Pregenerated sensors for CUL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004364Ensembl transcript IDs: ENSMUST00000163119.8, ENSMUST00000164108.8, ENSMUST00000167293.2, ENSMUST00000168372.2, ENSMUST00000170897.8
Found 184 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTATTTACACCAGAAAGCAATCCATCAGTGTCCCACCGTACCTGTaGAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: SIYTRKQSISVPPYL*KHSKVHREPVRTAH Trigger: GTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACGGTGGGACACTGATGGATTGCTTTCTGGTGTAAATAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR GCA 90 bp | GTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTaGCCACACCTTTACTGTCTCATGGAAAGGTGGAGAACATGTAGA | + |
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Preference number: 1 (lower is better) Translates to: VPVQAQQGAPRTCPY*PHLYCLMERWRTCR Trigger: TCTACATGTTCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR TCA 90 bp | AATCAACTGATGTTGAAAACTCTCAGAGGGAGTAGAGGCTTGATCTaGGTGGTCTATAACACGTACTGCAATTTAACAGAAGAGATGGTC | + |
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Preference number: 1 (lower is better) Translates to: NQLMLKTLRGSRGLI*VVYNTYCNLTEEMV Trigger: GACCATCTCTTCTGTTAAATTGCAGTACGTGTTATAGACCACTCAGATCAAGCCTCTACTCCCTCTGAGAGTTTTCAACATCAGTTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
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| 3UTR GCA 90 bp | AGACTAGGAAGTGCAAGTGGTAGGATAAAGCATGCGCCAATTGTATaGCTGGGTCTTTGTATATGTATCAAACCTTTAAACAATACCAGC | + |
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Preference number: 1 (lower is better) Translates to: RLGSASGRIKHAPIV*LGLCICIKPLNNTS Trigger: GCTGGTATTGTTTAAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATCCTACCACTTGCACTTCCTAGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR TCA 90 bp | AACACGTACTGCAATTTAACAGAAGAGATGGTCGTCTTAATAGTATaGTTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: NTYCNLTEEMVVLIV*FKRTSQSMRRVQSK Trigger: CTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAATCATACTATTAAGACGACCATCTCTTCTGTTAAATTGCAGTACGTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
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| 3UTR-3UTR TCA 90 bp | CGTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTGCCCACAGAGGGAGTAGAGGCTTaGTCTGAGTGGTCTATAACA | + |
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Preference number: 2 (lower is better) Translates to: RTCASTARCTENLSVLPTEGVEA*SEWSIT Trigger: TGTTATAGACCACTCAGATCAAGCCTCTACTCCCTC...TGTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR CCA 90 bp | ATCAGTGTCCCACCGTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCCGCCAATTGTATGCCTaGGTCTTTGTATATGTATCA | + |
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Preference number: 2 (lower is better) Translates to: ISVPPYLCKHSKVHREPVRQLYA*VFVYVS Trigger: TGATACATATACAAAGACCCAGGCATACAATTGGCG...GACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACGGTGGGACACTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCTGTCTACAACTTCTCCTTTCCGCTCTCTGGCAATCATATCCAATAAAGATGTGCCTCCTGATGTaGTGCACTGAGGACACAACA | + |
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Preference number: 2 (lower is better) Translates to: LLCLQLLLSALWQSYPIKMCLLM*CTEDTT Trigger: TGTTGTGTCCTCAGTGCATCACATCAGGAGGCACAT...CTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGTAGACAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
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| 3UTR-3UTR TCA 90 bp | ACAACTTCTCCTTTCCGCTCTCTGGCAATCATATCCAATAAAGTTTGCCGAAGACTCGCACCTTTACAGTaGAGAAATCTGGCGGACACC | + |
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Preference number: 2 (lower is better) Translates to: TTSPFRSLAIISNKVCRRLAPLQ*RNLADT Trigger: GGTGTCCGCCAGATTTCTTCACTGTAAAGGTGCGAG...TCTTCGGCAAACTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
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| 3UTR-3UTR TCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATGAGGGAGTAGAGGCTTaGTCTGAGTGGTCTATAACA | + |
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Preference number: 2 (lower is better) Translates to: GTVKMISTGITLESLKLNEGVEA*SEWSIT Trigger: TGTTATAGACCACTCAGATCAAGCCTCTACTCCCTC...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCTACAACTTCTCCTTTCCGCTCTCTGGCAATCATATCCAATAAAGTTTGCCTGGCGGACACCAAGTaGTCAAAGTTAACATCACCA | + |
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Preference number: 2 (lower is better) Translates to: LSTTSPFRSLAIISNKVCLADTK*SKLTSP Trigger: TGGTGATGTTAACTTTGATCACTTGGTGTCCGCCAG...GCAAACTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGTAGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
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| 3UTR-3UTR GCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGAACTTCCCAGTCCATaGGAAGAGTACAGTCCAAGA | + |
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Preference number: 2 (lower is better) Translates to: KMISTGITLESLKLNQLMELPSP*EEYSPR Trigger: TCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTC...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| 3UTR-3UTR TCA 90 bp | GACTTCAGTGATAGTTGGAAGCACAGAGGAACGGACACACAAATCTTCAGCACAAGTCAGGGTATGTATTaGTGTCCAAATAAAGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: DFSDSWKHRGTDTQIFSTSQGMY*CPNKGP Trigger: AGGACCTTTATTTGGACATCAATACATACCCTGACT...TGTGCTGAAGATTTGTGTGTCCGTTCCTCTGTGCTTCCAACTATCACTGAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCACAGAGGAACGGACACACAAATCTTCAGCACAAAGCACATCTTTGAAAACCAGCTGCCACCTTTGTaGTCTGACATACTTGAGTTA | + |
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Preference number: 2 (lower is better) Translates to: KHRGTDTQIFSTKHIFENQLPPL*SDILEL Trigger: TAACTCAAGTATGTCAGAGCACAAAGGTGGCAGCTG...GTTTTCAAAGATGTGCTTTGTGCTGAAGATTTGTGTGTCCGTTCCTCTGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATAGTAGAGGCTTGATCTaGGTGGTCTATAACACGTAC | + |
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Preference number: 2 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDSRGLI*VVYNTY Trigger: GTACGTGTTATAGACCACTCAGATCAAGCCTCTACT...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACTTCTCCTTTCCGCTCTCTGGCAATCATATCCAATAAAGTTTGCCGAAGATACAGTGAAGAAATCTaGCGGACACCAAGTGATCAA | + |
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Preference number: 2 (lower is better) Translates to: TTSPFRSLAIISNKVCRRYSEEI*RTPSDQ Trigger: TTGATCACTTGGTGTCCGCCAGATTTCTTCACTGTA...TCTTCGGCAAACTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
