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Pregenerated sensors for CUBN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026726

Ensembl transcript IDs: ENSMUST00000091436.7

Found 484 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 72 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTaGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGG +
Preference number: 3 (lower is better)
Translates to: AWAEMGMRTTEF*AGLRVASDGAG
Trigger: CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
3UTR TCA 72 bp AACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTaGCGGCGCGGGGCAGAGCCAGAGGGGTTACACACA +
Preference number: 3 (lower is better)
Translates to: NHRVLGRVAGCV*RRGAEPEGLHT
Trigger: TGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
3UTR TCA 72 bp CTAAATGGTGCATCCAGTAAGGATGGCATGTACACCTaGGTGGAACACCACCAGGCTCTGCCTTCAGAACAC +
Preference number: 3 (lower is better)
Translates to: LNGASSKDGMYT*VEHHQALPSEH
Trigger: GTGTTCTGAAGGCAGAGCCTGGTGGTGTTCCACTCAGGTGTACATGCCATCCTTACTGGATGCACCATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
3UTR CCA 72 bp ATGGTGCATCCAGTAAGGATGGCATGTACACCTGAGTaGAACACCACCAGGCTCTGCCTTCAGAACACCAAA +
Preference number: 3 (lower is better)
Translates to: MVHPVRMACTPE*NTTRLCLQNTK
Trigger: TTTGGTGTTCTGAAGGCAGAGCCTGGTGGTGTTCCACTCAGGTGTACATGCCATCCTTACTGGATGCACCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
3UTR CAA 72 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTaGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAG*RVASDGAGQSQ
Trigger: CTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACTCCGCACTCTTGCCTaGATTGAGCTCGGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRLRTLA*IELGSP
Trigger: GGGGCTTCCGAGCTCAATTCAGGCAAGAGTGCGGAG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAAGCAGGAAAGGGCTaGCACGGCTGGCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGQAGKG*HGWLPA
Trigger: GGCTGGAAGCCAGCCGTGGCAGCCCTTTCCTGCTTG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACGGTCCAAAGGGTGGTaGGTTGGCATCTGGACCATT +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTRSKGW*VGIWTI
Trigger: AATGGTCCAGATGCCAACTCACCACCCTTTGGACCG...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCCCTCCACAAGCTCCTaGAGCAATGGTGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGPSTSS*SNGGQG
Trigger: ACCCTGCCCACCATTGCTCCAGGAGCTTGTGGAGGG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATCAAGGAGCCAGGACTaGCTAGAAGGTTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTSRSQD*LEGSRH
Trigger: GTGTCTGGAACCTTCTAGTCAGTCCTGGCTCCTTGA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCACTCTTGCCTGAATTaGGCTCGGAAGCCCCTGCTC +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGHSCLN*ARKPLL
Trigger: GAGCAGGGGCTTCCGAGCTCAATTCAGGCAAGAGTG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGACCCCACTGTCCCCTaGGACAGTTCCTCCGCACGA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGDPTVP*DSSSAR
Trigger: TCGTGCGGAGGAACTGTCTCAGGGGACAGTGGGGTC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAAATCCAGAGAGCAGTTaGGGTGGTGTTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTNPESS*GGVPGG
Trigger: TCCACCTGGAACACCACCCCAACTGCTCTCTGGATT...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTCGGAAGCCCCTGCTCTaGCTGGAAGATCCAGACTGG +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGRKPLL*LEDPDW
Trigger: CCAGTCTGGATCTTCCAGCCAGAGCAGGGGCTTCCG...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCTGGACCTGCTGGTGTaGGGGAGCTTCAATGACCCA +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGLDLLV*GSFNDP
Trigger: TGGGTCATTGAAGCTCCCCCACACCAGCAGGTCCAG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACCAAGAATGGGGTCATaGTGGAAAGGACCATCTCGA +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTPRMGS*WKGPSR
Trigger: TCGAGATGGTCCTTTCCATCATGACCCCATTCTTGG...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACCACCACAGCTCTTTTaGAAGGAGGCGTTGAAGCCT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRPPQLF*KEALKP
Trigger: AGGCTTCAACGCCTCCTTTCAAAAGAGCTGTGGTGG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCCCTGAGGGTAGGGGATaGCCAAGGGCACTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGPEGRG*PRALLV
Trigger: CACCAAGAGTGCCCTTGGTCATCCCCTACCCTCAGG...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGAGCTCGGAAGCCCCTaGTCTGGCTGGAAGATCCAG +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCELGSP*SGWKIQ
Trigger: CTGGATCTTCCAGCCAGAGCAGGGGCTTCCGAGCTC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAGAGAGCAGTTGGGGTaGTGTTCCAGGTGGAAGTCT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRREQLG*CSRWKS
Trigger: AGACTTCCACCTGGAACACCACCCCAACTGCTCTCT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAGTGAAGCCTCCATATaGCCGGGAGCCATCAGTGAA +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRSEASI*PGAISE
Trigger: TTCACTGATGGCTCCCGGCCATATGGAGGCTTCACT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAAGCTGTTCCGACACTaGCTGTCACTGCTGGGGATT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRKLFRH*LSLLGI
Trigger: AATCCCCAGCAGTGACAGCCAGTGTCGGAACAGCTT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATGTGACAATGGGACTTaGAGCCACATTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTCDNGT*SHIPTA
Trigger: AGCTGTGGGAATGTGGCTCCAAGTCCCATTGTCACA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACTCTCCTTGGGGTTGTaGGATGAGATAGACACACTG +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRLSLGL*DEIDTL
Trigger: CAGTGTGTCTATCTCATCTCACAACCCCAAGGAGAG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACTCCAGGTAATCATGTaGGCAAAGGTTGGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRLQVIM*AKVGGN
Trigger: GTTCCCTCCAACCTTTGCTCACATGATTACCTGGAG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTAGATGTCCAAGGGGGTaGACACTCTCCCATCACCAC +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGRCPRG*TLSHHH
Trigger: GTGGTGATGGGAGAGTGTGCACCCCCTTGGACATCT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCATCCCGGAGGACAGGTaGAGACAGGCAACAAGGACC +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCIPEDR*RQATRT
Trigger: GGTCCTTGTTGCCTGTCTGCACCTGTCCTCCGGGAT...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGAGACACAAAGCTCTTaGTGTCCTCAGTCAGGTACC +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRETQSS*CPQSGT
Trigger: GGTACCTGACTGAGGACAGCAAGAGCTTTGTGTCTC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGCAGTGGTGAACTGCTaGTGCTGCCATTTCTTACCT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRAVVNC*CCHFLP
Trigger: AGGTAAGAAATGGCAGCAGCAGCAGTTCACCACTGC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACTTTACTGGAACGAATaGGAGCAGGTGGTGTATCCC +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRLYWNE*EQVVYP
Trigger: GGGATACACCACCTGCTCCCATTCGTTCCAGTAAAG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCTCTCCCATCACCACTaGAACCTGCTGGACAGTTCC +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVLSHHH*NLLDSS
Trigger: GGAACTGTCCAGCAGGTTTCAGTGGTGATGGGAGAG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCAAGCCACGTCCTTGTTaGCCTGCATCAGTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCKPRPC*PASVLS
Trigger: GCTGAGGACTGATGCAGGTCAACAAGGACGTGGCTT...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTCATGGATGGTGAGCTaGATGCTATTCCCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGSWMVS*MLFPGA
Trigger: GGCCCCAGGGAATAGCATTCAGCTCACCATCCATGA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACAAAGTCATGGATGGTaGGCTGAATGCTATTCCCTG +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRQSHGW*AECYSL
Trigger: CAGGGAATAGCATTCAGCTCACCATCCATGACTTTG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACATCAGAGACAAATCTaGCCCACAGATTATGTCCCT +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTHQRQI*PTDYVP
Trigger: AGGGACATAATCTGTGGGTCAGATTTGTCTCTGATG...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAACCAACGCTCTCGATaGCCCCACTGTCCCCTGAGA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDNQRSR*PHCPLR
Trigger: TCTCAGGGGACAGTGGGGTCATCGAGAGCGTTGGTT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGGGCACTCTTGGTGCTaGCAGGCTGCAAAACTTCTC +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGGHSWC*QAAKLL
Trigger: GAGAAGTTTTGCAGCCTGTCAGCACCAAGAGTGCCC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCGTCCTATGATGGGTaGTCCAGGGGAGTCACCATT +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGSSYDG*SRGVTI
Trigger: AATGGTGACTCCCCTGGATCACCCATCATAGGACGA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTCACAGTATCGTCCTATaGTGGGTGATCCAGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGHSIVL*WVIQGS
Trigger: ACTCCCCTGGATCACCCATCATAGGACGATACTGTG...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGAAATGAATTCTTGCTaGGGGACCTGTAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSREMNSC*GTCSLE
Trigger: CTCCAGACTACAGGTCCCGCAGCAAGAATTCATTTC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCACGGCTAATGAAGGATaGAGAGAAGCCCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGTANEG*REALGW
Trigger: CCAGCCCAGGGCTTCTCTGCATCCTTCATTAGCCGT...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTGGGCAGCAGGTTGCTaGAGTACTTGCCAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVWAAGC*STCQAV
Trigger: CACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCCAGGTGGATCCACTCTaGCAGCCAAAGGGTGTTCCA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGQVDPL*QPKGVP
Trigger: TGGAACACCCTTTGGCTGCCAGAGTGGATCCACCTG...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGGTTGCATCTGGATaGCAGCCTCCATTATGGATC +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGQVASG*QPPLWI
Trigger: GATCCATAATGGAGGCTGCCATCCAGATGCAACCTG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGCGGGACCTGTAGTCTaGAGTGGTGGGGTAGACAGA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDAGPVV*SGGVDR
Trigger: TCTGTCTACCCCACCACTCCAGACTACAGGTCCCGC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTACTTCTCTTGGGGGTTaGGAGATGGTCCACCTACAG +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGTSLGG*EMVHLQ
Trigger: CTGTAGGTGGACCATCTCCCAACCCCCAAGAGAAGT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTAGCCCCTGCTCTGGCTaGAAGATCCAGACTGGAATC +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVSPCSG*KIQTGI
Trigger: GATTCCAGTCTGGATCTTCCAGCCAGAGCAGGGGCT...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGTTTGGATAGTTGGCTaGGTACAGTGGAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRVWIVG*VQWRGD
Trigger: ATCTCCTCTCCACTGTACCCAGCCAACTATCCAAAC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGATTTCCAGGGGAGCTaGCAATGTTCCAGACACATT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRDFQGS*QCSRHI
Trigger: AATGTGTCTGGAACATTGCCAGCTCCCCTGGAAATC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGACTGGCTGTCACTGCTaGGGATTCGGAAATTGCTGT +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGTGCHC*GFGNCC
Trigger: ACAGCAATTTCCGAATCCCCAGCAGTGACAGCCAGT...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTAGAGAAGCCCTGGGCTaGCATCTCCTCAGATTGGAA +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGREALG*HLLRLE
Trigger: TTCCAATCTGAGGAGATGCCAGCCCAGGGCTTCTCT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGATGCAGAGAAGCCCTaGGCTGGCATCTCCTCAGAT +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGDAEKP*AGISSD
Trigger: ATCTGAGGAGATGCCAGCCCAGGGCTTCTCTGCATC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATTTCAGAACCACATATaGTCACGAGAGGAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTFQNHI*SREEWK
Trigger: CTTCCACTCCTCTCGTGACCATATGTGGTTCTGAAA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTGCTTACAGAGCTGCTaGGAGCCCTGTTCACAGTCA +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCCLQSC*EPCSQS
Trigger: TGACTGTGAACAGGGCTCTCAGCAGCTCTGTAAGCA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGTCTCCAACCTCGATaGAAGTGTGAGAACAGCCCC +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDGLQPR*KCENSP
Trigger: GGGGCTGTTCTCACACTTTCATCGAGGTTGGAGACC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCCGCATCCCAGTAAGCTaGAAAACCCCTTGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGRIPVS*KTPCCE
Trigger: CTCACAGCAAGGGGTTTTTCAGCTTACTGGGATGCG...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAAAGACAGCTGCAGGTaGTTTCCAGGGGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDKDSCR*FPGELA
Trigger: TGCCAGCTCCCCTGGAAATCACCTGCAGCTGTCTTT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCGTGCCAGGAGCAGTTaGGATTGGGAAGGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCRARSS*DWEGSC
Trigger: ACAACTACCTTCCCAATCTCAACTGCTCCTGGCACG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGTACCATTATCTGAGTaGAGTGTTCCACCACAACCT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRVPLSE*SVPPQP
Trigger: AGGTTGTGGTGGAACACTTCACTCAGATAATGGTAC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGTCATAAAGTCCATCTaGGTCATGATCAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRVIKSI*VMIRRH
Trigger: GTGTCTCCTGATCATGACTCAGATGGACTTTATGAC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGTGGGGGAGCTTCAATaGCCCAAGTACAGGTGGAAA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGVGELQ*PKYRWK
Trigger: TTTCCACCTGTACTTGGGTCATTGAAGCTCCCCCAC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTCCATGGTGGGTGTCTaGGTCATCGCTGTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDSMVGV*VIAVEV
Trigger: CACTTCCACAGCGATGACTCAGACACCCACCATGGA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATTGAGGCATCGAAGTTaGATTATATGTTCCCCCACA +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTLRHRS*IICSPT
Trigger: TGTGGGGGAACATATAATGCAACTTCGATGCCTCAA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTACAGTTATCTGGACCTaGTGGTGTGGGGGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVTVIWT*WCGGAS
Trigger: TGAAGCTCCCCCACACCAGCAGGTCCAGATAACTGT...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGTCTTGTGAGGGCAGCTaGAGTTTCCACACAGTTATC +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGSCEGS*SFHTVI
Trigger: GATAACTGTGTGGAAACTGCAGCTGCCCTCACAAGA...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGTGGTGAACTGCTGCTaGTGCCATTTCTTACCTCCA +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGVVNCC*CHFLPP
Trigger: TGGAGGTAAGAAATGGCAGCAGCAGCAGTTCACCAC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGATCATCGCTGTGGAAGTaGAGATACAGTTCATTGCTC +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRSSLWK*RYSSLL
Trigger: GAGCAATGAACTGTATCTGCACTTCCACAGCGATGA...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCAGGAGATACCATTTaGCAGTGTTGTCCACCCAGC +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGAGDTI*QCCPPS
Trigger: GCTGGGTGGACAACACTGCCAAATGGTATCTCCTGC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACTCTCCAGCTCCACGTaGGTGAAGTTGATAACTATT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRLSSST*VKLITI
Trigger: AATAGTTATCAACTTCACCCACGTGGAGCTGGAGAG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTTGGGGGTTGGGAGATaGTCCACCTACAGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVLGVGR*STYRFF
Trigger: GAAGAACCTGTAGGTGGACCATCTCCCAACCCCCAA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGTGTTGTAGCTCCTGGTaGGGGGATATTTTCTCCACA +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGCCSSW*GDIFST
Trigger: TGTGGAGAAAATATCCCCCCACCAGGAGCTACAACA...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGCTGAATGCTATTCCCTaGGGCCACGCGAATGTTCCA +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVALNAIP*GHANVP
Trigger: TGGAACATTCGCGTGGCCCCAGGGAATAGCATTCAG...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCTCCTCTGGAAACCTaGAAAATCCCACCGCAACCT +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGSPLET*KIPPQP
