Pregenerated sensors for CUEDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018378Ensembl transcript IDs: ENSMUST00000018522.13, ENSMUST00000154812.8
Found 197 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCAGTGGCTGGGCTGGGCTGTGTGGCTGAAGAAGCCTGAGCCTTaGTGTGCGAGCACCGTCTGTCTGGGCTGCAGCTGGAGGGCACTG | + |
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Preference number: 1 (lower is better) Translates to: RQWLGWAVWLKKPEP*CASTVCLGCSWRAL Trigger: CAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | AGGGCCCAGACACGTCTGGAGCTCAGTTTAGCCTCCCGGGGCTCCTaGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: RAQTRLELSLASRGS*RWGAVFLSRVHGPG Trigger: GCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGGAGGCTAAACTGAGCTCCAGACGTGTCTGGGCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR GCA 90 bp | GGTGTGCGAGCACCGTCTGTCTGGGCTGCAGCTGGAGGGCACTGGTaGTGCTCTCTGGTTGCCCCCACCCAGTCAGAGCATCTCTGGCAA | + |
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Preference number: 1 (lower is better) Translates to: GVRAPSVWAAAGGHW*CSLVAPTQSEHLWQ Trigger: TTGCCAGAGATGCTCTGACTGGGTGGGGGCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCGCACACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR GCA 90 bp | CTGAAGAAGCCTGAGCCTTGGTGTGCGAGCACCGTCTGTCTGGGCTaGAGCTGGAGGGCACTGGTGCTGCTCTCTGGTTGCCCCCACCCA | + |
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Preference number: 1 (lower is better) Translates to: LKKPEPWCASTVCLG*SWRALVLLSGCPHP Trigger: TGGGTGGGGGCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTTCTTCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR GCA 90 bp | AAATGGTCAGCGCGTTCCCAGGTCGTGGGGCGAGCGGGACACGGGTaGGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: KWSARSQVVGRAGHG*GLRPVAVVGAGSLN Trigger: ATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCACCCGTGTCCCGCTCGCCCCACGACCTGGGAACGCGCTGACCATTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | AAGCCTGAGCCTTGGTGTGCGAGCACCGTCTGTCTGGGCTGCAGCTaGAGGGCACTGGTGCTGCTCTCTGGTTGCCCCCACCCAGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: KPEPWCASTVCLGCS*RALVLLSGCPHPVR Trigger: TCTGACTGGGTGGGGGCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | CAGACACGTCTGGAGCTCAGTTTAGCCTCCCGGGGCTCCTGGAGGTaGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAG | + |
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Preference number: 1 (lower is better) Translates to: QTRLELSLASRGSWR*GAVFLSRVHGPGSE Trigger: CTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGGAGGCTAAACTGAGCTCCAGACGTGTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR TCA 90 bp | GTCCTGTCTGTGGAAAGCGGCAGTGGCTGGGCTGGGCTGTGTGGCTaGAGAAGCCTGAGCCTTGGTGTGCGAGCACCGTCTGTCTGGGCT | + |
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Preference number: 1 (lower is better) Translates to: VLSVESGSGWAGLCG*RSLSLGVRAPSVWA Trigger: AGCCCAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | CTAAGTCCTGTCTGTGGAAAGCGGCAGTGGCTGGGCTGGGCTGTGTaGCTGAAGAAGCCTGAGCCTTGGTGTGCGAGCACCGTCTGTCTG | + |
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Preference number: 1 (lower is better) Translates to: LSPVCGKRQWLGWAV*LKKPEPWCASTVCL Trigger: CAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGACTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | CTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGTGGCTGGGCTaGGCTGTGTGGCTGAAGAAGCCTGAGCCTTGGTGTGCGAGCACC | + |
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Preference number: 1 (lower is better) Translates to: LKVLSPVCGKRQWLG*AVWLKKPEPWCAST Trigger: GGTGCTCGCACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGACTTAGAACTTTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | GGAAGGCCGCAGCGGCTTGGGGGAGGGTATAGATCGGACCCACTGTaGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: GRPQRLGGGYRSDPL*QVRRDRKETELSSG Trigger: GCCTGAAGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCTATACCCTCCCCCAAGCCGCTGCGGCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR TCA 90 bp | GTCACTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTaGCAGCCAGCCCTTAATAGAAGCAGCCCTATAAACTGGACCCGA | + |
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Preference number: 1 (lower is better) Translates to: VTLPIPAGSNGGCWR*QPALNRSSPINWTR Trigger: TCGGGTCCAGTTTATAGGGCTGCTTCTATTAAGGGCTGGCTGTCACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | GGAAGTCTTCCTCGTAAGCATGGCCCTCCACGTCATCCAGGAGGTTaGCTGTGGATGCAGCAGCCCCCAGCGACTGAAGCTTCGGTAAAT | + |
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Preference number: 1 (lower is better) Translates to: GSLPRKHGPPRHPGG*LWMQQPPATEASVN Trigger: ATTTACCGAAGCTTCAGTCGCTGGGGGCTGCTGCATCCACAGCCAACCTCCTGGATGACGTGGAGGGCCATGCTTACGAGGAAGACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | CACTGGTGCTGCTCTCTGGTTGCCCCCACCCAGTCAGAGCATCTCTaGCAAGGTGAAGCTGCTGGCACCTCTTACTGTCCTTCTCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: HWCCSLVAPTQSEHL*QGEAAGTSYCPSLR Trigger: CCTAAGAGAAGGACAGTAAGAGGTGCCAGCAGCTTCACCTTGCCAGAGATGCTCTGACTGGGTGGGGGCAACCAGAGAGCAGCACCAGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | TTCCTGCATTTCTGCTCATCCCCTATAGAGGAGCCAGACTACAAATaGGGTTTGTGGCTGGCTGGCTGCTGTCTCGAAGGCTCCAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: FLHFCSSPIEEPDYK*GLWLAGCCLEGSRP Trigger: GGGCCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGATGAGCAGAAATGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | CTTCCTCGTAAGCATGGCCCTCCACGTCATCCAGGAGGTTGGCTGTaGATGCAGCAGCCCCCAGCGACTGAAGCTTCGGTAAATGTTTCT | + |
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Preference number: 1 (lower is better) Translates to: LPRKHGPPRHPGGWL*MQQPPATEASVNVS Trigger: AGAAACATTTACCGAAGCTTCAGTCGCTGGGGGCTGCTGCATCCACAGCCAACCTCCTGGATGACGTGGAGGGCCATGCTTACGAGGAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR CCA 90 bp | CCTCCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCTGTaGAAAGCGGCAGTGGCTGGGCTGGGCTGTGTGGCTGAAGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: PPPIISSSESSKSCL*KAAVAGLGCVAEEA Trigger: GGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGGAGGGCGCCCGGCCTTaGAGCAGGGAGGGCCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: LQGSRAWLGANVVPTPTREGARP*SREGPD Trigger: GTCTGGGCCCTCCCTGCTCCAAGGCCGGGCGCCCTC...CCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGTGTGGAAAGCGGCAGTaGCTGGGCTGGGCTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: SPGFTGLARSQRGPHPHPCGKRQ*LGWAVW Trigger: CCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACA...CGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGTCTCCCCATCCCGGCTaGGTCAAATGGAGGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LQGSRAWLGANVVPTPTRSPHPG*VKWRLL Trigger: CAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGA...CCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGACCTTAGGCACCTCCTaGCGCCTACCCCGGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: SPGFTGLARSQRGPHPHPTLGTS*RLPRKS Trigger: AGACTTCCGGGGTAGGCGGCAGGAGGTGCCTAAGGT...CGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CCGCAGGAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCGGCTCGGAGCCAACGTaGTCCCCACCCCCACCCGGA | + |
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Preference number: 2 (lower is better) Translates to: PQELRRLRSHAHQAPIFCGSEPT*SPPPPG Trigger: TCCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCC...GCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCCAGGAGGTTGGCTGTaGATGCAGCAGCCCCCAGCG | + |