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| 3UTR CAA 90 bp | ACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGGGATAACGTaGGAAAGCCTGAAGCTCAATCAACTGATGTTGAAAACTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: TFSRGTVKMISTGIT*ESLKLNQLMLKTLR Trigger: TCTGAGAGTTTTCAACATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCCTCGGGAAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCGAAGATGATCCCTAATACACCCATACCGTACAACTTGATCTCGAAAAATAATAATGGGATAAACTaGCAGCATGTGCCTCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LPKMIPNTPIPYNLISKNNNGIN*QHVPPD Trigger: ATCAGGAGGCACATGCTGTCAGTTTATCCCATTATT...ATTTTTCGAGATCAAGTTGTACGGTATGGGTGTATTAGGGATCATCTTCGGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCACAGAGGAACGGACACACAAATCTTCAGCACAAAGCACATCTTTGAAAACCACAGCTGCAAGAACTaGAGAATTCCTTCAAACTAT | + |
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Preference number: 2 (lower is better) Translates to: KHRGTDTQIFSTKHIFENHSCKN*RIPSNY Trigger: ATAGTTTGAAGGAATTCTTCAGTTCTTGCAGCTGTG...GTTTTCAAAGATGTGCTTTGTGCTGAAGATTTGTGTGTCCGTTCCTCTGTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCACAGAGGAACGGACACACAAATCTTCAGCACAAAGCACATCTTTGAAAACCTCTTCAGAGGACAATaGATAGCTAAATATCCACGT | + |
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Preference number: 2 (lower is better) Translates to: KHRGTDTQIFSTKHIFENLFRGQ*IAKYPR Trigger: ACGTGGATATTTAGCTATCCATTGTCCTCTGAAGAG...GTTTTCAAAGATGTGCTTTGTGCTGAAGATTTGTGTGTCCGTTCCTCTGTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR CAA 90 bp | ATACCAAATGCATCACATGAATTTTGTAAGGTAGCAGAGCCAGCATaGCCCAACAAATACATTTACTTTAACTCAGAAGCAAGCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: IPNASHEFCKVAEPA*PNKYIYFNSEASIY Trigger: GTAGATGCTTGCTTCTGAGTTAAAGTAAATGTATTTGTTGGGCAATGCTGGCTCTGCTACCTTACAAAATTCATGTGATGCATTTGGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR GCA 90 bp | GATAAAGCATGCGCCAATTGTATGCCTGGGTCTTTGTATATGTATCAAACCTTTCTCTTTTGCCATTTTTaGTACCCAACTTACACAATG | + |
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Preference number: 2 (lower is better) Translates to: DKACANCMPGSLYMYQTFLFCHF*YPTYTM Trigger: CATTGTGTAAGTTGGGTAGCAAAAATGGCAAAAGAG...AAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR GCA 72 bp | ACCAGAAAGCAATCCATCAGTGTCCCACCGTACCTGTaGAAGCACAGCAAGGTGCACCGAGAACCTGTCCGT | + |
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Preference number: 3 (lower is better) Translates to: TRKQSISVPPYL*KHSKVHREPVR Trigger: ACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACGGTGGGACACTGATGGATTGCTTTCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR GCA 72 bp | CAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTaGCCACACCTTTACTGTCTCATGGAAAGGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QAQQGAPRTCPY*PHLYCLMERWR Trigger: TCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR CCA 72 bp | GAACCTGTCCGTACTGCCCACACCTTTACTGTCTCATaGAAAGGTGGAGAACATGTAGAGATTAAGATCCTA | + |
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Preference number: 3 (lower is better) Translates to: EPVRTAHTFTVS*KGGEHVEIKIL Trigger: TAGGATCTTAATCTCTACATGTTCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGCAGTACGGACAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR-3UTR CAA 90 bp | GACTTCAGTGATAGTTGGAAGCACAGAGGAACGGACACACAAATCTTCAGCACACTCAATCAACTGATGTaGAAAACTCTCAGAGGGAGT | + |
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Preference number: 3 (lower is better) Translates to: DFSDSWKHRGTDTQIFSTLNQLM*KTLRGS Trigger: ACTCCCTCTGAGAGTTTTCAACATCAGTTGATTGAG...TGTGCTGAAGATTTGTGTGTCCGTTCCTCTGTGCTTCCAACTATCACTGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR CCA 72 bp | TTGCTCCTCTGTCTACAACTTCTCCTTTCCGCTCTCTaGCAATCATATCCAATAAAGTTTGCCGAAGATGAT | + |
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Preference number: 3 (lower is better) Translates to: LLLCLQLLLSAL*QSYPIKFAEDD Trigger: ATCATCTTCGGCAAACTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGTAGACAGAGGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167293.2 ENSMUST00000170897.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTGTCTACAACTTCTCCTTTCCGCTCTCTGGCAATCATATCCAATAAAGTTTCATCACCATGGCTGTTaGATGATCATTCCAAGCTTG | + |
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Preference number: 3 (lower is better) Translates to: LCLQLLLSALWQSYPIKFHHHGC*MIIPSL Trigger: CAAGCTTGGAATGATCATCAAACAGCCATGGTGATG...AAACTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGTAGACAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167293.2 ENSMUST00000170897.8 |
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| 3UTR-3UTR CAA 90 bp | TTTTGTAAGGTAGCAGAGCCAGCATTGCCCAACAAATACATTTACTTTAACTCAAACCAGCTGCCACCTTaGTGCTCTGACATACTTGAG | + |
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Preference number: 3 (lower is better) Translates to: FCKVAEPALPNKYIYFNSNQLPP*CSDILE Trigger: CTCAAGTATGTCAGAGCACAAAGGTGGCAGCTGGTT...TGAGTTAAAGTAAATGTATTTGTTGGGCAATGCTGGCTCTGCTACCTTACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR TCA 72 bp | ATGTTGAAAACTCTCAGAGGGAGTAGAGGCTTGATCTaGGTGGTCTATAACACGTACTGCAATTTAACAGAA | + |
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Preference number: 3 (lower is better) Translates to: MLKTLRGSRGLI*VVYNTYCNLTE Trigger: TTCTGTTAAATTGCAGTACGTGTTATAGACCACTCAGATCAAGCCTCTACTCCCTCTGAGAGTTTTCAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
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| 3UTR GCA 72 bp | AGTGCAAGTGGTAGGATAAAGCATGCGCCAATTGTATaGCTGGGTCTTTGTATATGTATCAAACCTTTAAAC | + |
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Preference number: 3 (lower is better) Translates to: SASGRIKHAPIV*LGLCICIKPLN Trigger: GTTTAAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATCCTACCACTTGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| 3UTR TCA 72 bp | TGTCCCTACATATACATTAGACCTAATCTGTACAGCTaGGCTGTCTTCACTTCCAAACTGTTAAAAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: CPYIYIRPNLYS*AVFTSKLLKVA Trigger: AGCTACTTTTAACAGTTTGGAAGTGAAGACAGCTCAGCTGTACAGATTAGGTCTAATGTATATGTAGGGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| CDS-3UTR CCA 90 bp | CGTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTGCCCACACCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: RTCASTARCTENLSVLPTPGSAS*CPSGCP Trigger: CGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGG...TGTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| CDS-3UTR CCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMPGSAS*CPSGCP Trigger: CGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGG...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR CCA 90 bp | CTACAACTTCTCCTTTCCGCTCTCTGGCAATCATATCCAATAAAGTTTGCCGAACCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LQLLLSALWQSYPIKFAEPGSAS*CPSGCP Trigger: CGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGG...TTCGGCAAACTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAGAAGTTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170897.8 |