Trigger: AGGTTGCGGTGGGATTTTCCAGGTTTCCAGAGGAGA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGGTTGTTTGGATAGTTaGCTGGGTACAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGGCLDS*LGTVER
Trigger: CCTCTCCACTGTACCCAGCCAACTATCCAAACAACC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGAATGATATGATGGGATaGGGCAGAGAGGTACCACAG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGNDMMG*GREVPQ
Trigger: CTGTGGTACCTCTCTGCCCCATCCCATCATATCATT...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATTGATGCAGAGTAGATaGCATGGAAACCGTCAAAAC +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTLMQSR*HGNRQN
Trigger: GTTTTGACGGTTTCCATGCCATCTACTCTGCATCAA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAGAATGGTAGTCTTCTaGGTAGCCAGGGCTATTGAA +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRRMVVF*VARAIE
Trigger: TTCAATAGCCCTGGCTACCCAGAAGACTACCATTCT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAAGAGAGTTCTCCAACTaGAAGGATAGAAAAGACAGC +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTREFSN*KDRKDS
Trigger: GCTGTCTTTTCTATCCTTCCAGTTGGAGAACTCTCT...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAGTAGTTGGAGTTAAGTaGGTAATTTCCAGGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTVVGVK*VISRPE
Trigger: TTCTGGCCTGGAAATTACCCACTTAACTCCAACTAC...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAACATCTGCTGTTTTCTaGGAATGTCTGAGGCCAATG +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRTSAVF*ECLRPM
Trigger: CATTGGCCTCAGACATTCCCAGAAAACAGCAGATGT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAGTTGTCATAGTGCTTTaGGAAGTTTGGAGAGACGAT +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTVVIVL*EVWRDD
Trigger: ATCGTCTCTCCAAACTTCCCAAAGCACTATGACAAC...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAGATTCCACCACAGTTaGCGACTCTGTAGGAAATCT +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRRFHHS*RLCRKS
Trigger: AGATTTCCTACAGAGTCGCCAACTGTGGTGGAATCT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTAAGAGGGAAATTCTGTaGTTCTGCGGGGCTCTGAGA +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGKREIL*FCGALR
Trigger: TCTCAGAGCCCCGCAGAACCACAGAATTTCCCTCTT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTCTGGTCACAGCCACCTaGAGAGTCGATACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGLVTAT*RVDTEK
Trigger: TTTCTCAGTATCGACTCTCCAGGTGGCTGTGACCAG...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGCTCGTTAACATCCTCTaGGCAGAAGAGACCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVALVNIL*AEETLP
Trigger: TGGAAGGGTCTCTTCTGCTCAGAGGATGTTAACGAG...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGACAGTTCCCACAGGTaGATGATCCTGGAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVDSSHR*MILECS
Trigger: TGAACACTCCAGGATCATTCACCTGTGGGAACTGTC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTACACACGGGTGTCTTaGGCACATATTACTGAGGCG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVYTRVS*AHITEA
Trigger: CGCCTCAGTAATATGTGCTCAAGACACCCGTGTGTA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCTCGCCATGAGGCATTaGAACCTCTTCCATTTAAAG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGLAMRH*NLFHLK
Trigger: CTTTAAATGGAAGAGGTTTCAATGCCTCATGGCGAG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCATTGCCAAATGATATaGTGGGATGGGGCAGAGAGG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVHCQMI*WDGAER
Trigger: CCTCTCTGCCCCATCCCATCATATCATTTGGCAATG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAGTTGCGATTTTCCCATaGGTTCCCACAATATTATCA +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTVAIFP*VPTILS
Trigger: TGATAATATTGTGGGAACTCATGGGAAAATCGCAAC...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGGTGACACTGCCATCTaGTGTGAAGCGGATGTACAT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVGDTAI*CEADVH
Trigger: ATGTACATCCGCTTCACATCAGATGGCAGTGTCACC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTTGCAGCCTAAATCCTaGGTCAGTGACAGAGCCATC +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCLQPKS*VSDRAI
Trigger: GATGGCTCTGTCACTGACTCAGGATTTAGGCTGCAA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGGGGTAGTTGGTGTATaGGAAGGAAGGACTGTTAAG +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGGVVGV*EGRTVK
Trigger: CTTAACAGTCCTTCCTTCTCATACACCAACTACCCC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGAACTGCGGTACTTCCTaGGGAATAGAACACGGGCAA +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVANCGTS*GIEHGQ
Trigger: TTGCCCGTGTTCTATTCCTCAGGAAGTACCGCAGTT...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCTGGAGAGTCGATACTaGGAAAGGGAAACCCAACAG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVLESRY*ERETQQ
Trigger: CTGTTGGGTTTCCCTTTCTCAGTATCGACTCTCCAG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGGAACAAGGTTTCATTaGCACAGATCTTTCGAAGCA +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRGTRFH*HRSFEA
Trigger: TGCTTCGAAAGATCTGTGGCAATGAAACCTTGTTCC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACCATGGATGAACCAGTaGATCTTAAATCCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTPWMNQ*ILNPFS
Trigger: AGAGAAAGGATTTAAGATGCACTGGTTCATCCATGG...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCAGTGCTGGAAATCTaGATGGGATTCGCCGATGGT +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVASVLEI*MGFADG
Trigger: ACCATCGGCGAATCCCATGCAGATTTCCAGCACTGA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATTCTCTGTTGCAGTCTaGAATCTCATAGGTGAAATG +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTFSVAV*NLIGEM
Trigger: CATTTCACCTATGAGATTGCAGACTGCAACAGAGAA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGGTTGTATTCTCTGTTaGAGTCTGCAATCTCATAGG +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRGCILC*SLQSHR
Trigger: CCTATGAGATTGCAGACTGCAACAGAGAATACAACC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTCCTTGCCAACCTTTTaGGCAGGCGCCACAGTAGAA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDSLPTF*AGATVE
Trigger: TTCTACTGTGGCGCCTGCCCAAAAGGTTGGCAAGGA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTGGCAGCCTCCATTATaGATCGAGCAGATGTCCAAG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVWQPPL*IEQMSK
Trigger: CTTGGACATCTGCTCGATCCATAATGGAGGCTGCCA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGGAACAGGTTGCATCTaGATGGCAGCCTCCATTATG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVGTGCI*MAASIM
Trigger: CATAATGGAGGCTGCCATCCAGATGCAACCTGTTCC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGACACAATCTCTTCCTaGGGGGTAGTTTCCAGGGTA +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCDTISS*GVVSRV
Trigger: TACCCTGGAAACTACCCCCCAGGAAGAGATTGTGTC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGTAGTCTGGAGTGGTaGGGTAGACAGAGAAGTACA +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGCSLEW*GRQRST
Trigger: TGTACTTCTCTGTCTACCCCACCACTCCAGACTACA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCACCTGTAGTCTGGAGTaGTGGGGTAGACAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCTCSLE*WGRQRS
Trigger: ACTTCTCTGTCTACCCCACCACTCCAGACTACAGGT...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGATGGAAAAGCCTTCGTaGGCAAGAGCAGAGTCAGAC +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAMEKPS*ARAESD
Trigger: GTCTGACTCTGCTCTTGCCCACGAAGGCTTTTCCAT...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTATGGGGGTAATTGTTaGGGAAGTTCGGGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGYGGNC*GSSGRR
Trigger: TCTCCTCCCCGAACTTCCCCAACAATTACCCCCATA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGGGGTGGTGTTCCAGGTaGAAGTCTTGGAATTCAAGC +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAGWCSR*KSWNSS
Trigger: GCTTGAATTCCAAGACTTCCACCTGGAACACCACCC...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCCCATCAAGTGGCCCGTaGCATTTCCTTCTCGGATTT +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGPSSGP*HFLLGF
Trigger: AAATCCGAGAAGGAAATGCCACGGGCCACTTGATGG...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTATCGTCCCATCAAGTaGCCCGTGGCATTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGYRPIK*PVAFPS
Trigger: AGAAGGAAATGCCACGGGCCACTTGATGGGACGATA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGGGAAGGTAGTTGTCTaGGTACTTGGGGGATGTAAT +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGGKVVV*VLGGCN
Trigger: ATTACATCCCCCAAGTACCCAGACAACTACCTTCCC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCAGTGAGATAGTGTCCTaGGAGGCCTTGGATATGCCA +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCSEIVS*EALDMP
Trigger: TGGCATATCCAAGGCCTCCCAGGACACTATCTCACT...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTGGTCACGAGAGGAGTaGAAGAGAGGTTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVWSREE*KRGCDL
Trigger: AAGGTCACAACCTCTCTTCCACTCCTCTCGTGACCA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGTTATCTGGACCTGCTaGTGTGGGGGAGCTTCAATG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDVIWTC*CGGASM
Trigger: CATTGAAGCTCCCCCACACCAGCAGGTCCAGATAAC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGATTTCATATCCATGGTaGGTGTCTGAGTCATCGCTG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGISYPW*VSESSL
Trigger: CAGCGATGACTCAGACACCCACCATGGATATGAAAT...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGACAATGAGTGTTGTTTaGGTAGCTGTCAGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGTMSVV*VAVRKA
Trigger: GGCTTTCCTGACAGCTACCCAAACAACACTCATTGT...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGAGTCAGAATGGAAATaGATTCTTGCTGCGGGACCT +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGESEWK*ILAAGP
Trigger: AGGTCCCGCAGCAAGAATTCATTTCCATTCTGACTC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGAAAATACCAGAGGTATaGTTCTCCCAGATCTCCACA +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGKIPEV*FSQIST
Trigger: TGTGGAGATCTGGGAGAATCATACCTCTGGTATTTT...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCCGGGAGCCATCAGTaGAAAATATCACTTTCATCG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGAGSHQ*KISLSS
Trigger: CGATGAAAGTGATATTTTTCACTGATGGCTCCCGGC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGAGCGATCTTCCAAATaGAAGGACACAAACGTCAGG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGERSSK*KDTNVR
Trigger: CCTGACGTTTGTGTCCTTTCATTTGGAAGATCGCTC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGTTCCCGAGACAGCTaGGCGATCTTCCAAATGAAA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDGSRDS*AIFQMK
Trigger: TTTCATTTGGAAGATCGCTCAGCTGTCTCGGGAACC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCGTCAGAATAGAAGTTaGGCATCACTGGGCCATCTA +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVRQNRS*ASLGHL
Trigger: TAGATGGCCCAGTGATGCTCAACTTCTATTCTGACG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTAGTCCATCTGAGTCATaGTCAGGAGACACAAAGCTC +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVSPSES*SGDTKL
Trigger: GAGCTTTGTGTCTCCTGATCATGACTCAGATGGACT...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAAGTTGATAACTATTTaGTCTCCTTGGGGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRKLITI*SPWGCE
Trigger: CTCACAACCCCAAGGAGAGCAAATAGTTATCAACTT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGGATTTGGGTAATTTATaGTCTCCAAGATGCCAGAGG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGDLGNL*SPRCQR
Trigger: CCTCTGGCATCTTGGAGAGCATAAATTACCCAAATC...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCCCGTGTGCAATCTGTaGTGCTTTGCAGATGAAAGT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVPVCNL*CFADES
Trigger: ACTTTCATCTGCAAAGCAGCACAGATTGCACACGGG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCTACAAAGTCCCGTGTaGAATCTGTGCTGCTTTGCA +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVLQSPV*NLCCFA
Trigger: TGCAAAGCAGCACAGATTGCACACGGGACTTTGTAG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAATTAGAAACATCTACTaGAAACCACTCCAGAAGGAA +
Preference number: 4 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTIRNIY*KPLQKE
Trigger: TTCCTTCTGGAGTGGTTTGCAGTAGATGTTTCTAAT...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCAAATTGGAGCTGTATaGTTCTCCCTGAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVQIGAV*FSLKVP
Trigger: AGGCACCTTCAGGGAGAAGCATACAGCTCCAATTTG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGGTCATCCGAGGCTGGTaGAGATCAGCAATTCTTTTC +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAVIRGW*RSAILF
Trigger: GAAAAGAATTGCTGATCTCCACCAGCCTCGGATGAC...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTTACTGCAGTCATTGTaGCTCTCCAGGCTCAAGGTG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLLQSL*LSRLKV
Trigger: CACCTTGAGCCTGGAGAGCCACAATGACTGCAGTAA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTCCACCACAGCCATaGATGAACCAGTGCATCTTA +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVASPPQP*MNQCIL
Trigger: TAAGATGCACTGGTTCATCCATGGCTGTGGTGGAGA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGGTTCATTATCAGTGCTaGAAATCTGCATGGGATTCG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGVHYQC*KSAWDS
Trigger: CGAATCCCATGCAGATTTCCAGCACTGATAATGAAC...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGTGATGGAATTAGGTaGCTGCTGTCTTCCACACAC +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDGDGIR*LLSSTH
Trigger: GTGTGTGGAAGACAGCAGCCACCTAATTCCATCACC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCTGGAAGATCCAGACTaGAATCTCACAAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCLEDPD*NLTKRL
Trigger: CAGCCTCTTTGTGAGATTCCAGTCTGGATCTTCCAG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTTTTTGAATCTGGCCTaGAAGCCCATTCCAGTGCCT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCFLNLA*KPIPVP
Trigger: AGGCACTGGAATGGGCTTCCAGGCCAGATTCAAAAA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAATTGGCAGGGTAGTTaGGGGAGGTCACGTATCCAT +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDNWQGS*GRSRIH
Trigger: ATGGATACGTGACCTCCCCCAACTACCCTGCCAATT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTCCACTCACAGATCCTaGGATGAGGATTTGGGTTTG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGSTHRS*DEDLGL
Trigger: CAAACCCAAATCCTCATCCCAGGATCTGTGAGTGGA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTATTTGGATGCACACTaGGGTCCATACGTATCAGGC +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDYLDAH*GPYVSG
Trigger: GCCTGATACGTATGGACCTCAGTGTGCATCCAAATA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTTTCCTCATCGGTTCTaGCAACCCAGAAACAGTTCA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGFPHRF*QPRNSS
Trigger: TGAACTGTTTCTGGGTTGTCAGAACCGATGAGGAAA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGAAAGAGGCTGTTTCCTaGAGAGGTGATGGAATTAGG +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAKEAVS*RGDGIR
Trigger: CCTAATTCCATCACCTCTTCAGGAAACAGCCTCTTT...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGAAGAGTCTCTGTTTTaGATCTGGAAAGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCEESLF*IWKGCS
Trigger: TGAGCAGCCTTTCCAGATTCAAAACAGAGACTCTTC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCCAGTGTTTACTTTCATaGGTGACAGCTGTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGQCLLS*VTAVQE
Trigger: TTCCTGGACAGCTGTCACTCATGAAAGTAAACACTG...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGTGGAAGAGAGGTTGTaGCCTTTGATGATATGCAAG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVVEERL*PLMICK
Trigger: CTTGCATATCATCAAAGGTCACAACCTCTCTTCCAC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGTTCTGAATCCTaGAGTTCTAAGGAGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCVCSES*SSKELL
Trigger: AAGGAGCTCCTTAGAACTTCAGGATTCAGAACAGAC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGGTCCGTGAAATGCAATaGAATCTGTTGGTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAVREMQ*NLLVES
