Pregenerated sensors for CTTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031078Ensembl transcript IDs: ENSMUST00000033407.13, ENSMUST00000103079.4
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCCTGCCCAGCCAAGTGGCTGGGCACACACACCTCATTGCAGGCTaGTCAGGGGTCATGAGCAGGTCCAAGACCCCCGTCCCAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: SLPSQVAGHTHLIAG*SGVMSRSKTPVPSL Trigger: GAGGCTTGGGACGGGGGTCTTGGACCTGCTCATGACCCCTGAGCAGCCTGCAATGAGGTGTGTGTGCCCAGCCACTTGGCTGGGCAGGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 90 bp | TCCTCCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTaGCCACCCCAGGAGCACTGTCTCCATCCTGGGAACCTGACTACA | + |
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Preference number: 1 (lower is better) Translates to: SSSSKHWTPESLLTE*PPQEHCLHPGNLTT Trigger: TGTAGTCAGGTTCCCAGGATGGAGACAGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 90 bp | AGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTaGGCACACACACCTCATTGCAGGCTGCTCAGGGGTCATGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SLQEEAIYLPAQPSG*AHTPHCRLLRGHEQ Trigger: CTGCTCATGACCCCTGAGCAGCCTGCAATGAGGTGTGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR GCA 90 bp | ACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTaGCCAGCCAAGTGGCTGGGCACACACACCTCATTGCAGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: TACFWKLAGRSYLSP*PAKWLGTHTSLQAA Trigger: AGCAGCCTGCAATGAGGTGTGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 90 bp | GGAGGTACAGAGATGAGGAGACAGAGTAAAGGAAGCATGGGGTCCTaGCTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTC | + |
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Preference number: 1 (lower is better) Translates to: GGTEMRRQSKGSMGS*LKWSGLTDRTSLSV Trigger: GACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCCCATGCTTCCTTTACTCTGTCTCCTCATCTCTGTACCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 90 bp | GAGATGAGGAGACAGAGTAAAGGAAGCATGGGGTCCTGGCTTAAGTaGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: EMRRQSKGSMGSWLK*SGLTDRTSLSVNAL Trigger: TAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCCCATGCTTCCTTTACTCTGTCTCCTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR GCA 90 bp | ACTGAACATATTTGGCAAAAAGAACACAGCGTGCTTCTGGAAGCTTaGAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: TEHIWQKEHSVLLEA*RKKLSISLPSQVAG Trigger: CCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCTTTTTGCCAAATATGTTCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACAAGCCTCCTCACTGAGTaGCCACCCCAGGAGCACTGT | + |
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Preference number: 2 (lower is better) Translates to: ACRKKLSISLPSQVAGHTSLLTE*PPQEHC Trigger: ACAGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCT...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR TCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACAAGATGCTCTGTAGTGTaGACCCTGTGCTGGTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: ACRKKLSISLPSQVAGHTRCSVV*TLCWCR Trigger: CCGGCACCAGCACAGGGTTCACACTACAGAGCATCT...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACACAATGGGGATGGGGGTaGGCACAAGGCCACATGTAC | + |
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Preference number: 2 (lower is better) Translates to: ACRKKLSISLPSQVAGHTQWGWG*AQGHMY Trigger: GTACATGTGGCCTTGTGCCCACCCCCATCCCCATTG...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | CCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAAACGGGCCCTGCCCAGCCAAGTaGCTGGGCACACACACCTCA | + |