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| CDS-3UTR GCA 90 bp | GCCCACACCTTTACTGTCTCATGGAAAGGTGGAGAACATGTAGAGATTAAGATCCCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACA | + |
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Preference number: 4 (lower is better) Translates to: AHTFTVSWKGGEHVEIKIPSGCP*LCSDST Trigger: TGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGG...GATCTTAATCTCTACATGTTCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
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| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYWCPSG*PCLCSD Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCA...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR GCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCCTTCCGGCTGCCCGTaGCTTTGCTCAGATTCGACA | + |
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Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNPSGCP*LCSDST Trigger: TGTCGAATCTGAGCAAAGGCACGGGCAGCCGGAAGG...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR CCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGAGGACCCGCTGTGTTaGTTTACCACAGGCGAGGGA | + |
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Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMEDPLC*FTTGEG Trigger: TCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTC...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR TCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGCACTTTGGTGTGGCTaGCTGAGTAGGCCAATATCC | + |
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Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMALWCG*LSRPIS Trigger: GGATATTGGCCTACTCAGTCAGCCACACCAAAGTGC...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR TCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATTGTGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNCDAGV*AVDHCV Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCACA...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR TCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACTCTGCAGAACCCATGTaGTGCTGGAGTGTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYSAEPM*CWSVSC Trigger: ACAGCTCACACTCCAGCATCACATGGGTTCTGCAGA...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR TCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATTCTGCAGAACCCATGTaGTGCTGGAGTGTGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNSAEPM*CWSVSC Trigger: ACAGCTCACACTCCAGCATCACATGGGTTCTGCAGA...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR GCA 90 bp | CCTCATAGACTGATCTTCCTTCAAGACCTAAAATCATTAACATCTGGCAAGCATTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PHRLIFLQDLKSLTSGKHWCPSG*PCLCSD Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCA...ATGCTTGCCAGATGTTAATGATTTTAGGTCTTGAAGGAAGATCAGTCTATGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170897.8 |
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| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYVLVGC*TLVWLT Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGCCATTTTTGCTACCCAACTTACACAATGCGCAAAGTGCTAATAAGCAAGAGGACCCGCTGTGTTaGTTTACCACAGGCGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLPFLLPNLHNAQSANKQEDPLC*FTTGEG Trigger: TCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTC...TTGCTTATTAGCACTTTGCGCATTGTGTAAGTTGGGTAGCAAAAATGGCAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACTCATGTGCTTGGAAATaGGTTCCCTCTCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYSCAWK*VPSPPP Trigger: AGGTGGTGGAGAGGGAACTCATTTCCAAGCACATGA...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGTTTGGTGTGGCTGACTaGGTAGGCCAATATCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMFGVAD*VGQYPV Trigger: AACGGGATATTGGCCTACTCAGTCAGCCACACCAAA...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAAGCACTTTGGTGTGGCTaGCTGAGTAGGCCAATATCC | + |
|
Preference number: 4 (lower is better) Translates to: TVKMISTGITLESLKLNQALWCG*LSRPIS Trigger: GGATATTGGCCTACTCAGTCAGCCACACCAAAGTGC...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATTGTGATGCTGGAGTGTaGGCTGTCGACCACTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDCDAGV*AVDHCV Trigger: AACACAGTGGTCGACAGCTCACACTCCAGCATCACA...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACACTTGGGTTCTTTTGTaGGGACCCGCTGTGTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYTWVLL*GPAVLV Trigger: AACCAACACAGCGGGTCCTCACAAAAGAACCCAAGT...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGGTGGCATTGAGATCTaGAGAACCCATGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMGGIEI*RTHVML Trigger: CAGCATCACATGGGTTCTGCAGATCTCAATGCCACC...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGGTGGCATTGAGATCTaGAGAACCCATGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYGGIEI*RTHVML Trigger: CAGCATCACATGGGTTCTGCAGATCTCAATGCCACC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGAGAACCAGTTACTTGTaGACCGCCAACACCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMRTSYL*TANTNL Trigger: GAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCT...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACAGAACCAGTTACTTGTaGACCGCCAACACCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYRTSYL*TANTNL Trigger: GAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCT...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGTGCTGGTGGGATGTTaGACTTTGGTGTGGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDVLVGC*TLVWLT Trigger: AGTCAGCCACACCAAAGTGCAACATCCCACCAGCAC...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGGTGTCCTTCCGGCTaGCCGTGCCTTTGCTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNWCPSG*PCLCSD Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGATTTGTCAAGGCAGTaGATCACCCGCTCTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYDLSRQ*ITRSIS Trigger: GGAAATAGAGCGGGTGATGCACTGCCTTGACAAATC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATAGCATGTCTTGGTGCTaGTGGGATGTTGCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDSMSWC*WDVALW Trigger: CCAAAGTGCAACATCCCACCAGCACCAAGACATGCT...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACCTTCCAGTTTCGATGTaGATTGACATCCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYLPVSM*IDIHTQ Trigger: CTGAGTGTGGATGTCAATTCACATCGAAACTGGAAG...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | GATAAAGCATGCGCCAATTGTATGCCTGGGTCTTTGTATATGTATCAAACCTTTTTTGGTGTGGCTGACTaGGTAGGCCAATATCCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: DKACANCMPGSLYMYQTFFGVAD*VGQYPV Trigger: AACGGGATATTGGCCTACTCAGTCAGCCACACCAAA...AAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | GAATTTAGTACATCTTCTCGCACCTTTACAGTGAAGAAATCTGGCGGACACCAACATATTTTTCATCCATaGTCATCGGAAAGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFSTSSRTFTVKKSGGHQHIFHP*SSERPG Trigger: TCCGGGCCTTTCCGATGACCATGGATGAAAAATATG...TTGGTGTCCGCCAGATTTCTTCACTGTAAAGGTGCGAGAAGATGTACTAAATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
