Pregenerated sensors for CUL4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031446Ensembl transcript IDs: ENSMUST00000016680.14, ENSMUST00000121426.2, ENSMUST00000125514.8
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTaGAGACGGCACAGCAGCTTCACTCTCAGGTGCTTCGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLRIQASTVGAAAGT*RRHSSFTLRCFVCV Trigger: CACACACACGAAGCACCTGAGAGTGAAGCTGCTGTGCCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | AGCGCATGCTGCCCTCCTTTCACCCGGCTGAAGAGCTGGTACATCTaGGTGAGGTCGGGCACCCTGTTCTCATCCAGCAGGTGCTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: SACCPPFTRLKSWYI*VRSGTLFSSSRCSR Trigger: CCTAGAGCACCTGCTGGATGAGAACAGGGTGCCCGACCTCACCCAGATGTACCAGCTCTTCAGCCGGGTGAAAGGAGGGCAGCATGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | AAATACACAGAAGAGAGGCCAATGCTCAGGGTGCAGAGATCCGAGTaGCAGCCTGGACAGTTTCTCCCCAGTGCCCCAGCCCAGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: KYTEERPMLRVQRSE*QPGQFLPSAPAQGS Trigger: AGAGCCCTGGGCTGGGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCCTGAGCATTGGCCTCTCTTCTGTGTATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | CGGCACAGCAGCTTCACTCTCAGGTGCTTCGTGTGTGTGTCTCACTaGGAGACGACAGTCAGCTGGTGCGTCATGCCACGTAGTGGTACT | + |
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Preference number: 1 (lower is better) Translates to: RHSSFTLRCFVCVSH*ETTVSWCVMPRSGT Trigger: AGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACACGAAGCACCTGAGAGTGAAGCTGCTGTGCCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR TCA 90 bp | AGGGAAGATGGGTGTCATCTCAAAGCCCTTGCGCCCTGGGAAGGATaGGCCAAGAACCACATCCTCTGCTCCGAATCCAAGCGTCCACAG | + |
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Preference number: 1 (lower is better) Translates to: REDGCHLKALAPWEG*AKNHILCSESKRPQ Trigger: CTGTGGACGCTTGGATTCGGAGCAGAGGATGTGGTTCTTGGCTCATCCTTCCCAGGGCGCAAGGGCTTTGAGATGACACCCATCTTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | GCCCAGGTAGAACGTCTTGAATACTTCCTGAAGTCTGACCATCTCTaGAGGGAGGTGCACTTCCATGGGTGTGTACGTGGGCCAGTAGCC | + |
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Preference number: 1 (lower is better) Translates to: AQVERLEYFLKSDHL*REVHFHGCVRGPVA Trigger: GGCTACTGGCCCACGTACACACCCATGGAAGTGCACCTCCCTCCAGAGATGGTCAGACTTCAGGAAGTATTCAAGACGTTCTACCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR TCA 90 bp | ATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGGTaGGCTGTGTCTCATGACAGACATGATGTCCTCTTGGCACATCAG | + |
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Preference number: 1 (lower is better) Translates to: MKPPSPSTNDKQPSG*AVSHDRHDVLLAHQ Trigger: CTGATGTGCCAAGAGGACATCATGTCTGTCATGAGACACAGCTCACCCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR GCA 90 bp | TTCCAACTTTCTGAAAATACACAGAAGAGAGGCCAATGCTCAGGGTaGAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCC | + |
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Preference number: 1 (lower is better) Translates to: FQLSENTQKRGQCSG*RDPSGSLDSFSPVP Trigger: GGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCCTGAGCATTGGCCTCTCTTCTGTGTATTTTCAGAAAGTTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR GCA 90 bp | AGGTGCTTCGTGTGTGTGTCTCACTGGGAGACGACAGTCAGCTGGTaGGTCATGCCACGTAGTGGTACTGATTTGGACTGTCTTTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: RCFVCVSHWETTVSW*VMPRSGTDLDCLCL Trigger: GAGACAAAGACAGTCCAAATCAGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACACGAAGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | CCAGTAGCCCATGGTGAGTATGTTCACCGTGAGGTCAATGGGGCCTaGCGCACTCTGGTTCTGCATATGCTGCTTGAAGTGAACCATGAT | + |
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Preference number: 1 (lower is better) Translates to: PVAHGEYVHREVNGA*RTLVLHMLLEVNHD Trigger: ATCATGGTTCACTTCAAGCAGCATATGCAGAACCAGAGTGCGCCAGGCCCCATTGACCTCACGGTGAACATACTCACCATGGGCTACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | CTCAGGTGCTTCGTGTGTGTGTCTCACTGGGAGACGACAGTCAGCTaGTGCGTCATGCCACGTAGTGGTACTGATTTGGACTGTCTTTGT | + |
|
Preference number: 1 (lower is better) Translates to: LRCFVCVSHWETTVS*CVMPRSGTDLDCLC Trigger: ACAAAGACAGTCCAAATCAGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACACGAAGCACCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR GCA 90 bp | TCGTGTGTGTGTCTCACTGGGAGACGACAGTCAGCTGGTGCGTCATaGCACGTAGTGGTACTGATTTGGACTGTCTTTGTCTCGTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: SCVCLTGRRQSAGAS*HVVVLIWTVFVSFH Trigger: ATGGAACGAGACAAAGACAGTCCAAATCAGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CCA 90 bp | TCCTTTGTACAGCAAGCAGTTCTCTCCCAAAGACTCCAGAGACTTTaGCAAATGTATACATACAAAAGGGCAGCAGGCCCAAGGAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: SFVQQAVLSQRLQRL*QMYTYKRAAGPRSG Trigger: CCCACTCCTTGGGCCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTTTGGGAGAGAACTGCTTGCTGTACAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
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| 3UTR TCA 90 bp | AGACATGATGTCCTCTTGGCACATCAGGGACCTCATTTAGAAACCTaGTTTACAGAAGCCAAAGTTTCCAACTTTCTGAAAATACACAGA | + |
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Preference number: 1 (lower is better) Translates to: RHDVLLAHQGPHLET*FTEAKVSNFLKIHR Trigger: TCTGTGTATTTTCAGAAAGTTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCCAAGAGGACATCATGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCCCAGCCCCACAGTCGGGGCAGCTaGAGGGACCTGGAGACGGCA | + |
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Preference number: 2 (lower is better) Translates to: GCRDPSGSLDSFSPVPQPHSRGS*RDLETA Trigger: TGCCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTG...GGGCTGGGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGTGCTGCAGCAGCGCATaGTGCCCTCCTTTCACCCGG | + |
|
Preference number: 2 (lower is better) Translates to: LLRIQASTVGAAAGTWRRCCSSA*CPPFTR Trigger: CCGGGTGAAAGGAGGGCAGCATGCGCTGCTGCAGCA...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGTCATCTCAAAGCCCTTaGGCCCTGGGAAGGATGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LLRIQASTVGAAAGTWRRSSQSP*ALGRMS Trigger: GCTCATCCTTCCCAGGGCGCAAGGGCTTTGAGATGA...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCCCAGCCCAAGCCCGTGGCTTTCTaGCAGAGGAACGAGAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: GCRDPSGSLDSFSPVPQPKPVAF*QRNESL Trigger: CAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCTT...GGGCTGGGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCTCAGGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCGCGCCCTGGGAAGGATaGGCCAAGAACCACATCCTC | + |
