Pregenerated sensors for CUL4B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031095Ensembl transcript IDs: ENSMUST00000016681.15, ENSMUST00000050083.6, ENSMUST00000115118.8, ENSMUST00000147129.8
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAGTTCCAAGGCCAACATTCTATGCAATATAGTTGTACTGATTTaGATTTTCTTTATCTCTTTCCATGTAGTCCCGGTCAATGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: TSSKANILCNIVVLI*IFFISFHVVPVNEG Trigger: TCCCTCATTGACCGGGACTACATGGAAAGAGATAAAGAAAATCCAAATCAGTACAACTATATTGCATAGAATGTTGGCCTTGGAACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR GCA 90 bp | TCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATaGAATATAGTTGTACTGATTTGGATTTTCTTTATCTCTTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SNGYSIMTSSKANIL*NIVVLIWIFFISFH Trigger: ATGGAAAGAGATAAAGAAAATCCAAATCAGTACAACTATATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCGCCACTGGAGTTTCCTaGCACTGTGCTTGCCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: FVTIFNIFALRIFSQNSSATGVS*HCACLS Trigger: ACTTAGGCAAGCACAGTGGCAGGAAACTCCAGTGGC...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR GCA 90 bp | GTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTTGTCCCAAGGTTGACTaGCACTGGAGTTTCCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: VTIFNIFALRIFSQNSSFCPKVD*HWSFLP Trigger: TGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACA...AAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR CAA 90 bp | TCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTaGCCACAGGCTAGTGACTGCAGTGTTCTTCTTAATTCTCCATCC | + |
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Preference number: 2 (lower is better) Translates to: SSISLPLGFLARTLA*PQASDCSVLLNSPS Trigger: GGATGGAGAATTAAGAAGAACACTGCAGTCACTAGCCTGTGGCAAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR GCA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATCTACTGATGCACTCTTaGCAACTAATAGGCGTTTGG | + |
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Preference number: 2 (lower is better) Translates to: LSNGYSIMTSSKANILCNLLMHS*QLIGVW Trigger: CCAAACGCCTATTAGTTGGCAAGAGTGCATCAGTAG...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR TCA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATTGGTACTGTCTGTCTTaGAATACTCTTTCTGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: LSNGYSIMTSSKANILCNWYCLS*NTLSVV Trigger: CACTACAGAAAGAGTATTTCAAGACAGACAGTACCA...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTCTATCCCAGTAGCATaGTTGATCTCTTCTAAACTG | + |
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Preference number: 2 (lower is better) Translates to: LSPSSISLPLGFLARTLASIPVA*LISSKL Trigger: CAGTTTAGAAGAGATCAAGCATGCTACTGGGATAGA...AGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTATCTCTTTCCATGTAGTCCCGGTCAATGAGGGATTCTATTCTCTTCTTACATTAGCAGCACCATaGTTTGAAAAAGAGAGACCT | + |
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Preference number: 2 (lower is better) Translates to: FFISFHVVPVNEGFYSLLTLAAP*FEKERP Trigger: AGGTCTCTCTTTTTCAAACCATGGTGCTGCTAATGT...AAGAAGAGAATAGAATCCCTCATTGACCGGGACTACATGGAAAGAGATAAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCACTGGAGTTTCCTGCCACTGAACATTCCTTCAAGCTaGCTGGTAAAAGCGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: AFSTQCPKVDCHWSFLPLNIPSS*LVKAAP Trigger: TGGAGCCGCTTTTACCAGCAAGCTTGAAGGAATGTT...CAGTGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTGTGCTAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR CAA 90 bp | AGCATCAATTTGGTACTGTCTGTCTTGAAATACTCTTTCTGTAGTGCTTGCTTGCACAGTGTCCCAAGGTaGACTGCCACTGGAGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: SINLVLSVLKYSFCSACLHSVPR*TATGVS Trigger: GGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTG...CAAGCAAGCACTACAGAAAGAGTATTTCAAGACAGACAGTACCAAATTGATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR-3UTR CAA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATTTCTGTAGTGCTTGCTaGTTCTTCAACCGTTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: LSNGYSIMTSSKANILCNFCSAC*FFNRFF Trigger: AAAGAAACGGTTGAAGAACAAGCAAGCACTACAGAA...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| 3UTR GCA 72 bp | GTACTGTCTGTCTTGAAATACTCTTTCTGTAGTGCTTaGTTGTTCTTCAACCGTTTCTTTCATCTGGATTTG | + |
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Preference number: 3 (lower is better) Translates to: VLSVLKYSFCSA*LFFNRFFHLDL Trigger: CAAATCCAGATGAAAGAAACGGTTGAAGAACAAGCAAGCACTACAGAAAGAGTATTTCAAGACAGACAGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATAGCTCCCAGATCCTaGAGCCCCCGGGTCCGCCGG | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQIAPRS*SPRVRR Trigger: CCGGCGGACCCGGGGGCTTCAGGATCTGGGAGCTAT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | GCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCACTGGAGTTTCCTGCCACTGAGGCCGTTTGCATGGTaGACTGAAGCCACAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: AFSTQCPKVDCHWSFLPLRPFAW*TEATEE Trigger: TTCTTCTGTGGCTTCAGTGCACCATGCAAACGGCCT...CAGTGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTGTGCTAAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR TCA 90 bp | CAGGCTAGTGACTGCAGTGTTCTTCTTAATTCTCCATCCTCTATCCCAGTAGCACATCAGTGGCAGATCTaGCCTCCTGAGCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: QASDCSVLLNSPSSIPVAHQWQI*PPEQQQ Trigger: CTGCTGCTGCTCAGGAGGTCAGATCTGCCACTGATG...TGCTACTGGGATAGAGGATGGAGAATTAAGAAGAACACTGCAGTCACTAGCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR GCA 90 bp | CAGGCTAGTGACTGCAGTGTTCTTCTTAATTCTCCATCCTCTATCCCAGTAGCAAGGTGGGCGGAGTGGTaGTGGTATTACCATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: QASDCSVLLNSPSSIPVARWAEW*WYYHQW Trigger: CCACTGATGGTAATACCAGCACCACTCCGCCCACCT...TGCTACTGGGATAGAGGATGGAGAATTAAGAAGAACACTGCAGTCACTAGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR GCA 90 bp | GCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCACTGGAGTTTCCTGCCACTGGTTTTAAGTTGTTGCTaGTGCTGCTGCTGTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: AFSTQCPKVDCHWSFLPLVLSCC*CCCCEV Trigger: AACCTCACAGCAGCAGCAGCAGCAACAACTTAAAAC...CAGTGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTGTGCTAAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR GCA 90 bp | GCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCACTGGAGTTTCCTGCCACTGCGTTACTACTGTTACTaGTGCTACTGCTGCTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: AFSTQCPKVDCHWSFLPLRYYCY*CYCCCL Trigger: TAAACAGCAGCAGTAGCAGCAGTAACAGTAGTAACG...CAGTGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTGTGCTAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCATCAGTGGCAGATCTaGCCTCCTGAGCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQHQWQI*PPEQQQ Trigger: CTGCTGCTGCTCAGGAGGTCAGATCTGCCACTGATG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATGCAGAAGGACGAGGTTaGAGGGGACGCCGAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHAEGRG*RGRRIS Trigger: AGAGATTCGGCGTCCCCTTCAACCTCGTCCTTCTGC...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR TCA 90 bp | GCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCACTGGAGTTTCCTGCCACTGAAGAACACTATCCAATaGATCCTCTCTGAACTGATG | + |