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Preference number: 2 (lower is better) Translates to: PNNGKARILQESTRGENGPCPAK*LGTHTS Trigger: TGAGGTGTGTGTGCCCAGCCACTTGGCTGGGCAGGG...CCCGTTTTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGGGGTCCTGGCTTAAGTaGTCAGGACTGACAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: LEACRKKLSISLPSQVAGGSWLK*SGLTDR Trigger: CCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCC...CCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR GCA 90 bp | AGAACACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCGCACACACACCTCATTaGAGGCTGCTCAGGGGTCAT | + |
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Preference number: 2 (lower is better) Translates to: RTQRASGSLQEEAIYLPAAHTPH*RLLRGH Trigger: ATGACCCCTGAGCAGCCTGCAATGAGGTGTGTGTGC...GGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | AGAACACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCGGGTCCTGGCTTAAGTaGTCAGGACTGACAGATAGG | + |
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Preference number: 2 (lower is better) Translates to: RTQRASGSLQEEAIYLPAGSWLK*SGLTDR Trigger: CCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCC...GGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | CACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGACTATAACTGAACATAGGGCCAACCAGGACTaGGGTGTCAGGGGAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: HSVLFSATSIYQLTITEHRANQD*GVRGGT Trigger: TGTACCTCCCCTGACACCCCAGTCCTGGTTGGCCCT...ATGTTCAGTTATAGTCAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR GCA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGAGCACATCTCTGAGATaGACTTTGTGCTATAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: VGASVHSVLFSATSIYQLSTSLR*TLCYRP Trigger: AGGCCTATAGCACAAAGTGCATCTCAGAGATGTGCT...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR TCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACAAGATGCTCTGTAGTGTaGACCCTGTGCTGGTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTRCSVV*TLCWCR Trigger: CCGGCACCAGCACAGGGTTCACACTACAGAGCATCT...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | ACCTATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACATGGAGGCACCCAGGTaGGAGCATCAGTTCACTCGG | + |
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Preference number: 2 (lower is better) Translates to: TYEVCYRIPDDNSYRKPNMEAPR*EHQFTR Trigger: CCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCAT...GTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCAACCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAATAACTGAACATATTTaGCAAAAAGAACACAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: TQPNNGKARILQESTRGEITEHI*QKEHSV Trigger: CACGCTGTGTTCTTTTTGCCAAATATGTTCAGTTAT...TTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGATAACTGAACATATTTaGCAAAAAGAACACAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: VGASVHSVLFSATSIYQLITEHI*QKEHSV Trigger: CACGCTGTGTTCTTTTTGCCAAATATGTTCAGTTAT...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACAAACACAGCGTGCTTCTaGAAGCTTGCAGGAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTNTACF*KLAGRS Trigger: GCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTT...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR GCA 90 bp | ACCTATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACAGCACATCTCTGAGATaGACTTTGTGCTATAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: TYEVCYRIPDDNSYRKPNSTSLR*TLCYRP Trigger: AGGCCTATAGCACAAAGTGCATCTCAGAGATGTGCT...GTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR GCA 72 bp | AGCCAAGTGGCTGGGCACACACACCTCATTGCAGGCTaGTCAGGGGTCATGAGCAGGTCCAAGACCCCCGTC | + |