Trigger: GGACTCAACCAACAGATTGCATTGCATTTCACGGAC...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAGGCCAGAATGGAGTTaGGATTTTCCCATGAGTTCC +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDRPEWS*DFPMSS
Trigger: GGAACTCATGGGAAAATCGCAACTCCATTCTGGCCT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTCAACTCAAGATAGCTTaGAGAACAGTTGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGQLKIA*RTVGCF
Trigger: GAAACACCCAACTGTTCTGCAAGCTATCTTGAGTTG...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTTTCGAGGCAAAGTGTaGCCACACAATTTGGAAAGC +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCFRGKV*PHNLES
Trigger: GCTTTCCAAATTGTGTGGGCACACTTTGCCTCGAAA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTTGGTGCTGACAGGCTaGAAAACTTCTCTATTAGGG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVLVLTG*KTSLLG
Trigger: CCCTAATAGAGAAGTTTTGCAGCCTGTCAGCACCAA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGTTCCTCCAGAGTAAATaGATTGAAGGTGAGCTTAAC +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGFLQSK*IEGELN
Trigger: GTTAAGCTCACCTTCAATGCATTTACTCTGGAGGAA...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCATAGCTTGTTACTGTaGGAGATGATTCTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDHSLLL*EMILGG
Trigger: CCCTCCCAGAATCATCTCCCACAGTAACAAGCTATG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGCTGTTGTTGCTTGGATaGTCCAGTTACAACGTTGGT +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVALLLLG*SSYNVG
Trigger: ACCAACGTTGTAACTGGACCATCCAAGCAACAACAG...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTGTGCCCACACAATTTaGAAAGCACAGGTGCATTTG +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVACAHTI*KAQVHL
Trigger: CAAATGCACCTGTGCTTTCCAAATTGTGTGGGCACA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCAGTAGCCATGAACATTaGGTCCATCTGCTGTACAAG +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCSSHEH*VHLLYK
Trigger: CTTGTACAGCAGATGGACCCAATGTTCATGGCTACT...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGAGACCCTTCCACTGTaGAGGGCAGATACAAATAAA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDETLPL*RADTNK
Trigger: TTTATTTGTATCTGCCCTTCACAGTGGAAGGGTCTC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCTTACAGAAGTAACTTaGTACTGTTTCAATGCACTG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGLTEVT*YCFNAL
Trigger: CAGTGCATTGAAACAGTATCAAGTTACTTCTGTAAG...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGGTGTTTGCAGAACTTaGGCCATCATATGTCATAAG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGGVCRT*AIICHK
Trigger: CTTATGACATATGATGGCTCAAGTTCTGCAAACACC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGTTTCATCGTGTTTCCTaGAGATTTGAACTCATTGGT +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGFHRVS*RFELIG
Trigger: ACCAATGAGTTCAAATCTTCAGGAAACACGATGAAA...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCTTTTCTGTAGCTTCTaGTCTGGTGTTCCAGTTTCA +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCLFCSF*SGVPVS
Trigger: TGAAACTGGAACACCAGAGCAGAAGCTACAGAAAAG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGTGTGCAATCTGTGCTaGTTTGCAGATGAAAGTGAG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDVCNLC*FADESE
Trigger: CTCACTTTCATCTGCAAAGCAGCACAGATTGCACAC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGGTTTGTGTTCCATGTTaGATAAAATCCACGACTTTG +
Preference number: 4 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGVCVPC*IKSTTL
Trigger: CAAAGTCGTGGATTTTATGCAACATGGAACACAAAC...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCTGTCCAGGAACATCTaGTGTTTTCTGGGAATGTCT +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLSRNI*CFLGMS
Trigger: AGACATTCCCAGAAAACAGCAGATGTTCCTGGACAG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGCAGATACAGTTCATTaGTCTGAGAGAAGATGGGGT +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDADTVH*SERRWG
Trigger: ACCCCATCTTCTCTCAGAGCAATGAACTGTATCTGC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCTAATATACCTTCGTTaGCCAAAAGAGTCCCTCCAC +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLIYLR*PKESLH
Trigger: GTGGAGGGACTCTTTTGGGCAACGAAGGTATATTAG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGATACAATGTCTTTACTaGAACGAATGGGAGCAGGTG +
Preference number: 4 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAIQCLY*NEWEQV
Trigger: CACCTGCTCCCATTCGTTCCAGTAAAGACATTGTAT...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGATTTATCGTAGGGATTTaGGTAATTTATGCTCTCCAA +
Preference number: 4 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRFIVGI*VIYALQ
Trigger: TTGGAGAGCATAAATTACCCAAATCCCTACGATAAA...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTATCCCCTTCCTGACTTaGAAGAGTCAGAAGAAAACT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVIPFLT*KSQKKT
Trigger: AGTTTTCTTCTGACTCTTCCAAGTCAGGAAGGGGAT...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCATCTCCTCAGATTaGAAGACAGCAGTGAAAATG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDGISSD*KTAVKM
Trigger: CATTTTCACTGCTGTCTTCCAATCTGAGGAGATGCC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGTTGCATACTCCGCATaGAATCTTATGAAGACCCGA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDVAYSA*NLMKTR
Trigger: TCGGGTCTTCATAAGATTCCATGCGGAGTATGCAAC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTTCTGCTGTAAGCTTTaGAAATCTCTCTCAAGATCC +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGFCCKL*KSLSRS
Trigger: GGATCTTGAGAGAGATTTTCAAAGCTTACAGCAGAA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTGTCTCCATCTTTTATaGTCAGCTTGTCATAGGAAC +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCCLHLL*SACHRN
Trigger: GTTCCTATGACAAGCTGATCATAAAAGATGGAGACA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTTTCATTGTCTGAGGTaGAGAGAGTTGATGGAGTAT +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGFHCLR*RELMEY
Trigger: ATACTCCATCAACTCTCTTCACCTCAGACAATGAAA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCCACGACTTTGCCCTTaGTTGTTTGTGTTAAAGGTT +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDPRLCP*LFVLKV
Trigger: AACCTTTAACACAAACAATCAAGGGCAAAGTCGTGG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCAATGAGGAGATTTaGTTGTACCATTATCTGAGT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVANEEI*LYHYLS
Trigger: ACTCAGATAATGGTACAATCAAATCTCCTCATTGGC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCAACCTCTTGCTGTTTaGGAAGAATCTGTCTTGAAT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCQPLAV*EESVLN
Trigger: ATTCAAGACAGATTCTTCTCAAACAGCAAGAGGTTG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTATGTCAGAGACAAATTaGACTGTAAGAAAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGMSETN*TVRKLP
Trigger: TGGCAACTTTCTTACAGTTCAATTTGTCTCTGACAT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCTGCTGGACTTAAATTaGAGCCTAAATCCTGAGTCA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLLDLN*SLNPES
Trigger: TGACTCAGGATTTAGGCTGCAATTTAAGTCCAGCAG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCACAGTCATTATATTTaGATGCACACTGAGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVHSHYI*MHTEVH
Trigger: ATGGACCTCAGTGTGCATCCAAATATAATGACTGTG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCATAATTTCATATCCATaGTGGGTGTCTGAGTCATCG +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGIISYP*WVSESS
Trigger: CGATGACTCAGACACCCACCATGGATATGAAATTAT...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCCGTTTTATGTATTCTaGGTAGAGATGGAAATAGAG +
Preference number: 4 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVPFYVF*VEMEIE
Trigger: CTCTATTTCCATCTCTACTCAGAATACATAAAACGG...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCATTATTTCAAATCCTaGAGAAACGGTTGCATACTC +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCHYFKS*RNGCIL
Trigger: GAGTATGCAACCGTTTCTTCAGGATTTGAAATAATG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTACTTTCCAACCTCTTaGTGTTTGAGAAGAATCTGT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCYFPTS*CLRRIC
Trigger: ACAGATTCTTCTCAAACAGCAAGAGGTTGGAAAGTA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCAGGACTCTTTAGATTaGCAAATGCTTGGTTGTATT +
Preference number: 4 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCQDSLD*QMLGCI
Trigger: AATACAACCAAGCATTTGGCAATCTAAAGAGTCCTG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTTGCTTCATAATTTATaGAAAAGCCTTCGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGLLHNL*KSLRGQ
Trigger: TTGCCCACGAAGGCTTTTCCATAAATTATGAAGCAA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTTGATACTGTTTCAATaGACTGTCCATTTACACACG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLILFQ*TVHLHT
Trigger: CGTGTGTAAATGGACAGTGCATTGAAACAGTATCAA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCATGATGGTATGTTTGTaGCACAAAACTTCTCATTTC +
Preference number: 4 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGMMVCL*HKTSHF
Trigger: GAAATGAGAAGTTTTGTGGCACAAACATACCATCAT...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTTATGCTCTCCAAGATaGCAGAGGTTTTATTCACTA +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLCSPR*QRFYSL
Trigger: TAGTGAATAAAACCTCTGGCATCTTGGAGAGCATAA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAAAGTCTGTGATATATaGGTCAGAATAGAAGTTGAG +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDKVCDI*VRIEVE
Trigger: CTCAACTTCTATTCTGACGCATATATCACAGACTTT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCTAAATATGAGTTTATaGTTGCACCATCTGCTATCT +
Preference number: 4 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDLNMSL*LHHLLS
Trigger: AGATAGCAGATGGTGCAAGCATAAACTCATATTTAG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTACCTCGATGAAAGTGTaGGAACAGCCCCTCTGGCTC +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTTSMKV*EQPLWL
Trigger: GAGCCAGAGGGGCTGTTCTCACACTTTCATCGAGGT...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCTTGCCAAGCAGTGGTaGACTGCTGCTGCTGCCATT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTLAKQW*TAAAAI
Trigger: AATGGCAGCAGCAGCAGTTCACCACTGCTTGGCAAG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGAGAGAAGATGGGGTTaGGCAGCAGGTTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTERRWG*AAGCCS
Trigger: ACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTACTGTCTGCTGTGACTaGAAGGTCCAGTCAAGGGAG +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTTVCCD*KVQSRE
Trigger: CTCCCTTGACTGGACCTTTCAGTCACAGCAGACAGT...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGGAAATAGAGAGAGTTaGCACTGCTGTGGACCCCCT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTGNRES*HCCGPP
Trigger: AGGGGGTCCACAGCAGTGCCAACTCTCTCTATTTCC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGTGAAGGCTGGAGGCTaGATTCATCTTTGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTVKAGG*IHLCPL
Trigger: CAGAGGACAAAGATGAATGCAGCCTCCAGCCTTCAC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTATCACCACTGAAACCTaGTGGACAGTTCCCACAGGT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTITTET*WTVPTG
Trigger: ACCTGTGGGAACTGTCCAGCAGGTTTCAGTGGTGAT...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGTAAATCCTCGCAGATaGCATGCTTACAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTVNPRR*HAYRAA
Trigger: AGCAGCTCTGTAAGCATGGCATCTGCGAGGATTTAC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCGTGTTGCCTGTTGTTaGTTGGATGGTCCAGTTACA +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTRVACC*LDGPVT
Trigger: TGTAACTGGACCATCCAAGCAACAACAGGCAACACG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTTCCAGGTGGAAGTCTTaGAATTCAAGCAGGAAAGGG +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTSRWKS*NSSRKG
Trigger: CCCTTTCCTGCTTGAATTCCAAGACTTCCACCTGGA...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCCTTGGATATGCCACTaGCAAAACACGTTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTPWICH*QNTLFA
Trigger: TGCAAACAACGTGTTTTGTCAGTGGCATATCCAAGG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR GCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGGCAGGGATTGCTACTaGAAACTTTTCTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTGRDCY*KLFSPH
Trigger: ATGTGGAGAGAAAAGTTTGCAGTAGCAATCCCTGCC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTTTGCCTGTTGTTGCTTaGATGGTCCAGTTACAACGT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTLPVVA*MVQLQR
Trigger: ACGTTGTAACTGGACCATCCAAGCAACAACAGGCAA...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGACGTGCAAGTTGGATaGTTCTCCACACTAAAGTCA +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTDVQVG*FSTLKS
Trigger: TGACTTTAGTGTGGAGAACCATCCAACTTGCACGTC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCAACCAGGGGAGCTCTaGAGGTTAAAATCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTQPGEL*RLKSSK
Trigger: TTTTGAAGATTTTAACCTTCAGAGCTCCCCTGGTTG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCTACACGTTCATTGCTaGCAAAATGTATCCACACCT +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTLHVHC*QNVSTP
Trigger: AGGTGTGGATACATTTTGTCAGCAATGAACGTGTAG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTGATTGTACCATTATCTaGGTGAAGTGTTCCACCACA +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTDCTII*VKCSTT
Trigger: TGTGGTGGAACACTTCACTCAGATAATGGTACAATC...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCATCATCATTTAATTTaGTTTTCCCCAGGGAACCAG +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTHHHLI*FSPGNQ
Trigger: CTGGTTCCCTGGGGAAAATCAAATTAAATGATGATG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR TCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTATCAGCTTTATTGAATaGGAGCTGCTGGTAAGAGAA +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTISFIE*ELLVRE
Trigger: TTCTCTTACCAGCAGCTCTCATTCAATAAAGCTGAT...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CCA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTCTAAATTCAATGTTTTaGGCAGAGCTTGTAAGAAAC +
Preference number: 4 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTLNSMF*AELVRN
Trigger: GTTTCTTACAAGCTCTGCCCAAAACATTGAATTTAG...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAGTACCCACCACACCCTaGCTGTGGTCCTATTGTCTC +
Preference number: 5 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTVPTTP*LWSYCL
Trigger: GAGACAATAGGACCACAGCAAGGGTGTGGTGGGTAC...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGTAGCGTCCTATCCGTaGTGGTCCATCATAGAGCTC +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRVASYP*WSIIEL
Trigger: GAGCTCTATGATGGACCACAACGGATAGGACGCTAC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAACATGTATTCTCCAGTaGAGCGGATGGGTCCGGGAA +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRTCILQ*SGWVRE
Trigger: TTCCCGGACCCATCCGCTCAACTGGAGAATACATGT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAAGGTTGCTGCAGTACTaGCCAAGCAGTGGTGAACTG +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRRLLQY*PSSGEL
Trigger: CAGTTCACCACTGCTTGGCAAGTACTGCAGCAACCT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCACTCTTGCCTGAATaGAGCTCGGAAGCCCCTGCT +
Preference number: 5 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVALLPE*SSEAPA
Trigger: AGCAGGGGCTTCCGAGCTCAATTCAGGCAAGAGTGC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTGGGCTCCGCACTCTaGCCTGAATTGAGCTCGGAA +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCVGSAL*PELSSE
Trigger: TTCCGAGCTCAATTCAGGCAAGAGTGCGGAGCCCAC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GGTGGTGTTCCAGGTGGAAGTCTTGGAATTCAAGCAGGAAAGGGCTaGCACGGCTGGCTTCCAGCCGCCAGTAGCATTCGGAGCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GGVPGGSLGIQAGKG*HGWLPAASSIRSCG
Trigger: ACCACAGCTCCGAATGCTACTGGCGGCTGGAAGCCAGCCGTGGCAGCCCTTTCCTGCTTGAATTCCAAGACTTCCACCTGGAACACCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CCAGGTGGAAGTCTTGGAATTCAAGCAGGAAAGGGCTGCCACGGCTaGCTTCCAGCCGCCAGTAGCATTCGGAGCTGTGGTAGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: PGGSLGIQAGKGCHG*LPAASSIRSCGSRA