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Preference number: 4 (lower is better) Translates to: AFSTQCPKVDCHWSFLPLKNTIQ*ILSELM Trigger: CATCAGTTCAGAGAGGATTCATTGGATAGTGTTCTT...CAGTGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTGTGCTAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR TCA 90 bp | GTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTGCAGAAGGACGAGGTTaGAGGGGACGCCGAATCTCT | + |
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Preference number: 4 (lower is better) Translates to: VTIFNIFALRIFSQNSSFAEGRG*RGRRIS Trigger: AGAGATTCGGCGTCCCCTTCAACCTCGTCCTTCTGC...AAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR TCA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCACCCCGAACTCTACTaGAGAGCTGATACAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCHPELY*RADTGE Trigger: CTCTCCTGTATCAGCTCTTCAGTAGAGTTCGGGGTG...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAGGTGGGCGGAGTGGTaGTGGTATTACCATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHRWAEW*WYYHQW Trigger: CCACTGATGGTAATACCAGCACCACTCCGCCCACCT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAAGGTGGGCGGAGTGGTaGTGGTATTACCATCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRRWAEW*WYYHQW Trigger: CCACTGATGGTAATACCAGCACCACTCCGCCCACCT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATGGGCGGAGTGGTGCTaGTATTACCATCAGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRWAEWC*YYHQWQ Trigger: CTGCCACTGATGGTAATACCAGCACCACTCCGCCCA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTGGGCGGAGTGGTGCTaGTATTACCATCAGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQWAEWC*YYHQWQ Trigger: CTGCCACTGATGGTAATACCAGCACCACTCCGCCCA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACAGAGGTGGGCGGAGTaGTGCTGGTATTACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRQRWAE*CWYYHQ Trigger: CTGATGGTAATACCAGCACCACTCCGCCCACCTCTG...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCAGAGGTGGGCGGAGTaGTGCTGGTATTACCATCAG | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQQRWAE*CWYYHQ Trigger: CTGATGGTAATACCAGCACCACTCCGCCCACCTCTG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTCTTCTTGGCAGAGGTaGGCGGAGTGGTGCTGGTAT | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHSSWQR*AEWCWY Trigger: ATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGCCAGGCCGTTTGCATaGTGCACTGAAGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRARPFA*CTEATE Trigger: TTCTGTGGCTTCAGTGCACCATGCAAACGGCCTGGC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGCCAGGCCGTTTGCATaGTGCACTGAAGCCACAGAA | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQARPFA*CTEATE Trigger: TTCTGTGGCTTCAGTGCACCATGCAAACGGCCTGGC...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR TCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCATCAGTGGCAGATCTaGCCTCCTGAGCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTHQWQI*PPEQQQ Trigger: CTGCTGCTGCTCAGGAGGTCAGATCTGCCACTGATG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCACCCCGAACTCTACTaGAGAGCTGATACAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHHPELY*RADTGE Trigger: CTCTCCTGTATCAGCTCTTCAGTAGAGTTCGGGGTG...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCACCCCGAACTCTACTaGAGAGCTGATACAGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQHPELY*RADTGE Trigger: CTCTCCTGTATCAGCTCTTCAGTAGAGTTCGGGGTG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATGTTGCTGCTGCTGCTaGTGTGAGGTTGCAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRCCCCC*CEVAAV Trigger: AACTGCTGCAACCTCACAGCAGCAGCAGCAGCAACA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTGTTGCTGCTGCTGCTaGTGTGAGGTTGCAGCAGTT | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHCCCCC*CEVAAV Trigger: AACTGCTGCAACCTCACAGCAGCAGCAGCAGCAACA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAGTTGTTGCTGCTGCTaGTGCTGTGAGGTTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHSCCCC*CCEVAA Trigger: TGCTGCAACCTCACAGCAGCAGCAGCAGCAACAACT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAAGTTGTTGCTGCTGCTaGTGCTGTGAGGTTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRSCCCC*CCEVAA Trigger: TGCTGCAACCTCACAGCAGCAGCAGCAGCAACAACT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGCCACTGGAGTTTCCTaGCACTGTGCTTGCCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQATGVS*HCACLS Trigger: ACTTAGGCAAGCACAGTGGCAGGAAACTCCAGTGGC...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATGCCACTGGAGTTTCCTaGCACTGTGCTTGCCTAAGT | + |
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Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHATGVS*HCACLS Trigger: ACTTAGGCAAGCACAGTGGCAGGAAACTCCAGTGGC...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTGTCCCAAGGTTGACTaGCACTGGAGTTTCCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQCPKVD*HWSFLP Trigger: TGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CCA 90 bp | CGGTCAATGAGGGATTCTATTCTCTTCTTAAGATCAGCAGGTTTAACTGGAAATTGGGCGGAGTGGTGCTaGTATTACCATCAGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: RSMRDSILFLRSAGLTGNWAEWC*YYHQWQ Trigger: CTGCCACTGATGGTAATACCAGCACCACTCCGCCCA...ATTTCCAGTTAAACCTGCTGATCTTAAGAAGAGAATAGAATCCCTCATTGACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR CCA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTCTTCTTGGCAGAGGTaGGCGGAGTGGTGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FVTIFNIFALRIFSQNSSSSWQR*AEWCWY Trigger: ATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGA...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACGAATCTCTGGGTTGTaGAGGGGTGGAAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRRISGL*RGGRGR Trigger: TCTTCCTCTTCCACCCCTCCACAACCCAGAGATTCG...