||
| CDS-3UTR CCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACTGGTCATCTGGAAAGTaGAGACTTGCAGTATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYWSSGK*RLAVCA Trigger: AGCACATACTGCAAGTCTCCACTTTCCAGATGACCA...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATCTCAAAAGCATGTCTTaGTGCTGGTGGGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDLKSMS*CWWDVA Trigger: TGCAACATCCCACCAGCACCAAGACATGCTTTTGAG...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | TTGTATATGTATCAAACCTTTAAACAATACCAGCGAAGGAAATGTCACAAGCAGCCACAGGCGAGGGACTaGAGGGCTCTAACAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYMYQTFKQYQRRKCHKQPQARD*RALTSS Trigger: AGAACTTGTTAGAGCCCTCCAGTCCCTCGCCTGTGG...CTGCTTGTGACATTTCCTTCGCTGGTATTGTTTAAAGGTTTGATACATATACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCCACAGGCGAGGGACTaGAGGGCTCTAACAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNPQARD*RALTSS Trigger: AGAACTTGTTAGAGCCCTCCAGTCCCTCGCCTGTGG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGAAAGTTTGCCGAAGATaGTCCCTAATACACCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMKVCRR*SLIHPY Trigger: GTATGGGTGTATTAGGGATCATCTTCGGCAAACTTT...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATTTGGCTGCAACTGTTTaGATCTTGACTCTGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNLAATV*ILTLCS Trigger: ACTACACAGAGTCAAGATTCAAACAGTTGCAGCCAA...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGAGACTTGCAGTATGTaGTTCCGTGTATTAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYETCSM*FRVLEP Trigger: TGGTTCTAATACACGGAAGCACATACTGCAAGTCTC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAATGGAAAGTGGAGACTTaGAGTATGTGCTTCCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVKMISTGITLESLKLNQWKVET*SMCFRV Trigger: TACACGGAAGCACATACTGCAAGTCTCCACTTTCCA...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCCATTTTTGCTACCCAACTTACACAATGCGCAAAGTGCTAATAAGCAAGATTTGTCAAGGCAGTaGATCACCCGCTCTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLPFLLPNLHNAQSANKQDLSRQ*ITRSIS Trigger: GGAAATAGAGCGGGTGATGCACTGCCTTGACAAATC...TTGCTTATTAGCACTTTGCGCATTGTGTAAGTTGGGTAGCAAAAATGGCAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAAAAAAGCATGTCTTGGTaGTGGTGGGATGTTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TVKMISTGITLESLKLNQKSMSW*WWDVAL Trigger: AAGTGCAACATCCCACCAGCACCAAGACATGCTTTT...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | GCCCACACCTTTACTGTCTCATGGAAAGGTGGAGAACATGTAGAGATTAAGATCGCTACTAAAACATTGTaGTGCATCTTCTTCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: AHTFTVSWKGGEHVEIKIATKTL*CIFFLD Trigger: GTCTAGGAAGAAGATGCAGCACAATGTTTTAGTAGC...GATCTTAATCTCTACATGTTCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATCATATTTTTCATCCATaGTCATCGGAAAGGCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDHIFHP*SSERPG Trigger: TCCGGGCCTTTCCGATGACCATGGATGAAAAATATG...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACCTCCTTTCCGCTCTCTaGCAATCATATCCAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYLLSAL*QSYPIK Trigger: CTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAG...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| 3UTR CAA 72 bp | CGAGGAACTGTAAAGATGATCTCTACAGGGATAACGTaGGAAAGCCTGAAGCTCAATCAACTGATGTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGTVKMISTGIT*ESLKLNQLMLK Trigger: TTTCAACATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCCTCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGTTCTGTTAGCCCTTTaGCTCCCTTTTTCAGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: KMISTGITLESLKLNQLMVLLAL*LPFSVY Trigger: ATAAACTGAAAAAGGGAGTCAAAGGGCTAACAGAAC...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AAGCAACACTACAGAAACACATTTACATCAACACTGAAGACCTGGGGAAATGAACTTCCAGTTTCGATGTaGATTGACATCCACACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQHYRNTFTSTLKTWGNELPVSM*IDIHTQ Trigger: CTGAGTGTGGATGTCAATTCACATCGAAACTGGAAG...TTCATTTCCCCAGGTCTTCAGTGTTGATGTAAATGTGTTTCTGTAGTGTTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAGAACCAGTTACTTGTaGACCGCCAACACCAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNRTSYL*TANTNL Trigger: GAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR GCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGAGACTTGCAGTATGTaGTTCCGTGTATTAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDETCSM*FRVLEP Trigger: TGGTTCTAATACACGGAAGCACATACTGCAAGTCTC...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | GATAAAGCATGCGCCAATTGTATGCCTGGGTCTTTGTATATGTATCAAACCTTTTGGAAAGTGGAGACTTaGAGTATGTGCTTCCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DKACANCMPGSLYMYQTFWKVET*SMCFRV Trigger: TACACGGAAGCACATACTGCAAGTCTCCACTTTCCA...AAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTGCCATTTTTGCTACCCAACTTACACAATGCGCAAAGTGCTAATAAGCAAAAAAGCATGTCTTGGTaGTGGTGGGATGTTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: LLPFLLPNLHNAQSANKQKSMSW*WWDVAL Trigger: AAGTGCAACATCCCACCAGCACCAAGACATGCTTTT...TTGCTTATTAGCACTTTGCGCATTGTGTAAGTTGGGTAGCAAAAATGGCAAAAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGCTACTAAAACATTGTaGTGCATCTTCTTCCTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYATKTL*CIFFLD Trigger: GTCTAGGAAGAAGATGCAGCACAATGTTTTAGTAGC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAGCATGTCTTGGTGCTaGTGGGATGTTGCACTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNSMSWC*WDVALW Trigger: CCAAAGTGCAACATCCCACCAGCACCAAGACATGCT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATCGGATTCACCTTGTTTaGCTGCAACTGTTTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDRIHLV*LQLFES Trigger: AGATTCAAACAGTTGCAGCCAAACAAGGTGAATCCG...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATTTCTGGCTTTCCATCTaGAAAAATTCTGCAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNFWLSI*KNSADI Trigger: AATGTCTGCAGAATTTTTTCAGATGGAAAGCCAGAA...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACATCCATAGTTGTGTTTaGGATGCTCATATCCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYIHSCV*DAHIPK Trigger: TTTAGGGATATGAGCATCTCAAACACAACTATGGAT...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGCAAGCATTTCTTATTaGTCCTCTGTCTACAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDASISY*SSVYNF Trigger: GAAGTTGTAGACAGAGGAGCAATAAGAAATGCTTGC...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATTTCACCTTGTTTGGCTaGAACTGTTTGAATCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDFTLFG*NCLNLD Trigger: GTCAAGATTCAAACAGTTGCAGCCAAACAAGGTGAA...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATACTAAAACATTGTGCTaGATCTTCTTCCTAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNTKTLC*IFFLDF Trigger: GAAGTCTAGGAAGAAGATGCAGCACAATGTTTTAGT...