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Preference number: 2 (lower is better) Translates to: MLRVQRSEWQPGQFLPSAAPWEG*AKNHIL Trigger: GAGGATGTGGTTCTTGGCTCATCCTTCCCAGGGCGC...GGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCCTGAGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCAGCGTTGTCTGCCATTGCAGCTTCCGCCCACTGTGCTTGCCCAGGTAGAGGCCAATGCTCAGGGTaGAGAGATCCGAGTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VPALSAIAASAHCACPGRGQCSG*RDPSGS Trigger: GCTGCCACTCGGATCTCTGCACCCTGAGCATTGGCC...TCTACCTGGGCAAGCACAGTGGGCGGAAGCTGCAATGGCAGACAACGCTGGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CAA 90 bp | AACATGCCCTCCAGTTTGCTGGTAAACGCAGCTCCGCACTCGTGCTaGAGCTTCGACAGCATGGACTTCTCCGCGTCCACCGACGCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: NMPSSLLVNAAPHSC*SFDSMDFSASTDAL Trigger: GAGCGCGTCGGTGGACGCGGAGAAGTCCATGCTGTCGAAGCTCAAGCACGAGTGCGGAGCTGCGTTTACCAGCAAACTGGAGGGCATGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCACCGTGAGGTCAATGGGGCCTGGCGCACTCTGGTTCTGCATATGCTGCTTTGCAGCAGCGCATGCTaGCCTCCTTTCACCCGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VHREVNGAWRTLVLHMLLCSSAC*PPFTRL Trigger: CAGCCGGGTGAAAGGAGGGCAGCATGCGCTGCTGCA...AAGCAGCATATGCAGAACCAGAGTGCGCCAGGCCCCATTGACCTCACGGTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CAA 90 bp | CTTAAAGTCCGCCTTCAGCACGGCGTGTCCCAGCGTTGTCTGCCATaGCAGCTTCCGCCCACTGTGCTTGCCCAGGTAGAACGTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: LKVRLQHGVSQRCLP*QLPPTVLAQVERLE Trigger: TTCAAGACGTTCTACCTGGGCAAGCACAGTGGGCGGAAGCTGCAATGGCAGACAACGCTGGGACACGCCGTGCTGAAGGCGGACTTTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | CATCTCTGGAGGGAGGTGCACTTCCATGGGTGTGTACGTGGGCCAGTAGCCCATTCATCTCAAAGCCCTTaGGCCCTGGGAAGGATGAGC | + |
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Preference number: 2 (lower is better) Translates to: HLWREVHFHGCVRGPVAHSSQSP*ALGRMS Trigger: GCTCATCCTTCCCAGGGCGCAAGGGCTTTGAGATGA...ATGGGCTACTGGCCCACGTACACACCCATGGAAGTGCACCTCCCTCCAGAGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGGCGCCCTGGGAAGGATaGGCCAAGAACCACATCCTC | + |
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Preference number: 2 (lower is better) Translates to: GNKHETPKPLNKRQAALWAPWEG*AKNHIL Trigger: GAGGATGTGGTTCTTGGCTCATCCTTCCCAGGGCGC...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCCCAGCCCCCTCATTTAGAAACCTaGTTTACAGAAGCCAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: GCRDPSGSLDSFSPVPQPPHLET*FTEAKV Trigger: AACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGG...GGGCTGGGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTCAATGCCTAACAGACTGCCACTaGGAAGCCCCTCTAACCAGG | + |
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Preference number: 2 (lower is better) Translates to: SPWLSARGTRACEGTSQCLTDCH*EAPLTR Trigger: CCTGGTTAGAGGGGCTTCTCAGTGGCAGTCTGTTAG...GCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGTCACCCCAAAGCCAAAACCAGGACCTCCACACTCAACCAGCATGGAAACACAGAAGAGAGGCCAATaGTCAGGGTGCAGAGATCCG | + |
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Preference number: 2 (lower is better) Translates to: AVTPKPKPGPPHSTSMETQKRGQ*SGCRDP Trigger: CGGATCTCTGCACCCTGAGCATTGGCCTCTCTTCTG...TGTTTCCATGCTGGTTGAGTGTGGAGGTCCTGGTTTTGGCTTTGGGGTGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCTTGTTTGGTCTCTTGTTGATGAACGTCTCGAAGGACTCCTTCATCAGGCTGGTACATCTGGGTaGGGTCGGGCACCCTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: CRLVWSLVDERLEGLLHQAGTSG*GRAPCS Trigger: AGAACAGGGTGCCCGACCTCACCCAGATGTACCAGC...CTGATGAAGGAGTCCTTCGAGACGTTCATCAACAAGAGACCAAACAAGCCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CAA 90 bp | TTTGGTCTCTTGTTGATGAACGTCTCGAAGGACTCCTTCATCAGGTaGATGAAGCGCTCGTTCCTCTGGAAGCACACCTCCACCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: FGLLLMNVSKDSFIR*MKRSFLWKHTSTTW Trigger: CCACGTGGTGGAGGTGTGCTTCCAGAGGAACGAGCGCTTCATCAACCTGATGAAGGAGTCCTTCGAGACGTTCATCAACAAGAGACCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR CAA 90 bp | ATGATCTTGTCCAGGATCCTCTCCAGTTCCTCATCTGTGGCTTCTTaGTTGCCGGCCCGTAACTTTGAGTCCACGTGCTTGGCAATGAGC | + |
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Preference number: 2 (lower is better) Translates to: MILSRILSSSSSVAS*LPARNFESTCLAMS Trigger: GCTCATTGCCAAGCACGTGGACTCAAAGTTACGGGCCGGCAACAAAGAAGCCACAGATGAGGAACTGGAGAGGATCCTGGACAAGATCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTCAATGCAAGTCTGACCATCTCTaGAGGGAGGTGCACTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: SPWLSARGTRACEGTSQCKSDHL*REVHFH Trigger: ATGGAAGTGCACCTCCCTCCAGAGATGGTCAGACTT...GCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCCACGTGCTTGGCAATaGGCTCTGCAGGCTTGTTTG | + |
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Preference number: 2 (lower is better) Translates to: STSMETNMKPPSPSTNDKPRAWQ*ALQACL Trigger: CAAACAAGCCTGCAGAGCTCATTGCCAAGCACGTGG...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GGCACATCAGGGACCTCATTTAGAAACCTGATTTACAGAAGCCAAAGTTTCCAATACTCGCTCCAGTGCTaGAGCAGCGCATGCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: GTSGTSFRNLIYRSQSFQYSLQC*SSACCP Trigger: AGGGCAGCATGCGCTGCTGCAGCACTGGAGCGAGTA...TTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTGTGCAGAGATCCGAGTaGCAGCCTGGACAGTTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LSFSLSLHEGKNTAARVIVQRSE*QPGQFL Trigger: GAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCAC...AATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCCACGTAGTGGTACTGATTTGGACTGTCTTTGTCTCGTTCCATATAGTCTCACCCGGCTGAAGAGCTaGTACATCTGGGTGAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: MPRSGTDLDCLCLVPYSLTRLKS*YIWVRS Trigger: CGACCTCACCCAGATGTACCAGCTCTTCAGCCGGGT...GAGACTATATGGAACGAGACAAAGACAGTCCAAATCAGTACCACTACGTGGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGAGCTTCACTCTCAGGTaGTTCGTGTGTGTGTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: STSMETNMKPPSPSTNDKSFTLR*FVCVSH Trigger: GTGAGACACACACACGAAGCACCTGAGAGTGAAGCT...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGAAGAACCACATCCTCTaGTCCGAATCCAAGCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: STSMETNMKPPSPSTNDKKNHIL*SESKRP Trigger: TGGACGCTTGGATTCGGAGCAGAGGATGTGGTTCTT...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCACCGTGAGGTCAATGGGGCCTGGCGCACTCTGGTTCTGCATATGCTGCTTGGTAATCACACAAACTaGAACTTCAACAGTCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VHREVNGAWRTLVLHMLLGNHTN*NFNSQT Trigger: TGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACC...AAGCAGCATATGCAGAACCAGAGTGCGCCAGGCCCCATTGACCTCACGGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTATCTCTGGAGGGAGGTaGACTTCCATGGGTGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: LSFSLSLHEGKNTAARVIISGGR*TSMGVY Trigger: GTACACACCCATGGAAGTGCACCTCCCTCCAGAGAT...AATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR GCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGTCAGCTGGTGCGTCATaGCACGTAGTGGTACTGATT | + |
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Preference number: 2 (lower is better) Translates to: STSMETNMKPPSPSTNDKSAGAS*HVVVLI Trigger: AATCAGTACCACTACGTGGCATGACGCACCAGCTGA...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR CCA 90 bp | GGCACATCAGGGACCTCATTTAGAAACCTGATTTACAGAAGCCAAAGTTTCCAAAAGAGCTGGTACATCTaGGTGAGGTCGGGCACCCTG | + |