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Preference number: 3 (lower is better) Translates to: SQVAGHTHLIAG*SGVMSRSKTPV Trigger: GACGGGGGTCTTGGACCTGCTCATGACCCCTGAGCAGCCTGCAATGAGGTGTGTGTGCCCAGCCACTTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 72 bp | TCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTaGCCACCCCAGGAGCACTGTCTCCATCCTGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: SKHWTPESLLTE*PPQEHCLHPGN Trigger: GTTCCCAGGATGGAGACAGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 72 bp | CTTCCCTTTGGTCCCCTTTCCTCCTCTTCCAAACACTaGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCC | + |
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Preference number: 3 (lower is better) Translates to: LPFGPLSSSSKH*TPESLLTEWPP Trigger: GGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGGAGGAAAGGGGACCAAAGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 72 bp | GCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTaGCTGGGCACACACACCTCATTGCAGGCTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: AGRSYLSPCPAK*LGTHTSLQAAQ Trigger: CTGAGCAGCCTGCAATGAGGTGTGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 72 bp | AGACAGAGTAAAGGAAGCATGGGGTCCTGGCTTAAGTaGTCAGGACTGACAGATAGGACTTCCCTCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: RQSKGSMGSWLK*SGLTDRTSLSV Trigger: GACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCCCATGCTTCCTTTACTCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 72 bp | GAGATGAGGAGACAGAGTAAAGGAAGCATGGGGTCCTaGCTTAAGTGGTCAGGACTGACAGATAGGACTTCC | + |
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Preference number: 3 (lower is better) Translates to: EMRRQSKGSMGS*LKWSGLTDRTS Trigger: GGAAGTCCTATCTGTCAGTCCTGACCACTTAAGCCAGGACCCCATGCTTCCTTTACTCTGTCTCCTCATCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR TCA 72 bp | GCAGGCCAAGCCCAGGATAAGCCACTAGCACATCTCTaGGATGCACTTTGTGCTATAGGCCTTGAATGCAAT | + |
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Preference number: 3 (lower is better) Translates to: AGQAQDKPLAHL*DALCAIGLECN Trigger: ATTGCATTCAAGGCCTATAGCACAAAGTGCATCTCAGAGATGTGCTAGTGGCTTATCCTGGGCTTGGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CCA 72 bp | CTGAACATATTTGGCAAAAAGAACACAGCGTGCTTCTaGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: LNIFGKKNTACF*KLAGRSYLSPC Trigger: GCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCTTTTTGCCAAATATGTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR-3UTR CAA 90 bp | TATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTACGTGCTTCTGGAAGCTaGCAGGAAGAAGCTATCTAT | + |
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Preference number: 3 (lower is better) Translates to: YEVCYRIPDDNSYRKPNLRASGS*QEEAIY Trigger: ATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACG...TAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR TCA 72 bp | GTTTTCAGCCACATCAATCTATCAGCTGACTATAACTaGACATATTTGGCAAAAAGAACACAGCGTGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: VFSHINLSADYN*TYLAKRTQRAS Trigger: AGAAGCACGCTGTGTTCTTTTTGCCAAATATGTTCAGTTATAGTCAGCTGATAGATTGATGTGGCTGAAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGGCTCTTCCAGCTTCCTaGGCGCCTCCTCCTGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PLPNTGPQRASSLSGHPRALPAS*APPPAP Trigger: AGGAGCAGGAGGAGGCGCGCAGGAAGCTGGAAGAGC...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGAGCTCTCTCGGCTTCTaGCTTCCGCCTGTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: PLPNTGPQRASSLSGHPRSSLGF*LPPVLL Trigger: CAGGAGGACAGGCGGAAGGCAGAAGCCGAGAGAGCT...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | GACTTCAGGGCAAGGCAGGAGAAAGGGCCAACCAGGACTGGGGTGTCAGGGGAGCTGCGCGCCTCCTCCTaGTCCTGTCTTTCTTTGGCC | + |