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | CGGTCAATGAGGGATTCTATTCTCTTCTTAAGATCAGCAGGTTTAACTGGAAATGCCAGGCCGTTTGCATaGTGCACTGAAGCCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSMRDSILFLRSAGLTGNARPFA*CTEATE Trigger: TTCTGTGGCTTCAGTGCACCATGCAAACGGCCTGGC...ATTTCCAGTTAAACCTGCTGATCTTAAGAAGAGAATAGAATCCCTCATTGACCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTGCTGTAAGAGAACCTaGACTCCACCCCGAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQCCKRT*TPPRTL Trigger: TAGAGTTCGGGGTGGAGTTCAGGTTCTCTTACAGCA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | CGGTCAATGAGGGATTCTATTCTCTTCTTAAGATCAGCAGGTTTAACTGGAAATTGTTGCTGCTGCTGCTaGTGTGAGGTTGCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSMRDSILFLRSAGLTGNCCCCC*CEVAAV Trigger: AACTGCTGCAACCTCACAGCAGCAGCAGCAGCAACA...ATTTCCAGTTAAACCTGCTGATCTTAAGAAGAGAATAGAATCCCTCATTGACCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCAGTTGTTGCTGCTGCTaGTGCTGTGAGGTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVTIFNIFALRIFSQNSSSCCCC*CCEVAA Trigger: TGCTGCAACCTCACAGCAGCAGCAGCAGCAACAACT...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGGCCGTTTGCATGGTaGACTGAAGCCACAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQRPFAW*TEATEE Trigger: TTCTTCTGTGGCTTCAGTGCACCATGCAAACGGCCT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTTCTTCTTGGCAGAGGTaGGCGGAGTGGTGCTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTSSWQR*AEWCWY Trigger: ATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGA...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTTAACTTTCTCTTCTTaGCAGAGGTGGGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHLTFSS*QRWAEW Trigger: CCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | CGGTCAATGAGGGATTCTATTCTCTTCTTAAGATCAGCAGGTTTAACTGGAAATCGAATCTCTGGGTTGTaGAGGGGTGGAAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSMRDSILFLRSAGLTGNRISGL*RGGRGR Trigger: TCTTCCTCTTCCACCCCTCCACAACCCAGAGATTCG...ATTTCCAGTTAAACCTGCTGATCTTAAGAAGAGAATAGAATCCCTCATTGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATTCTGTATAGGTACGTaGCTGGAAGTGGCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRFCIGT*LEVATG Trigger: TCCAGTGGCCACTTCCAGCCACGTACCTATACAGAA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | TTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTGCTGTAAGAGAACCTaGACTCCACCCCGAACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSSISLPLGFLARTLACCKRT*TPPRTL Trigger: TAGAGTTCGGGGTGGAGTTCAGGTTCTCTTACAGCA...AGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTTAAGTTGTTGCTGCTaGTGCTGCTGTGAGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQLSCCC*CCCEVA Trigger: TGCAACCTCACAGCAGCAGCAGCAGCAACAACTTAA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTTAAGTTGTTGCTGCTaGTGCTGCTGTGAGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHLSCCC*CCCEVA Trigger: TGCAACCTCACAGCAGCAGCAGCAGCAACAACTTAA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTTGTCCCAAGGTTGACTaGCACTGGAGTTTCCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTCPKVD*HWSFLP Trigger: TGGCAGGAAACTCCAGTGGCAGTCAACCTTGGGACA...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATTTAACTTTCTCTTCTTaGCAGAGGTGGGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSNGYSIMTSSKANILCNLTFSS*QRWAEW Trigger: CCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAA...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCGAATCTCTGGGTTGTaGAGGGGTGGAAGAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTRISGL*RGGRGR Trigger: TCTTCCTCTTCCACCCCTCCACAACCCAGAGATTCG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTCTGTATAGGTACGTaGCTGGAAGTGGCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FVTIFNIFALRIFSQNSSFCIGT*LEVATG Trigger: TCCAGTGGCCACTTCCAGCCACGTACCTATACAGAA...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAAAACCGGAAGTGCCTaGGCAGACACTTTTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHKTGSA*ADTFHS Trigger: GCTATGAAAAGTGTCTGCCCAGGCACTTCCGGTTTT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCACTCTACTGAAGAGCTaGTACAGGAGAGACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCTLLKS*YRRDKS Trigger: AGATTTGTCTCTCCTGTATCAGCTCTTCAGTAGAGT...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTGTAGTCCCGGTCAATaGGGGATTCTATTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHCSPGQ*GILFSS Trigger: AGAAGAGAATAGAATCCCTCATTGACCGGGACTACA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATGTAGTCCCGGTCAATaGGGGATTCTATTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRCSPGQ*GILFSS Trigger: AGAAGAGAATAGAATCCCTCATTGACCGGGACTACA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | TCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTGTTAAGTTGTTGCTGCTaGTGCTGCTGTGAGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSSISLPLGFLARTLALLSCCC*CCCEVA Trigger: TGCAACCTCACAGCAGCAGCAGCAGCAACAACTTAA...CAAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTAGGCCGTTTGCATGGTaGACTGAAGCCACAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTRPFAW*TEATEE Trigger: TTCTTCTGTGGCTTCAGTGCACCATGCAAACGGCCT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCTACTGATGCACTCTTaGCAACTAATAGGCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQLLMHS*QLIGVW Trigger: CCAAACGCCTATTAGTTGGCAAGAGTGCATCAGTAG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAAGAAAAACCGGAAGTaGCTGGGCAGACACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHKKNRK*LGRHFS Trigger: TGAAAAGTGTCTGCCCAGGCACTTCCGGTTTTTCTT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTTTAACTTTCTCTTCTTaGCAGAGGTGGGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTLTFSS*QRWAEW Trigger: CCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAA...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTTTCTGTATAGGTACGTaGCTGGAAGTGGCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTFCIGT*LEVATG Trigger: TCCAGTGGCCACTTCCAGCCACGTACCTATACAGAA...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCATCATTTGCCTACAGTaGTTTTGCCAGCATCTATCG | + |
|