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Preference number: 2 (lower is better) Translates to: GAPGGGELSFSPGFTGLAPGGWL*MQQPPA Trigger: CGCTGGGGGCTGCTGCATCCACAGCCAACCTCCTGG...AGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR-3UTR TCA 90 bp | CCCGGGGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGTCTGGTCTCTCCACCTaGGGCACCCGGCAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: PGAPGGGELSFSPGFTGLSGLST*GTRQVL Trigger: GAGAACTTGCCGGGTGCCTCAGGTGGAGAGACCAGA...CAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGACCGTCTGTCTGGGCTaGAGCTGGAGGGCACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GSWRWGAVFLSRVHGPGSTVCLG*SWRALV Trigger: CACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGT...CGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTGACAGCCAGCCCCGGCAGTGGCTGGGCTaGGCTGTGTGGCTGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSPSRLGQMEAAGGDSQPRQWLG*AVWLKK Trigger: CTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCG...GGGCTGGCTGTCACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCAGTCCCCGACAAGGCTaGGGTGCAGGAGACCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CLSLQGSRAWLGANVVPTSPRQG*GAGDLG Trigger: CCCAAGGTCTCCTGCACCTCAGCCTTGTCGGGGACT...GGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATCGCCTCTGCGAGCACCGTCTGTCTaGGCTGCAGCTGGAGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: VRPPSRGSGWCRFLKSPLRAPSV*AAAGGH Trigger: GTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCG...CAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGACTGGCTGCGCACGCTTTCCCGTGGCAGTGGTTaGTGCAGGTTCCTTAAATCG | + |
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Preference number: 2 (lower is better) Translates to: LARSQRGPHPHPDWLRTLSRGSG*CRFLKS Trigger: CGATTTAAGGAACCTGCACCAACCACTGCCACGGGA...AAGCGTGCGCAGCCAGTCCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTGACAGCCAGCCCCGTCATCCAGGAGGTTaGCTGTGGATGCAGCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPSRLGQMEAAGGDSQPRHPGG*LWMQQP Trigger: GGGCTGCTGCATCCACAGCCAACCTCCTGGATGACG...GGGCTGGCTGTCACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTGGAGGCTGCTGGAGGTaGCAGCCAGCCCTTAATAGA | + |
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Preference number: 2 (lower is better) Translates to: GAPGGGELSFSPGFTGLAGGCWR*QPALNR Trigger: TCTATTAAGGGCTGGCTGTCACCTCCAGCAGCCTCC...AGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATCGCCTCTGACCGTCTGTCTGGGCTaGAGCTGGAGGGCACTGGTG | + |
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Preference number: 2 (lower is better) Translates to: VRPPSRGSGWCRFLKSPLTVCLG*SWRALV Trigger: CACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGT...CAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GGGACACGGGTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATTGTGGCTGGCTGGCTaGTGTCTCGAAGGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GTRVRPPSRGSGWCRFLKLWLAG*CLEGSR Trigger: CCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAA...TTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCACCCGTGTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGCGTTTGCGGTCCCATaGCCACCAGGCTCCCATTTT | + |
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Preference number: 2 (lower is better) Translates to: GSWRWGAVFLSRVHGPGSAFAVP*PPGSHF Trigger: AAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGC...CGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATCGCCTCTGGAGGTTGGCTGTGGATaGAGCAGCCCCCAGCGACTG | + |
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Preference number: 2 (lower is better) Translates to: VRPPSRGSGWCRFLKSPLEVGCG*SSPQRL Trigger: CAGTCGCTGGGGGCTGCTGCATCCACAGCCAACCTC...CAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTGACAGCCAGCCCGCAGCCCCCAGCGACTaGAGCTTCGGTAAATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: LSPSRLGQMEAAGGDSQPAAPSD*SFGKCF Trigger: GAAACATTTACCGAAGCTTCAGTCGCTGGGGGCTGC...GGGCTGGCTGTCACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTAGTTCTCGTTCTAGGTaGTTGCCGCTCTGCCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: GELSFSPGFTGLARSQRGSSRSR*LPLCRG Trigger: GCCTCGGCAGAGCGGCAAGCACCTAGAACGAGAACT...ACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCGGGGTCACTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTGCAGTCAGAGCATCTCTaGCAAGGTGAAGCTGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LRGHSPHPGWVKWRLLEVQSEHL*QGEAAG Trigger: GCCAGCAGCTTCACCTTGCCAGAGATGCTCTGACTG...CACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAGTGACCCCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCCAGTGTGGAAAGCGGCAGTaGCTGGGCTGGGCTGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: QELRRLRSHAHQAPIFCQCGKRQ*LGWAVW Trigger: CCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACA...CTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACTACAAATGGGGTTTGTaGCTGGCTGGCTGCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: FSPGFTGLARSQRGPHPHYKWGL*LAGCCL Trigger: GAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTA...GTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTGCATCTCTGGCAAGGTaGAGCTGCTGGCACCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: GELSFSPGFTGLARSQRGASLAR*SCWHLL Trigger: TAAGAGGTGCCAGCAGCTTCACCTTGCCAGAGATGC...ACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCCAGTCCTTGTGGCTGGCTGGCTaGTGTCTCGAAGGCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: ELRRLRSHAHQAPIFCQSLWLAG*CLEGSR Trigger: CCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAA...GGACTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTGACACACACACAAACCTAGGGCTTCCCCGAGGGCGCCCGGCCTTGGAGAGTTCTCGTTCTAGGTaGTTGCCGCTCTGCCGAGGC | + |
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Preference number: 2 (lower is better) Translates to: QSDTHTNLGLPRGRPALESSRSR*LPLCRG Trigger: GCCTCGGCAGAGCGGCAAGCACCTAGAACGAGAACT...CTCCAAGGCCGGGCGCCCTCGGGGAAGCCCTAGGTTTGTGTGTGTGTCACTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTGACACACACACAAACCTAGGGCTTCCCCGAGGGCGCCCGGCCTTGGAGCAGGCTCCCATTTTCTaGCAGTCCTTAGCAGCCCCC | + |
|
Preference number: 2 (lower is better) Translates to: QSDTHTNLGLPRGRPALEQAPIF*QSLAAP Trigger: GGGGGCTGCTAAGGACTGGCAGAAAATGGGAGCCTG...CTCCAAGGCCGGGCGCCCTCGGGGAAGCCCTAGGTTTGTGTGTGTGTCACTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCGAGCCAGACTACAAATaGGGTTTGTGGCTGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: CLSLQGSRAWLGANVVPTEPDYK*GLWLAG Trigger: GCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTC...GGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCCAGGGAGGCTGCTGGAGGTaGCAGCCAGCCCTTAATAGA | + |
|
Preference number: 2 (lower is better) Translates to: QELRRLRSHAHQAPIFCQGGCWR*QPALNR Trigger: TCTATTAAGGGCTGGCTGTCACCTCCAGCAGCCTCC...CTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR GCA 90 bp | CAAAGTGACACACACACAAACCTAGGGCTTCCCCGAGGGCGCCCGGCCTTGGAGGTGTCCAGAGTTCCGTaGAGGGTTGGAGCCAAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: QSDTHTNLGLPRGRPALEVSRVP*RVGAKS Trigger: ACTCTTGGCTCCAACCCTGCACGGAACTCTGGACAC...CTCCAAGGCCGGGCGCCCTCGGGGAAGCCCTAGGTTTGTGTGTGTGTCACTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCTCCCGTGGCAGTGGTTaGTGCAGGTTCCTTAAATCG | + |
|