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Preference number: 4 (lower is better) Translates to: DFRARQEKGPTRTGVSGELRASS*SCLSLA Trigger: GGCCAAAGAAAGACAGGAGCAGGAGGAGGCGCGCAG...CTCCCCTGACACCCCAGTCCTGGTTGGCCCTTTCTCCTGCCTTGCCCTGAAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGAGCACTTCCATCCGATCCTTCTaGACCCCATACTTCCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: PNTGPQRASSLSGHPRSTSIRSF*TPYFPP Trigger: CGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGA...AGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR TCA 90 bp | GACTTCAGGGCAAGGCAGGAGAAAGGGCCAACCAGGACTGGGGTGTCAGGGGAGAAGCCTACAGCAGACTaGTCCACCCTGTCCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: DFRARQEKGPTRTGVSGEKPTAD*STLSIW Trigger: CCAGATGGACAGGGTGGATCAGTCTGCTGTAGGCTT...CTCCCCTGACACCCCAGTCCTGGTTGGCCCTTTCTCCTGCCTTGCCCTGAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGAGCACTGCTCCTCCATCATCCTaGGTGATGGACACAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: PNTGPQRASSLSGHPRSTAPPSS*VMDTAW Trigger: CCATGCTGTGTCCATCACGCAGGATGATGGAGGAGC...AGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGAGCACTTTGATGTGTTCCTGGTaGCCCGATCCCTGCACGGTT | + |
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Preference number: 4 (lower is better) Translates to: PNTGPQRASSLSGHPRSTLMCSW*PDPCTV Trigger: AACCGTGCAGGGATCGGGGCACCAGGAACACATCAA...AGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGGTGATGGACACAGCATaGCCTGCAGAGGCTTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: PLPNTGPQRASSLSGHPRVMDTA*PAEAFH Trigger: GTGGAAAGCCTCTGCAGGCCATGCTGTGTCCATCAC...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | GACTTCAGGGCAAGGCAGGAGAAAGGGCCAACCAGGACTGGGGTGTCAGGGGAGCATGCTTCTCCGTCTTaGCCTGGTAGTCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: DFRARQEKGPTRTGVSGEHASPS*PGSQSP Trigger: TGGGCTTTGACTACCAGGGCAAGACGGAGAAGCATG...CTCCCCTGACACCCCAGTCCTGGTTGGCCCTTTCTCCTGCCTTGCCCTGAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGAGCACTCATGCTTCTCCGTCTTaGCCTGGTAGTCAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PNTGPQRASSLSGHPRSTHASPS*PGSQSP Trigger: TGGGCTTTGACTACCAGGGCAAGACGGAGAAGCATG...AGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGAGCTCTCTCGGCTTCTaGCTTCCGCCTGTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LEACRKKLSISLPSQVAGSSLGF*LPPVLL Trigger: CAGGAGGACAGGCGGAAGGCAGAAGCCGAGAGAGCT...CCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACAGATGCAGGGGGCGTCTaGTTCTTGGCTCTGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: ACRKKLSISLPSQVAGHTDAGGV*FLALAC Trigger: GCAAGCCAGAGCCAAGAAGCAGACGCCCCCTGCATC...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | CTCAAGGAAGCCATGGAGGCACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTCCACCCTGTCCATCTaGACACCGAACTTGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKEAMEAPRWEHQFTRSCSTLSI*TPNLPP Trigger: CGGAGGCAAGTTCGGTGTCCAGATGGACAGGGTGGA...ACAGGACCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCATGGCTTCCTTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | GCACTGTCTCCATCCTGGGAACCTGACTACAATGGGGATGGGGGTGGGCACAAGGGGGCGTCTGCTTCTTaGCTCTGGCTTGCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSPSWEPDYNGDGGGHKGASAS*LWLALP Trigger: TGGAAGAGCAAGCCAGAGCCAAGAAGCAGACGCCCC...CTTGTGCCCACCCCCATCCCCATTGTAGTCAGGTTCCCAGGATGGAGACAGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGCCTCATAGATGGGGCTaGAGGGTGGTCTGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLPNTGPQRASSLSGHPRPHRWG*RVVCLQ Trigger: TTGAAGACAGACCACCCTCCAGCCCCATCTATGAGG...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGCTTCTGATAGGCAGATaGCACCTGGACCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PLPNTGPQRASSLSGHPRLLIGR*HLDHFF Trigger: GAAGAAGTGGTCCAGGTGCCATCTGCCTATCAGAAG...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACAAAGCCTACAGCAGACTaGTCCACCCTGTCCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACRKKLSISLPSQVAGHTKPTAD*STLSIW Trigger: CCAGATGGACAGGGTGGATCAGTCTGCTGTAGGCTT...