Preference number: 4 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCIICLQ*FCQHLS Trigger: CGATAGATGCTGGCAAAACCACTGTAGGCAAATGAT...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCATAGGCACATATGTTaGCCAGTAACCCATTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHHRHIC*PVTHCQ Trigger: CTGACAATGGGTTACTGGCCAACATATGTGCCTATG...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAATCTCTGGCGGCAAATaGACTTCCATAGGCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRISGGK*TSIGTY Trigger: ATATGTGCCTATGGAAGTCCATTTGCCGCCAGAGAT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATCTGTGCTTTGATGTaGTCTTCACATATCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQICALM*SSHICL Trigger: GAGGCAGATATGTGAAGATCACATCAAAGCACAGAT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATACTCTACTGAAGAGCTaGTACAGGAGAGACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHTLLKS*YRRDKS Trigger: AGATTTGTCTCTCCTGTATCAGCTCTTCAGTAGAGT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACTCTACTGAAGAGCTaGTACAGGAGAGACAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQTLLKS*YRRDKS Trigger: AGATTTGTCTCTCCTGTATCAGCTCTTCAGTAGAGT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGCCTGCACGAAGTTTTaGATCCACATACTTAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRACTKF*IHILSY Trigger: ATAGCTAAGTATGTGGATTCAAAACTTCGTGCAGGC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGTCTTGAAAATTTCCTaGAGCTTTACCATCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQVLKIS*SFTISG Trigger: GCCAGAGATGGTAAAGCTTCAGGAAATTTTCAAGAC...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCTACTGCTGCTACTGCTaGTGTTTAACTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCYCCYC*CLTFSS Trigger: AGAAGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTA...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCTGTTACTGCTGCTACTaGTGCTGTTTAACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCCYCCY*CCLTFS Trigger: AGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTAACA...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCGTTACTACTGTTACTaGTGCTACTGCTGCTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQRYYCY*CYCCCL Trigger: TAAACAGCAGCAGTAGCAGCAGTAACAGTAGTAACG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTTAGTTTTAAGTTGTTaGTGCTGCTGCTGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQLVLSC*CCCCCE Trigger: CTCACAGCAGCAGCAGCAGCAACAACTTAAAACTAA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATTAGTTTTAAGTTGTTaGTGCTGCTGCTGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRLVLSC*CCCCCE Trigger: CTCACAGCAGCAGCAGCAGCAACAACTTAAAACTAA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCTGATCATTATCATTTaGCTACAGTGGTTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCLIIII*LQWFCQ Trigger: CTGGCAAAACCACTGTAGGCAAATGATAATGATCAG...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATGGAAGAGGAAGAGGTaGAATCAAAGTCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRWKRKR*NQSLLS Trigger: AGAGAGAAGACTTTGATTCCACCTCTTCCTCTTCCA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTGGAAGAGGAAGAGGTaGAATCAAAGTCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQWKRKR*NQSLLS Trigger: AGAGAGAAGACTTTGATTCCACCTCTTCCTCTTCCA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATATCATTTGCCTACAGTaGTTTTGCCAGCATCTATCG | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHIICLQ*FCQHLS Trigger: CGATAGATGCTGGCAAAACCACTGTAGGCAAATGAT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAATCCCATGTCCCAAATaGAGGGTAGCATTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRIPCPK*RVALNS Trigger: AGAATTCAATGCTACCCTCCATTTGGGACATGGGAT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATATTGAAGTACTATTCTaGATGGCTTCCACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHIEVLF*MASTAS Trigger: AGAAGCAGTGGAAGCCATTCAGAATAGTACTTCAAT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATATCTGTGCTTTGATGTaGTCTTCACATATCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSNGYSIMTSSKANILCNICALM*SSHICL Trigger: GAGGCAGATATGTGAAGATCACATCAAAGCACAGAT...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAAGAACACTATCCAATaGATCCTCTCTGAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHKNTIQ*ILSELM Trigger: CATCAGTTCAGAGAGGATTCATTGGATAGTGTTCTT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAAAGAACACTATCCAATaGATCCTCTCTGAACTGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRKNTIQ*ILSELM Trigger: CATCAGTTCAGAGAGGATTCATTGGATAGTGTTCTT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAGGAGAGACAAATCTTaGATTCGGTTTTCATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHRRDKS*IRFSSR Trigger: CCTTGATGAAAACCGAATTCAAGATTTGTCTCTCCT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGGAGAGACAAATCTTaGATTCGGTTTTCATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQRRDKS*IRFSSR Trigger: CCTTGATGAAAACCGAATTCAAGATTTGTCTCTCCT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTGGTACTGTCTGTCTTaGAATACTCTTTCTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQWYCLS*NTLSVV Trigger: CACTACAGAAAGAGTATTTCAAGACAGACAGTACCA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCTGATTGTAGACTTCTaGAACAAGAAGATTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHLIVDF*NKKIVA Trigger: AGCCACAATCTTCTTGTTTCAGAAGTCTACAATCAG...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTACTGCTGCTACTGCTaGTGTTTAACTTTCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHYCCYC*CLTFSS Trigger: AGAAGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTGTTACTGCTGCTACTaGTGCTGTTTAACTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHCYCCY*CCLTFS Trigger: AGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTAACA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATACTACTGTTACTGCTaGTACTGCTGCTGTTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRYYCYC*YCCCLT Trigger: AGTTAAACAGCAGCAGTAGCAGCAGTAACAGTAGTA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGTTTTAAGTTGTTGCTaGTGCTGCTGCTGTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTVLSCC*CCCCEV Trigger: AACCTCACAGCAGCAGCAGCAGCAACAACTTAAAAC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | GTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTTTAGTTTTAAGTTGTTaGTGCTGCTGCTGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTIFNIFALRIFSQNSSFLVLSC*CCCCCE Trigger: CTCACAGCAGCAGCAGCAGCAACAACTTAAAACTAA...AAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCTGATCATTATCATTTaGCTACAGTGGTTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQLIIII*LQWFCQ Trigger: CTGGCAAAACCACTGTAGGCAAATGATAATGATCAG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACTGATCATTATCATTTaGCTACAGTGGTTTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRLIIII*LQWFCQ Trigger: CTGGCAAAACCACTGTAGGCAAATGATAATGATCAG...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCTACTGATGCACTCTTaGCAACTAATAGGCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTLLMHS*QLIGVW Trigger: CCAAACGCCTATTAGTTGGCAAGAGTGCATCAGTAG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTCTATCCCAGTAGCATaGTTGATCTCTTCTAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQSIPVA*LISSKL Trigger: CAGTTTAGAAGAGATCAAGCATGCTACTGGGATAGA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTCTTTCTGTAGTGCTTaGTTGTTCTTCAACCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQSFCSA*LFFNRF Trigger: GAAACGGTTGAAGAACAAGCAAGCACTACAGAAAGA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATCTTTCTGTAGTGCTTaGTTGTTCTTCAACCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRSFCSA*LFFNRF Trigger: GAAACGGTTGAAGAACAAGCAAGCACTACAGAAAGA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATTGGAAGAGGAAGAGGTaGAATCAAAGTCTTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSNGYSIMTSSKANILCNWKRKR*NQSLLS Trigger: AGAGAGAAGACTTTGATTCCACCTCTTCCTCTTCCA...