Preference number: 2 (lower is better) Translates to: SCLSLQGSRAWLGANVVPSRGSG*CRFLKS Trigger: CGATTTAAGGAACCTGCACCAACCACTGCCACGGGA...GGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGAAAGAATAACAAAGTaGCACACACACAAACCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPGFTGLARSQRGPHPHPERITK*HTHKPR Trigger: CCTAGGTTTGTGTGTGTGTCACTTTGTTATTCTTTC...CGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTATAGAGGAGCCAGACTACAAATGGGGTTTGTGGCTGGCTGGCTGCTGTCTGCTGGGCTGTGTGGCTaGAGAAGCCTGAGCCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PYRGARLQMGFVAGWLLSAGLCG*RSLSLG Trigger: ACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGC...AGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCACTTGCACGTCAGTCTaGACCTTTTCATTTGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: CLSLQGSRAWLGANVVPTTCTSV*TFSFGV Trigger: GACCCCAAATGAAAAGGTGCAGACTGACGTGCAAGT...GGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCGGACCCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTCGAGCACCGTCTGTCTaGGCTGCAGCTGGAGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RSDPLWQVRRDRKETELSRAPSV*AAAGGH Trigger: GTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCG...AGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTTGTCAGTTCCTAACAGTCCCCGACAAGGCTaGGGTGCAGGAGACCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NSLQAQRISTWVILSVPNSPRQG*GAGDLG Trigger: CCCAAGGTCTCCTGCACCTCAGCCTTGTCGGGGACT...GTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCGGACCCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTCAGTCAGAGCATCTCTaGCAAGGTGAAGCTGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RSDPLWQVRRDRKETELSQSEHL*QGEAAG Trigger: GCCAGCAGCTTCACCTTGCCAGAGATGCTCTGACTG...AGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | AGATCGGACCCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTTACAAATGGGGTTTGTaGCTGGCTGGCTGCTGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: RSDPLWQVRRDRKETELSYKWGL*LAGCCL Trigger: GAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTA...AGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTACTTGCACGTCAGTCTaGACCTTTTCATTTGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPTCTSV*TFSFGV Trigger: GACCCCAAATGAAAAGGTGCAGACTGACGTGCAAGT...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGAGCCAGACTACAAATaGGGTTTGTGGCTGGCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PPIISSSESSKSCLWKAAEPDYK*GLWLAG Trigger: GCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTC...TGCCGCTTTCCACAGACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTCAAAGAATCTCCACATaGGTCATCTTGTCAGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPQRIST*VILSVP Trigger: AGGAACTGACAAGATGACCCATGTGGAGATTCTTTG...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CAA 90 bp | AAACCGAACTCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTaGTCAGTTCCTAACTGGAACCTTGGGATCCTTCTTCTTCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KPNSLQAQRISTWVI*SVPNWNLGILLLPL Trigger: GAGAGGAAGAAGAAGGATCCCAAGGTTCCAGTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGAGTTCGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CAA 90 bp | AAAGAATCTCCACATGGGTCATCTTGTCAGTTCCTAACTGGAACCTaGGGATCCTTCTTCTTCCTCTCTTTCTTTCTTTCTTTCTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: KESPHGSSCQFLTGT*GSFFFLSFFLSFFL Trigger: CAGAAAGAAAGAAAGAAAGAAAGAGAGGAAGAAGAAGGATCCCAAGGTTCCAGTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR TCA 72 bp | TCCGAGCCCGGGGAAGCTCGACTGACCCGCAGGAGTTaGGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SEPGEARLTRRS*GVCGPMPTRLP Trigger: TGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTGCGGGTCAGTCGAGCTTCCCCGGGCTCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CCTTGGTGTGCGAGCACCGTCTGTCTGGGCTGCAGCTaGAGGGCACTGGTGCTGCTCTCTGGTTGCCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PWCASTVCLGCS*RALVLLSGCPH Trigger: GTGGGGGCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCGCACACCAAGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR GCA 72 bp | CCGTCTGTCTGGGCTGCAGCTGGAGGGCACTGGTGCTaGTCTCTGGTTGCCCCCACCCAGTCAGAGCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: PSVWAAAGGHWC*SLVAPTQSEHL Trigger: GAGATGCTCTGACTGGGTGGGGGCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR GCA 72 bp | GCACCGTCTGTCTGGGCTGCAGCTGGAGGGCACTGGTaGTGCTCTCTGGTTGCCCCCACCCAGTCAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: APSVWAAAGGHW*CSLVAPTQSEH Trigger: ATGCTCTGACTGGGTGGGGGCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR GCA 72 bp | CCTGAGCCTTGGTGTGCGAGCACCGTCTGTCTGGGCTaGAGCTGGAGGGCACTGGTGCTGCTCTCTGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PEPWCASTVCLG*SWRALVLLSGC Trigger: GCAACCAGAGAGCAGCACCAGTGCCCTCCAGCTGCAGCCCAGACAGACGGTGCTCGCACACCAAGGCTCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CTGGGCTGGGCTGTGTGGCTGAAGAAGCCTGAGCCTTaGTGTGCGAGCACCGTCTGTCTGGGCTGCAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGWAVWLKKPEP*CASTVCLGCSW Trigger: CCAGCTGCAGCCCAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGCCCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATCGCCTCTGGAAGGCCGCAGCGGCTaGGGGGAGGGTATAGATCGG | + |
|
Preference number: 3 (lower is better) Translates to: VRPPSRGSGWCRFLKSPLEGRSG*GEGIDR Trigger: CCGATCTATACCCTCCCCCAAGCCGCTGCGGCCTTC...CAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR GCA 72 bp | CGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTaGCAGTCCTTAGCAGCCCCCACCACCCACGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: RLRSHAHQAPIF*QSLAAPTTHAS Trigger: CGATGCGTGGGTGGTGGGGGCTGCTAAGGACTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | GGGACACGGGTGCGGCCTCCGTCCCGTGGCAGTGGTTaGTGCAGGTTCCTTAAATCGCCTCTGGTCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GTRVRPPSRGSG*CRFLKSPLVSP Trigger: TGGAGAGACCAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCACCCGTGTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CTGGAGCTCAGTTTAGCCTCCCGGGGCTCCTGGAGGTaGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LELSLASRGSWR*GAVFLSRVHGP Trigger: AGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGGAGGCTAAACTGAGCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCGGGGTCACTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTGGACTACAAATGGGGTTaGTGGCTGGCTGGCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LRGHSPHPGWVKWRLLEVDYKWG*WLAGCC Trigger: ACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTC...CACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAGTGACCCCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCGAGTTCCGTGCAGGGTaGGAGCCAAGAGTCAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: CLSLQGSRAWLGANVVPTEFRAG*EPRVSS Trigger: ACTGCTGACTCTTGGCTCCAACCCTGCACGGAACTC...GGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CCTCGTAAGCATGGCCCTCCACGTCATCCAGGAGGTTaGCTGTGGATGCAGCAGCCCCCAGCGACTGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRKHGPPRHPGG*LWMQQPPATEA Trigger: AGCTTCAGTCGCTGGGGGCTGCTGCATCCACAGCCAACCTCCTGGATGACGTGGAGGGCCATGCTTACGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | AGAGGAGCCAGACTACAAATGGGGTTTGTGGCTGGCTaGCTGCTGTCTCGAAGGCTCCAGGCCCCTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RGARLQMGFVAG*LLSRRLQAPPP Trigger: TGGAGGAGGGGCCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | ACACGTCTGGAGCTCAGTTTAGCCTCCCGGGGCTCCTaGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TRLELSLASRGS*RWGAVFLSRVH Trigger: GTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGGAGGCTAAACTGAGCTCCAGACGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR GCA 72 bp | GAGCCAGACTACAAATGGGGTTTGTGGCTGGCTGGCTaGTGTCTCGAAGGCTCCAGGCCCCTCCTCCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: EPDYKWGLWLAG*CLEGSRPLLQS Trigger: TGATTGGAGGAGGGGCCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CTAAGTCCTGTCTGTGGAAAGCGGCAGTGGCTGGGCTaGGCTGTGTGGCTGAAGAAGCCTGAGCCTTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSPVCGKRQWLG*AVWLKKPEPWC Trigger: ACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGACTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | TCCCCTATAGAGGAGCCAGACTACAAATGGGGTTTGTaGCTGGCTGGCTGCTGTCTCGAAGGCTCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SPIEEPDYKWGL*LAGCCLEGSRP Trigger: GGGCCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | TGCTCTCTGGTTGCCCCCACCCAGTCAGAGCATCTCTaGCAAGGTGAAGCTGCTGGCACCTCTTACTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CSLVAPTQSEHL*QGEAAGTSYCP Trigger: AGGACAGTAAGAGGTGCCAGCAGCTTCACCTTGCCAGAGATGCTCTGACTGGGTGGGGGCAACCAGAGAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATCGCCTCTGTCCACATGGGTCATCTaGTCAGTTCCTAACTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: VRPPSRGSGWCRFLKSPLSTWVI*SVPNWN Trigger: GTTCCAGTTAGGAACTGACAAGATGACCCATGTGGA...CAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR TCA 72 bp | CCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTaGCAGCCAGCCCTTAATAGAAGCAGCCCTATAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PIPAGSNGGCWR*QPALNRSSPIN Trigger: GTTTATAGGGCTGCTTCTATTAAGGGCTGGCTGTCACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGTaGCTGGGCTGGGCTGTGTGGCTGAAGAAGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKVLSPVCGKRQ*LGWAVWLKKPE Trigger: CTCAGGCTTCTTCAGCCACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGACTTAGAACTTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | CAGCGGCTTGGGGGAGGGTATAGATCGGACCCACTGTaGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: QRLGGGYRSDPL*QVRRDRKETEL Trigger: GAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCTATACCCTCCCCCAAGCCGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CCA 72 bp | TTCTGCTCATCCCCTATAGAGGAGCCAGACTACAAATaGGGTTTGTGGCTGGCTGGCTGCTGTCTCGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FCSSPIEEPDYK*GLWLAGCCLEG Trigger: GCCTTCGAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGATGAGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGAGGCTGGCAACTTCGGCAACTTGCACGTCAGTCTGCACCTTTTCATTTGGGTCCACATGGGTCATCTaGTCAGTTCCTAACTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: PRLATSATCTSVCTFSFGSTWVI*SVPNWN Trigger: GTTCCAGTTAGGAACTGACAAGATGACCCATGTGGA...CCCAAATGAAAAGGTGCAGACTGACGTGCAAGTTGCCGAAGTTGCCAGCCTCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGACTACAAATGGGGTTaGTGGCTGGCTGGCTGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PPIISSSESSKSCLWKAADYKWG*WLAGCC Trigger: ACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTC...TGCCGCTTTCCACAGACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTTTCCTAACTGGAACCTaGGGATCCTTCTTCTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPFLTGT*GSFFFL Trigger: GAGGAAGAAGAAGGATCCCAAGGTTCCAGTTAGGAA...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGCCGGCCGGCTGTTGTTaGGCTCCTGAGGGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGFTGLARSQRGPHPHPPAGCC*APEGQC Trigger: GCACTGCCCCTCAGGAGCTCAACAACAGCCGGCCGG...CGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGCTCCTGAGGGGCAGTaGTGCCATCTCCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGFTGLARSQRGPHPHPAPEGQ*CHLQPL Trigger: CAGGGGCTGGAGATGGCAGCACTGCCCCTCAGGAGC...CGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | CTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGCTGTTGTTGAGCTCCTaGGGGGCAGTGCTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQGSRAWLGANVVPTPTRLLLSS*GAVLPS Trigger: AGATGGCAGCACTGCCCCTCAGGAGCTCAACAACAG...CCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGCCGGCCGGCTGTTGTTaGGCTCCTGAGGGGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSWRWGAVFLSRVHGPGSPAGCC*APEGQC Trigger: GCACTGCCCCTCAGGAGCTCAACAACAGCCGGCCGG...CGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | CTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGGGCCTGTCGAACACGTaGATGTGGTACGCTGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQGSRAWLGANVVPTPTRGLSNT*MWYAGG Trigger: ACCACCAGCGTACCACATGCACGTGTTCGACAGGCC...CCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CAA 72 bp | TTCCGAGCCCGGGGAAGCTCGACTGACCCGCAGGAGTaGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRARGSSTDPQE*RRLRSHAHQAP Trigger: GGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTGCGGGTCAGTCGAGCTTCCCCGGGCTCGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGAGTCATCCGGGAGGCTaGCCAGCAGGGGTGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSWRWGAVFLSRVHGPGSSHPGG*PAGVGS Trigger: GGAACCCACCCCTGCTGGGCAGCCTCCCGGATGACT...CGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | GGAGGTTGGCTGTGGATGCAGCAGCCCCCAGCGACTGAAGCTTCGGTAAATGTTCCCCGCCACCGCCGCTaGCGCTGCTGCTCCTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGWLWMQQPPATEASVNVPRHRR*RCCSCE Trigger: TTCGCAGGAGCAGCAGCGGCAGCGGCGGTGGCGGGG...AACATTTACCGAAGCTTCAGTCGCTGGGGGCTGCTGCATCCACAGCCAACCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCGGGGTGACCCTGAATaGTGTCCATCTGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSPGFTGLARSQRGPHPHRGDPE*CPSAGE Trigger: TTCCCCAGCAGATGGACAGCATTCAGGGTCACCCCG...GTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CAA 72 bp | CGGGGAAGCTCGACTGACCCGCAGGAGTTGAGGCGTTaGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSSTDPQELRR*RSHAHQAPIFC Trigger: GCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTGCGGGTCAGTCGAGCTTCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | TGGGCTGTGTGGCTGAAGAAGCCTGAGCCTTGGTGTGCGAGCACCGTCTGTCTGGCTCCTGAGGGGCAGTaGTGCCATCTCCAGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAVWLKKPEPWCASTVCLAPEGQ*CHLQPL Trigger: CAGGGGCTGGAGATGGCAGCACTGCCCCTCAGGAGC...CAGACAGACGGTGCTCGCACACCAAGGCTCAGGCTTCTTCAGCCACACAGCCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | GGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTAAGTCGTCCATGGCCTaGTTGAACTCGAGGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GELSFSPGFTGLARSQRGKSSMA*LNSRRR Trigger: GCGCCGCCTCGAGTTCAACCAGGCCATGGACGACTT...ACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCATCAATCCGGGGAGGTaGGGTCGGAGGAGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCLSLQGSRAWLGANVVPINPGR*GRRSHQ Trigger: CTGATGGCTCCTCCGACCCCACCTCCCCGGATTGAT...GGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGAGCCAACGTGGTCCCCACCCCCACCCGGACTGGCTGCGCACGCTTCCCCCATCTTCTGACACAGTaGGGTTGGTTTCACTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGANVVPTPTRTGCARFPHLLTQ*GWFHWF Trigger: GAACCAGTGAAACCAACCCCACTGTGTCAGAAGATG...GGGGAAGCGTGCGCAGCCAGTCCGGGTGGGGGTGGGGACCACGTTGGCTCCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCCAGCCAGGAGGTTGGCTGTaGATGCAGCAGCCCCCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QELRRLRSHAHQAPIFCQPGGWL*MQQPPA Trigger: CGCTGGGGGCTGCTGCATCCACAGCCAACCTCCTGG...CTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
||