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Preference number: 2 (lower is better) Translates to: GTSGTSFRNLIYRSQSFQKSWYI*VRSGTL Trigger: CAGGGTGCCCGACCTCACCCAGATGTACCAGCTCTT...TTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACACAAACTGCAACTTCAACAGTCAAACAGCAGTCACCCCAAAGCCAAAACAGCAGCACCAGCGTCTaGAAGAGGGATACCTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: ITQTATSTVKQQSPQSQNSSTSV*KRDTWN Trigger: GTTCCAGGTATCCCTCTTCCAGACGCTGGTGCTGCT...GTTTTGGCTTTGGGGTGACTGCTGTTTGACTGTTGAAGTTGCAGTTTGTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTCAATGCTGGTACTGTCTATCCTaGAATACTCTCTCTGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: SPWLSARGTRACEGTSQCWYCLS*NTLSVV Trigger: CACTACAGAGAGAGTATTCCAGGATAGACAGTACCA...GCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTCCACTGTGTAGGAACGAGAGCTTGTaGAGGAACTTCTCAATGCGA | + |
|
Preference number: 2 (lower is better) Translates to: SLSLHEGKNTAARVIPLCRNESL*RNFSMR Trigger: TCGCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCT...ACACAGTGGAATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAGGCTTGTTTGGTCTCTTGTTGATGAACGTCTCGAAGGACTCCTTCATCAGCTCTCTCTTTCTCTCTaGGTCTTCATGAGGGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: CRLVWSLVDERLEGLLHQLSLSL*VFMRGR Trigger: TCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAGAG...CTGATGAAGGAGTCCTTCGAGACGTTCATCAACAAGAGACCAAACAAGCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCACATCAGGGACCTCATTTAGAAACCTGATTTACAGAAGCCAAAGTTTCCAAGTGCAGAGATCCGAGTaGCAGCCTGGACAGTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GTSGTSFRNLIYRSQSFQVQRSE*QPGQFL Trigger: GAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCAC...TTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCACGTAGTGGTACTGATTTGGACTGTCTTTGTCTCGTTCCATATAGTCTCTGGAAGAGGGATACCTaGAACTCCTTCTTCCCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: MPRSGTDLDCLCLVPYSLWKRDT*NSFFPS Trigger: GGAGGGGAAGAAGGAGTTCCAGGTATCCCTCTTCCA...GAGACTATATGGAACGAGACAAAGACAGTCCAAATCAGTACCACTACGTGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCACATCAGGGACCTCATTTAGAAACCTGATTTACAGAAGCCAAAGTTTCCAACTCTCTGAGTCTTCATaGGGGGAAGAACACAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: GTSGTSFRNLIYRSQSFQLSESS*GEEHSS Trigger: GCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAG...TTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTCCTCATTTTCATTATTCTGACTATAGCAGCGTCGATCTGGTACTGTCTAAAGCAGCCCTCTGGGTaGGCTGTGTCTCATGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: VFLIFIILTIAASIWYCLKQPSG*AVSHDR Trigger: TCTGTCATGAGACACAGCTCACCCAGAGGGCTGCTT...TAGACAGTACCAGATCGACGCTGCTATAGTCAGAATAATGAAAATGAGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCACGTAGTGGTACTGATTTGGACTGTCTTTGTCTCGTTCCATATAGTCTCAAGAACCACATCCTCTaGTCCGAATCCAAGCGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: MPRSGTDLDCLCLVPYSLKNHIL*SESKRP Trigger: TGGACGCTTGGATTCGGAGCAGAGGATGTGGTTCTT...GAGACTATATGGAACGAGACAAAGACAGTCCAAATCAGTACCACTACGTGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGTATGTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAAGGCCAATGCTCAGGGTaGAGAGATCCGAGTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QYVSRNQQFLCLLTNITKGQCSG*RDPSGS Trigger: GCTGCCACTCGGATCTCTGCACCCTGAGCATTGGCC...TTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR-3UTR TCA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGAAGCAGCCCTCTGGGTaGGCTGTGTCTCATGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RPDFIMVITQTATSTVKQKQPSG*AVSHDR Trigger: TCTGTCATGAGACACAGCTCACCCAGAGGGCTGCTT...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTGTCTTCCTCATTTTCATTATTCTGACTATAGCAGCGTCGATCTGGTACTGAGCTTCACTCTCAGGTaGTTCGTGTGTGTGTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: KCLPHFHYSDYSSVDLVLSFTLR*FVCVSH Trigger: GTGAGACACACACACGAAGCACCTGAGAGTGAAGCT...CAGTACCAGATCGACGCTGCTATAGTCAGAATAATGAAAATGAGGAAGACACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CAA 90 bp | CTGTACACACAGTATGTCTCCAGGAACCAACAATTCCTTTGCCTTTaGACAAACATAACTAAACTCCATATAGTGCCAGGGCAGAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: LYTQYVSRNQQFLCL*TNITKLHIVPGQRS Trigger: GGATCTCTGCCCTGGCACTATATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTGTGTGTACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR-3UTR TCA 90 bp | GTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAACTCCATAGGAACGAGAGCTTGTaGAGGAACTTCTCAATGCGA | + |
|
Preference number: 2 (lower is better) Translates to: VSRNQQFLCLLTNITKLHRNESL*RNFSMR Trigger: TCGCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCT...ATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR-3UTR GCA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGTTCTCATCCAGCAGGTaGTCTAGGCCTTTCTGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: RPDFIMVITQTATSTVKQFSSSR*SRPFCR Trigger: TCTACAGAAAGGCCTAGAGCACCTGCTGGATGAGAA...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCACGTAGTGGTACTGATTTGGACTGTCTTTGTCTCGTTCCATATAGTCTCATCTCCAGGCTTCACTaGAAATTTCAGCTGATTGTA | + |
|
Preference number: 2 (lower is better) Translates to: MPRSGTDLDCLCLVPYSLISRLH*KFQLIV Trigger: TACAATCAGCTGAAATTTCCAGTGAAGCCTGGAGAT...GAGACTATATGGAACGAGACAAAGACAGTCCAAATCAGTACCACTACGTGGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAACTCCATATAGTGGCATGGAAACAAACATaGAACCCCCAAGCCCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: RNQQFLCLLTNITKLHIVAWKQT*NPQAPQ Trigger: TTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGC...CACTATATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR-3UTR GCA 90 bp | CTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTCTTGTGTTTGAAGTCTaGATTGAAGATGAACTTATC | + |
|
Preference number: 2 (lower is better) Translates to: LSFSLSLHEGKNTAARVILVFEV*IEDELI Trigger: GATAAGTTCATCTTCAATGCAGACTTCAAACACAAG...AATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGATTAGCTCTTTATCTTCTTGCTTAGACATAGGCTCAGACATTAGACATAGGAGACTCCAGAGACTTTaGCAAATGTATACATACAAA | + |
|
Preference number: 2 (lower is better) Translates to: KISSLSSCLDIGSDIRHRRLQRL*QMYTYK Trigger: TTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCT...CCTATGTCTAATGTCTGAGCCTATGTCTAAGCAAGAAGATAAAGAGCTAATCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| 3UTR GCA 72 bp | AAGTCCGCCTTCAGCACGGCGTGTCCCAGCGTTGTCTaGCATTGCAGCTTCCGCCCACTGTGCTTGCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSAFSTACPSVV*HCSFRPLCLPR Trigger: CCTGGGCAAGCACAGTGGGCGGAAGCTGCAATGGCAGACAACGCTGGGACACGCCGTGCTGAAGGCGGACTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | TCTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTaGAGGGACCTGGAGACGGCACAGCAGCTTCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: SAPNPSVHSRGS*RDLETAQQLHS Trigger: AGAGTGAAGCTGCTGTGCCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGGACTCCTTCATCAGGTaGATGAAGCGCTCGTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLRIQASTVGAAAGTWRRDSFIR*MKRSFL Trigger: GAGGAACGAGCGCTTCATCAACCTGATGAAGGAGTC...