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCATCCCATGTCCCAAATaGAGGGTAGCATTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVTIFNIFALRIFSQNSSIPCPK*RVALNS Trigger: AGAATTCAATGCTACCCTCCATTTGGGACATGGGAT...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTATCTCTGGCGGCAAATaGACTTCCATAGGCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTISGGK*TSIGTY Trigger: ATATGTGCCTATGGAAGTCCATTTGCCGCCAGAGAT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACATTAGCAGCACCATaGTTTGAAAAAGAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQTLAAP*FEKERP Trigger: AGGTCTCTCTTTTTCAAACCATGGTGCTGCTAATGT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | AGCATCAATTTGGTACTGTCTGTCTTGAAATACTCTTTCTGTAGTGCTTGCTTGATTGAAGTACTATTCTaGATGGCTTCCACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SINLVLSVLKYSFCSACLIEVLF*MASTAS Trigger: AGAAGCAGTGGAAGCCATTCAGAATAGTACTTCAAT...CAAGCAAGCACTACAGAAAGAGTATTTCAAGACAGACAGTACCAAATTGATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTATCTGTGCTTTGATGTaGTCTTCACATATCTGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTICALM*SSHICL Trigger: GAGGCAGATATGTGAAGATCACATCAAAGCACAGAT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATGATGAATCTGTGCTTTaGTGTGATCTTCACATATCT | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHDESVL*CDLHIS Trigger: AGATATGTGAAGATCACATCAAAGCACAGATTCATC...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | GTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTAGGAGAGACAAATCTTaGATTCGGTTTTCATCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTIFNIFALRIFSQNSSFRRDKS*IRFSSR Trigger: CCTTGATGAAAACCGAATTCAAGATTTGTCTCTCCT...AAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCCTGCACGAAGTTTTaGATCCACATACTTAGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTACTKF*IHILSY Trigger: ATAGCTAAGTATGTGGATTCAAAACTTCGTGCAGGC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGTCTTGAAAATTTCCTaGAGCTTTACCATCTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTVLKIS*SFTISG Trigger: GCCAGAGATGGTAAAGCTTCAGGAAATTTTCAAGAC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | TCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTGTACTACTGTTACTGCTaGTACTGCTGCTGTTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: SPSSISLPLGFLARTLALYYCYC*YCCCLT Trigger: AGTTAAACAGCAGCAGTAGCAGCAGTAACAGTAGTA...CAAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCGTTACTACTGTTACTaGTGCTACTGCTGCTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTRYYCY*CYCCCL Trigger: TAAACAGCAGCAGTAGCAGCAGTAACAGTAGTAACG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCATATCTGCCTCAGCTaGTTATACAAATTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHHICLS*LYKFAE Trigger: TTCTGCAAATTTGTATAAGCAGCTGAGGCAGATATG...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCATATCTGCCTCAGCTaGTTATACAAATTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQHICLS*LYKFAE Trigger: TTCTGCAAATTTGTATAAGCAGCTGAGGCAGATATG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGAACTGATGAATCTGTaGTTTGATGTGATCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LRKVHTTIPITLLHLVIRELMNL*FDVIFT Trigger: TGTGAAGATCACATCAAAGCACAGATTCATCAGTTC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTATCATTTGCCTACAGTaGTTTTGCCAGCATCTATCG | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTIICLQ*FCQHLS Trigger: CGATAGATGCTGGCAAAACCACTGTAGGCAAATGAT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTATCCCATGTCCCAAATaGAGGGTAGCATTGAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTIPCPK*RVALNS Trigger: AGAATTCAATGCTACCCTCCATTTGGGACATGGGAT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | CGGTCAATGAGGGATTCTATTCTCTTCTTAAGATCAGCAGGTTTAACTGGAAATGATGAATCTGTGCTTTaGTGTGATCTTCACATATCT | + |
|
Preference number: 4 (lower is better) Translates to: RSMRDSILFLRSAGLTGNDESVL*CDLHIS Trigger: AGATATGTGAAGATCACATCAAAGCACAGATTCATC...ATTTCCAGTTAAACCTGCTGATCTTAAGAAGAGAATAGAATCCCTCATTGACCG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCTGATTGTAGACTTCTaGAACAAGAAGATTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTLIVDF*NKKIVA Trigger: AGCCACAATCTTCTTGTTTCAGAAGTCTACAATCAG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCCATATCTGCCTCAGCTaGTTATACAAATTTGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVTIFNIFALRIFSQNSSHICLS*LYKFAE Trigger: TTCTGCAAATTTGTATAAGCAGCTGAGGCAGATATG...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR GCA 90 bp | TCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTGGAACTGATGAATCTGTaGTTTGATGTGATCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPSSISLPLGFLARTLALELMNL*FDVIFT Trigger: TGTGAAGATCACATCAAAGCACAGATTCATCAGTTC...CAAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAAGTACTATTCTGAATaGCTTCCACTGCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQKYYSE*LPLLLL Trigger: TAAAAGAAGCAGTGGAAGCCATTCAGAATAGTACTT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATAAGTACTATTCTGAATaGCTTCCACTGCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TTEKSPHNYSHYTASFGHKYYSE*LPLLLL Trigger: TAAAAGAAGCAGTGGAAGCCATTCAGAATAGTACTT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGCTATCAGTTCAGCTaGCTTATTTGGTCTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: TEKSPHNYSHYTASFGHQSYQFS*LIWSFI Trigger: AATAAAAGACCAAATAAGCCAGCTGAACTGATAGCT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTACATTAGCAGCACCATaGTTTGAAAAAGAGAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTTLAAP*FEKERP Trigger: AGGTCTCTCTTTTTCAAACCATGGTGCTGCTAATGT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGATGAATCTGTGCTTTaGTGTGATCTTCACATATCT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTDESVL*CDLHIS Trigger: AGATATGTGAAGATCACATCAAAGCACAGATTCATC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR GCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGAACTGATGAATCTGTaGTTTGATGTGATCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTELMNL*FDVIFT Trigger: TGTGAAGATCACATCAAAGCACAGATTCATCAGTTC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTATCTCTTTCCATGTAGTCCCGGTCAATGAGGGATTCTATTCTCTTCTTAAGTACTATTCTGAATaGCTTCCACTGCTTCTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FFISFHVVPVNEGFYSLLKYYSE*LPLLLL Trigger: TAAAAGAAGCAGTGGAAGCCATTCAGAATAGTACTT...AAGAAGAGAATAGAATCCCTCATTGACCGGGACTACATGGAAAGAGATAAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CCA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTAGCTATCAGTTCAGCTaGCTTATTTGGTCTTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTSYQFS*LIWSFI Trigger: AATAAAAGACCAAATAAGCCAGCTGAACTGATAGCT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS CCA 90 bp | AGGGAGGGCGGGGCGGACCTTGGCGACACCTTCGGCGCTCTTGATTaGAGGTTTCCGAACTGTTATCTTCTGAGTCGGTGTCATTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: REGGADLGDTFGALD*RFPNCYLLSRCHSL Trigger: GAGAGAATGACACCGACTCAGAAGATAACAGTTCGGAAACCTCCAATCAAGAGCGCCGAAGGTGTCGCCAAGGTCCGCCCCGCCCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050083.6 ENSMUST00000115118.8 |