| CDS-3UTR CCA 90 bp | CCCGGGGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGGTTTCACTGGTTCCTaGAAGGAGGAGACACCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGAPGGGELSFSPGFTGLGFTGS*KEETPA Trigger: CGCAGGTGTCTCCTCCTTCCAGGAACCAGTGAAACC...CAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCCAGCCACCGCTCCGCTGTTaGCACGCAGCACGCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QELRRLRSHAHQAPIFCQPPLRC*HAARTQ Trigger: TTGAGTGCGTGCTGCGTGCCAACAGCGGAGCGGTGG...CTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCTGGGATGCTGTCCTCTaGGTCCGAGCTGTCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SCLSLQGSRAWLGANVVPWDAVL*VRAVLI Trigger: TATGAGGACAGCTCGGACTCAGAGGACAGCATCCCA...GGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTCTTCCACCTTAGGCACCTCCTGCCGCCTACCCCGGAAGTCTTCCTCGTGGGATGCTGTCCTCTaGGTCCGAGCTGTCCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RASSTLGTSCRLPRKSSSWDAVL*VRAVLI Trigger: TATGAGGACAGCTCGGACTCAGAGGACAGCATCCCA...CGAGGAAGACTTCCGGGGTAGGCGGCAGGAGGTGCCTAAGGTGGAAGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | AGATCGGACCCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTCCCCGCCACCGCCGCTaGCGCTGCTGCTCCTGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSDPLWQVRRDRKETELSPRHRR*RCCSCE Trigger: TTCGCAGGAGCAGCAGCGGCAGCGGCGGTGGCGGGG...AGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCCAGTCCACCTTAGGCACCTCCTaGCGCCTACCCCGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELRRLRSHAHQAPIFCQSTLGTS*RLPRKS Trigger: AGACTTCCGGGGTAGGCGGCAGGAGGTGCCTAAGGT...GGACTGGCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
||
| CDS-3UTR GCA 90 bp | CTCCGGGGTCACTCTCCCCATCCCGGCTGGGTCAAATGGAGGCTGCTGGAGGTGAAGTCCCGGTTTCGCTaGAGCTCCTTCATGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRGHSPHPGWVKWRLLEVKSRFR*SSFMNS Trigger: GGAATTCATGAAGGAGCTGCAGCGAAACCGGGACTT...CACCTCCAGCAGCCTCCATTTGACCCAGCCGGGATGGGGAGAGTGACCCCGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCAACCGCCGCATTGTTaGATTTGGATTTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: FSPGFTGLARSQRGPHPHQPPHC*IWISGI Trigger: AATCCCAGAAATCCAAATCCAACAATGCGGCGGTTG...GTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTCCACCGCTCCGCTGTTaGCACGCAGCACGCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPPPLRC*HAARTQ Trigger: TTGAGTGCGTGCTGCGTGCCAACAGCGGAGCGGTGG...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CCGAGGCTGGCAACTTCGGCAACTTGCACGTCAGTCTGCACCTTTTCATTTGGGATCAATCCGGGGAGGTaGGGTCGGAGGAGCCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRLATSATCTSVCTFSFGINPGR*GRRSHQ Trigger: CTGATGGCTCCTCCGACCCCACCTCCCCGGATTGAT...CCCAAATGAAAAGGTGCAGACTGACGTGCAAGTTGCCGAAGTTGCCAGCCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATTTTGGTCTTCTCGGAGAAGGCTCGGGCGAGTTCAAACAGCTTCCTGCGTTCCAGCGGCTGTCTTaGTCACAGGCCATGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PHFGLLGEGSGEFKQLPAFQRLS*SQAMGP Trigger: AGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAA...CGCAGGAAGCTGTTTGAACTCGCCCGAGCCTTCTCCGAGAAGACCAAAATGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| 3UTR CAA 72 bp | GCTTGCCGCTCTGCCGAGGCTGGCAACTTCGGCAACTaGCACGTCAGTCTGCACCTTTTCATTTGGGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACRSAEAGNFGN*HVSLHLFIWGH Trigger: GTGACCCCAAATGAAAAGGTGCAGACTGACGTGCAAGTTGCCGAAGTTGCCAGCCTCGGCAGAGCGGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCATTTCTGCTCATCCCCTATAGAGGAGCCAGACTACAAATGGGGTTTGTGCGTCCATGGCCTGGTTaGACTCGAGGCGGCGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PAFLLIPYRGARLQMGFVRPWPG*TRGGAP Trigger: AGGTGCGCCGCCTCGAGTTCAACCAGGCCATGGACG...CACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGATGAGCAGAAATGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR GCA 90 bp | CCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTTCAGGCCCAGGATCTCCGGTGGGATaGTGTCCTCTGAGTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PLWQVRRDRKETELSSGPGSPVG*CPLSPS Trigger: GCTCGGACTCAGAGGACAGCATCCCACCGGAGATCC...TGGGCCTGAAGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTAAGTCGTCCATGGCCTaGTTGAACTCGAGGCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPKSSMA*LNSRRR Trigger: GCGCCGCCTCGAGTTCAACCAGGCCATGGACGACTT...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTTCAGGCCCATTCCAGCGGCTGTCTTaGTCACAGGCCATGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PLWQVRRDRKETELSSGPFQRLS*SQAMGP Trigger: AGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAA...TGGGCCTGAAGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCAACCGCCGCATTGTTaGATTTGGATTTCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: CLSLQGSRAWLGANVVPTQPPHC*IWISGI Trigger: AATCCCAGAAATCCAAATCCAACAATGCGGCGGTTG...GGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| 3UTR CAA 72 bp | TCATCCCCTATAGAGGAGCCAGACTACAAATGGGGTTaGTGGCTGGCTGGCTGCTGTCTCGAAGGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPIEEPDYKWG*WLAGCCLEGSR Trigger: CCTGGAGCCTTCGAGACAGCAGCCAGCCAGCCACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGTGGTACGCTGGTGGTaGGTACACAGGCGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPIISSSESSKSCLWKAAVVRWW*VHRRGL Trigger: GAGCCCCCGCCTGTGTACTCACCACCAGCGTACCAC...TGCCGCTTTCCACAGACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | CCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAAGTCATCCGGGAGGCTaGCCAGCAGGGGTGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPIISSSESSKSCLWKAASHPGG*PAGVGS Trigger: GGAACCCACCCCTGCTGGGCAGCCTCCCGGATGACT...TGCCGCTTTCCACAGACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCAGGCCCCTCCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTGCTGCCCAGCAGGGGTaGGTTCCAGTTTCTGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RLQAPPPIISSSESSKSCAAQQG*VPVSVA Trigger: CGCTACAGAAACTGGAACCCACCCCTGCTGGGCAGC...ACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGGAGGGGCCTGGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCAGGCCCCTCCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCGTCATCCAGGAGGTTaGCTGTGGATGCAGCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLQAPPPIISSSESSKSCRHPGG*LWMQQP Trigger: GGGCTGCTGCATCCACAGCCAACCTCCTGGATGACG...ACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGGAGGGGCCTGGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
||
| CDS-3UTR TCA 90 bp | AACTCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTTGTCAGTTCCTAACGTGGTACGCTGGTGGTaGGTACACAGGCGGGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSLQAQRISTWVILSVPNVVRWW*VHRRGL Trigger: GAGCCCCCGCCTGTGTACTCACCACCAGCGTACCAC...GTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR GCA 90 bp | GAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGTGGCTGGGCTGGGCTGTGTGAAGTCCCGGTTTCGCTaGAGCTCCTTCATGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ESSKSCLWKAAVAGLGCVKSRFR*SSFMNS Trigger: GGAATTCATGAAGGAGCTGCAGCGAAACCGGGACTT...CACACAGCCCAGCCCAGCCACTGCCGCTTTCCACAGACAGGACTTAGAACTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCATTTCTGCTCATCCCCTATAGAGGAGCCAGACTACAAATGGGGTTTGTGCTGTTGTTGAGCTCCTaGGGGGCAGTGCTGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PAFLLIPYRGARLQMGFVLLLSS*GAVLPS Trigger: AGATGGCAGCACTGCCCCTCAGGAGCTCAACAACAG...CACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGATGAGCAGAAATGCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | CCTCATTTTGGTCTTCTCGGAGAAGGCTCGGGCGAGTTCAAACAGCTTCCTGCGGCTGCAGCTCCTTCATaGATTCCTCATTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHFGLLGEGSGEFKQLPAAAAPS*IPHSAG Trigger: TCCTGCAGAATGAGGAATTCATGAAGGAGCTGCAGC...CGCAGGAAGCTGTTTGAACTCGCCCGAGCCTTCTCCGAGAAGACCAAAATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTTCAGGCCCATGGGGTTGGTTTCACTaGTTCCTGGAAGGAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PLWQVRRDRKETELSSGPWGWFH*FLEGGD Trigger: GTCTCCTCCTTCCAGGAACCAGTGAAACCAACCCCA...TGGGCCTGAAGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | CCTCATTTTGGTCTTCTCGGAGAAGGCTCGGGCGAGTTCAAACAGCTTCCTGCGCTGACACAGTGGGGTTaGTTTCACTGGTTCCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PHFGLLGEGSGEFKQLPALTQWG*FHWFLE Trigger: TTCCAGGAACCAGTGAAACCAACCCCACTGTGTCAG...CGCAGGAAGCTGTTTGAACTCGCCCGAGCCTTCTCCGAGAAGACCAAAATGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTGCTGCAGCTCCTTCATaGATTCCTCATTCTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPAAAPS*IPHSAG Trigger: TCCTGCAGAATGAGGAATTCATGAAGGAGCTGCAGC...