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | TGCCCTCCTTTCACCCGGCTGAAGAGCTGGTACATCTaGGTGAGGTCGGGCACCCTGTTCTCATCCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: CPPFTRLKSWYI*VRSGTLFSSSR Trigger: CCTGCTGGATGAGAACAGGGTGCCCGACCTCACCCAGATGTACCAGCTCTTCAGCCGGGTGAAAGGAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | AGCGCATGCTGCCCTCCTTTCACCCGGCTGAAGAGCTaGTACATCTGGGTGAGGTCGGGCACCCTGTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SACCPPFTRLKS*YIWVRSGTLFS Trigger: TGAGAACAGGGTGCCCGACCTCACCCAGATGTACCAGCTCTTCAGCCGGGTGAAAGGAGGGCAGCATGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGAGACATGATGTCCTCTaGGCACATCAGGGACCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLRIQASTVGAAAGTWRRRHDVL*AHQGPH Trigger: ATGAGGTCCCTGATGTGCCAAGAGGACATCATGTCT...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | CCCTCCAGTTTGCTGGTAAACGCAGCTCCGCACTCGTaGTTGAGCTTCGACAGCATGGACTTCTCCGCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PSSLLVNAAPHS*LSFDSMDFSAS Trigger: GGACGCGGAGAAGTCCATGCTGTCGAAGCTCAAGCACGAGTGCGGAGCTGCGTTTACCAGCAAACTGGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR TCA 72 bp | GGGTGTCATCTCAAAGCCCTTGCGCCCTGGGAAGGATaGGCCAAGAACCACATCCTCTGCTCCGAATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GCHLKALAPWEG*AKNHILCSESK Trigger: CTTGGATTCGGAGCAGAGGATGTGGTTCTTGGCTCATCCTTCCCAGGGCGCAAGGGCTTTGAGATGACACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR TCA 72 bp | GTTAAGGTATTCTGGAACTCGCTAACAGACTGCCACTaGGAAGCCCCTCTAACCAGGCAGGGCCCAGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VKVFWNSLTDCH*EAPLTRQGPGH Trigger: GTGGCCTGGGCCCTGCCTGGTTAGAGGGGCTTCTCAGTGGCAGTCTGTTAGCGAGTTCCAGAATACCTTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | AGCAGGGAGGGAAGATGGGTGTCATCTCAAAGCCCTTaGGCCCTGGGAAGGATGAGCCAAGAACCACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: SREGRWVSSQSP*ALGRMSQEPHP Trigger: AGGATGTGGTTCTTGGCTCATCCTTCCCAGGGCGCAAGGGCTTTGAGATGACACCCATCTTCCCTCCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | AGCTTCACTCTCAGGTGCTTCGTGTGTGTGTCTCACTaGGAGACGACAGTCAGCTGGTGCGTCATGCCACGT | + |
|
Preference number: 3 (lower is better) Translates to: SFTLRCFVCVSH*ETTVSWCVMPR Trigger: ACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACACGAAGCACCTGAGAGTGAAGCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGCTGAACAACTTGTGTTaGAAGTCTGCATTGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: LLRIQASTVGAAAGTWRRLNNLC*KSALKM Trigger: CATCTTCAATGCAGACTTCAAACACAAGTTGTTCAG...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | AAGCGCTCGTTCCTCTGGAAGCACACCTCCACCACGTaGTCCACTTTGTCCTTAAAGTCCAGCAGGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: KRSFLWKHTSTT*STLSLKSSRSW Trigger: CCAAGACCTGCTGGACTTTAAGGACAAAGTGGACCACGTGGTGGAGGTGTGCTTCCAGAGGAACGAGCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | GACTCCTTCATCAGGTTGATGAAGCGCTCGTTCCTCTaGAAGCACACCTCCACCACGTGGTCCACTTTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: DSFIRLMKRSFL*KHTSTTWSTLS Trigger: GGACAAAGTGGACCACGTGGTGGAGGTGTGCTTCCAGAGGAACGAGCGCTTCATCAACCTGATGAAGGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | GTGTGTGTGTCTCACTGGGAGACGACAGTCAGCTGGTaGGTCATGCCACGTAGTGGTACTGATTTGGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: VCVSHWETTVSW*VMPRSGTDLDC Trigger: ACAGTCCAAATCAGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | CATGGTGAGTATGTTCACCGTGAGGTCAATGGGGCCTaGCGCACTCTGGTTCTGCATATGCTGCTTGAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HGEYVHREVNGA*RTLVLHMLLEV Trigger: CACTTCAAGCAGCATATGCAGAACCAGAGTGCGCCAGGCCCCATTGACCTCACGGTGAACATACTCACCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | TTCGTGTGTGTGTCTCACTGGGAGACGACAGTCAGCTaGTGCGTCATGCCACGTAGTGGTACTGATTTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: FVCVSHWETTVS*CVMPRSGTDLD Trigger: GTCCAAATCAGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACACACACACGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTCCATGGGTGTGTACGTGGGCCAGTAGCCCATGGTGAGTATGTTCACCGTGTTGTTCCAAAGGTCTaGATGTACTCGCTCCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: HFHGCVRGPVAHGEYVHRVVPKV*MYSLQC Trigger: GCACTGGAGCGAGTACATCAAGACCTTTGGAACAAC...ACGGTGAACATACTCACCATGGGCTACTGGCCCACGTACACACCCATGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGGCTCCGCACTCGTGCTaGAGCTTCGACAGCATGGAC | + |
|
Preference number: 3 (lower is better) Translates to: STSMETNMKPPSPSTNDKAPHSC*SFDSMD Trigger: GTCCATGCTGTCGAAGCTCAAGCACGAGTGCGGAGC...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | TGTCTCACTGGGAGACGACAGTCAGCTGGTGCGTCATaGCACGTAGTGGTACTGATTTGGACTGTCTTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CLTGRRQSAGAS*HVVVLIWTVFV Trigger: GACAAAGACAGTCCAAATCAGTACCACTACGTGGCATGACGCACCAGCTGACTGTCGTCTCCCAGTGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | GAACGTCTTGAATACTTCCTGAAGTCTGACCATCTCTaGAGGGAGGTGCACTTCCATGGGTGTGTACGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ERLEYFLKSDHL*REVHFHGCVRG Trigger: CCCACGTACACACCCATGGAAGTGCACCTCCCTCCAGAGATGGTCAGACTTCAGGAAGTATTCAAGACGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTTCCATGGGTGTGTACGTGGGCCAGTAGCCCATGGTGAGTATGTTCACCGTGGCTTGTTTGGTCTCTaGTTGATGAACGTCTCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HFHGCVRGPVAHGEYVHRGLFGL*LMNVSK Trigger: CTTCGAGACGTTCATCAACAAGAGACCAAACAAGCC...ACGGTGAACATACTCACCATGGGCTACTGGCCCACGTACACACCCATGGAAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGAAAGTCCAGCAGGTCTaGGACCATGTCTTTGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GNKHETPKPLNKRQAALWKVQQV*DHVFVF Trigger: AAAGACAAAGACATGGTCCAAGACCTGCTGGACTTT...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTCACCCCAAAGCCAAAACCAGGACCTCCACACTCAACCAGCATGGAAACACCACCAGCAGCCTTTTaGCTAAGTCTTTCTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: AVTPKPKPGPPHSTSMETPPAAF*LSLSYK Trigger: TTTATAAGAAAGACTTAGCAAAAAGGCTGCTGGTGG...TGTTTCCATGCTGGTTGAGTGTGGAGGTCCTGGTTTTGGCTTTGGGGTGACTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | AACCAGGCCCGATTTTATTATGGTAATCACACAAACTaGAACTTCAACAGTCAAACAGCAGTCACCCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NQARFYYGNHTN*NFNSQTAVTPK Trigger: CTTTGGGGTGACTGCTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR TCA 72 bp | AAACCTGATTTACAGAAGCCAAAGTTTCCAACTTTCTaGAAATACACAGAAGAGAGGCCAATGCTCAGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KPDLQKPKFPTF*KYTEERPMLRV Trigger: CACCCTGAGCATTGGCCTCTCTTCTGTGTATTTTCAGAAAGTTGGAAACTTTGGCTTCTGTAAATCAGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR TCA 72 bp | GTCCTCTTGGCACATCAGGGACCTCATTTAGAAACCTaGTTTACAGAAGCCAAAGTTTCCAACTTTCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLLAHQGPHLET*FTEAKVSNFLK Trigger: TTTCAGAAAGTTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCCAAGAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR CCA 72 bp | CTCATTTTCATTATTCTGACTATAGCAGCGTCGATCTaGTACTGTCTATCCTGGAATACTCTCTCTGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LIFIILTIAASI*YCLSWNTLSVV Trigger: CACTACAGAGAGAGTATTCCAGGATAGACAGTACCAGATCGACGCTGCTATAGTCAGAATAATGAAAATGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| 3UTR GCA 72 bp | TACACACAGTATGTCTCCAGGAACCAACAATTCCTTTaGCTTTTGACAAACATAACTAAACTCCATATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: YTQYVSRNQQFL*LLTNITKLHIV Trigger: CACTATATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTGTGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | GGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCCCAGCCCATCTGGGCCTGGACATaGTCTTCACAGACCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GCRDPSGSLDSFSPVPQPIWAWT*SSQTWR Trigger: GCGCCAGGTCTGTGAAGACCATGTCCAGGCCCAGAT...GGGCTGGGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | ATGCTCAGGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCTGCTGCAGCAGCGCATaGTGCCCTCCTTTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: MLRVQRSEWQPGQFLPSACCSSA*CPPFTR Trigger: CCGGGTGAAAGGAGGGCAGCATGCGCTGCTGCAGCA...GGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCCTGAGCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR CAA 72 bp | CGCCTTCAGCACGGCGTGTCCCAGCGTTGTCTGCCATaGCAGCTTCCGCCCACTGTGCTTGCCCAGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RLQHGVSQRCLP*QLPPTVLAQVE Trigger: TTCTACCTGGGCAAGCACAGTGGGCGGAAGCTGCAATGGCAGACAACGCTGGGACACGCCGTGCTGAAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| CDS-3UTR TCA 90 bp | GCAGTCACCCCAAAGCCAAAACCAGGACCTCCACACTCAACCAGCATGGAAACACGTTGGTGCGGCCCATaGGAGCCGAGACGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVTPKPKPGPPHSTSMETRWCGP*EPRRCP Trigger: AGGGCAGCGTCTCGGCTCTCATGGGCCGCACCAACG...TGTTTCCATGCTGGTTGAGTGTGGAGGTCCTGGTTTTGGCTTTGGGGTGACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | TGTTGCAAAAGTGTCTGTCATCATCACCATGCCAACACCACTATGGAGCCTCGTACGCCGCGGGCTTGGTaGGGCCGTTGGTGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CCKSVCHHHHANTTMEPRTPRAW*GRWCGP Trigger: TGGGCCGCACCAACGGCCTCACCAAGCCCGCGGCGT...ACGAGGCTCCATAGTGGTGTTGGCATGGTGATGATGACAGACACTTTTGCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR CAA 72 bp | TCCAGTTTGCTGGTAAACGCAGCTCCGCACTCGTGCTaGAGCTTCGACAGCATGGACTTCTCCGCGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SSLLVNAAPHSC*SFDSMDFSAST Trigger: GGTGGACGCGGAGAAGTCCATGCTGTCGAAGCTCAAGCACGAGTGCGGAGCTGCGTTTACCAGCAAACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTCCCAAAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGACGCCGCGGGCTTGGTaGGGCCGTTGGTGCGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSPKDSRDFGKCIHTKGQTPRAW*GRWCGP Trigger: TGGGCCGCACCAACGGCCTCACCAAGCCCGCGGCGT...CTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTTTGGGAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CCA 90 bp | AGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTCAATGCGGGCCTGGCGCACTCTaGTTCTGCATATGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPWLSARGTRACEGTSQCGPGAL*FCICCL Trigger: CAAGCAGCATATGCAGAACCAGAGTGCGCCAGGCCC...GCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGATCTCCAGGCTTCACTaGAAATTTCAGCTGATTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLRIQASTVGAAAGTWRRISRLH*KFQLIV Trigger: TACAATCAGCTGAAATTTCCAGTGAAGCCTGGAGAT...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | ACACACACAACAAACCAAGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGCCACGTGCTTGGCAATaGGCTCTGCAGGCTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: THTTNQARGFLPEERELVPRAWQ*ALQACL Trigger: CAAACAAGCCTGCAGAGCTCATTGCCAAGCACGTGG...CACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCTTGGTTTGTTGTGTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | GGGTGCAGAGATCCGAGTGGCAGCCTGGACAGTTTCTCCCCAGTGCCCCAGCCCGAAACTAGAAGATTATaGCCAAGTGTCTTCCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GCRDPSGSLDSFSPVPQPETRRL*PSVFLI Trigger: AATGAGGAAGACACTTGGTCATAATCTTCTAGTTTC...GGGCTGGGGCACTGGGGAGAAACTGTCCAGGCTGCCACTCGGATCTCTGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | AAACCAAGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTGGAACCTCCCTGTCCTaGATCAGCCTCTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KPSPWLSARGTRACEGTSGTSLS*ISLWPS Trigger: TGAAGGCCAGAGGCTGATGCAGGACAGGGAGGTTCC...AGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCTTGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGTGTCCTCTATGCCAGTaGCCATTTTTATTTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LLRIQASTVGAAAGTWRRCPLCQ*PFLFLQ Trigger: TTGAAGAAATAAAAATGGCCACTGGCATAGAGGACA...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | GGAAAGAAATTAACTCCTTTGTACAGCAAGCAGTTCTCTCCCAAAGACTCCAGACGTTGGTGCGGCCCATaGGAGCCGAGACGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GKKLTPLYSKQFSPKDSRRWCGP*EPRRCP Trigger: AGGGCAGCGTCTCGGCTCTCATGGGCCGCACCAACG...TCTGGAGTCTTTGGGAGAGAACTGCTTGCTGTACAAAGGAGTTAATTTCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR TCA 90 bp | TCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTCCACTGTGTGCTGGTACATCTGGGTaGGGTCGGGCACCCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLHEGKNTAARVIPLCAGTSG*GRAPCS Trigger: AGAACAGGGTGCCCGACCTCACCCAGATGTACCAGC...ACACAGTGGAATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | CACTGTGTCCCACAATCACACACACAACAAACCAAGCCCGTGGCTTTCTGCCAGAGAGCTCCATGTCCTTaGACATGCCCTCCAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCVPQSHTQQTKPVAFCQRAPCP*TCPPVC Trigger: GCAAACTGGAGGGCATGTTCAAGGACATGGAGCTCT...CTGGCAGAAAGCCACGGGCTTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGTACTCGCTCCAGTGCTaGAGCAGCGCATGCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: STSMETNMKPPSPSTNDKYSLQC*SSACCP Trigger: AGGGCAGCATGCGCTGCTGCAGCACTGGAGCGAGTA...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | GCAGTCACCCCAAAGCCAAAACCAGGACCTCCACACTCAACCAGCATGGAAACAATCTCTGGAGGGAGGTaGACTTCCATGGGTGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AVTPKPKPGPPHSTSMETISGGR*TSMGVY Trigger: GTACACACCCATGGAAGTGCACCTCCCTCCAGAGAT...TGTTTCCATGCTGGTTGAGTGTGGAGGTCCTGGTTTTGGCTTTGGGGTGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGTGGAAGAGGGATACCTaGAACTCCTTCTTCCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNKHETPKPLNKRQAALWWKRDT*NSFFPS Trigger: GGAGGGGAAGAAGGAGTTCCAGGTATCCCTCTTCCA...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGATACTTCCTGAAGTCTaGCCATCTCTGGAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GNKHETPKPLNKRQAALWILPEV*PSLEGG Trigger: ACCTCCCTCCAGAGATGGTCAGACTTCAGGAAGTAT...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGCTGAATGGGAGGATCTaGGCCTGGACATGGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RALSFSLSLHEGKNTAARLNGRI*AWTWSS Trigger: TGAAGACCATGTCCAGGCCCAGATCCTCCCATTCAG...CCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAGAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGAAGAGCTGGTACATCTaGGTGAGGTCGGGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: STSMETNMKPPSPSTNDKKSWYI*VRSGTL Trigger: CAGGGTGCCCGACCTCACCCAGATGTACCAGCTCTT...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGGGAGATCTGAGAGCATaGTTAGCAAACTCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GNKHETPKPLNKRQAALWGDLRA*LANSEA Trigger: TGCTTCGGAGTTTGCTAAGCATGCTCTCAGATCTCC...