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATTCATACATTCACACATaGTCTTCAAACCATTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVKMISTGITLESLKLNSYIHT*SSNHLA Trigger: TGCCAAATGGTTTGAAGACCATGTGTGAATGTATGA...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACTCATACATTCACACATaGTCTTCAAACCATTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYSYIHT*SSNHLA Trigger: TGCCAAATGGTTTGAAGACCATGTGTGAATGTATGA...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCTCAAAAGCATGTCTTaGTGCTGGTGGGATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNLKSMS*CWWDVA Trigger: TGCAACATCCCACCAGCACCAAGACATGCTTTTGAG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATTGTTTCTTTCCTTTCTaGGTCGGATTCACCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDCFFPF*VGFTLF Trigger: AAACAAGGTGAATCCGACCCAGAAAGGAAAGAAACA...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATTTCTGGCTTTCCATCTaGAAAAATTCTGCAGACATT | + |
|
Preference number: 4 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDFWLSI*KNSADI Trigger: AATGTCTGCAGAATTTTTTCAGATGGAAAGCCAGAA...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGGAAAGTGGAGACTTaGAGTATGTGCTTCCGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNWKVET*SMCFRV Trigger: TACACGGAAGCACATACTGCAAGTCTCCACTTTCCA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR GCA 90 bp | TTTTGTAAGGTAGCAGAGCCAGCATTGCCCAACAAATACATTTACTTTAACTCACATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FCKVAEPALPNKYIYFNSHMCIL*DPQVFV Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...TGAGTTAAAGTAAATGTATTTGTTGGGCAATGCTGGCTCTGCTACCTTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGGTCATCTGGAAAGTaGAGACTTGCAGTATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNWSSGK*RLAVCA Trigger: AGCACATACTGCAAGTCTCCACTTTCCAGATGACCA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTAAGGTAGCAGAGCCAGCATTGCCCAACAAATACATTTACTTTAACTCACTCCTTTCCGCTCTCTaGCAATCATATCCAATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FCKVAEPALPNKYIYFNSLLSAL*QSYPIK Trigger: CTTTATTGGATATGATTGCCAGAGAGCGGAAAGGAG...TGAGTTAAAGTAAATGTATTTGTTGGGCAATGCTGGCTCTGCTACCTTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAATTATTGAAGGATTCTTaGAGGAAGCGATCAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: TVKMISTGITLESLKLNQLLKDS*RKRSNL Trigger: TAGGTTTGATCGCTTCCTCCAAGAATCCTTCAATAA...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CCA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACTTAACTGTAAATATGTaGCCACTTTCTATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYLTVNM*PLSISL Trigger: CAAGGAGATAGAAAGTGGCCACATATTTACAGTTAA...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| 3UTR CAA 72 bp | GCATCACATGAATTTTGTAAGGTAGCAGAGCCAGCATaGCCCAACAAATACATTTACTTTAACTCAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASHEFCKVAEPA*PNKYIYFNSEA Trigger: TGCTTCTGAGTTAAAGTAAATGTATTTGTTGGGCAATGCTGGCTCTGCTACCTTACAAAATTCATGTGATGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATAAAGTTTGCCGAAGATaGTCCCTAATACACCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNKVCRR*SLIHPY Trigger: GTATGGGTGTATTAGGGATCATCTTCGGCAAACTTT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTTGGCTGCAACTGTTTaGATCTTGACTCTGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNLAATV*ILTLCS Trigger: ACTACACAGAGTCAAGATTCAAACAGTTGCAGCCAA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATGAGACTTGCAGTATGTaGTTCCGTGTATTAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNETCSM*FRVLEP Trigger: TGGTTCTAATACACGGAAGCACATACTGCAAGTCTC...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCATATGTGTATACTTTaGGATCCTCAGGTGTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNHMCIL*DPQVFV Trigger: CACGAACACCTGAGGATCGCAAAGTATACACATATG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR GCA 90 bp | TTGCCGAAGATGATCCCTAATACACCCATACCGTACAACTTGATCTCGAAAAATCAAAACCATTGTATATaGATTTCTATAGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPKMIPNTPIPYNLISKNQNHCI*ISIELL Trigger: GAGGAGCTCTATAGAAATGCATATACAATGGTTTTG...ATTTTTCGAGATCAAGTTGTACGGTATGGGTGTATTAGGGATCATCTTCGGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167293.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAACACTACAGAAACACATTTACATCAACACTGAAGACCTGGGGAAATGAATTATTGAAGGATTCTTaGAGGAAGCGATCAAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KQHYRNTFTSTLKTWGNELLKDS*RKRSNL Trigger: TAGGTTTGATCGCTTCCTCCAAGAATCCTTCAATAA...TTCATTTCCCCAGGTCTTCAGTGTTGATGTAAATGTGTTTCTGTAGTGTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCGGATTCACCTTGTTTaGCTGCAACTGTTTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNRIHLV*LQLFES Trigger: AGATTCAAACAGTTGCAGCCAAACAAGGTGAATCCG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR TCA 90 bp | TTGTATATGTATCAAACCTTTAAACAATACCAGCGAAGGAAATGTCACAAGCAGGTTCTGTTAGCCCTTTaGCTCCCTTTTTCAGTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LYMYQTFKQYQRRKCHKQVLLAL*LPFSVY Trigger: ATAAACTGAAAAAGGGAGTCAAAGGGCTAACAGAAC...CTGCTTGTGACATTTCCTTCGCTGGTATTGTTTAAAGGTTTGATACATATACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAACACTACAGAAACACATTTACATCAACACTGAAGACCTGGGGAAATGAACAAAACCATTGTATATaGATTTCTATAGAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KQHYRNTFTSTLKTWGNEQNHCI*ISIELL Trigger: GAGGAGCTCTATAGAAATGCATATACAATGGTTTTG...TTCATTTCCCCAGGTCTTCAGTGTTGATGTAAATGTGTTTCTGTAGTGTTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | TTGTATATGTATCAAACCTTTAAACAATACCAGCGAAGGAAATGTCACAAGCAGGCAAGCATTTCTTATTaGTCCTCTGTCTACAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LYMYQTFKQYQRRKCHKQASISY*SSVYNF Trigger: GAAGTTGTAGACAGAGGAGCAATAAGAAATGCTTGC...CTGCTTGTGACATTTCCTTCGCTGGTATTGTTTAAAGGTTTGATACATATACAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR GCA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTTCACCTTGTTTGGCTaGAACTGTTTGAATCTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNFTLFG*NCLNLD Trigger: GTCAAGATTCAAACAGTTGCAGCCAAACAAGGTGAA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR GCA 90 bp | TTTTGTAAGGTAGCAGAGCCAGCATTGCCCAACAAATACATTTACTTTAACTCAACTAAAACATTGTGCTaGATCTTCTTCCTAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCKVAEPALPNKYIYFNSTKTLC*IFFLDF Trigger: GAAGTCTAGGAAGAAGATGCAGCACAATGTTTTAGT...TGAGTTAAAGTAAATGTATTTGTTGGGCAATGCTGGCTCTGCTACCTTACAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CCA 90 bp | CTTTTGCCATTTTTGCTACCCAACTTACACAATGCGCAAAGTGCTAATAAGCAATTAACTGTAAATATGTaGCCACTTTCTATCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPFLLPNLHNAQSANKQLTVNM*PLSISL Trigger: CAAGGAGATAGAAAGTGGCCACATATTTACAGTTAA...TTGCTTATTAGCACTTTGCGCATTGTGTAAGTTGGGTAGCAAAAATGGCAAAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CAA 90 