Trigger: TGCCCTACTACCACAGCTCCGAATGCTACTGGCGGCTGGAAGCCAGCCGTGGCAGCCCTTTCCTGCTTGAATTCCAAGACTTCCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGAAGGAGTCGTGCAGGTaGACACAGGTGCCACCATTG +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAKESCR*TQVPPL
Trigger: CAATGGTGGCACCTGTGTCAACCTGCACGACTCCTT...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGTTGGTAACCATTTCCTaGCCAACCTTTTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGLVTIS*PTFWAG
Trigger: GCCTGCCCAAAAGGTTGGCAAGGAAATGGTTACCAA...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAGTTGATATCCTGGCATaGGTAACCATTTCCTTGCCA +
Preference number: 5 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTVDILA*VTISLP
Trigger: TGGCAAGGAAATGGTTACCAATGCCAGGATATCAAC...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCAAGAGGAGGAACAGGTaGCATCTGGATGGCAGCCTC +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCKRRNR*HLDGSL
Trigger: GAGGCTGCCATCCAGATGCAACCTGTTCCTCCTCTT...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACGCTTGGGTAGACATTaGGATGACCAGGACTTTCAA +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRRLGRH*DDQDFQ
Trigger: TTGAAAGTCCTGGTCATCCAAATGTCTACCCAAGCG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTCTCAAAGCCACGTCCTaGTTGACCTGCATCAGTCCT +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGLKATS*LTCISP
Trigger: AGGACTGATGCAGGTCAACAAGGACGTGGCTTTGAG...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATGGCATCTCCTCAGATaGGAAGACAGCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTWHLLR*EDSSEN
Trigger: ATTTTCACTGCTGTCTTCCAATCTGAGGAGATGCCA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTGCAGGAGATACCATTaGGCAGTGTTGTCCACCCAG +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCCRRYH*AVLSTQ
Trigger: CTGGGTGGACAACACTGCCAAATGGTATCTCCTGCA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTTCCTTGCCAACCTTTaGGGCAGGCGCCACAGTAGA +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDFLANL*GRRHSR
Trigger: TCTACTGTGGCGCCTGCCCAAAAGGTTGGCAAGGAA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTGCCTCCACAGCCTGTaGATGACGCATCCCAGTAAG +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDCLHSL*MTHPSK
Trigger: CTTACTGGGATGCGTCATCAACAGGCTGTGGAGGCA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCCCGTGTTGCCTGTTGTaGCTTGGATGGTCCAGTTAC +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCPCCLL*LGWSSY
Trigger: GTAACTGGACCATCCAAGCAACAACAGGCAACACGG...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTCACCGTGTTGCCTGTaGTTGCTTGGATGGTCCAGT +
Preference number: 5 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGSPCCL*LLGWSS
Trigger: ACTGGACCATCCAAGCAACAACAGGCAACACGGTGA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTGGCGACACGGGTGTTaGCAGAACTTGAGCCATCAT +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAWRHGC*QNLSHH
Trigger: ATGATGGCTCAAGTTCTGCAAACACCCGTGTCGCCA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACAGCAATCTGTGCTGCTTaGCAGATGAAAGTGAGTAAA +
Preference number: 5 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTAICAA*QMKVSK
Trigger: TTTACTCACTTTCATCTGCAAAGCAGCACAGATTGC...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTCCACCACAGCTCTTTaGAAAGGAGGCGTTGAAGCC +
Preference number: 5 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGSTTAL*KGGVEA
Trigger: GGCTTCAACGCCTCCTTTCAAAAGAGCTGTGGTGGA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACATCATGTGAGCAAAGGTaGGAGGGAACAATCTCAAAA +
Preference number: 5 (lower is better)
Translates to: AGLRVASDGAGQSQRGYTSCEQR*EGTISK
Trigger: TTTTGAGATTGTTCCCTCCAACCTTTGCTCACATGA...TGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAACCCGCAACCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGGTGCTCTTAATAACTaGTGGAAGTGTGGAACCACA +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRGALNN*WKCGTT
Trigger: TGTGGTTCCACACTTCCACAAGTTATTAAGAGCACC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGTTCTAAGGAGCTCCTaGAGCAGTCTTGTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVVLRSS*SSLVRA
Trigger: TGCCCTCACAAGACTGCTCAAGGAGCTCCTTAGAAC...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAGCAGAACTGAGTCACTaGGTTTCCATTAGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRAELSH*VSISLF
Trigger: GAACAGACTAATGGAAACCAAGTGACTCAGTTCTGC...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp TCTCCCATCACCACTGAAACCTGCTGGACAGTTCCCACAGGTGAATaGTCCTGGAGTGTTCAGGCAGGGGACCAGTGGAGCCTGGGAACA +
Preference number: 5 (lower is better)
Translates to: SPITTETCWTVPTGE*SWSVQAGDQWSLGT
Trigger: TGTTCCCAGGCTCCACTGGTCCCCTGCCTGAACACTCCAGGATCATTCACCTGTGGGAACTGTCCAGCAGGTTTCAGTGGTGATGGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTAGGCTGCATTCATCTTaGTCCTCTGTGCAGGAGATA +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGRLHSS*SSVQEI
Trigger: TATCTCCTGCACAGAGGACAAAGATGAATGCAGCCT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTCCAGGTGGAAGTCTaGGAATTCAAGCAGGAAAGG +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGFQVEV*EFKQER
Trigger: CCTTTCCTGCTTGAATTCCAAGACTTCCACCTGGAA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAAAGCCACGTCCTTGTaGACCTGCATCAGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDKATSL*TCISPQ
Trigger: CTGAGGACTGATGCAGGTCAACAAGGACGTGGCTTT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTTGCCTGTTGTTGCTaGGATGGTCCAGTTACAACG +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCVACCC*DGPVTT
Trigger: CGTTGTAACTGGACCATCCAAGCAACAACAGGCAAC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCCAGGCCAGAATGGAGTaGCGATTTTCCCATGAGTTC +
Preference number: 5 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGQARME*RFSHEF
Trigger: GAACTCATGGGAAAATCGCAACTCCATTCTGGCCTG...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGCTAAAGGATTCTCTTaGGGTACCACAGTAAGTGCC +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGAKGFS*GTTVSA
Trigger: GGCACTTACTGTGGTACCCAAAGAGAATCCTTTAGC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGATCCATGGAGAGAATGTaGAGTTCCACAGTAGAATCA +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRSMERM*SSTVES
Trigger: TGATTCTACTGTGGAACTCAACATTCTCTCCATGGA...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGACATTCATGCATTGTCTaGAATCTTCCAGCTGAAACC +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRHSCIV*NLPAET
Trigger: GGTTTCAGCTGGAAGATTCAAGACAATGCATGAATG...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGTGATGTGGAAGCCTTaGTCACTAGTCTCGGAGTCA +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDVMWKP*SLVSES
Trigger: TGACTCCGAGACTAGTGACAAAGGCTTCCACATCAC...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGACAACTGGGCTATTCTaGGAGAGTGAAAATCAAGAC +
Preference number: 5 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGTTGLF*ESENQD
Trigger: GTCTTGATTTTCACTCTCCAAGAATAGCCCAGTTGT...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGCTCGCCATGAGGCATaGAAACCTCTTCCATTTAAA +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGARHEA*KPLPFK
Trigger: TTTAAATGGAAGAGGTTTCAATGCCTCATGGCGAGC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTTGCGTCTGACGGCGCGGGGCAGAGCCAGAGGGGTTACACACAGCTCTCCCGAATGATTGAATGGAGGTaGAGCTTCAATTATCCAGGT +
Preference number: 5 (lower is better)
Translates to: VASDGAGQSQRGYTQLSRMIEWR*SFNYPG
Trigger: ACCTGGATAATTGAAGCTCAACCTCCATTCAATCAT...TCGGGAGAGCTGTGTGTAACCCCTCTGGCTCTGCCCCGCGCCGTCAGACGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACAGTGCTTTGGGAAGTTaGGAGAGACGATGTCACCTG +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDSALGS*ERRCHL
Trigger: CAGGTGACATCGTCTCTCCAAACTTCCCAAAGCACT...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp TGCTCTGAGAGAAGATGGGGTTGGGCAGCAGGTTGCTGCAGTACTTaGCAAGCAGTGGTGAACTGCTGCTGCTGCCATTTCTTACCTCCA +
Preference number: 5 (lower is better)
Translates to: CSERRWGWAAGCCST*QAVVNCCCCHFLPP
Trigger: TGGAGGTAAGAAATGGCAGCAGCAGCAGTTCACCACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp ACAGAAGAGGAGGAACAGGTTGCATCTGGATGGCAGCCTCCATTATaGATCGAGCAGATGTCCAAGGGGGTGCACACTCTCCCATCACCA +
Preference number: 5 (lower is better)
Translates to: TEEEEQVASGWQPPL*IEQMSKGVHTLPSP
Trigger: TGGTGATGGGAGAGTGTGCACCCCCTTGGACATCTGCTCGATCCATAATGGAGGCTGCCATCCAGATGCAACCTGTTCCTCCTCTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTACAGTAGAAGGAACCTaGTGTATTGAAACACTGTGC +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGTVEGT*CIETLC
Trigger: GCACAGTGTTTCAATACACAAGGTTCCTTCTACTGT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCTCCACGTGGGTGAAGTaGATAACTATTTGCTCTCCT +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCSTWVK*ITICSP
Trigger: AGGAGAGCAAATAGTTATCAACTTCACCCACGTGGA...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTGCCAAATATATTTTaGAATCTGGCCTGGAAGCCC +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGLPNIF*NLAWKP
Trigger: GGGCTTCCAGGCCAGATTCAAAAATATATTTGGCAA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCAACTCAAGATAGCTaGCAGAACAGTTGGGTGTTT +
Preference number: 5 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGATQDS*QNSWVF
Trigger: AAACACCCAACTGTTCTGCAAGCTATCTTGAGTTGC...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGAAGATTTGAACTCATaGGTCACATTCACACGGCTG +
Preference number: 5 (lower is better)
Translates to: VGRDGDENHRVLGRVAGCEDLNS*VTFTRL
Trigger: CAGCCGTGTGAATGTGACCAATGAGTTCAAATCTTC...GCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTGTTGTCATAGTGCTTaGGGAAGTTTGGAGAGACGA +
Preference number: 5 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGCCHSA*GSLERR
Trigger: TCGTCTCTCCAAACTTCCCAAAGCACTATGACAACA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGGTGAGCTTAACAAGTTaGTTTTCAGGGGCAATTATG +
Preference number: 5 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGVSLTS*FSGAIM
Trigger: CATAATTGCCCCTGAAAACAAACTTGTTAAGCTCAC...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACTCAGGAAAGCCAGGGTaGGCTAATATACCTTCGTTG +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDSGKPG*ANIPSL
Trigger: CAACGAAGGTATATTAGCCAACCCTGGCTTTCCTGA...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp TCTGAAGAGTCAGTAATGATGTGGGCTCCGCACTCTTGCCTGAATTaGGCTCGGAAGCCCCTGCTCTGGCTGGAAGATCCAGACTGGAAT +
Preference number: 5 (lower is better)
Translates to: SEESVMMWAPHSCLN*ARKPLLWLEDPDWN
Trigger: ATTCCAGTCTGGATCTTCCAGCCAGAGCAGGGGCTTCCGAGCTCAATTCAGGCAAGAGTGCGGAGCCCACATCATTACTGACTCTTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp ACAGTTCATTGCTCTGAGAGAAGATGGGGTTGGGCAGCAGGTTGCTaGAGTACTTGCCAAGCAGTGGTGAACTGCTGCTGCTGCCATTTC +
Preference number: 5 (lower is better)
Translates to: TVHCSERRWGWAAGC*STCQAVVNCCCCHF
Trigger: GAAATGGCAGCAGCAGCAGTTCACCACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCAATGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GGTGGGTGTCTGAGTCATCGCTGTGGAAGTGCAGATACAGTTCATTaGTCTGAGAGAAGATGGGGTTGGGCAGCAGGTTGCTGCAGTACT +
Preference number: 5 (lower is better)
Translates to: GGCLSHRCGSADTVH*SERRWGWAAGCCST
Trigger: AGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCAATGAACTGTATCTGCACTTCCACAGCGATGACTCAGACACCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CAGGTGAATGATCCTGGAGTGTTCAGGCAGGGGACCAGTGGAGCCTaGGAACAGCCACCATTGTTGATCTCACATTCGTTGATATCCTGG +
Preference number: 5 (lower is better)
Translates to: QVNDPGVFRQGTSGA*EQPPLLISHSLISW
Trigger: CCAGGATATCAACGAATGTGAGATCAACAATGGTGGCTGTTCCCAGGCTCCACTGGTCCCCTGCCTGAACACTCCAGGATCATTCACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp AACAAGGACCCTAGAACAGAAGAGGAGGAACAGGTTGCATCTGGATaGCAGCCTCCATTATGGATCGAGCAGATGTCCAAGGGGGTGCAC +
Preference number: 5 (lower is better)
Translates to: NKDPRTEEEEQVASG*QPPLWIEQMSKGVH
Trigger: GTGCACCCCCTTGGACATCTGCTCGATCCATAATGGAGGCTGCCATCCAGATGCAACCTGTTCCTCCTCTTCTGTTCTAGGGTCCTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTAAGGAACCTTGTGTATaGAAACACTGTGCATGTTCT +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGKEPCV*KHCACS
Trigger: AGAACATGCACAGTGTTTCAATACACAAGGTTCCTT...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGGAACAGCCACCATTGTaGATCTCACATTCGTTGATA +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAEQPPL*ISHSLI
Trigger: TATCAACGAATGTGAGATCAACAATGGTGGCTGTTC...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTACAATTTACACCGCTaGGGTAGACATTTGGATGAC +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAYNLHR*GRHLDD
Trigger: GTCATCCAAATGTCTACCCAAGCGGTGTAAATTGTA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGTCATACTTGCAGCTaGCATGATATTCCACATCAA +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGCHTCS*HDIPHQ
Trigger: TTGATGTGGAATATCATGCAAGCTGCAAGTATGACA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTGTGATATTTCTCAACTaGAATGATCCAAGAGCACTC +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGVIFLN*NDPRAL
Trigger: GAGTGCTCTTGGATCATTCAAGTTGAGAAATATCAC...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCGCGGGGTATTCTACACGTTCATaGCTGACAAAATGTATCCAC +
Preference number: 5 (lower is better)
Translates to: MRTTEFWAGLRVASDGAGYSTRS*LTKCIH
Trigger: GTGGATACATTTTGTCAGCAATGAACGTGTAGAATA...CCCCGCGCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTTCCACGACTTTGCCCTaGATTGTTTGTGTTAAAGGT +
Preference number: 5 (lower is better)
Translates to: AWAEMGMRTTEFWAGLRVSTTLP*IVCVKG
Trigger: ACCTTTAACACAAACAATCAAGGGCAAAGTCGTGGA...AACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCCAGAGTAAATGCATaGAAGGTGAGCTTAACAAGT +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGSRVNA*KVSLTS
Trigger: ACTTGTTAAGCTCACCTTCAATGCATTTACTCTGGA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GTGTCTGAGTCATCGCTGTGGAAGTGCAGATACAGTTCATTGCTCTaGGAGAAGATGGGGTTGGGCAGCAGGTTGCTGCAGTACTTGCCA +
Preference number: 5 (lower is better)
Translates to: VSESSLWKCRYSSLL*EKMGLGSRLLQYLP
Trigger: TGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCAATGAACTGTATCTGCACTTCCACAGCGATGACTCAGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GACTTGGAGCCACATTCCCACAGCTTGTGGCTAACAGGGCATCGTTaGTCTCTAACATTCCTTCCCAGACCTTCACAAAGCTGTTCCGAC +
Preference number: 5 (lower is better)
Translates to: DLEPHSHSLWLTGHR*SLTFLPRPSQSCSD
Trigger: GTCGGAACAGCTTTGTGAAGGTCTGGGAAGGAATGTTAGAGACCAACGATGCCCTGTTAGCCACAAGCTGTGGGAATGTGGCTCCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GGCGTGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTCATCATCATTTAATTaGATTTTCCCCAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: GVGRDGDENHRVLGRVAGSSSFN*IFPREP
Trigger: TGGTTCCCTGGGGAAAATCAAATTAAATGATGATGA...ACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp GAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACCAAAATCTACACACTTaGGCCCAAAATAGTCCTCCA +
Preference number: 5 (lower is better)
Translates to: EMGMRTTEFWAGLRVASDQNLHT*AQNSPP
Trigger: TGGAGGACTATTTTGGGCCAAAGTGTGTAGATTTTG...GTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGATCAAATGTACAGTCTaGATGACTTTCGAGGGAAAG +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAIKCTV*MTFEGK
Trigger: CTTTCCCTCGAAAGTCATCAAGACTGTACATTTGAT...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GTGATGTGGAAGCCTTTGTCACTAGTCTCGGAGTCAGAATGGAAATaGATTCTTGCTGCGGGACCTGTAGTCTGGAGTGGTGGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: VMWKPLSLVSESEWK*ILAAGPVVWSGGVD
Trigger: GTCTACCCCACCACTCCAGACTACAGGTCCCGCAGCAAGAATTCATTTCCATTCTGACTCCGAGACTAGTGACAAAGGCTTCCACATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp CAGAATCAGAGACAAACCTCACTGTCAGGGCATTGCCAAATGATATaGTGGGATGGGGCAGAGAGGTACCACAGTAACGGCCTTGGACAG +
Preference number: 5 (lower is better)