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAAAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGCAGGCTCACCTCCCTGTCCTaGATCAGCCTCTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPKTPETLANVYIQKGSRLTSLS*ISLWPS Trigger: TGAAGGCCAGAGGCTGATGCAGGACAGGGAGGTGAG...CCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTTTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR GCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGAGTACCTCCCTGTCCTaGATCAGCCTCTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STSMETNMKPPSPSTNDKSTSLS*ISLWPS Trigger: TGAAGGCCAGAGGCTGATGCAGGACAGGGAGGTACT...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| CDS-3UTR CCA 90 bp | AAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGCAGGCCCAAGATCTGGGCCTGGACATaGTCTTCACAGACCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: KTPETLANVYIQKGSRPKIWAWT*SSQTWR Trigger: GCGCCAGGTCTGTGAAGACCATGTCCAGGCCCAGAT...CTTGGGCCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CCA 90 bp | CTCCCAAAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGCAGGGGGAGGATCTGGGCCTaGACATGGTCTTCACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: LPKTPETLANVYIQKGSRGRIWA*TWSSQT Trigger: GGTCTGTGAAGACCATGTCCAGGCCCAGATCCTCCC...CCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTTTGGGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGCTGTCGCTGATGATGTaGTTCCTAAACAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNKHETPKPLNKRQAALWLSLMM*FLNSSR Trigger: CCTAGAGCTGTTTAGGAACCACATCATCAGCGACAG...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | CTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTACCCGGCTGAAGAGCTaGTACATCTGGGTGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LSFSLSLHEGKNTAARVITRLKS*YIWVRS Trigger: CGACCTCACCCAGATGTACCAGCTCTTCAGCCGGGT...AATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR CAA 72 bp | TTGTTGATGAACGTCTCGAAGGACTCCTTCATCAGGTaGATGAAGCGCTCGTTCCTCTGGAAGCACACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLMNVSKDSFIR*MKRSFLWKHTS Trigger: GGAGGTGTGCTTCCAGAGGAACGAGCGCTTCATCAACCTGATGAAGGAGTCCTTCGAGACGTTCATCAACAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCTCTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGTTCTCATCCAGCAGGTaGTCTAGGCCTTTCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RALSFSLSLHEGKNTAARFSSSR*SRPFCR Trigger: TCTACAGAAAGGCCTAGAGCACCTGCTGGATGAGAA...CCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAGAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | GGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGCAGCCCTCTGGGAGTCTTTGTACACCTaGAGATCTGAGAGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNKHETPKPLNKRQAALWESLYT*RSESML Trigger: AAGCATGCTCTCAGATCTCCAGGTGTACAAAGACTC...CCAGAGGGCTGCTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAACTCCATGCCTTGACCGCTTCGTaGAGCTTCCGCCACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSRNQQFLCLLTNITKLHALTAS*SFRHVS Trigger: GGACACGTGGCGGAAGCTTCACGAAGCGGTCAAGGC...ATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCTAGGGTAATTCCACTGTGTCCCACAATCACACACACAACAAACCAACTAGTGAGTCTTCTCTaGATGGGAGGATCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TAARVIPLCPTITHTTNQLVSLL*MGGSGP Trigger: AGGCCCAGATCCTCCCATTCAGAGAAGACTCACTAG...TTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTGGAATTACCCTAGCTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAACTCCATTGCAGCAGCGCATGCTaGCCTCCTTTCACCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSRNQQFLCLLTNITKLHCSSAC*PPFTRL Trigger: CAGCCGGGTGAAAGGAGGGCAGCATGCGCTGCTGCA...ATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | AGGGCTCTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGAGTCTTTGTACACCTaGAGATCTGAGAGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RALSFSLSLHEGKNTAARESLYT*RSESML Trigger: AAGCATGCTCTCAGATCTCCAGGTGTACAAAGACTC...CCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAGAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| 3UTR CAA 72 bp | ACAGCAAGCAGTTCTCTCCCAAAGACTCCAGAGACTTaGGCAAATGTATACATACAAAAGGGCAGCAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TASSSLPKTPET*ANVYIQKGSRP Trigger: GGGCCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTTTGGGAGAGAACTGCTTGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR GCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGTCAATGGTCTTACTCTaGACCATCCTGTCGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: STSMETNMKPPSPSTNDKSMVLL*TILSLM Trigger: CATCAGCGACAGGATGGTGCAGAGTAAGACCATTGA...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | GGCACATCAGGGACCTCATTTAGAAACCTGATTTACAGAAGCCAAAGTTTCCAAAGCAGCACCAGCGTCTaGAAGAGGGATACCTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGTSFRNLIYRSQSFQSSTSV*KRDTWN Trigger: GTTCCAGGTATCCCTCTTCCAGACGCTGGTGCTGCT...TTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | AAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGCAGGCCCAAGGGAGATCTGAGAGCATaGTTAGCAAACTCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KTPETLANVYIQKGSRPKGDLRA*LANSEA Trigger: TGCTTCGGAGTTTGCTAAGCATGCTCTCAGATCTCC...CTTGGGCCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCTAGGGTAATTCCACTGTGTCCCACAATCACACACACAACAAACCAAGGAGATCTGAGAGCATaGTTAGCAAACTCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TAARVIPLCPTITHTTNQGDLRA*LANSEA Trigger: TGCTTCGGAGTTTGCTAAGCATGCTCTCAGATCTCC...TTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTGGAATTACCCTAGCTGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000125514.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGATGTACTCGCTCCAGTaGTGCAGCAGCGCATGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPDFIMVITQTATSTVKQMYSLQ*CSSACC Trigger: GCAGCATGCGCTGCTGCAGCACTGGAGCGAGTACAT...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | AAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGCAGGCCCAAGCTGTCGCTGATGATGTaGTTCCTAAACAGCTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KTPETLANVYIQKGSRPKLSLMM*FLNSSR Trigger: CCTAGAGCTGTTTAGGAACCACATCATCAGCGACAG...CTTGGGCCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGAAGCGCTCGTTCCTCTaGAAGCACACCTCCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: RPDFIMVITQTATSTVKQKRSFL*KHTSTT Trigger: CGTGGTGGAGGTGTGCTTCCAGAGGAACGAGCGCTT...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | AGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTCAATGCAAGACATCTTTACCATaGATGAAACGGAAGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SPWLSARGTRACEGTSQCKTSLP*MKRKRI Trigger: GATTCTCTTCCGTTTCATCCATGGTAAAGATGTCTT...GCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGGGAGGTGCACTTCCATaGGTGTGTACGTGGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPDFIMVITQTATSTVKQGGALP*VCTWAS Trigger: ACTGGCCCACGTACACACCCATGGAAGTGCACCTCC...