bp | CGTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTGCCCACAATTAGAACCAGTTACTaGTGCACCGCCAACACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RTCASTARCTENLSVLPTIRTSY*CTANTN Trigger: GTTGGTGTTGGCGGTGCACAAGTAACTGGTTCTAAT...TGTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS TCA 90 bp | GCATGTCTTGGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTGACTaGGTAGGCCAATATCCCGTTGTGAGAACCCGGACTGTGAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: ACLGAGGMLHFGVAD*VGQYPVVRTRTVRS Trigger: TGATCTCACAGTCCGGGTTCTCACAACGGGATATTGGCCTACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS TCA 90 bp | AAAAGCATGTCTTGGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTaGCTGAGTAGGCCAATATCCCGTTGTGAGAACCCGGACTGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: KSMSWCWWDVALWCG*LSRPISRCENPDCE Trigger: CTCACAGTCCGGGTTCTCACAACGGGATATTGGCCTACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGACATGCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | CGTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCCGTACTGCCCACATCAGGAGACCTAGAGTaGAGGTTTAAGAAATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTCASTARCTENLSVLPTSGDLE*RFKKYS Trigger: CGAGTATTTCTTAAACCTCAACTCTAGGTCTCCTGA...TGTGGGCAGTACGGACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS CCA 90 bp | TTCTATCTCCTTGGACTTGGGTTCTTTTGTGAGGACCCGCTGTGTTaGTTTACCACAGGCGAGGGACTGGAGGGCTCTAACAAGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FYLLGLGFFCEDPLC*FTTGEGLEGSNKFS Trigger: AGAGAACTTGTTAGAGCCCTCCAGTCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTCACAAAAGAACCCAAGTCCAAGGAGATAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGTGTCCCACCGTACCTGTGCAAGCACAGCAAGGTGCACCGAGAACCTGTCGGCAAGCATTTCTTATaGCTCCTCTGTCTACAACTT | + |
|
Preference number: 5 (lower is better) Translates to: ISVPPYLCKHSKVHREPVGKHFL*LLCLQL Trigger: AAGTTGTAGACAGAGGAGCAATAAGAAATGCTTGCC...GACAGGTTCTCGGTGCACCTTGCTGTGCTTGCACAGGTACGGTGGGACACTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS CCA 90 bp | TCTTTTGTGAGGACCCGCTGTGTTGGTTTACCACAGGCGAGGGACTaGAGGGCTCTAACAAGTTCTCTTTCAGGGATATCTGTCTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SFVRTRCVGLPQARD*RALTSSLSGISVSC Trigger: ACAAGAGACAGATATCCCTGAAAGAGAACTTGTTAGAGCCCTCCAGTCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTCACAAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGGTGCTGGTGGGATGTaGCACTTTGGTGTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: KMISTGITLESLKLNQLMGAGGM*HFGVAD Trigger: GTCAGCCACACCAAAGTGCAACATCCCACCAGCACC...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGGTGCTGGTGGGATGTaGCACTTTGGTGTGGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYGAGGM*HFGVAD Trigger: GTCAGCCACACCAAAGTGCAACATCCCACCAGCACC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS GCA 90 bp | GGAGACTTGCAGTATGTGCTTCCGTGTATTAGAACCAGTTACTTGTaGACCGCCAACACCAACCTCAGATCCATCTTCCTTTTTAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDLQYVLPCIRTSYL*TANTNLRSIFLFNW Trigger: CCAGTTAAAAAGGAAGATGGATCTGAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCTAATACACGGAAGCACATACTGCAAGTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR CAA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGGCTCTTCTGTGGATTaGTCAAGGCAGTGCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYGSSVD*SRQCIT Trigger: GGTGATGCACTGCCTTGACAAATCCACAGAAGAGCC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS GCA 90 bp | TCCACCACCTTCACAATAGGCTCTTCTGTGGATTTGTCAAGGCAGTaGATCACCCGCTCTATTTCCTCATTAATCCTAGCTTCTACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: STTFTIGSSVDLSRQ*ITRSISSLILASTF Trigger: GAAAGTAGAAGCTAGGATTAATGAGGAAATAGAGCGGGTGATGCACTGCCTTGACAAATCCACAGAAGAGCCTATTGTGAAGGTGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACCTGGAAAGTGGAGACTaGCAGTATGTGCTTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYLESGD*QYVLPC Trigger: ACACGGAAGCACATACTGCAAGTCTCCACTTTCCAG...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCTGGAAAGTGGAGACTaGCAGTATGTGCTTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: GTVKMISTGITLESLKLNLESGD*QYVLPC Trigger: ACACGGAAGCACATACTGCAAGTCTCCACTTTCCAG...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAAGGCTCTTCTGTGGATTaGTCAAGGCAGTGCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVKMISTGITLESLKLNQGSSVD*SRQCIT Trigger: GGTGATGCACTGCCTTGACAAATCCACAGAAGAGCC...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | GACTTCAGTGATAGTTGGAAGCACAGAGGAACGGACACACAAATCTTCAGCACAATAGTCTTCATGTGCTaGGAAATGAGTTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DFSDSWKHRGTDTQIFSTIVFMC*EMSSLS Trigger: GGAGAGGGAACTCATTTCCAAGCACATGAAGACTAT...TGTGCTGAAGATTTGTGTGTCCGTTCCTCTGTGCTTCCAACTATCACTGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGTCTCAAAAGCATGTCTaGGTGCTGGTGGGATGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: KMISTGITLESLKLNQLMSQKHV*VLVGCC Trigger: GCAACATCCCACCAGCACCAAGACATGCTTTTGAGA...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGTGGGTCGGATTCACCTaGTTTGGCTGCAACTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: KMISTGITLESLKLNQLMWVGFT*FGCNCL Trigger: CAAACAGTTGCAGCCAAACAAGGTGAATCCGACCCA...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACGAATCGAGCCTTCAGTaGCTGAGTTACCTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYESSLQ*LSYLCY Trigger: GTAGCAGAGGTAACTCAGCAACTGAAGGCTCGATTC...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACACCTTTACTGTCTCATGGAAAGGTGGAGAACATGTAGAGATTAAGATCAAGAGCCGGTCATTATaGAAGGATTCTTGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AHTFTVSWKGGEHVEIKIKSRSL*KDSWRK Trigger: CTTCCTCCAAGAATCCTTCAATAATGACCGGCTCTT...GATCTTAATCTCTACATGTTCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAAGAATCGAGCCTTCAGTaGCTGAGTTACCTCTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: TVKMISTGITLESLKLNQESSLQ*LSYLCY Trigger: GTAGCAGAGGTAACTCAGCAACTGAAGGCTCGATTC...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CCA 90 bp | CCAGCAATAGTCTGTTTAAAGAGCCGGTCATTATTGAAGGATTCTTaGAGGAAGCGATCAAACCTACTCTTTAGATCCAATAAGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PAIVCLKSRSLLKDS*RKRSNLLFRSNKPW Trigger: CCAGGGCTTATTGGATCTAAAGAGTAGGTTTGATCGCTTCCTCCAAGAATCCTTCAATAATGACCGGCTCTTTAAACAGACTATTGCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS-3UTR CAA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCATCACCATGGCTGTTaGATGATCATTCCAAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GTVKMISTGITLESLKLNHHHGC*MIIPSL Trigger: CAAGCTTGGAATGATCATCAAACAGCCATGGTGATG...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATATAGTCTTCATGTGCTaGGAAATGAGTTCCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GTVKMISTGITLESLKLNIVFMC*EMSSLS Trigger: GGAGAGGGAACTCATTTCCAAGCACATGAAGACTAT...