Translates to: QNQRQTSLSGHCQMI*WDGAERYHSNGLGQ
Trigger: CTGTCCAAGGCCGTTACTGTGGTACCTCTCTGCCCCATCCCATCATATCATTTGGCAATGCCCTGACAGTGAGGTTTGTCTCTGATTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp CTGAACAAGGTGAAGGCTGGAGGCTGCATTCATCTTTGTCCTCTGTaGAGGAGATACCATTTGGCAGTGTTGTCCACCCAGCATCACAGA +
Preference number: 5 (lower is better)
Translates to: LNKVKAGGCIHLCPL*RRYHLAVLSTQHHR
Trigger: TCTGTGATGCTGGGTGGACAACACTGCCAAATGGTATCTCCTGCACAGAGGACAAAGATGAATGCAGCCTCCAGCCTTCACCTTGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp CTCACAAAGAGGCTGTTTCCTGAAGAGGTGATGGAATTAGGTGGCTaGTGTCTTCCACACACAGTGGCGACACGGGTGTTTGCAGAACTT +
Preference number: 5 (lower is better)
Translates to: LTKRLFPEEVMELGG*CLPHTVATRVFAEL
Trigger: AAGTTCTGCAAACACCCGTGTCGCCACTGTGTGTGGAAGACAGCAGCCACCTAATTCCATCACCTCTTCAGGAAACAGCCTCTTTGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GAGAGGTACCACAGTAACGGCCTTGGACAGGTGCATCAGAGTCTCTaGCATCCAAAATTTCTACAAAGTCCCGTGTGCAATCTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: ERYHSNGLGQVHQSL*HPKFLQSPVCNLCC
Trigger: GCAGCACAGATTGCACACGGGACTTTGTAGAAATTTTGGATGGCAGAGACTCTGATGCACCTGTCCAAGGCCGTTACTGTGGTACCTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp ACCTGTAGAGCTATTGAATGTACGTCCACAACGGCTAATGAAGGATaGAGAGAAGCCCTGGGCTGGCATCTCCTCAGATTGGAAGACAGC +
Preference number: 5 (lower is better)
Translates to: TCRAIECTSTTANEG*REALGWHLLRLEDS
Trigger: GCTGTCTTCCAATCTGAGGAGATGCCAGCCCAGGGCTTCTCTGCATCCTTCATTAGCCGTTGTGGACGTACATTCAATAGCTCTACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GACACAAAGCTCTTGCTGTCCTCAGTCAGGTACCCACCACACCCTTaGTGTGGTCCTATTGTCTCCCGGAAAGATACTTTCCAACCTCTT +
Preference number: 5 (lower is better)
Translates to: DTKLLLSSVRYPPHP*CGPIVSRKDTFQPL
Trigger: AAGAGGTTGGAAAGTATCTTTCCGGGAGACAATAGGACCACAGCAAGGGTGTGGTGGGTACCTGACTGAGGACAGCAAGAGCTTTGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CCTCCACAGCCAGTAGGAGAGGAGGCCCAGATAATTTCATATCCATaGTGGGTGTCTGAGTCATCGCTGTGGAAGTGCAGATACAGTTCA +
Preference number: 5 (lower is better)
Translates to: PPQPVGEEAQIISYP*WVSESSLWKCRYSS
Trigger: TGAACTGTATCTGCACTTCCACAGCGATGACTCAGACACCCACCATGGATATGAAATTATCTGGGCCTCCTCTCCTACTGGCTGTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp ATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTCTGACGGCTCTGATCTTAAATCCTaGTCCACCGTTACTATTATC +
Preference number: 5 (lower is better)
Translates to: MGMRTTEFWAGLRVASDGSDLKS*STVTII
Trigger: GATAATAGTAACGGTGGACAAGGATTTAAGATCAGA...GCCGTCAGACGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGGTACTTAGCCTCAAATaGGTAAAAGTGAGGATAATC +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAVLSLK*VKVRII
Trigger: GATTATCCTCACTTTTACCAATTTGAGGCTAAGTAC...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTTGTTTCTAATGCCATaGAATACAATGAGGTGCTCA +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVALFLMP*NTMRCS
Trigger: TGAGCACCTCATTGTATTCAATGGCATTAGAAACAA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp TGGGCAGAGATGGGGATGAGAACCACAGAGTTCTGGGCAGGGTTGCGGGTTGCGTATGTCAGAGACAAATaGAACTGTAAGAAAGTTGCC +
Preference number: 5 (lower is better)
Translates to: WAEMGMRTTEFWAGLRVAYVRDK*NCKKVA
Trigger: GGCAACTTTCTTACAGTTCAATTTGTCTCTGACATA...CGCAACCCGCAACCCTGCCCAGAACTCTGTGGTTCTCATCCCCATCTCTGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp CTGGCTGGAAGATCCAGACTGGAATCTCACAAAGAGGCTGTTTCCTaGAGAGGTGATGGAATTAGGTGGCTGCTGTCTTCCACACACAGT +
Preference number: 5 (lower is better)
Translates to: LAGRSRLESHKEAVS*RGDGIRWLLSSTHS
Trigger: ACTGTGTGTGGAAGACAGCAGCCACCTAATTCCATCACCTCTTCAGGAAACAGCCTCTTTGTGAGATTCCAGTCTGGATCTTCCAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GTACACAGAATCAGAGACAAACCTCACTGTCAGGGCATTGCCAAATaGTATGATGGGATGGGGCAGAGAGGTACCACAGTAACGGCCTTG +
Preference number: 5 (lower is better)
Translates to: VHRIRDKPHCQGIAK*YDGMGQRGTTVTAL
Trigger: CAAGGCCGTTACTGTGGTACCTCTCTGCCCCATCCCATCATATCATTTGGCAATGCCCTGACAGTGAGGTTTGTCTCTGATTCTGTGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GAAGCCTTTGTCACTAGTCTCGGAGTCAGAATGGAAATGAATTCTTaGTGCGGGACCTGTAGTCTGGAGTGGTGGGGTAGACAGAGAAGT +
Preference number: 5 (lower is better)
Translates to: EAFVTSLGVRMEMNS*CGTCSLEWWGRQRS
Trigger: ACTTCTCTGTCTACCCCACCACTCCAGACTACAGGTCCCGCAGCAAGAATTCATTTCCATTCTGACTCCGAGACTAGTGACAAAGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp CCCATGGTTCCAGACATCTCTCCACCACAGCCATGGATGAACCAGTaGATCTTAAATCCTTTCTCTCCAGAGTCAACCCCATCTGTATGG +
Preference number: 5 (lower is better)
Translates to: PMVPDISPPQPWMNQ*ILNPFSPESTPSVW
Trigger: CCATACAGATGGGGTTGACTCTGGAGAGAAAGGATTTAAGATGCACTGGTTCATCCATGGCTGTGGTGGAGAGATGTCTGGAACCATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GAGCAGGTGGTGTATCCCCACATAGTTTATTTATCAGACGGGAGTTaGTACTCGGGCCATCAAACACGGCCAAGTAATCCAGAGAGCAGT +
Preference number: 5 (lower is better)
Translates to: EQVVYPHIVYLSDGS*YSGHQTRPSNPESS
Trigger: ACTGCTCTCTGGATTACTTGGCCGTGTTTGATGGCCCGAGTACCAACTCCCGTCTGATAAATAAACTATGTGGGGATACACCACCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CCACAGCCAGTAGGAGAGGAGGCCCAGATAATTTCATATCCATGGTaGGTGTCTGAGTCATCGCTGTGGAAGTGCAGATACAGTTCATTG +
Preference number: 5 (lower is better)
Translates to: PQPVGEEAQIISYPW*VSESSLWKCRYSSL
Trigger: CAATGAACTGTATCTGCACTTCCACAGCGATGACTCAGACACCCACCATGGATATGAAATTATCTGGGCCTCCTCTCCTACTGGCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GCCTTCGTGGGCAAGAGCAGAGTCAGACACGAATATCAGCTTTATTaGATGAGAGCTGCTGGTAAGAGAAGGCGGGATGGATTTTCCACA +
Preference number: 5 (lower is better)
Translates to: AFVGKSRVRHEYQLY*MRAAGKRRRDGFST
Trigger: TGTGGAAAATCCATCCCGCCTTCTCTTACCAGCAGCTCTCATTCAATAAAGCTGATATTCGTGTCTGACTCTGCTCTTGCCCACGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GTTGTTTGGATAGTTGGCTGGGTACAGTGGAGAGGAGATGCTATCTaGAGAGTCAGTAATGATGTGGGCTCCGCACTCTTGCCTGAATTG +
Preference number: 5 (lower is better)
Translates to: VVWIVGWVQWRGDAI*RVSNDVGSALLPEL
Trigger: CAATTCAGGCAAGAGTGCGGAGCCCACATCATTACTGACTCTTCAGATAGCATCTCCTCTCCACTGTACCCAGCCAACTATCCAAACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GTCATCCGAGGCTGGTGGAGATCAGCAATTCTTTTCTGTAGCTTCTaGTCTGGTGTTCCAGTTTCACCGTCTAATCCGGGTACCATCAAT +
Preference number: 5 (lower is better)
Translates to: VIRGWWRSAILFCSF*SGVPVSPSNPGTIN
Trigger: ATTGATGGTACCCGGATTAGACGGTGAAACTGGAACACCAGAGCAGAAGCTACAGAAAAGAATTGCTGATCTCCACCAGCCTCGGATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CATGCTTACAGAGCTGCTGAGAGCCCTGTTCACAGTCATTATATTTaGATGCACACTGAGGTCCATACGTATCAGGCGTGCAGTCACATC +
Preference number: 5 (lower is better)
Translates to: HAYRAAESPVHSHYI*MHTEVHTYQACSHI
Trigger: GATGTGACTGCACGCCTGATACGTATGGACCTCAGTGTGCATCCAAATATAATGACTGTGAACAGGGCTCTCAGCAGCTCTGTAAGCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GTCAGAATGGAAATGAATTCTTGCTGCGGGACCTGTAGTCTGGAGTaGTGGGGTAGACAGAGAAGTACAGAATTTCCCAAGAATGGGGTC +
Preference number: 5 (lower is better)
Translates to: VRMEMNSCCGTCSLE*WGRQRSTEFPKNGV
Trigger: GACCCCATTCTTGGGAAATTCTGTACTTCTCTGTCTACCCCACCACTCCAGACTACAGGTCCCGCAGCAAGAATTCATTTCCATTCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GCTGGCAATGTTCCAGACACATTCTGTATTAGAATGGTAGTCTTCTaGGTAGCCAGGGCTATTGAAGATGCCATCGCCCGTGTAGAAGGT +
Preference number: 5 (lower is better)
Translates to: AGNVPDTFCIRMVVF*VARAIEDAIARVEG
Trigger: ACCTTCTACACGGGCGATGGCATCTTCAATAGCCCTGGCTACCCAGAAGACTACCATTCTAATACAGAATGTGTCTGGAACATTGCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CTCTTGAGGATACCCAGTTTCGAGGCAAAGTGTGCCCACACAATTTaGAAAGCACAGGTGCATTTGAGTTGGCTCCATCACGCAACTCAA +
Preference number: 5 (lower is better)
Translates to: LLRIPSFEAKCAHTI*KAQVHLSWLHHATQ
Trigger: TTGAGTTGCGTGATGGAGCCAACTCAAATGCACCTGTGCTTTCCAAATTGTGTGGGCACACTTTGCCTCGAAACTGGGTATCCTCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GTCTCTAACATTCCTTCCCAGACCTTCACAAAGCTGTTCCGACACTaGCTGTCACTGCTGGGGATTCGGAAATTGCTGTCAAAGCTAATC +
Preference number: 5 (lower is better)
Translates to: VSNIPSQTFTKLFRH*LSLLGIRKLLSKLI
Trigger: GATTAGCTTTGACAGCAATTTCCGAATCCCCAGCAGTGACAGCCAGTGTCGGAACAGCTTTGTGAAGGTCTGGGAAGGAATGTTAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp CATACTTGCAGCTTGCATGATATTCCACATCAAAGTCATGGATGGTaGGCTGAATGCTATTCCCTGGGGCCACGCGAATGTTCCAGATAC +
Preference number: 5 (lower is better)
Translates to: HTCSLHDIPHQSHGW*AECYSLGPRECSRY
Trigger: GTATCTGGAACATTCGCGTGGCCCCAGGGAATAGCATTCAGCTCACCATCCATGACTTTGATGTGGAATATCATGCAAGCTGCAAGTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp TTTGATGATATGCAAGCCATCGTAATCGCAGGTTCCCGAGACAGCTaGGCGATCTTCCAAATGAAAGGACACAAACGTCAGGATGACCAG +
Preference number: 5 (lower is better)
Translates to: FDDMQAIVIAGSRDS*AIFQMKGHKRQDDQ
Trigger: CTGGTCATCCTGACGTTTGTGTCCTTTCATTTGGAAGATCGCTCAGCTGTCTCGGGAACCTGCGATTACGATGGCTTGCATATCATCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GTAAGAAACACTAAGTTTCCCTCCTCCGTAGTCATCCGAGGCTGGTaGAGATCAGCAATTCTTTTCTGTAGCTTCTGCTCTGGTGTTCCA +
Preference number: 5 (lower is better)
Translates to: VRNTKFPSSVVIRGW*RSAILFCSFCSGVP
Trigger: TGGAACACCAGAGCAGAAGCTACAGAAAAGAATTGCTGATCTCCACCAGCCTCGGATGACTACGGAGGAGGGAAACTTAGTGTTTCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp AGAATGGAAATGAATTCTTGCTGCGGGACCTGTAGTCTGGAGTGGTaGGGTAGACAGAGAAGTACAGAATTTCCCAAGAATGGGGTCATG +
Preference number: 5 (lower is better)
Translates to: RMEMNSCCGTCSLEW*GRQRSTEFPKNGVM
Trigger: CATGACCCCATTCTTGGGAAATTCTGTACTTCTCTGTCTACCCCACCACTCCAGACTACAGGTCCCGCAGCAAGAATTCATTTCCATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp TGTATGGAACACTACAATAAGTTTGGAACCTGTTGTAGCTCCTGGTaGGGGGATATTTTCTCCACAGTAGCGTCCTATCCGTTGTGGTCC +
Preference number: 5 (lower is better)
Translates to: CMEHYNKFGTCCSSW*GDIFSTVASYPLWS
Trigger: GGACCACAACGGATAGGACGCTACTGTGGAGAAAATATCCCCCCACCAGGAGCTACAACAGGTTCCAAACTTATTGTAGTGTTCCATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CCGTGTAGAAGGTTCCACCACAAGCTGATGTTGATGCAGAGTAGATaGCATGGAAACCGTCAAAACCGTACACAGAATCAGAGACAAACC +
Preference number: 5 (lower is better)
Translates to: PCRRFHHKLMLMQSR*HGNRQNRTQNQRQT
Trigger: GGTTTGTCTCTGATTCTGTGTACGGTTTTGACGGTTTCCATGCCATCTACTCTGCATCAACATCAGCTTGTGGTGGAACCTTCTACACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GCTTGCACCATCTGCTATCTGCACGTAATCAAAGGTGCATTTTCCTaGCGACGATGGTTCCTCCAGAGTAAATGCATTGAAGGTGAGCTT +
Preference number: 5 (lower is better)
Translates to: ACTICYLHVIKGAFS*RRWFLQSKCIEGEL
Trigger: AAGCTCACCTTCAATGCATTTACTCTGGAGGAACCATCGTCGCCAGGAAAATGCACCTTTGATTACGTGCAGATAGCAGATGGTGCAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp TCGTGGGCAAGAGCAGAGTCAGACACGAATATCAGCTTTATTGAATaGGAGCTGCTGGTAAGAGAAGGCGGGATGGATTTTCCACAGTAT +
Preference number: 5 (lower is better)
Translates to: SWARAESDTNISFIE*ELLVREGGMDFPQY
Trigger: ATACTGTGGAAAATCCATCCCGCCTTCTCTTACCAGCAGCTCTCATTCAATAAAGCTGATATTCGTGTCTGACTCTGCTCTTGCCCACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GCCAAATATATTTTTGAATCTGGCCTGGAAGCCCATTCCAGTGCCTaGGCCATCAGAGACAAATCTGACCCACAGATTATGTCCCTCGAT +
Preference number: 5 (lower is better)
Translates to: AKYIFESGLEAHSSA*AIRDKSDPQIMSLD
Trigger: ATCGAGGGACATAATCTGTGGGTCAGATTTGTCTCTGATGGCTCAGGCACTGGAATGGGCTTCCAGGCCAGATTCAAAAATATATTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CTTGTAAGAAACACTAAGTTTCCCTCCTCCGTAGTCATCCGAGGCTaGTGGAGATCAGCAATTCTTTTCTGTAGCTTCTGCTCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: LVRNTKFPSSVVIRG*WRSAILFCSFCSGV
Trigger: AACACCAGAGCAGAAGCTACAGAAAAGAATTGCTGATCTCCACCAGCCTCGGATGACTACGGAGGAGGGAAACTTAGTGTTTCTTACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp TTCGTTGATATCCTGGCATTGGTAACCATTTCCTTGCCAACCTTTTaGGCAGGCGCCACAGTAGAAGGAACCTTGTGTATTGAAACACTG +
Preference number: 5 (lower is better)
Translates to: FVDILALVTISLPTF*AGATVEGTLCIETL
Trigger: CAGTGTTTCAATACACAAGGTTCCTTCTACTGTGGCGCCTGCCCAAAAGGTTGGCAAGGAAATGGTTACCAATGCCAGGATATCAACGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp ACTTCCAATCTGAAAGTCGGTGAAGTTAAGAAGAACAACTTCTCTTaGGGGTTGGGAGATGGTCCACCTACAGGTTCTTCGTCCAGCATA +
Preference number: 5 (lower is better)
Translates to: TSNLKVGEVKKNNFS*GLGDGPPTGSSSSI
Trigger: TATGCTGGACGAAGAACCTGTAGGTGGACCATCTCCCAACCCCCAAGAGAAGTTGTTCTTCTTAACTTCACCGACTTTCAGATTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GAGTCACCATTCCTGACAGTGACCGAGTCTGACGTGCAAGTTGGATaGTTCTCCACACTAAAGTCACTAAATGTGAGAGTGATGGTATGT +
Preference number: 5 (lower is better)
Translates to: ESPFLTVTESDVQVG*FSTLKSLNVRVMVC
Trigger: ACATACCATCACTCTCACATTTAGTGACTTTAGTGTGGAGAACCATCCAACTTGCACGTCAGACTCGGTCACTGTCAGGAATGGTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CTAATGAAGGATGCAGAGAAGCCCTGGGCTGGCATCTCCTCAGATTaGAAGACAGCAGTGAAAATGTTTCCTAATGTGACAATGGGACTT +
Preference number: 5 (lower is better)
Translates to: LMKDAEKPWAGISSD*KTAVKMFPNVTMGL
Trigger: AAGTCCCATTGTCACATTAGGAAACATTTTCACTGCTGTCTTCCAATCTGAGGAGATGCCAGCCCAGGGCTTCTCTGCATCCTTCATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CCCAAAGTCTGTGATATATGCGTCAGAATAGAAGTTGAGCATCACTaGGCCATCTATGGTGAGGGGACGCAAGGTTTCAGAACCACATAT +
Preference number: 5 (lower is better)
Translates to: PKVCDICVRIEVEHH*AIYGEGTQGFRTTY
Trigger: ATATGTGGTTCTGAAACCTTGCGTCCCCTCACCATAGATGGCCCAGTGATGCTCAACTTCTATTCTGACGCATATATCACAGACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp GGTCCTATTGTCTCCCGGAAAGATACTTTCCAACCTCTTGCTGTTTaGGAAGAATCTGTCTTGAATAGCAGGGTCAGGCTGTTATTGGTG +
Preference number: 5 (lower is better)
Translates to: GPIVSRKDTFQPLAV*EESVLNSRVRLLLV
Trigger: CACCAATAACAGCCTGACCCTGCTATTCAAGACAGATTCTTCTCAAACAGCAAGAGGTTGGAAAGTATCTTTCCGGGAGACAATAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp TTGGCCGCGTTGGACTACTATATGCCAGGTACAATTTACACCGCTTaGGTAGACATTTGGATGACCAGGACTTTCAATGATTCCAGTAGA +
Preference number: 5 (lower is better)
Translates to: LAALDYYMPGTIYTA*VDIWMTRTFNDSSR
Trigger: TCTACTGGAATCATTGAAAGTCCTGGTCATCCAAATGTCTACCCAAGCGGTGTAAATTGTACCTGGCATATAGTAGTCCAACGCGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CAGTGCATCTTAAATCCTTTCTCTCCAGAGTCAACCCCATCTGTATaGAACACTACAATAAGTTTGGAACCTGTTGTAGCTCCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: QCILNPFSPESTPSV*NTTISLEPVVAPGG
Trigger: CCCACCAGGAGCTACAACAGGTTCCAAACTTATTGTAGTGTTCCATACAGATGGGGTTGACTCTGGAGAGAAAGGATTTAAGATGCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp TCGATTTCCAATGCTGGGACCATCGAAAACCTCCAGGTAATCATGTaGGCAAAGGTTGGAGGGAACAATCTCAAAATCATTGAACCGAAG +
Preference number: 5 (lower is better)
Translates to: SISNAGTIENLQVIM*AKVGGNNLKIIEPK
Trigger: CTTCGGTTCAATGATTTTGAGATTGTTCCCTCCAACCTTTGCTCACATGATTACCTGGAGGTTTTCGATGGTCCCAGCATTGGAAATCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp TCTGTCTTAAATCGGATTGCTAGTTCATTATCAGTGCTGGAAATCTaGATGGGATTCGCCGATGGTGATCGAGAACACAACTGGGCTATT +
Preference number: 5 (lower is better)
Translates to: SVLNRIASSLSVLEI*MGFADGDREHNWAI
Trigger: AATAGCCCAGTTGTGTTCTCGATCACCATCGGCGAATCCCATGCAGATTTCCAGCACTGATAATGAACTAGCAATCCGATTTAAGACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp CGTTTCGAAGCCTCCATCTCTGATTTCTACAAAATCTACACACTTTaGCCCAAAATAGTCCTCCAAGGCAAAGTCCGTGAAATGCAATGC +
Preference number: 5 (lower is better)
Translates to: RFEASISDFYKIYTL*PKIVLQGKVREMQC
Trigger: GCATTGCATTTCACGGACTTTGCCTTGGAGGACTATTTTGGGCCAAAGTGTGTAGATTTTGTAGAAATCAGAGATGGAGGCTTCGAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTTGGAACCAGACTGTATaGGCCCAGGGACTGACTGTC +
Preference number: 5 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTWNQTV*AQGLTV
Trigger: GACAGTCAGTCCCTGGGCCAATACAGTCTGGTTCCA...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp ACAGAACAGCCAGCTGCTGGGATAATCTACTGTCTCCATCTTTTATaGTCAGCTTGTCATAGGAACAAGATAGCTGAGCTTCAATGTCCA +
Preference number: 5 (lower is better)
Translates to: TEQPAAGIIYCLHLL*SACHRNKIAELQCP