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | ATCACACAAACTGCAACTTCAACAGTCAAACAGCAGTCACCCCAAAGCCAAAACAAGTCTGACCATCTCTaGAGGGAGGTGCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITQTATSTVKQQSPQSQNKSDHL*REVHFH Trigger: ATGGAAGTGCACCTCCCTCCAGAGATGGTCAGACTT...GTTTTGGCTTTGGGGTGACTGCTGTTTGACTGTTGAAGTTGCAGTTTGTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | ATCACACAAACTGCAACTTCAACAGTCAAACAGCAGTCACCCCAAAGCCAAAACTTGTTCCAAAGGTCTTaGTGTACTCGCTCCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITQTATSTVKQQSPQSQNLFQRS*CTRSSA Trigger: AGCACTGGAGCGAGTACATCAAGACCTTTGGAACAA...GTTTTGGCTTTGGGGTGACTGCTGTTTGACTGTTGAAGTTGCAGTTTGTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | TGTTGCAAAAGTGTCTGTCATCATCACCATGCCAACACCACTATGGAGCCTCGTATATGCTGCTTGAAGTaGACCATGATGTCTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CCKSVCHHHHANTTMEPRICCLK*TMMSLE Trigger: CTCCAAAGACATCATGGTTCACTTCAAGCAGCATAT...ACGAGGCTCCATAGTGGTGTTGGCATGGTGATGATGACAGACACTTTTGCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGCTAGGGTAATTCCACTGTGTCCCACAATCACACACACAACAAACCAAGTCTTGAATACTTCCTaGAGTCTGACCATCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TAARVIPLCPTITHTTNQVLNTS*SLTISG Trigger: TCCAGAGATGGTCAGACTTCAGGAAGTATTCAAGAC...TTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTGGAATTACCCTAGCTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | CAGTATGTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAAGGGAGGATCTGGGCCTaGACATGGTCTTCACAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QYVSRNQQFLCLLTNITKGRIWA*TWSSQT Trigger: GGTCTGTGAAGACCATGTCCAGGCCCAGATCCTCCC...TTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGTGGTACTGTCTATCCTaGAATACTCTCTCTGTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STSMETNMKPPSPSTNDKWYCLS*NTLSVV Trigger: CACTACAGAGAGAGTATTCCAGGATAGACAGTACCA...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR CAA 72 bp | TCTTTACCATGGATGAAACGGAAGAGAATCATGATCTaGTCCAGGATCCTCTCCAGTTCCTCATCTGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPWMKRKRIMI*SRILSSSSSVA Trigger: AGCCACAGATGAGGAACTGGAGAGGATCCTGGACAAGATCATGATTCTCTTCCGTTTCATCCATGGTAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125514.8 |
||
| CDS-3UTR TCA 90 bp | ATCACACAAACTGCAACTTCAACAGTCAAACAGCAGTCACCCCAAAGCCAAAACAACGGAAGAGAATCATaGTCTTGTCCAGGATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITQTATSTVKQQSPQSQNNGRES*SCPGSS Trigger: AGAGGATCCTGGACAAGATCATGATTCTCTTCCGTT...GTTTTGGCTTTGGGGTGACTGCTGTTTGACTGTTGAAGTTGCAGTTTGTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | CAGTTCTCTCCCAAAGACTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGTCAATGGTCTTACTCTaGACCATCCTGTCGCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: QFSPKDSRDFGKCIHTKGSMVLL*TILSLM Trigger: CATCAGCGACAGGATGGTGCAGAGTAAGACCATTGA...CCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAGTCTTTGGGAGAGAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR TCA 90 bp | AAGATTAGCTCTTTATCTTCTTGCTTAGACATAGGCTCAGACATTAGACATAGGCTAGTGAGTCTTCTCTaGATGGGAGGATCTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KISSLSSCLDIGSDIRHRLVSLL*MGGSGP Trigger: AGGCCCAGATCCTCCCATTCAGAGAAGACTCACTAG...CCTATGTCTAATGTCTGAGCCTATGTCTAAGCAAGAAGATAAAGAGCTAATCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAACTCCATCTGTGGCTTCTTTGTTaGCGGCCCGTAACTTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSRNQQFLCLLTNITKLHLWLLC*RPVTLS Trigger: ACTCAAAGTTACGGGCCGGCAACAAAGAAGCCACAG...ATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | ACAGCAGCTAGGGTAATTCCACTGTGTCCCACAATCACACACACAACAAACCAAACTCACTGTCCTCTATaGCAGTGGCCATTTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TAARVIPLCPTITHTTNQTHCPL*QWPFLF Trigger: AAATAAAAATGGCCACTGGCATAGAGGACAGTGAGT...TTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTGGAATTACCCTAGCTGCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | GGCACATCAGGGACCTCATTTAGAAACCTGATTTACAGAAGCCAAAGTTTCCAAGTAGTGGTACTGATTTaGACTGTCTTTGTCTCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTSGTSFRNLIYRSQSFQVVVLI*TVFVSF Trigger: GAACGAGACAAAGACAGTCCAAATCAGTACCACTAC...TTGGAAACTTTGGCTTCTGTAAATCAGGTTTCTAAATGAGGTCCCTGATGTGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| 3UTR CAA 72 bp | CAGTATGTCTCCAGGAACCAACAATTCCTTTGCCTTTaGACAAACATAACTAAACTCCATATAGTGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYVSRNQQFLCL*TNITKLHIVPG Trigger: CCCTGGCACTATATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CCA 90 bp | AAGATTAGCTCTTTATCTTCTTGCTTAGACATAGGCTCAGACATTAGACATAGGGAGTCTTTGTACACCTaGAGATCTGAGAGCATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KISSLSSCLDIGSDIRHRESLYT*RSESML Trigger: AAGCATGCTCTCAGATCTCCAGGTGTACAAAGACTC...CCTATGTCTAATGTCTGAGCCTATGTCTAAGCAAGAAGATAAAGAGCTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CCA 90 bp | CAGTATGTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAAATAGCAGCGTCGATCTaGTACTGTCTATCCTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYVSRNQQFLCLLTNITKIAASI*YCLSWN Trigger: ATTCCAGGATAGACAGTACCAGATCGACGCTGCTAT...TTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR GCA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGCTTGTGTTTGAAGTCTaGATTGAAGATGAACTTATC | + |
|
Preference number: 4 (lower is better) Translates to: RPDFIMVITQTATSTVKQLVFEV*IEDELI Trigger: GATAAGTTCATCTTCAATGCAGACTTCAAACACAAG...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | CTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGCACGCCAACGCCGCGGGCTaGGTGAGGCCGTTGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRIQASTVGAAAGTWRRHANAAG*VRPLVR Trigger: CCGCACCAACGGCCTCACCAAGCCCGCGGCGTTGGC...GTGCCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | CTGCTCCGAATCCAAGCGTCCACAGTCGGGGCAGCTGCAGGGACCTGGAGACGGAAGAGAATCATGATCTaGTCCAGGATCCTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLRIQASTVGAAAGTWRRKRIMI*SRILSS Trigger: ACTGGAGAGGATCCTGGACAAGATCATGATTCTCTT...CCGTCTCCAGGTCCCTGCAGCTGCCCCGACTGTGGACGCTTGGATTCGGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | ACACACACAACAAACCAAGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGGCTCCGCACTCGTGCTaGAGCTTCGACAGCATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: THTTNQARGFLPEERELVAPHSC*SFDSMD Trigger: GTCCATGCTGTCGAAGCTCAAGCACGAGTGCGGAGC...CACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCTTGGTTTGTTGTGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | GCTTCTAAGGGAAAGAAATTAACTCCTTTGTACAGCAAGCAGTTCTCTCCCAAAGCCAACGCCGCGGGCTaGGTGAGGCCGTTGGTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ASKGKKLTPLYSKQFSPKANAAG*VRPLVR Trigger: CCGCACCAACGGCCTCACCAAGCCCGCGGCGTTGGC...TTTGGGAGAGAACTGCTTGCTGTACAAAGGAGTTAATTTCTTTCCCTTAGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CAA 90 bp | GCAGTCACCCCAAAGCCAAAACCAGGACCTCCACACTCAACCAGCATGGAAACAGACTCCTTCATCAGGTaGATGAAGCGCTCGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVTPKPKPGPPHSTSMETDSFIR*MKRSFL Trigger: GAGGAACGAGCGCTTCATCAACCTGATGAAGGAGTC...TGTTTCCATGCTGGTTGAGTGTGGAGGTCCTGGTTTTGGCTTTGGGGTGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | CACTGTGTCCCACAATCACACACACAACAAACCAAGCCCGTGGCTTTCTGCCAGGAGAGCTCCATGTCCTaGAACATGCCCTCCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HCVPQSHTQQTKPVAFCQESSMS*NMPSSL Trigger: CAAACTGGAGGGCATGTTCAAGGACATGGAGCTCTC...CTGGCAGAAAGCCACGGGCTTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGACTTTGGCAAATGTATACATACAAAAGGGCAGCAGGCCCAAGGAGTTACAGCTCCTCCAGGTaGTACCTGATGGATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQRLWQMYTYKRAAGPRSYSSSR*YLMDVL Trigger: CAGCACATCCATCAGGTACAACCTGGAGGAGCTGTA...ACTCCTTGGGCCTGCTGCCCTTTTGTATGTATACATTTGCCAAAGTCTCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCGTGGCTTTCTGCCAGAGGAACGAGAGCTTGTGAAGGAACTTCTCAATGCTTGTTTGGTCTCTTGTaGATGAACGTCTCGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPWLSARGTRACEGTSQCLFGLL*MNVSKD Trigger: GTCCTTCGAGACGTTCATCAACAAGAGACCAAACAA...GCATTGAGAAGTTCCTTCACAAGCTCTCGTTCCTCTGGCAGAAAGCCACGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | TCAACCAGCATGGAAACAAACATGAAACCCCCAAGCCCCTCAACAAACGACAAGTCTGTGGCTTCTTTGTaGCCGGCCCGTAACTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: STSMETNMKPPSPSTNDKSVASL*PARNFE Trigger: CTCAAAGTTACGGGCCGGCAACAAAGAAGCCACAGA...CTTGTCGTTTGTTGAGGGGCTTGGGGGTTTCATGTTTGTTTCCATGCTGGTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | CTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGGTAATTTACAGCTCCTCCAGGTaGTACCTGATGGATGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSFSLSLHEGKNTAARVIYSSSR*YLMDVL Trigger: CAGCACATCCATCAGGTACAACCTGGAGGAGCTGTA...AATTACCCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | AGGGCTCTCTCTTTCTCTCTGAGTCTTCATGAGGGGAAGAACACAGCAGCTAGGAAAGTCCAGCAGGTCTaGGACCATGTCTTTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: RALSFSLSLHEGKNTAARKVQQV*DHVFVF Trigger: AAAGACAAAGACATGGTCCAAGACCTGCTGGACTTT...CCTAGCTGCTGTGTTCTTCCCCTCATGAAGACTCAGAGAGAAAGAGAGAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | ATCACACAAACTGCAACTTCAACAGTCAAACAGCAGTCACCCCAAAGCCAAAACTCATCTGTGGCTTCTTaGTTGCCGGCCCGTAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: ITQTATSTVKQQSPQSQNSSVAS*LPARNF Trigger: AAAGTTACGGGCCGGCAACAAAGAAGCCACAGATGA...GTTTTGGCTTTGGGGTGACTGCTGTTTGACTGTTGAAGTTGCAGTTTGTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGCTAGGGTAATTCCACTGTGTCCCACAATCACACACACAACAAACCAACGTAGTGGTACTGATTaGGACTGTCTTTGTCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: TAARVIPLCPTITHTTNQRSGTD*DCLCLV Trigger: AACGAGACAAAGACAGTCCAAATCAGTACCACTACG...TTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTGGAATTACCCTAGCTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGGCTGCTTGTAGAGCGTaGGGGAGACTTTGTGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RPDFIMVITQTATSTVKQAACRA*GRLCEN Trigger: GTTCTCACAAAGTCTCCCCAACGCTCTACAAGCAGC...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | ACAGCAGCTAGGGTAATTCCACTGTGTCCCACAATCACACACACAACAAACCAATCTGATCATGATCATTaGTCTGCAGTGATCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TAARVIPLCPTITHTTNQSDHDH*SAVILP Trigger: TGGCAAGATCACTGCAGACAAATGATCATGATCAGA...TTGGTTTGTTGTGTGTGTGATTGTGGGACACAGTGGAATTACCCTAGCTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | TGTTGCAAAAGTGTCTGTCATCATCACCATGCCAACACCACTATGGAGCCTCGTCCACCAGCAGCCTTTTaGCTAAGTCTTTCTTATAAA | + |
|
Preference number: 5 (lower is better) Translates to: CCKSVCHHHHANTTMEPRPPAAF*LSLSYK Trigger: TTTATAAGAAAGACTTAGCAAAAAGGCTGCTGGTGG...ACGAGGCTCCATAGTGGTGTTGGCATGGTGATGATGACAGACACTTTTGCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | CAGTATGTCTCCAGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAAGTTGTTCCAAAGGTCTaGATGTACTCGCTCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QYVSRNQQFLCLLTNITKVVPKV*MYSLQC Trigger: GCACTGGAGCGAGTACATCAAGACCTTTGGAACAAC...TTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCTGGAGACATACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | AGGCCCGATTTTATTATGGTAATCACACAAACTGCAACTTCAACAGTCAAACAGGGCTTGTTTGGTCTCTaGTTGATGAACGTCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RPDFIMVITQTATSTVKQGLFGL*LMNVSK Trigger: CTTCGAGACGTTCATCAACAAGAGACCAAACAAGCC...CTGTTTGACTGTTGAAGTTGCAGTTTGTGTGATTACCATAATAAAATCGGGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | AAGATTAGCTCTTTATCTTCTTGCTTAGACATAGGCTCAGACATTAGACATAGGTCTGATCATGATCATTaGTCTGCAGTGATCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KISSLSSCLDIGSDIRHRSDHDH*SAVILP Trigger: TGGCAAGATCACTGCAGACAAATGATCATGATCAGA...CCTATGTCTAATGTCTGAGCCTATGTCTAAGCAAGAAGATAAAGAGCTAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAGGAACTTCTCAATGCGAAGTTAGAGAGTAACAGAAACAATAAAGAAGTACTGAACAACTTGTGTTaGAAGTCTGCATTGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VKELLNAKLESNRNNKEVLNNLC*KSALKM Trigger: CATCTTCAATGCAGACTTCAAACACAAGTTGTTCAG...TACTTCTTTATTGTTTCTGTTACTCTCTAACTTCGCATTGAGAAGTTCCTTCAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS-3UTR CAA 90 bp | AGGAACCAACAATTCCTTTGCCTTTTGACAAACATAACTAAACTCCATATAGTGTGTTTGAAGTCTGCATaGAAGATGAACTTATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RNQQFLCLLTNITKLHIVCLKSA*KMNLSP Trigger: TGGAGATAAGTTCATCTTCAATGCAGACTTCAAACA...CACTATATGGAGTTTAGTTATGTTTGTCAAAAGGCAAAGGAATTGTTGGTTCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016680.14 |
||
| CDS CAA 90 bp | GGCTTGGCGGGGCCACCGGCCAACGCCGCGGGCTTGGTGAGGCCGTaGGTGCGGCCCATGAGAGCCGAGACGCTGCCCTTCCGAGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GLAGPPANAAGLVRP*VRPMRAETLPFRGP Trigger: GGGCCCTCGGAAGGGCAGCGTCTCGGCTCTCATGGGCCGCACCAACGGCCTCACCAAGCCCGCGGCGTTGGCCGGTGGCCCCGCCAAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000121426.2 |
||
| CDS CAA 72 bp | CCCGGCTTGGCGGGGCCACCGGCCAACGCCGCGGGCTaGGTGAGGCCGTTGGTGCGGCCCATGAGAGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGLAGPPANAAG*VRPLVRPMRAE Trigger: CTCGGCTCTCATGGGCCGCACCAACGGCCTCACCAAGCCCGCGGCGTTGGCCGGTGGCCCCGCCAAGCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000121426.2 |
||
| CDS GCA 72 bp | CAAATGCAGTCGGCCGCACAGCTCACCTCCCTGTCCTaGATCAGCCTCTGGCCTTCAGCAGCGTATAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: QMQSAAQLTSLS*ISLWPSAAYRQ Trigger: CTGTCTATACGCTGCTGAAGGCCAGAGGCTGATGCAGGACAGGGAGGTGAGCTGTGCGGCCGACTGCATTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121426.2 |
||
| CDS CCA 72 bp | ACGCTGTCTAGTGAGTCTTCTCTGAATGGGAGGATCTaGGCCTGGACATGGTCTTCACAGACCTGGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TLSSESSLNGRI*AWTWSSQTWRS Trigger: GCTGCGCCAGGTCTGTGAAGACCATGTCCAGGCCCAGATCCTCCCATTCAGAGAAGACTCACTAGACAGCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000121426.2 |
||
| CDS CAA 72 bp | CAAAGATTTTCAACAGCCTGGTACAGCTCCTCCAGGTaGTACCTGATGGATGTGCTGCTCTGGATGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QRFSTAWYSSSR*YLMDVLLWMAL Trigger: CAAGGCCATCCAGAGCAGCACATCCATCAGGTACAACCTGGAGGAGCTGTACCAGGCTGTTGAAAATCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000121426.2 |
||
| CDS CCA 72 bp | ATGGTCTTACTCTGCACCATCCTGTCGCTGATGATGTaGTTCCTAAACAGCTCTAGGCCCATGTCCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: MVLLCTILSLMM*FLNSSRPMSQI Trigger: TATCTGGGACATGGGCCTAGAGCTGTTTAGGAACCACATCATCAGCGACAGGATGGTGCAGAGTAAGACCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000016680.14 ENSMUST00000121426.2 |
||