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATTCTATCTCCTTGGACTaGGGTTCTTTTGTGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDSISLD*GSFVRT Trigger: GGTCCTCACAAAAGAACCCAAGTCCAAGGAGATAGA...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AACAAAACGCGGCACATTCACATTTTCCCGAGGAACTGTAAAGATGATCTCTACCCACTTTCTATCTCCTaGGACTTGGGTTCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: NKTRHIHIFPRNCKDDLYPLSIS*DLGSFV Trigger: CACAAAAGAACCCAAGTCCAAGGAGATAGAAAGTGG...GTAGAGATCATCTTTACAGTTCCTCGGGAAAATGTGAATGTGCCGCGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | GATAAAGCATGCGCCAATTGTATGCCTGGGTCTTTGTATATGTATCAAACCTTTTGGGTCGGATTCACCTaGTTTGGCTGCAACTGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DKACANCMPGSLYMYQTFWVGFT*FGCNCL Trigger: CAAACAGTTGCAGCCAAACAAGGTGAATCCGACCCA...AAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CAA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GTVKMISTGITLESLKLNTYVYT*RSSGVR Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAAAAGAGCCGGTCATTATaGAAGGATTCTTGGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVKMISTGITLESLKLNQKSRSL*KDSWRK Trigger: CTTCCTCCAAGAATCCTTCAATAATGACCGGCTCTT...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACCACTTTCTATCTCCTaGGACTTGGGTTCTTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVKMISTGITLESLKLNQPLSIS*DLGSFV Trigger: CACAAAAGAACCCAAGTCCAAGGAGATAGAAAGTGG...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATCTGGAAAGTGGAGACTaGCAGTATGTGCTTCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNLESGD*QYVLPC Trigger: ACACGGAAGCACATACTGCAAGTCTCCACTTTCCAG...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAAACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TVKMISTGITLESLKLNQTYVYT*RSSGVR Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...TTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGGCAAGCATTTCTTATaGCTCCTCTGTCTACAACTT | + |
|
Preference number: 5 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDGKHFL*LLCLQL Trigger: AAGTTGTAGACAGAGGAGCAATAAGAAATGCTTGCC...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATTCAGGAGACCTAGAGTaGAGGTTTAAGAAATACTCG | + |
|
Preference number: 5 (lower is better) Translates to: KDDLYRDNVGKPEAQSTDSGDLE*RFKKYS Trigger: CGAGTATTTCTTAAACCTCAACTCTAGGTCTCCTGA...ATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTCTCAAAAGCATGTCTaGGTGCTGGTGGGATGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNSQKHV*VLVGCC Trigger: GCAACATCCCACCAGCACCAAGACATGCTTTTGAGA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | GCCCACACCTTTACTGTCTCATGGAAAGGTGGAGAACATGTAGAGATTAAGATCAGGGATATCTGTCTCTaGTTGAATTTCCTCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: AHTFTVSWKGGEHVEIKIRDICL*LNFLKC Trigger: ACATTTGAGGAAATTCAACAAGAGACAGATATCCCT...GATCTTAATCTCTACATGTTCTCCACCTTTCCATGAGACAGTAAAGGTGTGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATATTAGAACCAGTTACTaGTGCACCGCCAACACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNIRTSY*CTANTN Trigger: GTTGGTGTTGGCGGTGCACAAGTAACTGGTTCTAAT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR CAA 90 bp | GGAACTGTAAAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATACACGACTAAATAATTaGTACATGCAAGCAAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: GTVKMISTGITLESLKLNTRLNN*YMQARS Trigger: AGACCTTGCTTGCATGTACAAATTATTTAGTCGTGT...ATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTTTACAGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGATCTCTACAGGGATAACGTTGGAAAGCCTGAAGCTCAATCAACTGATGAGGGATATCTGTCTCTaGTTGAATTTCCTCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: KMISTGITLESLKLNQLMRDICL*LNFLKC Trigger: ACATTTGAGGAAATTCAACAAGAGACAGATATCCCT...CATCAGTTGATTGAGCTTCAGGCTTTCCAACGTTATCCCTGTAGAGATCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTCTATCTCCTTGGACTaGGGTTCTTTTGTGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNSISLD*GSFVRT Trigger: GGTCCTCACAAAAGAACCCAAGTCCAAGGAGATAGA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATGAATCGAGCCTTCAGTaGCTGAGTTACCTCAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNESSLQ*LSYLKC Trigger: ACATTTGAGGTAACTCAGCAACTGAAGGCTCGATTC...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168372.2 |
||
| CDS-3UTR CAA 90 bp | GATAAAGCATGCGCCAATTGTATGCCTGGGTCTTTGTATATGTATCAAACCTTTTGTTCTGTTAGCCCTTaGACTCCCTTTTTCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: DKACANCMPGSLYMYQTFCSVSP*TPFFSL Trigger: TAAACTGAAAAAGGGAGTCAAAGGGCTAACAGAACA...AAAGGTTTGATACATATACAAAGACCCAGGCATACAATTGGCGCATGCTTTATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163119.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATACATATGTGTATACTTaGCGATCCTCAGGTGTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNTYVYT*RSSGVR Trigger: ACGAACACCTGAGGATCGCAAAGTATACACATATGT...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAGAACTTCCCAGTCCATGCGAAGAGTACAGTCCAAGAATAAATCAAATTGTTCTGTTAGCCCTTaGACTCCCTTTTTCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FKRTSQSMRRVQSKNKSNCSVSP*TPFFSL Trigger: TAAACTGAAAAAGGGAGTCAAAGGGCTAACAGAACA...ATTTGATTTATTCTTGGACTGTACTCTTCGCATGGACTGGGAAGTTCTTTTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS CCA 72 bp | CATCTTCTCGCACCGGAAAGGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HLLAPERPGSAS*CPSGCPCLCSD Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGGTGCGAGAAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164108.8 |
||
| CDS CCA 72 bp | CATCCATGGTCATCGGAAAGGCCCGGATCCGCATCTTaGTGTCCTTCCGGCTGCCCGTGCCTTTGCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: HPWSSERPGSAS*CPSGCPCLCSD Trigger: ATCTGAGCAAAGGCACGGGCAGCCGGAAGGACACCAAGATGCGGATCCGGGCCTTTCCGATGACCATGGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000170897.8 |
||
| CDS TCA 72 bp | GGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTGACTaGGTAGGCCAATATCCCGTTGTGAGAACCCGGACT | + |
|
Preference number: 6 (lower is better) Translates to: GAGGMLHFGVAD*VGQYPVVRTRT Trigger: AGTCCGGGTTCTCACAACGGGATATTGGCCTACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CCA 72 bp | CTTGGACTTGGGTTCTTTTGTGAGGACCCGCTGTGTTaGTTTACCACAGGCGAGGGACTGGAGGGCTCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLGFFCEDPLC*FTTGEGLEGSN Trigger: GTTAGAGCCCTCCAGTCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTCACAAAAGAACCCAAGTCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS TCA 72 bp | TCTTGGTGCTGGTGGGATGTTGCACTTTGGTGTGGCTaGCTGAGTAGGCCAATATCCCGTTGTGAGAACCCG | + |
|
Preference number: 6 (lower is better) Translates to: SWCWWDVALWCG*LSRPISRCENP Trigger: CGGGTTCTCACAACGGGATATTGGCCTACTCAGTCAGCCACACCAAAGTGCAACATCCCACCAGCACCAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS TCA 72 bp | GGCCACTTTCTATCTCCTTGGACTTGGGTTCTTTTGTaGGGACCCGCTGTGTTGGTTTACCACAGGCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GHFLSPWTWVLL*GPAVLVYHRRG Trigger: CCCTCGCCTGTGGTAAACCAACACAGCGGGTCCTCACAAAAGAACCCAAGTCCAAGGAGATAGAAAGTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CCA 72 bp | AGGACCCGCTGTGTTGGTTTACCACAGGCGAGGGACTaGAGGGCTCTAACAAGTTCTCTTTCAGGGATATCT | + |