Trigger: TGGACATTGAAGCTCAGCTATCTTGTTCCTATGACAAGCTGATCATAAAAGATGGAGACAGTAGATTATCCCAGCAGCTGGCTGTTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp ATTCGGAAATTGCTGTCAAAGCTAATCTCCCAGTGTTTACTTTCATaGGTGACAGCTGTCCAGGAACATCTGCTGTTTTCTGGGAATGTC +
Preference number: 5 (lower is better)
Translates to: IRKLLSKLISQCLLS*VTAVQEHLLFSGNV
Trigger: GACATTCCCAGAAAACAGCAGATGTTCCTGGACAGCTGTCACTCATGAAAGTAAACACTGGGAGATTAGCTTTGACAGCAATTTCCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp CACATCAAATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTTaGTTGGATGGTCCAGTTACAACGTTGGTCTTTATCGTAGGGATT +
Preference number: 5 (lower is better)
Translates to: HIKFQKCVVHRVACC*LDGPVTTLVFIVGI
Trigger: AATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTGATGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp ATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTTGCTTGGATaGTCCAGTTACAACGTTGGTCTTTATCGTAGGGATTTGGGTAAT +
Preference number: 5 (lower is better)
Translates to: IPEMCSSPCCLLLLG*SSYNVGLYRRDLGN
Trigger: ATTACCCAAATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp TGTCCATCTGTAGTTGGAGTTAAGTGGGTAATTTCCAGGCCAGAATaGAGTTGCGATTTTCCCATGAGTTCCCACAATATTATCATTGCC +
Preference number: 5 (lower is better)
Translates to: CPSVVGVKWVISRPE*SCDFPMSSHNIIIA
Trigger: GGCAATGATAATATTGTGGGAACTCATGGGAAAATCGCAACTCCATTCTGGCCTGGAAATTACCCACTTAACTCCAACTACAGATGGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp ATCTGCTATCTGCACGTAATCAAAGGTGCATTTTCCTGGCGACGATaGTTCCTCCAGAGTAAATGCATTGAAGGTGAGCTTAACAAGTTT +
Preference number: 5 (lower is better)
Translates to: ICYLHVIKGAFSWRR*FLQSKCIEGELNKF
Trigger: AAACTTGTTAAGCTCACCTTCAATGCATTTACTCTGGAGGAACCATCGTCGCCAGGAAAATGCACCTTTGATTACGTGCAGATAGCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 90 bp AACATCTGCTGTTTTCTGGGAATGTCTGAGGCCAATGAGGAGATTTaGTTGTACCATTATCTGAGTGAAGTGTTCCACCACAACCTAAAG +
Preference number: 5 (lower is better)
Translates to: NICCFLGMSEANEEI*LYHYLSEVFHHNLK
Trigger: CTTTAGGTTGTGGTGGAACACTTCACTCAGATAATGGTACAATCAAATCTCCTCATTGGCCTCAGACATTCCCAGAAAACAGCAGATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GACTACTATATGCCAGGTACAATTTACACCGCTTGGGTAGACATTTaGATGACCAGGACTTTCAATGATTCCAGTAGATTCTGTGAGAAC +
Preference number: 5 (lower is better)
Translates to: DYYMPGTIYTAWVDI*MTRTFNDSSRFCEN
Trigger: GTTCTCACAGAATCTACTGGAATCATTGAAAGTCCTGGTCATCCAAATGTCTACCCAAGCGGTGTAAATTGTACCTGGCATATAGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp ATGAGAAGAATCCACATTTACTGTCCATCTGTAGTTGGAGTTAAGTaGGTAATTTCCAGGCCAGAATGGAGTTGCGATTTTCCCATGAGT +
Preference number: 5 (lower is better)
Translates to: MRRIHIYCPSVVGVK*VISRPEWSCDFPMS
Trigger: ACTCATGGGAAAATCGCAACTCCATTCTGGCCTGGAAATTACCCACTTAACTCCAACTACAGATGGACAGTAAATGTGGATTCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GTAGTAGTTACAGTTCATGTTGTTGTCATAGTGCTTTGGGAAGTTTaGAGAGACGATGTCACCTGTAGAGCTATTGAATGTACGTCCACA +
Preference number: 5 (lower is better)
Translates to: VVVTVHVVVIVLWEV*RDDVTCRAIECTST
Trigger: TGTGGACGTACATTCAATAGCTCTACAGGTGACATCGTCTCTCCAAACTTCCCAAAGCACTATGACAACAACATGAACTGTAACTACTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTTCTTTACTGCAGTCATaGTGGCTCTCCAGGCTCAAG +
Preference number: 5 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTSLLQS*WLSRLK
Trigger: CTTGAGCCTGGAGAGCCACAATGACTGCAGTAAAGA...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp GTTGGTCTTTATCGTAGGGATTTGGGTAATTTATGCTCTCCAAGATaGCAGAGGTTTTATTCACTATTACCACATTGTCACATGTCTGCC +
Preference number: 5 (lower is better)
Translates to: VGLYRRDLGNLCSPR*QRFYSLLPHCHMSA
Trigger: GGCAGACATGTGACAATGTGGTAATAGTGAATAAAACCTCTGGCATCTTGGAGAGCATAAATTACCCAAATCCCTACGATAAAGACCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp CGTAATTTTCCACATCAAATTCCAGAAATGTGTAGTTCACCGTGTTaGCTGTTGTTGCTTGGATGGTCCAGTTACAACGTTGGTCTTTAT +
Preference number: 5 (lower is better)
Translates to: RNFPHQIPEMCSSPC*LLLLGWSSYNVGLY
Trigger: ATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTGATGTGGAAAATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp TTCCAAATGAAAGGACACAAACGTCAGGATGACCAGAGACTGTGGTaGAACATCTATGTAGTAGTTACAGTTCATGTTGTTGTCATAGTG +
Preference number: 5 (lower is better)
Translates to: FQMKGHKRQDDQRLW*NIYVVVTVHVVVIV
Trigger: CACTATGACAACAACATGAACTGTAACTACTACATAGATGTTGCACCACAGTCTCTGGTCATCCTGACGTTTGTGTCCTTTCATTTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp TGCTTGGATGGTCCAGTTACAACGTTGGTCTTTATCGTAGGGATTTaGGTAATTTATGCTCTCCAAGATGCCAGAGGTTTTATTCACTAT +
Preference number: 5 (lower is better)
Translates to: CLDGPVTTLVFIVGI*VIYALQDARGFIHY
Trigger: ATAGTGAATAAAACCTCTGGCATCTTGGAGAGCATAAATTACCCAAATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp AGCGTCCTATCCGTTGTGGTCCATCATAGAGCTCTAAGTAATCTGTaGAGCAGTTTACGTAATTTTCCACATCAAATTCCAGAAATGTGT +
Preference number: 5 (lower is better)
Translates to: SVLSVVVHHRALSNL*SSLRNFPHQIPEMC
Trigger: ACACATTTCTGGAATTTGATGTGGAAAATTACGTAAACTGCTCCACAGATTACTTAGAGCTCTATGATGGACCACAACGGATAGGACGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp GCTTTGCAGATGAAAGTGAGTAAAGGAGAGAGCAATATGATTGAATaGAGGTTGAGCTTCAATTATCCAGGTACAGTTCTGGTTGTTTGG +
Preference number: 5 (lower is better)
Translates to: ALQMKVSKGESNMIE*RLSFNYPGTVLVVW
Trigger: CCAAACAACCAGAACTGTACCTGGATAATTGAAGCTCAACCTCCATTCAATCATATTGCTCTCTCCTTTACTCACTTTCATCTGCAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp TCTGTAGTTGGAGTTAAGTGGGTAATTTCCAGGCCAGAATGGAGTTaGGATTTTCCCATGAGTTCCCACAATATTATCATTGCCAAATAT +
Preference number: 5 (lower is better)
Translates to: SVVGVKWVISRPEWS*DFPMSSHNIIIAKY
Trigger: ATATTTGGCAATGATAATATTGTGGGAACTCATGGGAAAATCGCAACTCCATTCTGGCCTGGAAATTACCCACTTAACTCCAACTACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp ATCTTCCAAATGAAAGGACACAAACGTCAGGATGACCAGAGACTGTaGTGCAACATCTATGTAGTAGTTACAGTTCATGTTGTTGTCATA +
Preference number: 5 (lower is better)
Translates to: IFQMKGHKRQDDQRL*CNIYVVVTVHVVVI
Trigger: TATGACAACAACATGAACTGTAACTACTACATAGATGTTGCACCACAGTCTCTGGTCATCCTGACGTTTGTGTCCTTTCATTTGGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS-3UTR CAA 90 bp CCGTACTTTGACTTTTGTATAGTGGAAACCATACAGCTATTTGTATCACCAACTAATCCCCTTCCTGACTaGGAAGAGTCAGAAGAAAAC +
Preference number: 5 (lower is better)
Translates to: PYFDFCIVETIQLFVSPTNPLPD*EESEEN
Trigger: GTTTTCTTCTGACTCTTCCAAGTCAGGAAGGGGATT...AGTTGGTGATACAAATAGCTGTATGGTTTCCACTATACAAAAGTCAAAGTACGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 90 bp TCCAGTTACAACGTTGGTCTTTATCGTAGGGATTTGGGTAATTTATaGTCTCCAAGATGCCAGAGGTTTTATTCACTATTACCACATTGT +
Preference number: 5 (lower is better)
Translates to: SSYNVGLYRRDLGNL*SPRCQRFYSLLPHC
Trigger: ACAATGTGGTAATAGTGAATAAAACCTCTGGCATCTTGGAGAGCATAAATTACCCAAATCCCTACGATAAAGACCAACGTTGTAACTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 90 bp AACATCTATGTAGTAGTTACAGTTCATGTTGTTGTCATAGTGCTTTaGGAAGTTTGGAGAGACGATGTCACCTGTAGAGCTATTGAATGT +
Preference number: 5 (lower is better)
Translates to: NIYVVVTVHVVVIVL*EVWRDDVTCRAIEC
Trigger: ACATTCAATAGCTCTACAGGTGACATCGTCTCTCCAAACTTCCCAAAGCACTATGACAACAACATGAACTGTAACTACTACATAGATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CCAGGTGGAAGTCTTGGAATTCAAGCAGGAAAGGGCTaGCACGGCTGGCTTCCAGCCGCCAGTAGCATTCGG +
Preference number: 6 (lower is better)
Translates to: PGGSLGIQAGKG*HGWLPAASSIR
Trigger: CCGAATGCTACTGGCGGCTGGAAGCCAGCCGTGGCAGCCCTTTCCTGCTTGAATTCCAAGACTTCCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp ATTCGGGCTCTGGTAGGCAAAGGTTCCTTGTGTCCCTaGGAGGATCCCTCCACAAGCTGCCTGGGGAGTCTG +
Preference number: 6 (lower is better)
Translates to: IRALVGKGSLCP*EDPSTSCLGSL
Trigger: CAGACTCCCCAGGCAGCTTGTGGAGGGATCCTCTCAGGGACACAAGGAACCTTTGCCTACCAGAGCCCGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp AGTCTTGGAATTCAAGCAGGAAAGGGCTGCCACGGCTaGCTTCCAGCCGCCAGTAGCATTCGGAGCTGTGGT +
Preference number: 6 (lower is better)
Translates to: SLGIQAGKGCHG*LPAASSIRSCG
Trigger: ACCACAGCTCCGAATGCTACTGGCGGCTGGAAGCCAGCCGTGGCAGCCCTTTCCTGCTTGAATTCCAAGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CAGAGAGCAGTTGGGGTGGTGTTCCAGGTGGAAGTCTaGGAATTCAAGCAGGAAAGGGCTGCCACGGCTGGC +
Preference number: 6 (lower is better)
Translates to: QRAVGVVFQVEV*EFKQERAATAG
Trigger: GCCAGCCGTGGCAGCCCTTTCCTGCTTGAATTCCAAGACTTCCACCTGGAACACCACCCCAACTGCTCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp TGCTCTGAGAGAAGATGGGGTTGGGCAGCAGGTTGCTaGAGTACTTGCCAAGCAGTGGTGAACTGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: CSERRWGWAAGC*STCQAVVNCCC
Trigger: GCAGCAGCAGTTCACCACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp AGAGAGCAGTTGGGGTGGTGTTCCAGGTGGAAGTCTTaGAATTCAAGCAGGAAAGGGCTGCCACGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: REQLGWCSRWKS*NSSRKGLPRLA
Trigger: AGCCAGCCGTGGCAGCCCTTTCCTGCTTGAATTCCAAGACTTCCACCTGGAACACCACCCCAACTGCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GTCAGTAATGATGTGGGCTCCGCACTCTTGCCTGAATaGAGCTCGGAAGCCCCTGCTCTGGCTGGAAGATCC +
Preference number: 6 (lower is better)
Translates to: VSNDVGSALLPE*SSEAPALAGRS
Trigger: GGATCTTCCAGCCAGAGCAGGGGCTTCCGAGCTCAATTCAGGCAAGAGTGCGGAGCCCACATCATTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp TCAGTAATGATGTGGGCTCCGCACTCTTGCCTGAATTaGGCTCGGAAGCCCCTGCTCTGGCTGGAAGATCCA +
Preference number: 6 (lower is better)
Translates to: SVMMWAPHSCLN*ARKPLLWLEDP
Trigger: TGGATCTTCCAGCCAGAGCAGGGGCTTCCGAGCTCAATTCAGGCAAGAGTGCGGAGCCCACATCATTACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AGAAGATGGGGTTGGGCAGCAGGTTGCTGCAGTACTTaGCAAGCAGTGGTGAACTGCTGCTGCTGCCATTTC +
Preference number: 6 (lower is better)
Translates to: RRWGWAAGCCST*QAVVNCCCCHF
Trigger: GAAATGGCAGCAGCAGCAGTTCACCACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GAGGAACAGGTTGCATCTGGATGGCAGCCTCCATTATaGATCGAGCAGATGTCCAAGGGGGTGCACACTCTC +
Preference number: 6 (lower is better)
Translates to: EEQVASGWQPPL*IEQMSKGVHTL
Trigger: GAGAGTGTGCACCCCCTTGGACATCTGCTCGATCCATAATGGAGGCTGCCATCCAGATGCAACCTGTTCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GCTCGGAAGCCCCTGCTCTGGCTGGAAGATCCAGACTaGAATCTCACAAAGAGGCTGTTTCCTGAAGAGGTG +
Preference number: 6 (lower is better)
Translates to: ARKPLLWLEDPD*NLTKRLFPEEV
Trigger: CACCTCTTCAGGAAACAGCCTCTTTGTGAGATTCCAGTCTGGATCTTCCAGCCAGAGCAGGGGCTTCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CGTCCACAACGGCTAATGAAGGATGCAGAGAAGCCCTaGGCTGGCATCTCCTCAGATTGGAAGACAGCAGTG +
Preference number: 6 (lower is better)
Translates to: RPQRLMKDAEKP*AGISSDWKTAV
Trigger: CACTGCTGTCTTCCAATCTGAGGAGATGCCAGCCCAGGGCTTCTCTGCATCCTTCATTAGCCGTTGTGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GAGAAGATGGGGTTGGGCAGCAGGTTGCTGCAGTACTaGCCAAGCAGTGGTGAACTGCTGCTGCTGCCATTT +
Preference number: 6 (lower is better)
Translates to: EKMGLGSRLLQY*PSSGELLLLPF
Trigger: AAATGGCAGCAGCAGCAGTTCACCACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp TCTTTCGAAGCAGGCTCTCATGGTCTCCAACCTCGATaGAAGTGTGAGAACAGCCCCTCTGGCTCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: SFEAGSHGLQPR*KCENSPSGSPA
Trigger: AGCTGGAGAGCCAGAGGGGCTGTTCTCACACTTTCATCGAGGTTGGAGACCATGAGAGCCTGCTTCGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp GGTAGTTCTGGTCACAGCCACCTGGAGAGTCGATACTaGGAAAGGGAAACCCAACAGAGAGAGGCCTTCCAG +
Preference number: 6 (lower is better)
Translates to: GSSGHSHLESRY*ERETQQREAFQ
Trigger: CTGGAAGGCCTCTCTCTGTTGGGTTTCCCTTTCTCAGTATCGACTCTCCAGGTGGCTGTGACCAGAACTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp ATTCTCCAGTTGAGCGGATGGGTCCGGGAACACTTCTaGCACACAGAACAGCCAGCTGCTGGGATAATCTAC +
Preference number: 6 (lower is better)
Translates to: ILQLSGWVREHF*HTEQPAAGIIY
Trigger: GTAGATTATCCCAGCAGCTGGCTGTTCTGTGTGGCAGAAGTGTTCCCGGACCCATCCGCTCAACTGGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GATGGGATGGGGCAGAGAGGTACCACAGTAACGGCCTaGGACAGGTGCATCAGAGTCTCTGCCATCCAAAAT +
Preference number: 6 (lower is better)
Translates to: DGMGQRGTTVTA*DRCIRVSAIQN
Trigger: ATTTTGGATGGCAGAGACTCTGATGCACCTGTCCAAGGCCGTTACTGTGGTACCTCTCTGCCCCATCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp TCCAGGGGAGTCACCATTCCTGACAGTGACCGAGTCTaGCGTGCAAGTTGGATGGTTCTCCACACTAAAGTC +
Preference number: 6 (lower is better)
Translates to: SRGVTIPDSDRV*RASWMVLHTKV
Trigger: GACTTTAGTGTGGAGAACCATCCAACTTGCACGTCAGACTCGGTCACTGTCAGGAATGGTGACTCCCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp TCATCGCTGTGGAAGTGCAGATACAGTTCATTGCTCTaGGAGAAGATGGGGTTGGGCAGCAGGTTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SSLWKCRYSSLL*EKMGLGSRLLQ
Trigger: CTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCAATGAACTGTATCTGCACTTCCACAGCGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GTGAAGGCTGGAGGCTGCATTCATCTTTGTCCTCTGTaGAGGAGATACCATTTGGCAGTGTTGTCCACCCAG +
Preference number: 6 (lower is better)
Translates to: VKAGGCIHLCPL*RRYHLAVLSTQ
Trigger: CTGGGTGGACAACACTGCCAAATGGTATCTCCTGCACAGAGGACAAAGATGAATGCAGCCTCCAGCCTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AGGCTGTTTCCTGAAGAGGTGATGGAATTAGGTGGCTaGTGTCTTCCACACACAGTGGCGACACGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: RLFPEEVMELGG*CLPHTVATRVF
Trigger: AAACACCCGTGTCGCCACTGTGTGTGGAAGACAGCAGCCACCTAATTCCATCACCTCTTCAGGAAACAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CTCTTGCTGTCCTCAGTCAGGTACCCACCACACCCTTaGTGTGGTCCTATTGTCTCCCGGAAAGATACTTTC +
Preference number: 6 (lower is better)
Translates to: LLLSSVRYPPHP*CGPIVSRKDTF
Trigger: GAAAGTATCTTTCCGGGAGACAATAGGACCACAGCAAGGGTGTGGTGGGTACCTGACTGAGGACAGCAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GTCCATCTGAGTCATGATCAGGAGACACAAAGCTCTTaGTGTCCTCAGTCAGGTACCCACCACACCCTTGCT +
Preference number: 6 (lower is better)
Translates to: VHLSHDQETQSS*CPQSGTHHTLA
Trigger: AGCAAGGGTGTGGTGGGTACCTGACTGAGGACAGCAAGAGCTTTGTGTCTCCTGATCATGACTCAGATGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CTGAGTCATCGCTGTGGAAGTGCAGATACAGTTCATTaGTCTGAGAGAAGATGGGGTTGGGCAGCAGGTTGC +
Preference number: 6 (lower is better)
Translates to: LSHRCGSADTVH*SERRWGWAAGC
Trigger: GCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCAATGAACTGTATCTGCACTTCCACAGCGATGACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GCAGATACAGTTCATTGCTCTGAGAGAAGATGGGGTTaGGCAGCAGGTTGCTGCAGTACTTGCCAAGCAGTG +
Preference number: 6 (lower is better)
Translates to: ADTVHCSERRWG*AAGCCSTCQAV
Trigger: CACTGCTTGGCAAGTACTGCAGCAACCTGCTGCCCAACCCCATCTTCTCTCAGAGCAATGAACTGTATCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GCTCTTGCTGTCCTCAGTCAGGTACCCACCACACCCTaGCTGTGGTCCTATTGTCTCCCGGAAAGATACTTT +
Preference number: 6 (lower is better)
Translates to: ALAVLSQVPTTP*LWSYCLPERYF
Trigger: AAAGTATCTTTCCGGGAGACAATAGGACCACAGCAAGGGTGTGGTGGGTACCTGACTGAGGACAGCAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CTGTCAGGAAAGCCAGGGTTGGCTAATATACCTTCGTaGCCCAAAAGAGTCCCTCCACAGCCAGTAGGAGAG +
Preference number: 6 (lower is better)
Translates to: LSGKPGLANIPS*PKRVPPQPVGE
Trigger: CTCTCCTACTGGCTGTGGAGGGACTCTTTTGGGCAACGAAGGTATATTAGCCAACCCTGGCTTTCCTGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp GGACTTGGAGCCACATTCCCACAGCTTGTGGCTAACAGGGCATCGTaGGTCTCTAACATTCCTTCCCAGACCTTCACAAAGCTGTTCCGA +
Preference number: 6 (lower is better)
Translates to: GLGATFPQLVANRAS*VSNIPSQTFTKLFR
Trigger: TCGGAACAGCTTTGTGAAGGTCTGGGAAGGAATGTTAGAGACCAACGATGCCCTGTTAGCCACAAGCTGTGGGAATGTGGCTCCAAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp AGACAAACCTCACTGTCAGGGCATTGCCAAATGATATaGTGGGATGGGGCAGAGAGGTACCACAGTAACGGC +
Preference number: 6 (lower is better)
Translates to: RQTSLSGHCQMI*WDGAERYHSNG
Trigger: GCCGTTACTGTGGTACCTCTCTGCCCCATCCCATCATATCATTTGGCAATGCCCTGACAGTGAGGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp CACAGTGTCGATGCCACAGAACGGTCCAAAGGGTGGTaGGTTGGCATCTGGACCATTGAAGAGTATGAGGTA +