||
| CDS CCA 90 bp | GGGACGCCGAATCTCTGGGTTGTGGAGGGGTGGAAGAGGAAGAGGTaGAATCAAAGTCTTCTCTCTCGTTACTACTGTTACTGCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: GTPNLWVVEGWKRKR*NQSLLSRYYCYCCY Trigger: GTAGCAGCAGTAACAGTAGTAACGAGAGAGAAGACTTTGATTCCACCTCTTCCTCTTCCACCCCTCCACAACCCAGAGATTCGGCGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | TTTTTGCCCTCTTTAAATTCAGCTTTTAGCACACAGTGTCCCAAGGTTGACTGCCGCCGAATCTCTGGGTaGTGGAGGGGTGGAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FLPSLNSAFSTQCPKVDCRRISG*WRGGRG Trigger: TCCTCTTCCACCCCTCCACAACCCAGAGATTCGGCG...GCAGTCAACCTTGGGACACTGTGTGCTAAAAGCTGAATTTAAAGAGGGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCGCCGAATCTCTGGGTaGTGGAGGGGTGGAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTEKSPHNYSHYTASFGHRRISG*WRGGRG Trigger: TCCTCTTCCACCCCTCCACAACCCAGAGATTCGGCG...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGGCAGAAGGACGAGGTaGAAGGGGACGCCGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQGRRTR*KGTPNL Trigger: GAGATTCGGCGTCCCCTTCAACCTCGTCCTTCTGCC...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCATCCTCTATCCCAGTAGCATGCTTGATCTCTTCTAAACTGAATTCTTCTGGCAGAAGGACGAGGTaGAAGGGGACGCCGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSSIPVACLISSKLNSSGRRTR*KGTPNL Trigger: GAGATTCGGCGTCCCCTTCAACCTCGTCCTTCTGCC...AGAAGAATTCAGTTTAGAAGAGATCAAGCATGCTACTGGGATAGAGGATGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGCTGCTGCTGTGAGGTaGCAGCAGTTGGCGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRAAAVR*QQLAKM Trigger: CATCTTCGCCAACTGCTGCAACCTCACAGCAGCAGC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS GCA 90 bp | AAGAGGTGGAATCAAAGTCTTCTCTCTCGTTACTACTGTTACTGCTaGTACTGCTGCTGTTTAACTTTCTCTTCTTGGCAGAGGTGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KRWNQSLLSRYYCYC*YCCCLTFSSWQRWA Trigger: CGCCCACCTCTGCCAAGAAGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTAACAGTAGTAACGAGAGAGAAGACTTTGATTCCACCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCGCCGAATCTCTGGGTaGTGGAGGGGTGGAAGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTRRISG*WRGGRG Trigger: TCCTCTTCCACCCCTCCACAACCCAGAGATTCGGCG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGGCAGAAGGACGAGGTaGAAGGGGACGCCGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTGRRTR*KGTPNL Trigger: GAGATTCGGCGTCCCCTTCAACCTCGTCCTTCTGCC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | AGCATCAATTTGGTACTGTCTGTCTTGAAATACTCTTTCTGTAGTGCTTGCTTGGCTGCTGCTGTGAGGTaGCAGCAGTTGGCGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SINLVLSVLKYSFCSACLAAAVR*QQLAKM Trigger: CATCTTCGCCAACTGCTGCAACCTCACAGCAGCAGC...CAAGCAAGCACTACAGAAAGAGTATTTCAAGACAGACAGTACCAAATTGATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGCACAGTGTCCCAAGGTaGACTGCCACTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQHSVPR*TATGVS Trigger: GGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTG...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACACAGTGTCCCAAGGTaGACTGCCACTGGAGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRHSVPR*TATGVS Trigger: GGAAACTCCAGTGGCAGTCAACCTTGGGACACTGTG...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS GCA 90 bp | AGGAAGAGGTGGAATCAAAGTCTTCTCTCTCGTTACTACTGTTACTaGTGCTACTGCTGCTGTTTAACTTTCTCTTCTTGGCAGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RKRWNQSLLSRYYCY*CYCCCLTFSSWQRW Trigger: CCACCTCTGCCAAGAAGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTAACAGTAGTAACGAGAGAGAAGACTTTGATTCCACCTCTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTGCTGCTGTGAGGTaGCAGCAGTTGGCGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTAAAVR*QQLAKM Trigger: CATCTTCGCCAACTGCTGCAACCTCACAGCAGCAGC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGATTAGCTGAGCCGGGCTaGCTGTTAGCAAAGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRLAEPG*LLAKLE Trigger: CTCTAGCTTTGCTAACAGCAAGCCCGGCTCAGCTAA...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS TCA 90 bp | CAATCCACTGCTGTAAGAGAACCTGAACTCCACCCCGAACTCTACTaGAGAGCTGATACAGGAGAGACAAATCTTGAATTCGGTTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QSTAVREPELHPELY*RADTGETNLEFGFH Trigger: ATGAAAACCGAATTCAAGATTTGTCTCTCCTGTATCAGCTCTTCAGTAGAGTTCGGGGTGGAGTTCAGGTTCTCTTACAGCAGTGGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGAAGCAGCAGAGGGATaGGGGGAAGAAAAACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIREAAEG*GEEKPV Trigger: AACAGGTTTTTCTTCCCCCAATCCCTCTGCTGCTTC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000016681.15 |
||
| CDS-3UTR CAA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTTTAACTTTCTCTTCTaGGCAGAGGTGGGCGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TTEKSPHNYSHYTASFGHFNFLF*AEVGGV Trigger: CACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTAGCTGAGCCGGGCTaGCTGTTAGCAAAGCTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSPSSISLPLGFLARTLALAEPG*LLAKLE Trigger: CTCTAGCTTTGCTAACAGCAAGCCCGGCTCAGCTAA...AGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS GCA 90 bp | GAAGCCACAGAAGAAATTAATATACTCTTAGTTTTAAGTTGTTGCTaGTGCTGCTGCTGTGAGGTTGCAGCAGTTGGCGAAGATGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EATEEINILLVLSCC*CCCCEVAAVGEDEE Trigger: TTCCTCATCTTCGCCAACTGCTGCAACCTCACAGCAGCAGCAGCAGCAACAACTTAAAACTAAGAGTATATTAATTTCTTCTGTGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS GCA 90 bp | ACTGAAGCCACAGAAGAAATTAATATACTCTTAGTTTTAAGTTGTTaGTGCTGCTGCTGCTGTGAGGTTGCAGCAGTTGGCGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: TEATEEINILLVLSC*CCCCCEVAAVGEDE Trigger: CTCATCTTCGCCAACTGCTGCAACCTCACAGCAGCAGCAGCAGCAACAACTTAAAACTAAGAGTATATTAATTTCTTCTGTGGCTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS CCA 90 bp | GCAAAGCTAGAGACCGCGGTAGAAGATTTAGCCAGGCCGTTTGCATaGTGCACTGAAGCCACAGAAGAAATTAATATACTCTTAGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AKLETAVEDLARPFA*CTEATEEINILLVL Trigger: TAAAACTAAGAGTATATTAATTTCTTCTGTGGCTTCAGTGCACCATGCAAACGGCCTGGCTAAATCTTCTACCGCGGTCTCTAGCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | TCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTGGAAGCAGCAGAGGGATaGGGGGAAGAAAAACCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SPSSISLPLGFLARTLALEAAEG*GEEKPV Trigger: AACAGGTTTTTCTTCCCCCAATCCCTCTGCTGCTTC...CAAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTTAACTTTCTCTTCTaGGCAGAGGTGGGCGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPSSISLPLGFLARTLAFNFLF*AEVGGV Trigger: CACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAA...AGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAAACATTCCTTCAAGCTaGCTGGTAAAAGCGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRNIPSS*LVKAAP Trigger: TGGAGCCGCTTTTACCAGCAAGCTTGAAGGAATGTT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAACATTCCTTCAAGCTaGCTGGTAAAAGCGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQNIPSS*LVKAAP Trigger: TGGAGCCGCTTTTACCAGCAAGCTTGAAGGAATGTT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGAAGCAGCAGAGGGATaGGGGGAAGAAAAACCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTEAAEG*GEEKPE Trigger: TTCCGGTTTTTCTTCCCCCAATCCCTCTGCTGCTTC...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000115118.8 |
||
| CDS GCA 90 bp | AAGCTAGAGACCGCGGTAGAAGATTTAGCCAGGCCGTTTGCATGGTaGACTGAAGCCACAGAAGAAATTAATATACTCTTAGTTTTAAGT | + |
|
Preference number: 5 (lower is better) Translates to: KLETAVEDLARPFAW*TEATEEINILLVLS Trigger: ACTTAAAACTAAGAGTATATTAATTTCTTCTGTGGCTTCAGTGCACCATGCAAACGGCCTGGCTAAATCTTCTACCGCGGTCTCTAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTTTTAACTTTCTCTTCTaGGCAGAGGTGGGCGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTFNFLF*AEVGGV Trigger: CACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAA...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGACTCTTAGTTTTAAGTaGTTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQTLSFK*LLLLLL Trigger: CAGCAGCAGCAGCAGCAACAACTTAAAACTAAGAGT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | CGGTCAATGAGGGATTCTATTCTCTTCTTAAGATCAGCAGGTTTAACTGGAAATACTCTTAGTTTTAAGTaGTTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSMRDSILFLRSAGLTGNTLSFK*LLLLLL Trigger: CAGCAGCAGCAGCAGCAACAACTTAAAACTAAGAGT...ATTTCCAGTTAAACCTGCTGATCTTAAGAAGAGAATAGAATCCCTCATTGACCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGTAAACTTCTATCAATaGCTTCACCATTCCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRVNFYQ*LHHSAL Trigger: GAGAGCGGAATGGTGAAGCAATTGATAGAAGTTTAC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGTAAACTTCTATCAATaGCTTCACCATTCCGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQVNFYQ*LHHSAL Trigger: GAGAGCGGAATGGTGAAGCAATTGATAGAAGTTTAC...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGATCGCAGCATCAATTaGGTACTGTCTGTCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQDRSIN*VLSVLK Trigger: TTTCAAGACAGACAGTACCAAATTGATGCTGCGATC...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAGATCGCAGCATCAATTaGGTACTGTCTGTCTTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRDRSIN*VLSVLK Trigger: TTTCAAGACAGACAGTACCAAATTGATGCTGCGATC...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
||
| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTACTCTTAGTTTTAAGTaGTTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTTLSFK*LLLLLL Trigger: CAGCAGCAGCAGCAGCAACAACTTAAAACTAAGAGT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | TTATCCAATGGCTACAGCATTATGACAAGTTCCAAGGCCAACATTCTATGCAATGTAAACTTCTATCAATaGCTTCACCATTCCGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LSNGYSIMTSSKANILCNVNFYQ*LHHSAL Trigger: GAGAGCGGAATGGTGAAGCAATTGATAGAAGTTTAC...ATTGCATAGAATGTTGGCCTTGGAACTTGTCATAATGCTGTAGCCATTGGATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR CAA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGGAGAGACAAATCTaGAATTCGGTTTTCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: TTEKSPHNYSHYTASFGHQERQI*NSVFIK Trigger: CTTGATGAAAACCGAATTCAAGATTTGTCTCTCCTG...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATATCCCAGTAGCATGCTaGATCTCTTCTAAACTGAAT | + |
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Preference number: 5 (lower is better) Translates to: TTEKSPHNYSHYTASFGHIPVAC*ISSKLN Trigger: ATTCAGTTTAGAAGAGATCAAGCATGCTACTGGGAT...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTTCTGTAGTGCTTGCTaGTTCTTCAACCGTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TTEKSPHNYSHYTASFGHFCSAC*FFNRFF Trigger: AAAGAAACGGTTGAAGAACAAGCAAGCACTACAGAA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTTCTGTAGTGCTTGCTaGTTCTTCAACCGTTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQFCSAC*FFNRFF Trigger: AAAGAAACGGTTGAAGAACAAGCAAGCACTACAGAA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | ACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATTGCCATCAATCGTTTTaGTCTGTACTTTTTGATCAC | + |
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Preference number: 5 (lower is better) Translates to: TTEKSPHNYSHYTASFGHCHQSF*SVLFDH Trigger: GTGATCAAAAAGTACAGACAAAAACGATTGATGGCA...ATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAACCTTTTTGAAGAATaGCCGTTAAGTGTTCACCTA | + |
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Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQNLFEE*PLSVHL Trigger: TAGGTGAACACTTAACGGCAATTCTTCAAAAAGGTT...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | TTTGTCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCCAGGAGAGACAAATCTaGAATTCGGTTTTCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: FVTIFNIFALRIFSQNSSQERQI*NSVFIK Trigger: CTTGATGAAAACCGAATTCAAGATTTGTCTCTCCTG...GCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGACAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR CAA 90 bp | CTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGAACAGTTAATTCAATATaGCCAGGTACATTCTGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LRKVHTTIPITLLHLVIRTVNSI*PGTFWF Trigger: GAACCAGAATGTACCTGGCAATATTGAATTAACTGT...TCTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | ACTGAGAAAAGTCCACACAACTATTCCCATTACACTGCTTCATTTGGTCATCAGTCTGAAACAAGAAGATaGTGGCTAAGTGTTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: TEKSPHNYSHYTASFGHQSETRR*WLSVFL Trigger: GAGAAAAACACTTAGCCACAATCTTCTTGTTTCAGA...CTGATGACCAAATGAAGCAGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | TTCTTTATCTCTTTCCATGTAGTCCCGGTCAATGAGGGATTCTATTCTCTTCTTTGCCATCAATCGTTTTaGTCTGTACTTTTTGATCAC | + |