|
Preference number: 6 (lower is better) Translates to: RTRCVGLPQARD*RALTSSLSGIS Trigger: AGATATCCCTGAAAGAGAACTTGTTAGAGCCCTCCAGTCCCTCGCCTGTGGTAAACCAACACAGCGGGTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CAA 72 bp | CTCTCCACCACCTTCACAATAGGCTCTTCTGTGGATTaGTCAAGGCAGTGCATCACCCGCTCTATTTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSTTFTIGSSVD*SRQCITRSISS Trigger: TGAGGAAATAGAGCGGGTGATGCACTGCCTTGACAAATCCACAGAAGAGCCTATTGTGAAGGTGGTGGAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS GCA 72 bp | ACACCACCTAAAGAGACCCCCGTTGCCTGTAGATGTTaGCTGAACTCATCCATAGTTGTGTTTGAGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPPKETPVACRC*LNSSIVVFEML Trigger: GAGCATCTCAAACACAACTATGGATGAGTTCAGGCAACATCTACAGGCAACGGGGGTCTCTTTAGGTGGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CAA 90 bp | ATGAGTTCCCTCTCCACCACCTTCACAATAGGCTCTTCTGTGGATTaGTCAAGGCAGTGCATCACCCGCTCTATTTCCTCATTAATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: MSSLSTTFTIGSSVD*SRQCITRSISSLIL Trigger: TAGGATTAATGAGGAAATAGAGCGGGTGATGCACTGCCTTGACAAATCCACAGAAGAGCCTATTGTGAAGGTGGTGGAGAGGGAACTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS GCA 72 bp | CAGTATGTGCTTCCGTGTATTAGAACCAGTTACTTGTaGACCGCCAACACCAACCTCAGATCCATCTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QYVLPCIRTSYL*TANTNLRSIFL Trigger: AAGGAAGATGGATCTGAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCTAATACACGGAAGCACATACTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS CAA 72 bp | TTGCAGTATGTGCTTCCGTGTATTAGAACCAGTTACTaGTGCACCGCCAACACCAACCTCAGATCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQYVLPCIRTSY*CTANTNLRSIF Trigger: GAAGATGGATCTGAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCTAATACACGGAAGCACATACTGCAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS CAA 90 bp | AGTGGAGACTTGCAGTATGTGCTTCCGTGTATTAGAACCAGTTACTaGTGCACCGCCAACACCAACCTCAGATCCATCTTCCTTTTTAAC | + |
|
Preference number: 6 (lower is better) Translates to: SGDLQYVLPCIRTSY*CTANTNLRSIFLFN Trigger: GTTAAAAAGGAAGATGGATCTGAGGTTGGTGTTGGCGGTGCACAAGTAACTGGTTCTAATACACGGAAGCACATACTGCAAGTCTCCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS GCA 72 bp | AATATGGTCATCTGGAAAGTGGAGACTTGCAGTATGTaGTTCCGTGTATTAGAACCAGTTACTTGTGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: NMVIWKVETCSM*FRVLEPVTCAP Trigger: CGGTGCACAAGTAACTGGTTCTAATACACGGAAGCACATACTGCAAGTCTCCACTTTCCAGATGACCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
||
| CDS GCA 72 bp | TTCACAATAGGCTCTTCTGTGGATTTGTCAAGGCAGTaGATCACCCGCTCTATTTCCTCATTAATCCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: FTIGSSVDLSRQ*ITRSISSLILA Trigger: AGCTAGGATTAATGAGGAAATAGAGCGGGTGATGCACTGCCTTGACAAATCCACAGAAGAGCCTATTGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CAA 72 bp | TCCCCAGCAATAGTCTGTTTAAAGAGCCGGTCATTATaGAAGGATTCTTGGAGGAAGCGATCAAACCTACTC | + |
|
Preference number: 6 (lower is better) Translates to: SPAIVCLKSRSL*KDSWRKRSNLL Trigger: GAGTAGGTTTGATCGCTTCCTCCAAGAATCCTTCAATAATGACCGGCTCTTTAAACAGACTATTGCTGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CAA 72 bp | ACTGTAAATATGTGGCCACTTTCTATCTCCTTGGACTaGGGTTCTTTTGTGAGGACCCGCTGTGTTGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TVNMWPLSISLD*GSFVRTRCVGL Trigger: TAAACCAACACAGCGGGTCCTCACAAAAGAACCCAAGTCCAAGGAGATAGAAAGTGGCCACATATTTACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
||
| CDS CAA 90 bp | TACTCGAAGTCCCCAGCAATAGTCTGTTTAAAGAGCCGGTCATTATaGAAGGATTCTTGGAGGAAGCGATCAAACCTACTCTTTAGATCC | + |
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Preference number: 6 (lower is better) Translates to: YSKSPAIVCLKSRSL*KDSWRKRSNLLFRS Trigger: GGATCTAAAGAGTAGGTTTGATCGCTTCCTCCAAGAATCCTTCAATAATGACCGGCTCTTTAAACAGACTATTGCTGGGGACTTCGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS CAA 72 bp | TCATTAACTGTAAATATGTGGCCACTTTCTATCTCCTaGGACTTGGGTTCTTTTGTGAGGACCCGCTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: SLTVNMWPLSIS*DLGSFVRTRCV Trigger: AACACAGCGGGTCCTCACAAAAGAACCCAAGTCCAAGGAGATAGAAAGTGGCCACATATTTACAGTTAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS CAA 90 bp | TGTACTAGCCCAGAATTTTCCATTTCTACAATAGTCTTCATGTGCTaGGAAATGAGTTCCCTCTCCACCACCTTCACAATAGGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CTSPEFSISTIVFMC*EMSSLSTTFTIGSS Trigger: AGAAGAGCCTATTGTGAAGGTGGTGGAGAGGGAACTCATTTCCAAGCACATGAAGACTATTGTAGAAATGGAAAATTCTGGGCTAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS CAA 72 bp | CCAGAATTTTCCATTTCTACAATAGTCTTCATGTGCTaGGAAATGAGTTCCCTCTCCACCACCTTCACAATA | + |
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Preference number: 6 (lower is better) Translates to: PEFSISTIVFMC*EMSSLSTTFTI Trigger: TATTGTGAAGGTGGTGGAGAGGGAACTCATTTCCAAGCACATGAAGACTATTGTAGAAATGGAAAATTCTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS GCA 72 bp | TACATATGTGTATACTTTGCGATCCTCAGGTGTTCGTaGCAAATATTCTCTCTCAATAAGTCCTTCAATACG | + |
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Preference number: 6 (lower is better) Translates to: YICVYFAILRCS*QIFSLNKSFNT Trigger: CGTATTGAAGGACTTATTGAGAGAGAATATTTGGCACGAACACCTGAGGATCGCAAAGTATACACATATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 ENSMUST00000168372.2 |
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| CDS CAA 72 bp | ATGGTCTTCAAACCATTTGGCACACGACTAAATAATTaGTACATGCAAGCAAGGTCTTCTGTCTTTCCATTT | + |
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Preference number: 6 (lower is better) Translates to: MVFKPFGTRLNN*YMQARSSVFPF Trigger: AAATGGAAAGACAGAAGACCTTGCTTGCATGTACAAATTATTTAGTCGTGTGCCAAATGGTTTGAAGACCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS CAA 72 bp | TCAATAAATAATGAGAGGTATTCAGGAGACCTAGAGTaGAGGTTTAAGAAATACTCGAAGTCCCCAGCAATA | + |
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Preference number: 6 (lower is better) Translates to: SINNERYSGDLE*RFKKYSKSPAI Trigger: TATTGCTGGGGACTTCGAGTATTTCTTAAACCTCAACTCTAGGTCTCCTGAATACCTCTCATTATTTATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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| CDS CAA 90 bp | AGTTTATCATCAATAAATAATGAGAGGTATTCAGGAGACCTAGAGTaGAGGTTTAAGAAATACTCGAAGTCCCCAGCAATAGTCTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: SLSSINNERYSGDLE*RFKKYSKSPAIVCL Trigger: TAAACAGACTATTGCTGGGGACTTCGAGTATTTCTTAAACCTCAACTCTAGGTCTCCTGAATACCTCTCATTATTTATTGATGATAAACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163119.8 ENSMUST00000164108.8 |
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