Preference number: 6 (lower is better)
Translates to: HSVDATERSKGW*VGIWTIEEYEV
Trigger: TACCTCATACTCTTCAATGGTCCAGATGCCAACTCACCACCCTTTGGACCGTTCTGTGGCATCGACACTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GGGCGTGGAGCCACAGTATCTACCAAGTGGGAAATCTaGAGAGGAGTCTCCATCATGAATCTGAAGGTACTC +
Preference number: 6 (lower is better)
Translates to: GRGATVSTKWEI*RGVSIMNLKVL
Trigger: GAGTACCTTCAGATTCATGATGGAGACTCCTCTGCAGATTTCCCACTTGGTAGATACTGTGGCTCCACGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GTCACTAGTCTCGGAGTCAGAATGGAAATGAATTCTTaGTGCGGGACCTGTAGTCTGGAGTGGTGGGGTAGA +
Preference number: 6 (lower is better)
Translates to: VTSLGVRMEMNS*CGTCSLEWWGR
Trigger: TCTACCCCACCACTCCAGACTACAGGTCCCGCAGCAAGAATTCATTTCCATTCTGACTCCGAGACTAGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp AAGGAGTCGTGCAGGTTGACACAGGTGCCACCATTGTaGCAGGGATTGCTACTGCAAACTTTTCTCTCCACA +
Preference number: 6 (lower is better)
Translates to: KESCRLTQVPPL*QGLLLQTFLST
Trigger: TGTGGAGAGAAAAGTTTGCAGTAGCAATCCCTGCCACAATGGTGGCACCTGTGTCAACCTGCACGACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CCTAGAACAGAAGAGGAGGAACAGGTTGCATCTGGATaGCAGCCTCCATTATGGATCGAGCAGATGTCCAAG +
Preference number: 6 (lower is better)
Translates to: PRTEEEEQVASG*QPPLWIEQMSK
Trigger: CTTGGACATCTGCTCGATCCATAATGGAGGCTGCCATCCAGATGCAACCTGTTCCTCCTCTTCTGTTCTAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GGCCATCAAACACGGCCAAGTAATCCAGAGAGCAGTTaGGGTGGTGTTCCAGGTGGAAGTCTTGGAATTCAA +
Preference number: 6 (lower is better)
Translates to: GHQTRPSNPESS*GGVPGGSLGIQ
Trigger: TTGAATTCCAAGACTTCCACCTGGAACACCACCCCAACTGCTCTCTGGATTACTTGGCCGTGTTTGATGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CCACATTCCCACAGCTTGTGGCTAACAGGGCATCGTTaGTCTCTAACATTCCTTCCCAGACCTTCACAAAGC +
Preference number: 6 (lower is better)
Translates to: PHSHSLWLTGHR*SLTFLPRPSQS
Trigger: GCTTTGTGAAGGTCTGGGAAGGAATGTTAGAGACCAACGATGCCCTGTTAGCCACAAGCTGTGGGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CCAGTAGGAGAGGAGGCCCAGATAATTTCATATCCATaGTGGGTGTCTGAGTCATCGCTGTGGAAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: PVGEEAQIISYP*WVSESSLWKCR
Trigger: TCTGCACTTCCACAGCGATGACTCAGACACCCACCATGGATATGAAATTATCTGGGCCTCCTCTCCTACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GTCGGTGAAGTTAAGAAGAACAACTTCTCTTGGGGGTaGGGAGATGGTCCACCTACAGGTTCTTCGTCCAGC +
Preference number: 6 (lower is better)
Translates to: VGEVKKNNFSWG*GDGPPTGSSSS
Trigger: GCTGGACGAAGAACCTGTAGGTGGACCATCTCCCAACCCCCAAGAGAAGTTGTTCTTCTTAACTTCACCGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CCACCGCAACCTCCAGGGACTGCTCGCCATGAGGCATaGAAACCTCTTCCATTTAAAGAGCTGTCTGTCTTA +
Preference number: 6 (lower is better)
Translates to: PPQPPGTARHEA*KPLPFKELSVL
Trigger: TAAGACAGACAGCTCTTTAAATGGAAGAGGTTTCAATGCCTCATGGCGAGCAGTCCCTGGAGGTTGCGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp ATCAGTGCTGGAAATCTGCATGGGATTCGCCGATGGTaGTCGAGAACACAACTGGGCTATTCTTGGAGAGTG +
Preference number: 6 (lower is better)
Translates to: ISAGNLHGIRRW*SRTQLGYSWRV
Trigger: CACTCTCCAAGAATAGCCCAGTTGTGTTCTCGATCACCATCGGCGAATCCCATGCAGATTTCCAGCACTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp ATAGTTGGCTGGGTACAGTGGAGAGGAGATGCTATCTaGAGAGTCAGTAATGATGTGGGCTCCGCACTCTTG +
Preference number: 6 (lower is better)
Translates to: IVGWVQWRGDAI*RVSNDVGSALL
Trigger: CAAGAGTGCGGAGCCCACATCATTACTGACTCTTCAGATAGCATCTCCTCTCCACTGTACCCAGCCAACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CTGCTGAGAGCCCTGTTCACAGTCATTATATTTGGATaGACACTGAGGTCCATACGTATCAGGCGTGCAGTC +
Preference number: 6 (lower is better)
Translates to: LLRALFTVIIFG*TLRSIRIRRAV
Trigger: GACTGCACGCCTGATACGTATGGACCTCAGTGTGCATCCAAATATAATGACTGTGAACAGGGCTCTCAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CCAGACATCTCTCCACCACAGCCATGGATGAACCAGTaGATCTTAAATCCTTTCTCTCCAGAGTCAACCCCA +
Preference number: 6 (lower is better)
Translates to: PDISPPQPWMNQ*ILNPFSPESTP
Trigger: TGGGGTTGACTCTGGAGAGAAAGGATTTAAGATGCACTGGTTCATCCATGGCTGTGGTGGAGAGATGTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GGGCAGAGAGGTACCACAGTAACGGCCTTGGACAGGTaGATCAGAGTCTCTGCCATCCAAAATTTCTACAAA +
Preference number: 6 (lower is better)
Translates to: GQRGTTVTALDR*IRVSAIQNFYK
Trigger: TTTGTAGAAATTTTGGATGGCAGAGACTCTGATGCACCTGTCCAAGGCCGTTACTGTGGTACCTCTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp TCGGTGAAGTTAAGAAGAACAACTTCTCTTGGGGGTTaGGAGATGGTCCACCTACAGGTTCTTCGTCCAGCA +
Preference number: 6 (lower is better)
Translates to: SVKLRRTTSLGG*EMVHLQVLRPA
Trigger: TGCTGGACGAAGAACCTGTAGGTGGACCATCTCCCAACCCCCAAGAGAAGTTGTTCTTCTTAACTTCACCGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GGGAGTTTCCACAGTATCGTCCCATCAAGTGGCCCGTaGCATTTCCTTCTCGGATTTCCACAAAATCCTTGT +
Preference number: 6 (lower is better)
Translates to: GSFHSIVPSSGP*HFLLGFPQNPC
Trigger: ACAAGGATTTTGTGGAAATCCGAGAAGGAAATGCCACGGGCCACTTGATGGGACGATACTGTGGAAACTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CCGGGAACACTTCTGCCACACAGAACAGCCAGCTGCTaGGATAATCTACTGTCTCCATCTTTTATGATCAGC +
Preference number: 6 (lower is better)
Translates to: PGTLLPHRTASC*DNLLSPSFMIS
Trigger: GCTGATCATAAAAGATGGAGACAGTAGATTATCCCAGCAGCTGGCTGTTCTGTGTGGCAGAAGTGTTCCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ACAACGGCTAATGAAGGATGCAGAGAAGCCCTGGGCTaGCATCTCCTCAGATTGGAAGACAGCAGTGAAAAT +
Preference number: 6 (lower is better)
Translates to: TTANEGCREALG*HLLRLEDSSEN
Trigger: ATTTTCACTGCTGTCTTCCAATCTGAGGAGATGCCAGCCCAGGGCTTCTCTGCATCCTTCATTAGCCGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GTAGGAGAGGAGGCCCAGATAATTTCATATCCATGGTaGGTGTCTGAGTCATCGCTGTGGAAGTGCAGATAC +
Preference number: 6 (lower is better)
Translates to: VGEEAQIISYPW*VSESSLWKCRY
Trigger: GTATCTGCACTTCCACAGCGATGACTCAGACACCCACCATGGATATGAAATTATCTGGGCCTCCTCTCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GAGTGTTGTTTGGGTAGCTGTCAGGAAAGCCAGGGTTaGCTAATATACCTTCGTTGCCCAAAAGAGTCCCTC +
Preference number: 6 (lower is better)
Translates to: ECCLGSCQESQG*LIYLRCPKESL
Trigger: GAGGGACTCTTTTGGGCAACGAAGGTATATTAGCCAACCCTGGCTTTCCTGACAGCTACCCAAACAACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CATCGCCCGTGTAGAAGGTTCCACCACAAGCTGATGTaGATGCAGAGTAGATGGCATGGAAACCGTCAAAAC +
Preference number: 6 (lower is better)
Translates to: HRPCRRFHHKLM*MQSRWHGNRQN
Trigger: GTTTTGACGGTTTCCATGCCATCTACTCTGCATCAACATCAGCTTGTGGTGGAACCTTCTACACGGGCGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp AGCTTGCATGATATTCCACATCAAAGTCATGGATGGTaGGCTGAATGCTATTCCCTGGGGCCACGCGAATGT +
Preference number: 6 (lower is better)
Translates to: SLHDIPHQSHGW*AECYSLGPREC
Trigger: ACATTCGCGTGGCCCCAGGGAATAGCATTCAGCTCACCATCCATGACTTTGATGTGGAATATCATGCAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp ACTGTGCATGTTCTGAACAAGGTGAAGGCTGGAGGCTaGATTCATCTTTGTCCTCTGTGCAGGAGATACCAT +
Preference number: 6 (lower is better)
Translates to: TVHVLNKVKAGG*IHLCPLCRRYH
Trigger: ATGGTATCTCCTGCACAGAGGACAAAGATGAATGCAGCCTCCAGCCTTCACCTTGTTCAGAACATGCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CACAGTAACGGCCTTGGACAGGTGCATCAGAGTCTCTaGCATCCAAAATTTCTACAAAGTCCCGTGTGCAAT +
Preference number: 6 (lower is better)
Translates to: HSNGLGQVHQSL*HPKFLQSPVCN
Trigger: ATTGCACACGGGACTTTGTAGAAATTTTGGATGGCAGAGACTCTGATGCACCTGTCCAAGGCCGTTACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ACTAAGTTTCCCTCCTCCGTAGTCATCCGAGGCTGGTaGAGATCAGCAATTCTTTTCTGTAGCTTCTGCTCT +
Preference number: 6 (lower is better)
Translates to: TKFPSSVVIRGW*RSAILFCSFCS
Trigger: AGAGCAGAAGCTACAGAAAAGAATTGCTGATCTCCACCAGCCTCGGATGACTACGGAGGAGGGAAACTTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp AACACTAAGTTTCCCTCCTCCGTAGTCATCCGAGGCTaGTGGAGATCAGCAATTCTTTTCTGTAGCTTCTGC +
Preference number: 6 (lower is better)
Translates to: NTKFPSSVVIRG*WRSAILFCSFC
Trigger: GCAGAAGCTACAGAAAAGAATTGCTGATCTCCACCAGCCTCGGATGACTACGGAGGAGGGAAACTTAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATCCTGGCATTGGTAACCATTTCCTTGCCAACCTTTTaGGCAGGCGCCACAGTAGAAGGAACCTTGTGTATT +
Preference number: 6 (lower is better)
Translates to: ILALVTISLPTF*AGATVEGTLCI
Trigger: AATACACAAGGTTCCTTCTACTGTGGCGCCTGCCCAAAAGGTTGGCAAGGAAATGGTTACCAATGCCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CTGAAAGTCGGTGAAGTTAAGAAGAACAACTTCTCTTaGGGGTTGGGAGATGGTCCACCTACAGGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: LKVGEVKKNNFS*GLGDGPPTGSS
Trigger: CGAAGAACCTGTAGGTGGACCATCTCCCAACCCCCAAGAGAAGTTGTTCTTCTTAACTTCACCGACTTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GTGTCACTCTTAAACCTTAGCCATAGCTTGTTACTGTaGGAGATGATTCTGGGAGGGAAAACTGAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: VSLLNLSHSLLL*EMILGGKTEPQ
Trigger: CTGCGGCTCAGTTTTCCCTCCCAGAATCATCTCCCACAGTAACAAGCTATGGCTAAGGTTTAAGAGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CACTACAATAAGTTTGGAACCTGTTGTAGCTCCTGGTaGGGGGATATTTTCTCCACAGTAGCGTCCTATCCG +
Preference number: 6 (lower is better)
Translates to: HYNKFGTCCSSW*GDIFSTVASYP
Trigger: CGGATAGGACGCTACTGTGGAGAAAATATCCCCCCACCAGGAGCTACAACAGGTTCCAAACTTATTGTAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GTTCCAGACACATTCTGTATTAGAATGGTAGTCTTCTaGGTAGCCAGGGCTATTGAAGATGCCATCGCCCGT +
Preference number: 6 (lower is better)
Translates to: VPDTFCIRMVVF*VARAIEDAIAR
Trigger: ACGGGCGATGGCATCTTCAATAGCCCTGGCTACCCAGAAGACTACCATTCTAATACAGAATGTGTCTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATACCCAGTTTCGAGGCAAAGTGTGCCCACACAATTTaGAAAGCACAGGTGCATTTGAGTTGGCTCCATCAC +
Preference number: 6 (lower is better)
Translates to: IPSFEAKCAHTI*KAQVHLSWLHH
Trigger: GTGATGGAGCCAACTCAAATGCACCTGTGCTTTCCAAATTGTGTGGGCACACTTTGCCTCGAAACTGGGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TATCCTGGCATTGGTAACCATTTCCTTGCCAACCTTTaGGGCAGGCGCCACAGTAGAAGGAACCTTGTGTAT +
Preference number: 6 (lower is better)
Translates to: YPGIGNHFLANL*GRRHSRRNLVY
Trigger: ATACACAAGGTTCCTTCTACTGTGGCGCCTGCCCAAAAGGTTGGCAAGGAAATGGTTACCAATGCCAGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CTCCAAGGCAAAGTCCGTGAAATGCAATGCAATCTGTaGGTTGAGTCCCACAGTGATCCTGTAGACGCAGTT +
Preference number: 6 (lower is better)
Translates to: LQGKVREMQCNL*VESHSDPVDAV
Trigger: AACTGCGTCTACAGGATCACTGTGGGACTCAACCAACAGATTGCATTGCATTTCACGGACTTTGCCTTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp TGGAAAATCCCACCGCAACCTCCAGGGACTGCTCGCCATGAGGCATaGAAACCTCTTCCATTTAAAGAGCTGTCTGTCTTAAATCGGATT +
Preference number: 6 (lower is better)
Translates to: WKIPPQPPGTARHEA*KPLPFKELSVLNRI
Trigger: AATCCGATTTAAGACAGACAGCTCTTTAAATGGAAGAGGTTTCAATGCCTCATGGCGAGCAGTCCCTGGAGGTTGCGGTGGGATTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp ATTTTTGAATCTGGCCTGGAAGCCCATTCCAGTGCCTaGGCCATCAGAGACAAATCTGACCCACAGATTATG +
Preference number: 6 (lower is better)
Translates to: IFESGLEAHSSA*AIRDKSDPQIM
Trigger: CATAATCTGTGGGTCAGATTTGTCTCTGATGGCTCAGGCACTGGAATGGGCTTCCAGGCCAGATTCAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp GTCTCCCGGAAAGATACTTTCCAACCTCTTGCTGTTTaGGAAGAATCTGTCTTGAATAGCAGGGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: VSRKDTFQPLAV*EESVLNSRVRL
Trigger: CAGCCTGACCCTGCTATTCAAGACAGATTCTTCTCAAACAGCAAGAGGTTGGAAAGTATCTTTCCGGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATGAATTCTTGCTGCGGGACCTGTAGTCTGGAGTGGTaGGGTAGACAGAGAAGTACAGAATTTCCCAAGAAT +
Preference number: 6 (lower is better)
Translates to: MNSCCGTCSLEW*GRQRSTEFPKN
Trigger: ATTCTTGGGAAATTCTGTACTTCTCTGTCTACCCCACCACTCCAGACTACAGGTCCCGCAGCAAGAATTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GTGTATCCCCACATAGTTTATTTATCAGACGGGAGTTaGTACTCGGGCCATCAAACACGGCCAAGTAATCCA +
Preference number: 6 (lower is better)
Translates to: VYPHIVYLSDGS*YSGHQTRPSNP
Trigger: TGGATTACTTGGCCGTGTTTGATGGCCCGAGTACCAACTCCCGTCTGATAAATAAACTATGTGGGGATACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp TTCCTGACAGTGACCGAGTCTGACGTGCAAGTTGGATaGTTCTCCACACTAAAGTCACTAAATGTGAGAGTG +
Preference number: 6 (lower is better)
Translates to: FLTVTESDVQVG*FSTLKSLNVRV
Trigger: CACTCTCACATTTAGTGACTTTAGTGTGGAGAACCATCCAACTTGCACGTCAGACTCGGTCACTGTCAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp TGTGATATATGCGTCAGAATAGAAGTTGAGCATCACTaGGCCATCTATGGTGAGGGGACGCAAGGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: CDICVRIEVEHH*AIYGEGTQGFR
Trigger: TCTGAAACCTTGCGTCCCCTCACCATAGATGGCCCAGTGATGCTCAACTTCTATTCTGACGCATATATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CTGCACGTAATCAAAGGTGCATTTTCCTGGCGACGATaGTTCCTCCAGAGTAAATGCATTGAAGGTGAGCTT +
Preference number: 6 (lower is better)
Translates to: LHVIKGAFSWRR*FLQSKCIEGEL
Trigger: AAGCTCACCTTCAATGCATTTACTCTGGAGGAACCATCGTCGCCAGGAAAATGCACCTTTGATTACGTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATTGAAGAGTATGAGGTAGTTCTGGTCACAGCCACCTaGAGAGTCGATACTGAGAAAGGGAAACCCAACAGA +
Preference number: 6 (lower is better)
Translates to: IEEYEVVLVTAT*RVDTEKGKPNR
Trigger: TCTGTTGGGTTTCCCTTTCTCAGTATCGACTCTCCAGGTGGCTGTGACCAGAACTACCTCATACTCTTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TGCATTCATCTTTGTCCTCTGTGCAGGAGATACCATTaGGCAGTGTTGTCCACCCAGCATCACAGATACAGT +
Preference number: 6 (lower is better)
Translates to: CIHLCPLCRRYH*AVLSTQHHRYS
Trigger: ACTGTATCTGTGATGCTGGGTGGACAACACTGCCAAATGGTATCTCCTGCACAGAGGACAAAGATGAATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GTGAGTGCCGTGTCACTCTTAAACCTTAGCCATAGCTaGTTACTGTGGGAGATGATTCTGGGAGGGAAAACT +
Preference number: 6 (lower is better)
Translates to: VSAVSLLNLSHS*LLWEMILGGKT
Trigger: AGTTTTCCCTCCCAGAATCATCTCCCACAGTAACAAGCTATGGCTAAGGTTTAAGAGTGACACGGCACTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp ACATGTCTGCCGATAGTTGATCTCAAAGCCACGTCCTaGTTGACCTGCATCAGTCCTCAGCTTCAACAATAC +
Preference number: 6 (lower is better)
Translates to: TCLPIVDLKATS*LTCISPQLQQY
Trigger: GTATTGTTGAAGCTGAGGACTGATGCAGGTCAACAAGGACGTGGCTTTGAGATCAACTATCGGCAGACATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TACACAGAATCAGAGACAAACCTCACTGTCAGGGCATaGCCAAATGATATGATGGGATGGGGCAGAGAGGTA +
Preference number: 6 (lower is better)
Translates to: YTESETNLTVRA*PNDMMGWGREV
Trigger: TACCTCTCTGCCCCATCCCATCATATCATTTGGCAATGCCCTGACAGTGAGGTTTGTCTCTGATTCTGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TGTCAGAGAGTTTCTGCTGGAGCTAAAGGATTCTCTTaGGGTACCACAGTAAGTGCCAATCAGACGGGAATG +
Preference number: 6 (lower is better)
Translates to: CQRVSAGAKGFS*GTTVSANQTGM
Trigger: CATTCCCGTCTGATTGGCACTTACTGTGGTACCCAAAGAGAATCCTTTAGCTCCAGCAGAAACTCTCTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TTCCGACACTGGCTGTCACTGCTGGGGATTCGGAAATaGCTGTCAAAGCTAATCTCCCAGTGTTTACTTTCA +
Preference number: 6 (lower is better)
Translates to: FRHWLSLLGIRK*LSKLISQCLLS
Trigger: TGAAAGTAAACACTGGGAGATTAGCTTTGACAGCAATTTCCGAATCCCCAGCAGTGACAGCCAGTGTCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp AATCTGAAAGTCGGTGAAGTTAAGAAGAACAACTTCTCTTGGGGGTaGGGAGATGGTCCACCTACAGGTTCTTCGTCCAGCATATGCATT +
Preference number: 6 (lower is better)
Translates to: NLKVGEVKKNNFSWG*GDGPPTGSSSSICI
Trigger: AATGCATATGCTGGACGAAGAACCTGTAGGTGGACCATCTCCCAACCCCCAAGAGAAGTTGTTCTTCTTAACTTCACCGACTTTCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp GGTCCATCTGCTGTACAAGTTTGGATAGTTAGGACTTaGGATCACTCCATTCTCACCTGTCTGTATTCCACC +
Preference number: 6 (lower is better)
Translates to: GPSAVQVWIVRT*DHSILTCLYST
Trigger: GGTGGAATACAGACAGGTGAGAATGGAGTGATCTCAAGTCCTAACTATCCAAACTTGTACAGCAGATGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AATCGGATTGCTAGTTCATTATCAGTGCTGGAAATCTaGATGGGATTCGCCGATGGTGATCGAGAACACAAC +
Preference number: 6 (lower is better)
Translates to: NRIASSLSVLEI*MGFADGDREHN