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Preference number: 5 (lower is better) Translates to: FFISFHVVPVNEGFYSLLCHQSF*SVLFDH Trigger: GTGATCAAAAAGTACAGACAAAAACGATTGATGGCA...AAGAAGAGAATAGAATCCCTCATTGACCGGGACTACATGGAAAGAGATAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR CAA 90 bp | TCACCATCTTCAATATCTTTGCCCTTAGGATTTTTAGCCAGAACTCTAGCTTTGAACCTTTTTGAAGAATaGCCGTTAAGTGTTCACCTA | + |
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Preference number: 5 (lower is better) Translates to: SPSSISLPLGFLARTLALNLFEE*PLSVHL Trigger: TAGGTGAACACTTAACGGCAATTCTTCAAAAAGGTT...CAAAGCTAGAGTTCTGGCTAAAAATCCTAAGGGCAAAGATATTGAAGATGGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000147129.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTCAGGAGAGACAAATCTaGAATTCGGTTTTCATCAAG | + |
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Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTQERQI*NSVFIK Trigger: CTTGATGAAAACCGAATTCAAGATTTGTCTCTCCTG...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTATCCCAGTAGCATGCTaGATCTCTTCTAAACTGAAT | + |
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Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTIPVAC*ISSKLN Trigger: ATTCAGTTTAGAAGAGATCAAGCATGCTACTGGGAT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTAACCTTTTTGAAGAATaGCCGTTAAGTGTTCACCTA | + |
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Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTNLFEE*PLSVHL Trigger: TAGGTGAACACTTAACGGCAATTCTTCAAAAAGGTT...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS-3UTR CAA 90 bp | AAAATGGGTATGTTAACCACTGAGAAAAGTCCACACAACTATTCCCATTACACTTCTGAAACAAGAAGATaGTGGCTAAGTGTTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: KMGMLTTEKSPHNYSHYTSETRR*WLSVFL Trigger: GAGAAAAACACTTAGCCACAATCTTCTTGTTTCAGA...AGTGTAATGGGAATAGTTGTGTGGACTTTTCTCAGTGGTTAACATACCCATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016681.15 ENSMUST00000115118.8 |
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| CDS TCA 72 bp | GGGCGGGGCGGACCTTGGCGACACCTTCGGCGCTCTTaGTTGGAGGTTTCCGAACTGTTATCTTCTGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: GRGGPWRHLRRS*LEVSELLSSES Trigger: CGACTCAGAAGATAACAGTTCGGAAACCTCCAATCAAGAGCGCCGAAGGTGTCGCCAAGGTCCGCCCCGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050083.6 ENSMUST00000115118.8 |
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| CDS CCA 72 bp | GGGGCGGACCTTGGCGACACCTTCGGCGCTCTTGATTaGAGGTTTCCGAACTGTTATCTTCTGAGTCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: GADLGDTFGALD*RFPNCYLLSRC Trigger: ACACCGACTCAGAAGATAACAGTTCGGAAACCTCCAATCAAGAGCGCCGAAGGTGTCGCCAAGGTCCGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050083.6 ENSMUST00000115118.8 |
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| CDS CCA 72 bp | GTGTCTTCAAACCGCAGCTTCTTCTGTATAGGTACGTaGCTGGAAGTGGCCACTGGAACCCCAAGGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VSSNRSFFCIGT*LEVATGTPRQK Trigger: CTTCTGCCTTGGGGTTCCAGTGGCCACTTCCAGCCACGTACCTATACAGAAGAAGCTGCGGTTTGAAGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS CCA 72 bp | TACTGCTGCTGTTTAACTTTCTCTTCTTGGCAGAGGTaGGCGGAGTGGTGCTGGTATTACCATCAGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: YCCCLTFSSWQR*AEWCWYYHQWQ Trigger: CTGCCACTGATGGTAATACCAGCACCACTCCGCCCACCTCTGCCAAGAAGAGAAAGTTAAACAGCAGCAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS CCA 72 bp | AATCTCTGGGTTGTGGAGGGGTGGAAGAGGAAGAGGTaGAATCAAAGTCTTCTCTCTCGTTACTACTGTTAC | + |
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Preference number: 6 (lower is better) Translates to: NLWVVEGWKRKR*NQSLLSRYYCY Trigger: GTAACAGTAGTAACGAGAGAGAAGACTTTGATTCCACCTCTTCCTCTTCCACCCCTCCACAACCCAGAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS CAA 72 bp | AAGTTCTTGATCACTAACTTCTTAGCTGAGCCGGGCTaGCTGTTAGCAAAGCTAGAGACCGCGGTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: KFLITNFLAEPG*LLAKLETAVED Trigger: ATCTTCTACCGCGGTCTCTAGCTTTGCTAACAGCAAGCCCGGCTCAGCTAAGAAGTTAGTGATCAAGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS CAA 90 bp | TTATCTTTAAAGTTCTTGATCACTAACTTCTTAGCTGAGCCGGGCTaGCTGTTAGCAAAGCTAGAGACCGCGGTAGAAGATTTAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: LSLKFLITNFLAEPG*LLAKLETAVEDLAR Trigger: CCTGGCTAAATCTTCTACCGCGGTCTCTAGCTTTGCTAACAGCAAGCCCGGCTCAGCTAAGAAGTTAGTGATCAAGAACTTTAAAGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS TCA 72 bp | GCGCTCTTGATTGGAGGTTTCCGAACTGTTATCTTCTaGGTCGGTGTCATTCTCTCTTCTTTCTTTAGACCT | + |
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Preference number: 6 (lower is better) Translates to: ALLIGGFRTVIF*VGVILSSFFRP Trigger: AGGTCTAAAGAAAGAAGAGAGAATGACACCGACTCAGAAGATAACAGTTCGGAAACCTCCAATCAAGAGCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050083.6 ENSMUST00000115118.8 |
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| CDS GCA 72 bp | AATCAAAGTCTTCTCTCTCGTTACTACTGTTACTGCTaGTACTGCTGCTGTTTAACTTTCTCTTCTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: NQSLLSRYYCYC*YCCCLTFSSWQ Trigger: CTGCCAAGAAGAGAAAGTTAAACAGCAGCAGTAGCAGCAGTAACAGTAGTAACGAGAGAGAAGACTTTGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS GCA 72 bp | CTTCACCATTCCGCTCTCTCTCAATCAAGAGAAGGATaGCATCAATCGTTTTTGTCTGTACTTTTTGATCAC | + |
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Preference number: 6 (lower is better) Translates to: LHHSALSQSREG*HQSFLSVLFDH Trigger: GTGATCAAAAAGTACAGACAAAAACGATTGATGGCATCCTTCTCTTGATTGAGAGAGAGCGGAATGGTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS CAA 72 bp | GCATACTTAAAAGGCTTCGAAGTAAACTTCTATCAATaGCTTCACCATTCCGCTCTCTCTCAATCAAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: AYLKGFEVNFYQ*LHHSALSQSRE Trigger: TTCTCTTGATTGAGAGAGAGCGGAATGGTGAAGCAATTGATAGAAGTTTACTTCGAAGCCTTTTAAGTATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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| CDS CAA 72 bp | CTTCTGACCTTCGGCTGCGTAAAGCCGATTAGTTTCTaGCAAAAATTGCTGTTCAAAAGAATCTTGGTAAAT | + |
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Preference number: 6 (lower is better) Translates to: LLTFGCVKPISF*QKLLFKRILVN Trigger: ATTTACCAAGATTCTTTTGAACAGCAATTTTTGCAAGAAACTAATCGGCTTTACGCAGCCGAAGGTCAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000016681.15 ENSMUST00000050083.6 ENSMUST00000115118.8 ENSMUST00000147129.8 |
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