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTCCAGGCCCCTCCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTTCGAACACGTGCATGTaGTACGCTGGTGGTGAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RLQAPPPIISSSESSKSCSNTCM*YAGGEY Trigger: GTACTCACCACCAGCGTACCACATGCACGTGTTCGA...ACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGGAGGGGCCTGGAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CCA 90 bp | AACTCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTTGTCAGTTCCTAACGCTGCCCAGCAGGGGTaGGTTCCAGTTTCTGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: NSLQAQRISTWVILSVPNAAQQG*VPVSVA Trigger: CGCTACAGAAACTGGAACCCACCCCTGCTGGGCAGC...GTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR TCA 90 bp | CCTCCAATCATAAGCAGCTCTGAAAGTTCTAAGTCCTGTCTGTGGAAAGCGGCAGCAGCCCCCAGCGACTaGAGCTTCGGTAAATGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPIISSSESSKSCLWKAAAAPSD*SFGKCF Trigger: GAAACATTTACCGAAGCTTCAGTCGCTGGGGGCTGC...TGCCGCTTTCCACAGACAGGACTTAGAACTTTCAGAGCTGCTTATGATTGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS-3UTR GCA 90 bp | ATCTCCACATGGGTCATCTTGTCAGTTCCTAACTGGAACCTTGGGATCCTTCTTCGGGGTGACCCTGAATaGTGTCCATCTGCTGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISTWVILSVPNWNLGILLRGDPE*CPSAGE Trigger: TTCCCCAGCAGATGGACAGCATTCAGGGTCACCCCG...AAGAAGGATCCCAAGGTTCCAGTTAGGAACTGACAAGATGACCCATGTGGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR GCA 90 bp | AGCAGGACCGGTCCAGCCCCTGGGGTACTCCACTGTGATGTAAATTTAGAACCTATGAATTCCTCATTCTaGAGGAAGAGGGCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRTGPAPGVLHCDVNLEPMNSSF*RKRAIL Trigger: GAGAATTGCCCTCTTCCTGCAGAATGAGGAATTCAT...AGGTTCTAAATTTACATCACAGTGGAGTACCCCAGGGGCTGGACCGGTCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR GCA 90 bp | GCATTTCTGCTCATCCCCTATAGAGGAGCCAGACTACAAATGGGGTTTGTGGCTATGAATTCCTCATTCTaGAGGAAGAGGGCAATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: AFLLIPYRGARLQMGFVAMNSSF*RKRAIL Trigger: GAGAATTGCCCTCTTCCTGCAGAATGAGGAATTCAT...AGCCACAAACCCCATTTGTAGTCTGGCTCCTCTATAGGGGATGAGCAGAAATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CAA 72 bp | TCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTaGTCAGTTCCTAACTGGAACCTTGGGATCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQAQRISTWVI*SVPNWNLGILL Trigger: AAGAAGGATCCCAAGGTTCCAGTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| 3UTR CAA 72 bp | CCACATGGGTCATCTTGTCAGTTCCTAACTGGAACCTaGGGATCCTTCTTCTTCCTCTCTTTCTTTCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHGSSCQFLTGT*GSFFFLSFFLS Trigger: AGAAAGAAAGAAAGAGAGGAAGAAGAAGGATCCCAAGGTTCCAGTTAGGAACTGACAAGATGACCCATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 90 bp | CCAGCGGCTGTCTTGGTCACAGGCCATGGGCCCTGGCGCCGGAGGTaGGCCTCCCTCTCCACTCATAGGCTTGGAGCCCCCGGGGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: PAAVLVTGHGPWRRR*ASLSTHRLGAPGVT Trigger: GGTCACCCCGGGGGCTCCAAGCCTATGAGTGGAGAGGGAGGCCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | CCCGGGGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGTCCACCGCTCCGCTGTaGGCACGCAGCACGCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGAPGGGELSFSPGFTGLSTAPL*ARSTHS Trigger: TGAGTGCGTGCTGCGTGCCAACAGCGGAGCGGTGGA...CAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 90 bp | CAGGTACTGTTTCCAGCGGCTGTCTTGGTCACAGGCCATGGGCCCTaGCGCCGGAGGTGGGCCTCCCTCTCCACTCATAGGCTTGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QVLFPAAVLVTGHGP*RRRWASLSTHRLGA Trigger: GGCTCCAAGCCTATGAGTGGAGAGGGAGGCCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAACAGTACCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS TCA 90 bp | GGGCTCCAGAGTCCTTTCCAGGATCTCCGGTGGGATGCTGTCCTCTaGGTCCGAGCTGTCCTCATAGGCGCTGCCACCACCCGCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLQSPFQDLRWDAVL*VRAVLIGAATTRLQ Trigger: CTGGAGGCGGGTGGTGGCAGCGCCTATGAGGACAGCTCGGACTCAGAGGACAGCATCCCACCGGAGATCCTGGAAAGGACTCTGGAGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CAA 90 bp | TGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCTTTCCAGCGGCTGTCTaGGTCACAGGCCATGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CLSLQGSRAWLGANVVPTFPAAV*VTGHGP Trigger: GGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAA...GGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAGAGAAAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGGTTCACGGGCCTGGCTCGGAGCCAACGTGGTCCCCACCCCCACCCGGTTAGGAAACATAGTCTaGAAGTCGTCCATGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LQGSRAWLGANVVPTPTRLGNIV*KSSMAW Trigger: CCAGGCCATGGACGACTTCAAGACTATGTTTCCTAA...CCGGGTGGGGGTGGGGACCACGTTGGCTCCGAGCCAGGCCCGTGAACCCTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CAA 90 bp | CCGCAGGAGTTGAGGCGTTTGCGGTCCCATGCCCACCAGGCTCCCATTTTCTGCTTTCCAGCGGCTGTCTaGGTCACAGGCCATGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PQELRRLRSHAHQAPIFCFPAAV*VTGHGP Trigger: GGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAA...GCAGAAAATGGGAGCCTGGTGGGCATGGGACCGCAAACGCCTCAACTCCTGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS CCA 90 bp | AGGGCAATTCTCTCATCTTCCAGGTACTGTTTCCAGCGGCTGTCTTaGTCACAGGCCATGGGCCCTGGCGCCGGAGGTGGGCCTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAILSSSRYCFQRLS*SQAMGPGAGGGPPS Trigger: AGAGGGAGGCCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAACAGTACCTGGAAGATGAGAGAATTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 90 bp | GGGAAGGATTCGGAGGAAGTCATCCGGGAGGCTGCCCAGCAGGGGTaGGTTCCAGTTTCTGTAGCGTCTCTGGCTTGCAGGTTGTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKDSEEVIREAAQQG*VPVSVASLACRLSG Trigger: TCCGGACAACCTGCAAGCCAGAGACGCTACAGAAACTGGAACCCACCCCTGCTGGGCAGCCTCCCGGATGACTTCCTCCGAATCCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS TCA 90 bp | CATCAGGTAAGGCCTGTCGAACACGTGCATGTGGTACGCTGGTGGTaGGTACACAGGCGGGGGCTCTTCCTCAGAGCTATCGGGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HQVRPVEHVHVVRWW*VHRRGLFLRAIGLQ Trigger: CTGGAGCCCGATAGCTCTGAGGAAGAGCCCCCGCCTGTGTACTCACCACCAGCGTACCACATGCACGTGTTCGACAGGCCTTACCTGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS GCA 90 bp | TGTCCATCTGCTGGGGAAGGATTCGGAGGAAGTCATCCGGGAGGCTaGCCAGCAGGGGTGGGTTCCAGTTTCTGTAGCGTCTCTGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CPSAGEGFGGSHPGG*PAGVGSSFCSVSGL Trigger: CAAGCCAGAGACGCTACAGAAACTGGAACCCACCCCTGCTGGGCAGCCTCCCGGATGACTTCCTCCGAATCCTTCCCCAGCAGATGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 90 bp | GTTCCAGTTTCTGTAGCGTCTCTGGCTTGCAGGTTGTCCGGAGCCTaGGACATCAATCCGGGGAGGTGGGGTCGGAGGAGCCATCAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VPVSVASLACRLSGA*DINPGRWGRRSHQV Trigger: TACCTGATGGCTCCTCCGACCCCACCTCCCCGGATTGATGTCCCAGGCTCCGGACAACCTGCAAGCCAGAGACGCTACAGAAACTGGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | CCGAGGCTGGCAACTTCGGCAACTTGCACGTCAGTCTGCACCTTTTCATTTGGGTCGTCCATGGCCTGGTaGAACTCGAGGCGGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PRLATSATCTSVCTFSFGSSMAW*NSRRRT Trigger: GGTGCGCCGCCTCGAGTTCAACCAGGCCATGGACGA...CCCAAATGAAAAGGTGCAGACTGACGTGCAAGTTGCCGAAGTTGCCAGCCTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | GGGGCTCCTGGAGGTGGGGAGCTGTCTTTCTCTCCAGGGTTCACGGGCCTGGCTTTAGGAAACATAGTCTaGAAGTCGTCCATGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAPGGGELSFSPGFTGLALGNIV*KSSMAW Trigger: CCAGGCCATGGACGACTTCAAGACTATGTTTCCTAA...AGCCAGGCCCGTGAACCCTGGAGAGAAAGACAGCTCCCCACCTCCAGGAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS-3UTR CAA 90 bp | AACTCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTTGTCAGTTCCTAACTCGTCCATGGCCTGGTaGAACTCGAGGCGGCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: NSLQAQRISTWVILSVPNSSMAW*NSRRRT Trigger: GGTGCGCCGCCTCGAGTTCAACCAGGCCATGGACGA...GTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | GTGCGGCCTCCGTCCCGTGGCAGTGGTTGGTGCAGGTTCCTTAAATCGCCTCTGGCCGCATTGTTGGATTaGGATTTCTGGGATTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: VRPPSRGSGWCRFLKSPLAALLD*DFWDSY Trigger: ATATGAATCCCAGAAATCCAAATCCAACAATGCGGC...CAGAGGCGATTTAAGGAACCTGCACCAACCACTGCCACGGGACGGAGGCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS TCA 90 bp | TCTCCAGGGCGAGGAGGAAGTCCCGGTTTCGCTGCAGCTCCTTCATaGATTCCTCATTCTGCAGGAAGAGGGCAATTCTCTCATCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPGRGGSPGFAAAPS*IPHSAGRGQFSHLP Trigger: TGGAAGATGAGAGAATTGCCCTCTTCCTGCAGAATGAGGAATTCATGAAGGAGCTGCAGCGAAACCGGGACTTCCTCCTCGCCCTGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | TTGGTCTTCTCGGAGAAGGCTCGGGCGAGTTCAAACAGCTTCCTGCGCGTAGATTTTCCAACCGCCGCATaGTTGGATTTGGATTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVFSEKARASSNSFLRVDFPTAA*LDLDFW Trigger: CCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAA...ATCTACGCGCAGGAAGCTGTTTGAACTCGCCCGAGCCTTCTCCGAGAAGACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | AGATCGGACCCACTGTGGCAGGTCAGGAGAGATAGGAAAGAAACCGAACTCTCTTCTGACACAGTGGGGTaGGTTTCACTGGTTCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RSDPLWQVRRDRKETELSSDTVG*VSLVPG Trigger: TCCAGGAACCAGTGAAACCAACCCCACTGTGTCAGA...AGAGAGTTCGGTTTCTTTCCTATCTCTCCTGACCTGCCACAGTGGGTCCGATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| CDS GCA 90 bp | AGGAAGTCCCGGTTTCGCTGCAGCTCCTTCATGAATTCCTCATTCTaGAGGAAGAGGGCAATTCTCTCATCTTCCAGGTACTGTTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RKSRFRCSSFMNSSF*RKRAILSSSRYCFQ Trigger: CTGGAAACAGTACCTGGAAGATGAGAGAATTGCCCTCTTCCTGCAGAATGAGGAATTCATGAAGGAGCTGCAGCGAAACCGGGACTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 90 bp | AGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATTGTTGGATTTaGATTTCTGGGATTCATATTTCAATCGGTCTCTCTCCAGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RRESHRHFQPPHCWI*ISGIHISIGLSPGR Trigger: TCGCCCTGGAGAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | CCGAGGCTGGCAACTTCGGCAACTTGCACGTCAGTCTGCACCTTTTCATTTGGGGCCGCATTGTTGGATTaGGATTTCTGGGATTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: PRLATSATCTSVCTFSFGAALLD*DFWDSY Trigger: ATATGAATCCCAGAAATCCAAATCCAACAATGCGGC...CCCAAATGAAAAGGTGCAGACTGACGTGCAAGTTGCCGAAGTTGCCAGCCTCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 90 bp | GGACAGAGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATTGTTaGATTTGGATTTCTGGGATTCATATTTCAATCGGTCTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GQRRESHRHFQPPHC*IWISGIHISIGLSP Trigger: TGGAGAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCTCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS-3UTR CAA 90 bp | AACTCTCTTCAGGCCCAAAGAATCTCCACATGGGTCATCTTGTCAGTTCCTAACTTTCCAACCGCCGCATaGTTGGATTTGGATTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSLQAQRISTWVILSVPNFPTAA*LDLDFW Trigger: CCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAA...GTTAGGAACTGACAAGATGACCCATGTGGAGATTCTTTGGGCCTGAAGAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | GGTACTGTTTCCAGCGGCTGTCTTGGTCACAGGCCATaGGCCCTGGCGCCGGAGGTGGGCCTCCCTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: GTVSSGCLGHRP*ALAPEVGLPLH Trigger: GTGGAGAGGGAGGCCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAACAGTACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | TTTCCAGCGGCTGTCTTGGTCACAGGCCATGGGCCCTaGCGCCGGAGGTGGGCCTCCCTCTCCACTCATAGG | + |
|
Preference number: 6 (lower is better) Translates to: FPAAVLVTGHGP*RRRWASLSTHR Trigger: CCTATGAGTGGAGAGGGAGGCCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 90 bp | GGCTGCCCAGCAGGGGTGGGTTCCAGTTTCTGTAGCGTCTCTGGCTaGCAGGTTGTCCGGAGCCTGGGACATCAATCCGGGGAGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GCPAGVGSSFCSVSG*QVVRSLGHQSGEVG Trigger: CCCCACCTCCCCGGATTGATGTCCCAGGCTCCGGACAACCTGCAAGCCAGAGACGCTACAGAAACTGGAACCCACCCCTGCTGGGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | TCTGTAGCGTCTCTGGCTTGCAGGTTGTCCGGAGCCTaGGACATCAATCCGGGGAGGTGGGGTCGGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVASLACRLSGA*DINPGRWGRRS Trigger: GCTCCTCCGACCCCACCTCCCCGGATTGATGTCCCAGGCTCCGGACAACCTGCAAGCCAGAGACGCTACAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | CTCTCATCTTCCAGGTACTGTTTCCAGCGGCTGTCTTaGTCACAGGCCATGGGCCCTGGCGCCGGAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSSRYCFQRLS*SQAMGPGAGGG Trigger: CCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAACAGTACCTGGAAGATGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 90 bp | GAGGGCAATTCTCTCATCTTCCAGGTACTGTTTCCAGCGGCTGTCTaGGTCACAGGCCATGGGCCCTGGCGCCGGAGGTGGGCCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: EGNSLIFQVLFPAAV*VTGHGPWRRRWASL Trigger: GAGGGAGGCCCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAACAGTACCTGGAAGATGAGAGAATTGCCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | AGGTTGTCCGGAGCCTGGGACATCAATCCGGGGAGGTaGGGTCGGAGGAGCCATCAGGTAAGGCCTGTCGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLSGAWDINPGR*GRRSHQVRPVE Trigger: TTCGACAGGCCTTACCTGATGGCTCCTCCGACCCCACCTCCCCGGATTGATGTCCCAGGCTCCGGACAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS CCA 72 bp | TCGGAGGAAGTCATCCGGGAGGCTGCCCAGCAGGGGTaGGTTCCAGTTTCTGTAGCGTCTCTGGCTTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SEEVIREAAQQG*VPVSVASLACR Trigger: CCTGCAAGCCAGAGACGCTACAGAAACTGGAACCCACCCCTGCTGGGCAGCCTCCCGGATGACTTCCTCCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS CAA 72 bp | TTAGGAAACATAGTCTTGAAGTCGTCCATGGCCTGGTaGAACTCGAGGCGGCGCACCTGGCGGGCCGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LGNIVLKSSMAW*NSRRRTWRAGR Trigger: CCGGCCGGCCCGCCAGGTGCGCCGCCTCGAGTTCAACCAGGCCATGGACGACTTCAAGACTATGTTTCCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS CAA 72 bp | TCTCTCATCTTCCAGGTACTGTTTCCAGCGGCTGTCTaGGTCACAGGCCATGGGCCCTGGCGCCGGAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLIFQVLFPAAV*VTGHGPWRRRW Trigger: CCACCTCCGGCGCCAGGGCCCATGGCCTGTGACCAAGACAGCCGCTGGAAACAGTACCTGGAAGATGAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS TCA 72 bp | AGTCCTTTCCAGGATCTCCGGTGGGATGCTGTCCTCTaGGTCCGAGCTGTCCTCATAGGCGCTGCCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: SPFQDLRWDAVL*VRAVLIGAATT Trigger: GGTGGTGGCAGCGCCTATGAGGACAGCTCGGACTCAGAGGACAGCATCCCACCGGAGATCCTGGAAAGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS GCA 72 bp | CAGGGGTGGGTTCCAGTTTCTGTAGCGTCTCTGGCTTaGAGGTTGTCCGGAGCCTGGGACATCAATCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QGWVPVSVASLA*RLSGAWDINPG Trigger: CCCCGGATTGATGTCCCAGGCTCCGGACAACCTGCAAGCCAGAGACGCTACAGAAACTGGAACCCACCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS CCA 72 bp | CTGCCACCACCCGCCTCCAGGTTCATCTGTAACAGCTaGTCTATGGTGGCATCCACCGCTCCGCTGTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LPPPASRFICNS*SMVASTAPLLA Trigger: TGCCAACAGCGGAGCGGTGGATGCCACCATAGACCAGCTGTTACAGATGAACCTGGAGGCGGGTGGTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS CAA 72 bp | GCAGGGGTGGGTTCCAGTTTCTGTAGCGTCTCTGGCTaGCAGGTTGTCCGGAGCCTGGGACATCAATCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGVGSSFCSVSG*QVVRSLGHQSG Trigger: CCCGGATTGATGTCCCAGGCTCCGGACAACCTGCAAGCCAGAGACGCTACAGAAACTGGAACCCACCCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS TCA 72 bp | AGGCCTGTCGAACACGTGCATGTGGTACGCTGGTGGTaGGTACACAGGCGGGGGCTCTTCCTCAGAGCTATC | + |