Trigger: GTTGTGTTCTCGATCACCATCGGCGAATCCCATGCAGATTTCCAGCACTGATAATGAACTAGCAATCCGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp AAGGAGCTGAATACCAAACGAATCAGTTGGCCGCGTTaGACTACTATATGCCAGGTACAATTTACACCGCTT +
Preference number: 6 (lower is better)
Translates to: KELNTKRISWPR*TTICQVQFTPL
Trigger: AAGCGGTGTAAATTGTACCTGGCATATAGTAGTCCAACGCGGCCAACTGATTCGTTTGGTATTCAGCTCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATGTGTAGTTCACCGTGTTGCCTGTTGTTGCTTGGATaGTCCAGTTACAACGTTGGTCTTTATCGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: MCSSPCCLLLLG*SSYNVGLYRRD
Trigger: ATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CAATTATCCAGGTACAGTTCTGGTTGTTTGGATAGTTaGCTGGGTACAGTGGAGAGGAGATGCTATCTGAAG +
Preference number: 6 (lower is better)
Translates to: QLSRYSSGCLDS*LGTVERRCYLK
Trigger: CTTCAGATAGCATCTCCTCTCCACTGTACCCAGCCAACTATCCAAACAACCAGAACTGTACCTGGATAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp AAAGGAGCTGAATACCAAACGAATCAGTTGGCCGCGTaGGACTACTATATGCCAGGTACAATTTACACCGCT +
Preference number: 6 (lower is better)
Translates to: KGAEYQTNQLAA*DYYMPGTIYTA
Trigger: AGCGGTGTAAATTGTACCTGGCATATAGTAGTCCAACGCGGCCAACTGATTCGTTTGGTATTCAGCTCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TGTCTGCCGATAGTTGATCTCAAAGCCACGTCCTTGTaGACCTGCATCAGTCCTCAGCTTCAACAATACAAT +
Preference number: 6 (lower is better)
Translates to: CLPIVDLKATSL*TCISPQLQQYN
Trigger: ATTGTATTGTTGAAGCTGAGGACTGATGCAGGTCAACAAGGACGTGGCTTTGAGATCAACTATCGGCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TTTCCTGGCGACGATGGTTCCTCCAGAGTAAATGCATaGAAGGTGAGCTTAACAAGTTTGTTTTCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: FPGDDGSSRVNA*KVSLTSLFSGA
Trigger: TGCCCCTGAAAACAAACTTGTTAAGCTCACCTTCAATGCATTTACTCTGGAGGAACCATCGTCGCCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp GTAATGAAACTCCAGGTAAAAGGAGCTGAATACCAAACGAATCAGTaGGCCGCGTTGGACTACTATATGCCAGGTACAATTTACACCGCT +
Preference number: 6 (lower is better)
Translates to: VMKLQVKGAEYQTNQ*AALDYYMPGTIYTA
Trigger: AGCGGTGTAAATTGTACCTGGCATATAGTAGTCCAACGCGGCCAACTGATTCGTTTGGTATTCAGCTCCTTTTACCTGGAGTTTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp CACATTGTCACATGTCTGCCGATAGTTGATCTCAAAGCCACGTCCTaGTTGACCTGCATCAGTCCTCAGCTTCAACAATACAATGTCTTT +
Preference number: 6 (lower is better)
Translates to: HIVTCLPIVDLKATS*LTCISPQLQQYNVF
Trigger: AAAGACATTGTATTGTTGAAGCTGAGGACTGATGCAGGTCAACAAGGACGTGGCTTTGAGATCAACTATCGGCAGACATGTGACAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp GTTCACCGTGTTGCCTGTTGTTGCTTGGATGGTCCAGTTACAACGTaGGTCTTTATCGTAGGGATTTGGGTAATTTATGCTCTCCAAGAT +
Preference number: 6 (lower is better)
Translates to: VHRVACCCLDGPVTT*VFIVGIWVIYALQD
Trigger: ATCTTGGAGAGCATAAATTACCCAAATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp CCACATCAAATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTaGCTTGGATGGTCCAGTTACAACGTTGGTCTTTATCGTAGGGAT +
Preference number: 6 (lower is better)
Translates to: PHQIPEMCSSPCCLL*LGWSSYNVGLYRRD
Trigger: ATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AAAATAGTCCTCCAAGGCAAAGTCCGTGAAATGCAATaGAATCTGTTGGTTGAGTCCCACAGTGATCCTGTA +
Preference number: 6 (lower is better)
Translates to: KIVLQGKVREMQ*NLLVESHSDPV
Trigger: TACAGGATCACTGTGGGACTCAACCAACAGATTGCATTGCATTTCACGGACTTTGCCTTGGAGGACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CCGATAGTTGATCTCAAAGCCACGTCCTTGTTGACCTaGATCAGTCCTCAGCTTCAACAATACAATGTCTTT +
Preference number: 6 (lower is better)
Translates to: PIVDLKATSLLT*ISPQLQQYNVF
Trigger: AAAGACATTGTATTGTTGAAGCTGAGGACTGATGCAGGTCAACAAGGACGTGGCTTTGAGATCAACTATCGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp TTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTTaGTTGGATGGTCCAGTTACAACGTTGGTCTTTATC +
Preference number: 6 (lower is better)
Translates to: FQKCVVHRVACC*LDGPVTTLVFI
Trigger: GATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp CCACATCAAATTCCAGAAATGTGTAGTTCACCGTGTTaGCTGTTGTTGCTTGGATGGTCCAGTTACAACGTT +
Preference number: 6 (lower is better)
Translates to: PHQIPEMCSSPC*LLLLGWSSYNV
Trigger: AACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTGATGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GCATTTTCCTGGCGACGATGGTTCCTCCAGAGTAAATaGATTGAAGGTGAGCTTAACAAGTTTGTTTTCAGG +
Preference number: 6 (lower is better)
Translates to: AFSWRRWFLQSK*IEGELNKFVFR
Trigger: CCTGAAAACAAACTTGTTAAGCTCACCTTCAATGCATTTACTCTGGAGGAACCATCGTCGCCAGGAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp CAGGGTCAGGCTGTTATTGGTGCTCTTAATAACTTGTaGAAGTGTGGAACCACAGAACTTTCCAATAGATCG +
Preference number: 6 (lower is better)
Translates to: QGQAVIGALNNL*KCGTTELSNRS
Trigger: CGATCTATTGGAAAGTTCTGTGGTTCCACACTTCCACAAGTTATTAAGAGCACCAATAACAGCCTGACCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTTGCTaGGATGGTCCAGTTACAACGTTGGTCTTTATCGTA +
Preference number: 6 (lower is better)
Translates to: QKCVVHRVACCC*DGPVTTLVFIV
Trigger: TACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CAAATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTaGTTGCTTGGATGGTCCAGTTACAACGTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: QIPEMCSSPCCL*LLGWSSYNVGL
Trigger: AAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CCCGTGGCATTTCCTTCTCGGATTTCCACAAAATCCTaGTTACAGTTTAGAGAGTTCTCCAACTGGAAGGAT +
Preference number: 6 (lower is better)
Translates to: PVAFPSRISTKS*LQFREFSNWKD
Trigger: ATCCTTCCAGTTGGAGAACTCTCTAAACTGTAACAAGGATTTTGTGGAAATCCGAGAAGGAAATGCCACGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp ACAACTGAGGTGATGATGTGTTTTGAGGCATCGAAGTaGCATTATATGTTCCCCCACAAGGCATGTCCACAA +
Preference number: 6 (lower is better)
Translates to: TTEVMMCFEASK*HYMFPHKACPQ
Trigger: TTGTGGACATGCCTTGTGGGGGAACATATAATGCAACTTCGATGCCTCAAAACACATCATCACCTCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp TACAGTTCTGTCCAAACCAGCCTGAGTCACACTTACAGAAGTAACTaGATACTGTTTCAATGCACTGTCCATTTACACACGGGTGTCTTG +
Preference number: 6 (lower is better)
Translates to: YSSVQTSLSHTYRSN*ILFQCTVHLHTGVL
Trigger: CAAGACACCCGTGTGTAAATGGACAGTGCATTGAAACAGTATCAAGTTACTTCTGTAAGTGTGACTCAGGCTGGTTTGGACAGAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp ATCAAATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTTGCTaGGATGGTCCAGTTACAACGTTGGTCTTTATCGTAGGGATTTGG +
Preference number: 6 (lower is better)
Translates to: IKFQKCVVHRVACCC*DGPVTTLVFIVGIW
Trigger: CCAAATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp TTTCCACATCAAATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTaGTTGCTTGGATGGTCCAGTTACAACGTTGGTCTTTATCGTAGG +
Preference number: 6 (lower is better)
Translates to: FPHQIPEMCSSPCCL*LLGWSSYNVGLYRR
Trigger: CCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAATTTGATGTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp ATCAAGTGGCCCGTGGCATTTCCTTCTCGGATTTCCACAAAATCCTaGTTACAGTTTAGAGAGTTCTCCAACTGGAAGGATAGAAAAGAC +
Preference number: 6 (lower is better)
Translates to: IKWPVAFPSRISTKS*LQFREFSNWKDRKD
Trigger: GTCTTTTCTATCCTTCCAGTTGGAGAACTCTCTAAACTGTAACAAGGATTTTGTGGAAATCCGAGAAGGAAATGCCACGGGCCACTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp AAACTGGAATGTCAGAGAGTTTCTGCTGGAGCTAAAGGATTCTCTTaGGGTACCACAGTAAGTGCCAATCAGACGGGAATGAATGTCAAA +
Preference number: 6 (lower is better)
Translates to: KLECQRVSAGAKGFS*GTTVSANQTGMNVK
Trigger: TTTGACATTCATTCCCGTCTGATTGGCACTTACTGTGGTACCCAAAGAGAATCCTTTAGCTCCAGCAGAAACTCTCTGACATTCCAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp TGTTTCAATGCACTGTCCATTTACACACGGGTGTCTTaGGCACATATTACTGAGGCGTACACATCCATTAGA +
Preference number: 6 (lower is better)
Translates to: CFNALSIYTRVS*AHITEAYTSIR
Trigger: TCTAATGGATGTGTACGCCTCAGTAATATGTGCTCAAGACACCCGTGTGTAAATGGACAGTGCATTGAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp CCAGCTGCTGGGATAATCTACTGTCTCCATCTTTTATaGTCAGCTTGTCATAGGAACAAGATAGCTGAGCTT +
Preference number: 6 (lower is better)
Translates to: PAAGIIYCLHLL*SACHRNKIAEL
Trigger: AAGCTCAGCTATCTTGTTCCTATGACAAGCTGATCATAAAAGATGGAGACAGTAGATTATCCCAGCAGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp AATGCTGGGACCATCGAAAACCTCCAGGTAATCATGTaGGCAAAGGTTGGAGGGAACAATCTCAAAATCATT +
Preference number: 6 (lower is better)
Translates to: NAGTIENLQVIM*AKVGGNNLKII
Trigger: AATGATTTTGAGATTGTTCCCTCCAACCTTTGCTCACATGATTACCTGGAGGTTTTCGATGGTCCCAGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp GTACTTAGCCTCAAATTGGTAAAAGTGAGGATAATCTaGCTTCCTTCGTGTACATTGATCGTCCACTCACAG +
Preference number: 6 (lower is better)
Translates to: VLSLKLVKVRII*LPSCTLIVHSQ
Trigger: CTGTGAGTGGACGATCAATGTACACGAAGGAAGGCAGATTATCCTCACTTTTACCAATTTGAGGCTAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp TCTGTAGGAAATCTTGAACCCAAAGTCTGTGATATATaGGTCAGAATAGAAGTTGAGCATCACTGGGCCATC +
Preference number: 6 (lower is better)
Translates to: SVGNLEPKVCDI*VRIEVEHHWAI
Trigger: GATGGCCCAGTGATGCTCAACTTCTATTCTGACGCATATATCACAGACTTTGGGTTCAAGATTTCCTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp AAAACTTCTCATTTCCAGGAGATCCCAAGACAGAGCTaGGACCAATCTCAATGTAATCTGTATCACAGGAAG +
Preference number: 6 (lower is better)
Translates to: KTSHFQEIPRQS*DQSQCNLYHRK
Trigger: CTTCCTGTGATACAGATTACATTGAGATTGGTCCCAGCTCTGTCTTGGGATCTCCTGGAAATGAGAAGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATGCCAGGTACAATTTACACCGCTTGGGTAGACATTTaGATGACCAGGACTTTCAATGATTCCAGTAGATTC +
Preference number: 6 (lower is better)
Translates to: MPGTIYTAWVDI*MTRTFNDSSRF
Trigger: GAATCTACTGGAATCATTGAAAGTCCTGGTCATCCAAATGTCTACCCAAGCGGTGTAAATTGTACCTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp GTAGTAGTTACAGTTCATGTTGTTGTCATAGTGCTTTaGGAAGTTTGGAGAGACGATGTCACCTGTAGAGCT +
Preference number: 6 (lower is better)
Translates to: VVVTVHVVVIVL*EVWRDDVTCRA
Trigger: AGCTCTACAGGTGACATCGTCTCTCCAAACTTCCCAAAGCACTATGACAACAACATGAACTGTAACTACTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GTTGCCTGTTGTTGCTTGGATGGTCCAGTTACAACGTaGGTCTTTATCGTAGGGATTTGGGTAATTTATGCT +
Preference number: 6 (lower is better)
Translates to: VACCCLDGPVTT*VFIVGIWVIYA
Trigger: AGCATAAATTACCCAAATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp ATTCCAGAAATGTGTAGTTCACCGTGTTGCCTGTTGTaGCTTGGATGGTCCAGTTACAACGTTGGTCTTTAT +
Preference number: 6 (lower is better)
Translates to: IPEMCSSPCCLL*LGWSSYNVGLY
Trigger: ATAAAGACCAACGTTGTAACTGGACCATCCAAGCAACAACAGGCAACACGGTGAACTACACATTTCTGGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AGTCACACTTACAGAAGTAACTTGATACTGTTTCAATaGACTGTCCATTTACACACGGGTGTCTTGAGCACA +
Preference number: 6 (lower is better)
Translates to: SHTYRSNLILFQ*TVHLHTGVLST
Trigger: TGTGCTCAAGACACCCGTGTGTAAATGGACAGTGCATTGAAACAGTATCAAGTTACTTCTGTAAGTGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AAAGGACACAAACGTCAGGATGACCAGAGACTGTGGTaGAACATCTATGTAGTAGTTACAGTTCATGTTGTT +
Preference number: 6 (lower is better)
Translates to: KGHKRQDDQRLW*NIYVVVTVHVV
Trigger: AACAACATGAACTGTAACTACTACATAGATGTTGCACCACAGTCTCTGGTCATCCTGACGTTTGTGTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp TTGGACTACTATATGCCAGGTACAATTTACACCGCTTaGGTAGACATTTGGATGACCAGGACTTTCAATGAT +
Preference number: 6 (lower is better)
Translates to: LDYYMPGTIYTA*VDIWMTRTFND
Trigger: ATCATTGAAAGTCCTGGTCATCCAAATGTCTACCCAAGCGGTGTAAATTGTACCTGGCATATAGTAGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp ATGAAAGGACACAAACGTCAGGATGACCAGAGACTGTaGTGCAACATCTATGTAGTAGTTACAGTTCATGTT +
Preference number: 6 (lower is better)
Translates to: MKGHKRQDDQRL*CNIYVVVTVHV
Trigger: AACATGAACTGTAACTACTACATAGATGTTGCACCACAGTCTCTGGTCATCCTGACGTTTGTGTCCTTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GTGTTCCACCACAACCTAAAGTGTTTGTGTTCCATGTaGCATAAAATCCACGACTTTGCCCTTGATTGTTTG +
Preference number: 6 (lower is better)
Translates to: VFHHNLKCLCSM*HKIHDFALDCL
Trigger: CAAACAATCAAGGGCAAAGTCGTGGATTTTATGCAACATGGAACACAAACACTTTAGGTTGTGGTGGAACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp TATCTGAGTGAAGTGTTCCACCACAACCTAAAGTGTTaGTGTTCCATGTTGCATAAAATCCACGACTTTGCC +
Preference number: 6 (lower is better)
Translates to: YLSEVFHHNLKC*CSMLHKIHDFA
Trigger: GGCAAAGTCGTGGATTTTATGCAACATGGAACACAAACACTTTAGGTTGTGGTGGAACACTTCACTCAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp TTGCTTGGATGGTCCAGTTACAACGTTGGTCTTTATCGTAGGGATTaGGGTAATTTATGCTCTCCAAGATGCCAGAGGTTTTATTCACTA +
Preference number: 6 (lower is better)
Translates to: LLGWSSYNVGLYRRD*GNLCSPRCQRFYSL
Trigger: TAGTGAATAAAACCTCTGGCATCTTGGAGAGCATAAATTACCCAAATCCCTACGATAAAGACCAACGTTGTAACTGGACCATCCAAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp GTCAAAGTCAGTAATGTTCAAAAGAACACGGTGATATTTCTCAACTaGAATGATCCAAGAGCACTCCGTGTTAGCTCTGTAGTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: VKVSNVQKNTVIFLN*NDPRALRVSSVVVG
Trigger: CCCAACAACTACAGAGCTAACACGGAGTGCTCTTGGATCATTCAAGTTGAGAAATATCACCGTGTTCTTTTGAACATTACTGACTTTGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 90 bp GATGGTTCCTCCAGAGTAAATGCATTGAAGGTGAGCTTAACAAGTTaGTTTTCAGGGGCAATTATGTACCATATGCAGTTTAGACCTTTG +
Preference number: 6 (lower is better)
Translates to: DGSSRVNALKVSLTS*FSGAIMYHMQFRPL
Trigger: CAAAGGTCTAAACTGCATATGGTACATAATTGCCCCTGAAAACAAACTTGTTAAGCTCACCTTCAATGCATTTACTCTGGAGGAACCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CCA 72 bp TCCGTTGTGGTCCATCATAGAGCTCTAAGTAATCTGTaGAGCAGTTTACGTAATTTTCCACATCAAATTCCA +
Preference number: 6 (lower is better)
Translates to: SVVVHHRALSNL*SSLRNFPHQIP
Trigger: TGGAATTTGATGTGGAAAATTACGTAAACTGCTCCACAGATTACTTAGAGCTCTATGATGGACCACAACGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp CTCAAGATCCACGAGCTTCGAGTTAAGTTGGTGGACTaGACTAAGTATATTTTGAGGAAGACCAGTTGTATT +
Preference number: 6 (lower is better)
Translates to: LKIHELRVKLVD*TKYILRKTSCI
Trigger: AATACAACTGGTCTTCCTCAAAATATACTTAGTCAAGTCCACCAACTTAACTCGAAGCTCGTGGATCTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp AAAATCTCTCTCAAGATCCACGAGCTTCGAGTTAAGTaGGTGGACTTGACTAAGTATATTTTGAGGAAGACC +
Preference number: 6 (lower is better)
Translates to: KISLKIHELRVK*VDLTKYILRKT
Trigger: GGTCTTCCTCAAAATATACTTAGTCAAGTCCACCAACTTAACTCGAAGCTCGTGGATCTTGAGAGAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp GTGAGTAAAGGAGAGAGCAATATGATTGAATGGAGGTaGAGCTTCAATTATCCAGGTACAGTTCTGGTTGTT +
Preference number: 6 (lower is better)
Translates to: VSKGESNMIEWR*SFNYPGTVLVV
Trigger: AACAACCAGAACTGTACCTGGATAATTGAAGCTCAACCTCCATTCAATCATATTGCTCTCTCCTTTACTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp TGTTCCCCCACAAGGCATGTCCACAAAGGTATATGTTaGATTAAATCCTCTCATTTGAATACTTATGTCAGA +
Preference number: 6 (lower is better)
Translates to: CSPTRHVHKGIC*IKSSHLNTYVR
Trigger: TCTGACATAAGTATTCAAATGAGAGGATTTAATGCAACATATACCTTTGTGGACATGCCTTGTGGGGGAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS GCA 72 bp AACGTTGGTCTTTATCGTAGGGATTTGGGTAATTTATaGTCTCCAAGATGCCAGAGGTTTTATTCACTATTA +
Preference number: 6 (lower is better)
Translates to: NVGLYRRDLGNL*SPRCQRFYSLL
Trigger: TAATAGTGAATAAAACCTCTGGCATCTTGGAGAGCATAAATTACCCAAATCCCTACGATAAAGACCAACGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS CAA 72 bp AGTGTTTGTGTTCCATGTTGCATAAAATCCACGACTTaGCCCTTGATTGTTTGTGTTAAAGGTTACTACAAG +
Preference number: 6 (lower is better)
Translates to: SVCVPCCIKSTT*PLIVCVKGYYK
Trigger: CTTGTAGTAACCTTTAACACAAACAATCAAGGGCAAAGTCGTGGATTTTATGCAACATGGAACACAAACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7
CDS TCA 72 bp AATCCTTGTCCACCGTTACTATTATCAGAGATGAACTaGATAAACATTTCATTGTCTGAGGTGAAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: NPCPPLLLSEMN*INISLSEVKRV
Trigger: AACTCTCTTCACCTCAGACAATGAAATGTTTATTCAGTTCATCTCTGATAATAGTAACGGTGGACAAGGATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000091436.7