACTGTTCG +
Preference number: 6 (lower is better)
Translates to: IPTPAAPPSKPP*ICWSMCLANCS
Trigger: CGAACAGTTTGCTAGGCACATTGACCAACAAATCCACGGTGGTTTGCTTGGCGGAGCGGCTGGAGTGGGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GTCCGGCCCTCATCCTTTTCTACACTGAGATACGTCTaGGGAGGTATCAGCCACAGGACCTCTTCATGGGTC +
Preference number: 6 (lower is better)
Translates to: VRPSSFSTLRYV*GGISHRTSSWV
Trigger: GACCCATGAAGAGGTCCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGTAGAAAAGGATGAGGGCCGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp TTGAGCAGGTCGCAGAGGTTGCTGCCCTCAAAGCGGTaGCTGAGAACCTGTAGTACACCCTCAGCCATCTCT +
Preference number: 6 (lower is better)
Translates to: LSRSQRLLPSKR*LRTCSTPSAIS
Trigger: AGAGATGGCTGAGGGTGTACTACAGGTTCTCAGCAACCGCTTTGAGGGCAGCAACCTCTGCGACCTGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp TCTGTCTTCTCCTCCTCTGAGCTCACTTTGCCCTCTTCGCTACACTaGAGGACACTCCAGCGGATCAGGTACTCGGGATGGCCATCATGT +
Preference number: 6 (lower is better)
Translates to: SVFSSSELTLPSSLH*RTLQRIRYSGWPSC
Trigger: ACATGATGGCCATCCCGAGTACCTGATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGAGGGCAAAGTGAGCTCAGAGGAGGAGAAGACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp AGCCACATGAGGAGATGCTCTGTCTTCTCCTCCTCTGAGCTCACTTaGCCCTCTTCGCTACACTTGAGGACACTCCAGCGGATCAGGTAC +
Preference number: 6 (lower is better)
Translates to: SHMRRCSVFSSSELT*PSSLHLRTLQRIRY
Trigger: GTACCTGATCCGCTGGAGTGTCCTCAAGTGTAGCGAAGAGGGCAAAGTGAGCTCAGAGGAGGAGAAGACAGAGCATCTCCTCATGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp TGCTGCCAGTCCTGCCTGCTGCACCAAGACGGATGTCTTGTATTCTaGCATGCAAATCAGCACAGCGTAGATGCCACCCTCCCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: CCQSCLLHQDGCLVF*HANQHSVDATLPGK
Trigger: TTTGCCAGGGAGGGTGGCATCTACGCTGTGCTGATTTGCATGCAAGAATACAAGACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp GGTCTCCCAAAGTGTGGTGGTTGCATAGAAGCAGGTTaGGAAGAAGCAGGCCGTTTCTCACTGCAGAGGAGC +
Preference number: 6 (lower is better)
Translates to: GLPKCGGCIEAG*EEAGRFSLQRS
Trigger: GCTCCTCTGCAGTGAGAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp TCTGTTCCAAGGTCCGGCCCTCATCCTTTTCTACACTaGGATACGTCTGGGGAGGTATCAGCCACAGGACCT +
Preference number: 6 (lower is better)
Translates to: SVPRSGPHPFLH*DTSGEVSATGP
Trigger: AGGTCCTGTGGCTGATACCTCCCCAGACGTATCTCAGTGTAGAAAAGGATGAGGGCCGGACCTTGGAACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp CCTGCTGCACCAAGACGGATGTCTTGTATTCTTGCATaGAAATCAGCACAGCGTAGATGCCACCCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: PAAPRRMSCILA*KSAQRRCHPPW
Trigger: CCAGGGAGGGTGGCATCTACGCTGTGCTGATTTGCATGCAAGAATACAAGACATCCGTCTTGGTGCAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp ATCCCCGAGTGCCTGAACAAGGTGTCTCTCAGCTCCTaGGTTATGATCTGGTCTCCCAAAGTGTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: IPECLNKVSLSS*VMIWSPKVWWL
Trigger: CAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGACACCTTGTTCAGGCACTCGGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS TCA 72 bp AGTTGTAGTAGTCCTTGTGGCTTGGCTTCCAGGACTTaGGGCAGCGCCAGCAGAACCCATGGTTACATCTTG +
Preference number: 6 (lower is better)
Translates to: SCSSPCGLASRT*GSASRTHGYIL
Trigger: CAAGATGTAACCATGGGTTCTGCTGGCGCTGCCTCAAGTCCTGGAAGCCAAGCCACAAGGACTACTACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CCCAGGGCCTCCTCATCCAGTTTCTCATGCAGATTCTaGAAAATTGGCTGCTGTTCACCCACGTCCAACTTC +
Preference number: 6 (lower is better)
Translates to: PRASSSSFSCRF*KIGCCSPTSNF
Trigger: GAAGTTGGACGTGGGTGAACAGCAGCCAATTTTCCAGAATCTGCATGAGAAACTGGATGAGGAGGCCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp GGCGGGTGGCAGAGTCGATGCTGGCAAAGATCTCTCTaGTCATCTGGGTATCAAACAGAGGTTGGATGGAAT +
Preference number: 6 (lower is better)
Translates to: GGWQSRCWQRSL*SSGYQTEVGWN