|
Preference number: 6 (lower is better) Translates to: RPVEHVHVVRWW*VHRRGLFLRAI Trigger: GATAGCTCTGAGGAAGAGCCCCCGCCTGTGTACTCACCACCAGCGTACCACATGCACGTGTTCGACAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
||
| CDS GCA 72 bp | TGCTGTCCTCTGAGTCCGAGCTGTCCTCATAGGCGCTaGCACCACCCGCCTCCAGGTTCATCTGTAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: CCPLSPSCPHRR*HHPPPGSSVTA Trigger: AGCTGTTACAGATGAACCTGGAGGCGGGTGGTGGCAGCGCCTATGAGGACAGCTCGGACTCAGAGGACAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | ATGTTAGGAAACATAGTCTTGAAGTCGTCCATGGCCTaGTTGAACTCGAGGCGGCGCACCTGGCGGGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: MLGNIVLKSSMA*LNSRRRTWRAG Trigger: GCCGGCCCGCCAGGTGCGCCGCCTCGAGTTCAACCAGGCCATGGACGACTTCAAGACTATGTTTCCTAACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 72 bp | TGGGTTCCAGTTTCTGTAGCGTCTCTGGCTTGCAGGTaGTCCGGAGCCTGGGACATCAATCCGGGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: WVPVSVASLACR*SGAWDINPGRW Trigger: CCACCTCCCCGGATTGATGTCCCAGGCTCCGGACAACCTGCAAGCCAGAGACGCTACAGAAACTGGAACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS GCA 72 bp | GGTTGGTTTCACTGGTTCCTGGAAGGAGGAGACACCTaGGGGGACAGAGGAGGGAAAGCCACCGTCATTTCC | + |
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Preference number: 6 (lower is better) Translates to: GWFHWFLEGGDT*GDRGGKATVIS Trigger: GGAAATGACGGTGGCTTTCCCTCCTCTGTCCCCGCAGGTGTCTCCTCCTTCCAGGAACCAGTGAAACCAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| CDS CCA 72 bp | ATAAGGCATCTTCTGACACAGTGGGGTTGGTTTCACTaGTTCCGGGGACAGAGGAGGGAAAGCCACCGTCAT | + |
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Preference number: 6 (lower is better) Translates to: IRHLLTQWGWFH*FRGQRRESHRH Trigger: ATGACGGTGGCTTTCCCTCCTCTGTCCCCGGAACCAGTGAAACCAACCCCACTGTGTCAGAAGATGCCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS CCA 72 bp | ATAAGGCATCTTCTGACACAGTGGGGTTGGTTTCACTaGTTCCTGGAAGGAGGAGACACCTGCGGGGACAGA | + |
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Preference number: 6 (lower is better) Translates to: IRHLLTQWGWFH*FLEGGDTCGDR Trigger: TCTGTCCCCGCAGGTGTCTCCTCCTTCCAGGAACCAGTGAAACCAACCCCACTGTGTCAGAAGATGCCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| CDS CAA 72 bp | TTGTCCCTGAATAAGGCATCTTCTGACACAGTGGGGTaGGTTTCACTGGTTCCGGGGACAGAGGAGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSLNKASSDTVG*VSLVPGTEEGK Trigger: CTTTCCCTCCTCTGTCCCCGGAACCAGTGAAACCAACCCCACTGTGTCAGAAGATGCCTTATTCAGGGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS CAA 90 bp | TGTTTCAACTTGTCCCTGAATAAGGCATCTTCTGACACAGTGGGGTaGGTTTCACTGGTTCCGGGGACAGAGGAGGGAAAGCCACCGTCA | + |
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Preference number: 6 (lower is better) Translates to: CFNLSLNKASSDTVG*VSLVPGTEEGKPPS Trigger: TGACGGTGGCTTTCCCTCCTCTGTCCCCGGAACCAGTGAAACCAACCCCACTGTGTCAGAAGATGCCTTATTCAGGGACAAGTTGAAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS CAA 90 bp | GAGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATTGTTGGATTaGGATTTCTGGGATTCATATTTCAATCGGTCTCTCTCCAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: EEGKPPSFPTAALLD*DFWDSYFNRSLSRA Trigger: CGCCCTGGAGAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 90 bp | CCGGGGACAGAGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATaGTTGGATTTGGATTTCTGGGATTCATATTTCAATCGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PGTEEGKPPSFPTAA*LDLDFWDSYFNRSL Trigger: GAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCTCTGTCCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS CAA 90 bp | GCGGGGACAGAGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATaGTTGGATTTGGATTTCTGGGATTCATATTTCAATCGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AGTEEGKPPSFPTAA*LDLDFWDSYFNRSL Trigger: GAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCTCTGTCCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154812.8 |
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| CDS CAA 90 bp | GGGACAGAGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATTGTaGGATTTGGATTTCTGGGATTCATATTTCAATCGGTCTCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GTEEGKPPSFPTAAL*DLDFWDSYFNRSLS Trigger: GGAGAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCTCTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 72 bp | AGCTTCCTGCGCGTAGATTTTCCCATGTGTTTCAACTaGTCCCTGAATAAGGCATCTTCTGACACAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SFLRVDFPMCFN*SLNKASSDTVG Trigger: CCCCACTGTGTCAGAAGATGCCTTATTCAGGGACAAGTTGAAACACATGGGAAAATCTACGCGCAGGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS CAA 72 bp | GAGGGAAAGCCACCGTCATTTCCAACCGCCGCATTGTaGGATTTGGATTTCTGGGATTCATATTTCAATCGG | + |
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Preference number: 6 (lower is better) Translates to: EGKPPSFPTAAL*DLDFWDSYFNR Trigger: CCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 90 bp | AGTTCAAACAGCTTCCTGCGCGTAGATTTTCCCATGTGTTTCAACTaGTCCCTGAATAAGGCATCTTCTGACACAGTGGGGTTGGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SSNSFLRVDFPMCFN*SLNKASSDTVGLVS Trigger: TGAAACCAACCCCACTGTGTCAGAAGATGCCTTATTCAGGGACAAGTTGAAACACATGGGAAAATCTACGCGCAGGAAGCTGTTTGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018522.13 |
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| CDS CCA 72 bp | AGCCACCGTCATTTCCAACCGCCGCATTGTTGGATTTaGATTTCTGGGATTCATATTTCAATCGGTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SHRHFQPPHCWI*ISGIHISIGLS Trigger: AGAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CCA 72 bp | AGGGAAAGCCACCGTCATTTCCAACCGCCGCATTGTTaGATTTGGATTTCTGGGATTCATATTTCAATCGGT | + |
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Preference number: 6 (lower is better) Translates to: RESHRHFQPPHC*IWISGIHISIG Trigger: ACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 72 bp | AAGCCACCGTCATTTCCAACCGCCGCATTGTTGGATTaGGATTTCTGGGATTCATATTTCAATCGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: KPPSFPTAALLD*DFWDSYFNRSL Trigger: GAGAGACCGATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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| CDS CAA 72 bp | GAGGAGGGAAAGCCACCGTCATTTCCAACCGCCGCATaGTTGGATTTGGATTTCTGGGATTCATATTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: EEGKPPSFPTAA*LDLDFWDSYFN Trigger: ATTGAAATATGAATCCCAGAAATCCAAATCCAACAATGCGGCGGTTGGAAATGACGGTGGCTTTCCCTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018522.13 ENSMUST00000154812.8 |
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