Trigger: ATTCCATCCAACCTCTGTTTGATACCCAGATGACCAGAGAGATCTTTGCCAGCATCGACTCTGCCACCCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp AGCTCCTGCGTTATGATCTGGTCTCCCAAAGTGTGGTaGTTGCATAGAAGCAGGTTGAGAAGAAGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: SSCVMIWSPKVW*LHRSRLRRSRP
Trigger: CGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp CACTCCAGCCGCTCCGCCAAGCAAACCACCGTGGATTaGTTGGTCAATGTGCCTAGCAAACTGTTCGCTTAT +
Preference number: 6 (lower is better)
Translates to: HSSRSAKQTTVD*LVNVPSKLFAY
Trigger: ATAAGCGAACAGTTTGCTAGGCACATTGACCAACAAATCCACGGTGGTTTGCTTGGCGGAGCGGCTGGAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp GTTATGATCTGGTCTCCCAAAGTGTGGTGGTTGCATAGAAGCAGGTaGAGAAGAAGCAGGCCGTTTCTCACTGCAGAGGAGCACCCCTCA +
Preference number: 6 (lower is better)
Translates to: VMIWSPKVWWLHRSR*RRSRPFLTAEEHPS
Trigger: TGAGGGGTGCTCCTCTGCAGTGAGAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp TCTCTCAGCTCCTGCGTTATGATCTGGTCTCCCAAAGTGTGGTGGTaGCATAGAAGCAGGTTGAGAAGAAGCAGGCCGTTTCTCACTGCA +
Preference number: 6 (lower is better)
Translates to: SLSSCVMIWSPKVWW*HRSRLRRSRPFLTA
Trigger: TGCAGTGAGAAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp TCTTGTATTCTTGCATGCAAATCAGCACAGCGTAGATaGCACCCTCCCTGGCAAAGAGCGGACGCCATTCAT +
Preference number: 6 (lower is better)
Translates to: SCILACKSAQRR*HPPWQRADAIH
Trigger: ATGAATGGCGTCCGCTCTTTGCCAGGGAGGGTGGCATCTACGCTGTGCTGATTTGCATGCAAGAATACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS GCA 72 bp ATTAGCAATGGCCAGCATCTTGAGTGCTGCCAGTCCTaGCTGCTGCACCAAGACGGATGTCTTGTATTCTTG +
Preference number: 6 (lower is better)
Translates to: ISNGQHLECCQS*LLHQDGCLVFL
Trigger: CAAGAATACAAGACATCCGTCTTGGTGCAGCAGGCAGGACTGGCAGCACTCAAGATGCTGGCCATTGCTAAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp AAGATCTCTCTGGTCATCTGGGTATCAAACAGAGGTTaGATGGAATCTCGGCTGGGGATGAAAGTGGGGACG +
Preference number: 6 (lower is better)
Translates to: KISLVIWVSNRG*MESRLGMKVGT
Trigger: CGTCCCCACTTTCATCCCCAGCCGAGATTCCATCCAACCTCTGTTTGATACCCAGATGACCAGAGAGATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CTCAGCTCCTGCGTTATGATCTGGTCTCCCAAAGTGTaGTGGTTGCATAGAAGCAGGTTGAGAAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LSSCVMIWSPKV*WLHRSRLRRSR
Trigger: CCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CCA 72 bp CTGAACAAGGTGTCTCTCAGCTCCTGCGTTATGATCTaGTCTCCCAAAGTGTGGTGGTTGCATAGAAGCAGG +
Preference number: 6 (lower is better)
Translates to: LNKVSLSSCVMI*SPKVWWLHRSR
Trigger: CCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGAGCTGAGAGACACCTTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 90 bp CGATGGGGCAGGTACAGTTCAGTACAAAGTTTTGTTCTATCCGAGTaGTCAGGTACTCGTTCCAGCAAGACTTACAGCAGCAGTGCAGGC +
Preference number: 6 (lower is better)
Translates to: RWGRYSSVQSFVLSE*SGTRSSKTYSSSAG
Trigger: GCCTGCACTGCTGCTGTAAGTCTTGCTGGAACGAGTACCTGACAACTCGGATAGAACAAAACTTTGTACTGAACTGTACCTGCCCCATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp AAAGATCTCTCTGGTCATCTGGGTATCAAACAGAGGTaGGATGGAATCTCGGCTGGGGATGAAAGTGGGGAC +
Preference number: 6 (lower is better)
Translates to: KDLSGHLGIKQR*DGISAGDESGD
Trigger: GTCCCCACTTTCATCCCCAGCCGAGATTCCATCCAACCTCTGTTTGATACCCAGATGACCAGAGAGATCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp TCCTGCGTTATGATCTGGTCTCCCAAAGTGTGGTGGTaGCATAGAAGCAGGTTGAGAAGAAGCAGGCCGTTT +
Preference number: 6 (lower is better)
Translates to: SCVMIWSPKVWW*HRSRLRRSRPF
Trigger: AAACGGCCTGCTTCTTCTCAACCTGCTTCTATGCAACCACCACACTTTGGGAGACCAGATCATAACGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8
CDS CAA 72 bp AGGTACAGTTCAGTACAAAGTTTTGTTCTATCCGAGTaGTCAGGTACTCGTTCCAGCAAGACTTACAGCAGC +
Preference number: 6 (lower is better)
Translates to: RYSSVQSFVLSE*SGTRSSKTYSS
Trigger: GCTGCTGTAAGTCTTGCTGGAACGAGTACCTGACAACTCGGATAGAACAAAACTTTGTACTGAACTGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000066026.8
ENSMUST00000182485.8