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | GACTTCAGGGCAAGGCAGGAGAAAGGGCCAACCAGGACTGGGGTGTCAGGGGAGTTCTCTGTCTTGCCTTaGTACTCAAAGCCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DFRARQEKGPTRTGVSGEFSVLP*YSKPTA Trigger: TGCTGTGGGCTTTGAGTATCAAGGCAAGACAGAGAA...CTCCCCTGACACCCCAGTCCTGGTTGGCCCTTTCTCCTGCCTTGCCCTGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | GACTTCAGGGCAAGGCAGGAGAAAGGGCCAACCAGGACTGGGGTGTCAGGGGAGCGTGCTTCTCTGTCTTaGCTTGATACTCAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DFRARQEKGPTRTGVSGERASLS*LDTQSP Trigger: TGGGCTTTGAGTATCAAGGCAAGACAGAGAAGCACG...CTCCCCTGACACCCCAGTCCTGGTTGGCCCTTTCTCCTGCCTTGCCCTGAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGCTTGTGAGCAGTGCTTaGAAAGCTTCGACTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PLPNTGPQRASSLSGHPRLVSSA*KASTGT Trigger: AGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAG...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGAAGCCATGGAGGCACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTCTGCTTCTTGGCTCTaGCTTGCTCTTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKEAMEAPRWEHQFTRSCSASWL*LALPAS Trigger: GGAAGCTGGAAGAGCAAGCCAGAGCCAAGAAGCAGA...ACAGGACCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCATGGCTTCCTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACACTGCATCCTCATAGATaGGGCTGGAGGGTGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ACRKKLSISLPSQVAGHTLHPHR*GWRVVC Trigger: ACAGACCACCCTCCAGCCCCATCTATGAGGATGCAG...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGCCAGCTCCTTCTCCTTaGGCGTCTGGTGTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGSLQEEAIYLPAQPSGWPAPSP*ASGVLG Trigger: TCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGG...CCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGTCCTGCCTCTCGGACTaGACACCAAATTTGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SGSLQEEAIYLPAQPSGWSCLSD*TPNLPP Trigger: CGGAGGCAAATTTGGTGTTCAGTCCGAGAGGCAGGA...CCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | AGAACACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCTGCGCGCCTCCTCCTaGTCCTGTCTTTCTTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQRASGSLQEEAIYLPALRASS*SCLSLA Trigger: GGCCAAAGAAAGACAGGAGCAGGAGGAGGCGCGCAG...GGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | ACCCAACCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAATCAGGCCTTGCTGGCTaGCAGCCTCAGGAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQPNNGKARILQESTRGESGLAG*QPQECL Trigger: CAGGCATTCCTGAGGCTGGCAGCCAGCAAGGCCTGA...TTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CTCAAGGAAGCCATGGAGGCACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTCTTCTGATAGGCAGATaGCACCTGGACCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKEAMEAPRWEHQFTRSCLLIGR*HLDHFF Trigger: GAAGAAGTGGTCCAGGTGCCATCTGCCTATCAGAAG...ACAGGACCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCATGGCTTCCTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACAGCTCCTGTCTTTCTTTaGCCATCCGCTGAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACRKKLSISLPSQVAGHTAPVFL*PSAELS Trigger: AGAGAGCTCAGCGGATGGCCAAAGAAAGACAGGAGC...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGTCTGCTTCTTGGCTCTaGCTTGCTCTTCCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LEACRKKLSISLPSQVAGSASWL*LALPAS Trigger: GGAAGCTGGAAGAGCAAGCCAGAGCCAAGAAGCAGA...CCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGGATGGGGCTGGAGGGTaGTCTGTCTTCAATTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEACRKKLSISLPSQVAGDGAGG*SVFNWL Trigger: CAACCAATTGAAGACAGACCACCCTCCAGCCCCATC...CCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGCTCCACATAGTTGGCTaGGAAGAGCCCGTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SGSLQEEAIYLPAQPSGWLHIVG*EEPVSA Trigger: GGCAGATACGGGCTCTTCCCAGCCAACTATGTGGAG...CCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | GCACTGTCTCCATCCTGGGAACCTGACTACAATGGGGATGGGGGTGGGCACAAGCGTGCTTCTCTGTCTTaGCTTGATACTCAAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSPSWEPDYNGDGGGHKRASLS*LDTQSP Trigger: TGGGCTTTGAGTATCAAGGCAAGACAGAGAAGCACG...CTTGTGCCCACCCCCATCCCCATTGTAGTCAGGTTCCCAGGATGGAGACAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | CCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAAACGGGGGCCTTGAACGGAGCTaGATCCTCATAGATGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNNGKARILQESTRGENGGLERS*ILIDGA Trigger: AGCCCCATCTATGAGGATGCAGCTCCGTTCAAGGCC...CCCGTTTTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTAGGATCAGGCCTTGCTGGCTaGCAGCCTCAGGAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKWSGLTDRTSLSVNALGSGLAG*QPQECL Trigger: CAGGCATTCCTGAGGCTGGCAGCCAGCAAGGCCTGA...TCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | AGAAGCGCAACCCCTGAAGTGGCTACATACCACAGTCAGCTTGGCAAAACTAAAGGAAGAGCCCGTATCTaGCCTTGCACACCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSATPEVATYHSQLGKTKGRARI*PCTPHA Trigger: GGCGTGGGGTGTGCAAGGGCAGATACGGGCTCTTCC...TTTAGTTTTGCCAAGCTGACTGTGGTATGTAGCCACTTCAGGGGTTGCGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCCACCCTGTCCATCTaGACACCGAACTTGCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: HPGGSISSLGPVFSHINLSTLSI*TPNLPP Trigger: CGGAGGCAAGTTCGGTGTCCAGATGGACAGGGTGGA...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTAGGGGCGTCTGCTTCTTaGCTCTGGCTTGCTCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPGGSISSLGPVFSHINLGASAS*LWLALP Trigger: TGGAAGAGCAAGCCAGAGCCAAGAAGCAGACGCCCC...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR TCA 90 bp | AGAAGCGCAACCCCTGAAGTGGCTACATACCACAGTCAGCTTGGCAAAACTAAATCTTTGGCCATCCGCTaGGCTCTCTCGGCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RSATPEVATYHSQLGKTKSLAIR*ALSASA Trigger: GGCAGAAGCCGAGAGAGCTCAGCGGATGGCCAAAGA...TTTAGTTTTGCCAAGCTGACTGTGGTATGTAGCCACTTCAGGGGTTGCGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | AGAACACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCTTGATGTGTTCCTGGTaGCCCGATCCCTGCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RTQRASGSLQEEAIYLPALMCSW*PDPCTV Trigger: AACCGTGCAGGGATCGGGGCACCAGGAACACATCAA...GGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | AGAACACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCTTCTTGGCTCTGGCTTaGTCTTCCAGCTTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RTQRASGSLQEEAIYLPAFLALA*SSSFLR Trigger: GCGCAGGAAGCTGGAAGAGCAAGCCAGAGCCAAGAA...GGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | AGAAGCGCAACCCCTGAAGTGGCTACATACCACAGTCAGCTTGGCAAAACTAAAGATGCAGGGGGCGTCTaGTTCTTGGCTCTGGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSATPEVATYHSQLGKTKDAGGV*FLALAC Trigger: GCAAGCCAGAGCCAAGAAGCAGACGCCCCCTGCATC...TTTAGTTTTGCCAAGCTGACTGTGGTATGTAGCCACTTCAGGGGTTGCGCTTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTAGTGATGGACACAGCATaGCCTGCAGAGGCTTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPGGSISSLGPVFSHINLVMDTA*PAEAFH Trigger: GTGGAAAGCCTCTGCAGGCCATGCTGTGTCCATCAC...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | GCACTGTCTCCATCCTGGGAACCTGACTACAATGGGGATGGGGGTGGGCACAAGTTCTCAGTCTTCCCCTaGTATTCAAAGCCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALSPSWEPDYNGDGGGHKFSVFP*YSKPTA Trigger: TGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAA...CTTGTGCCCACCCCCATCCCCATTGTAGTCAGGTTCCCAGGATGGAGACAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | GCACTGTCTCCATCCTGGGAACCTGACTACAATGGGGATGGGGGTGGGCACAAGTTCTTCAAAGGTGGATaGATTCTTGTCCATCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: ALSPSWEPDYNGDGGGHKFFKGG*ILVHPI Trigger: GATCGGATGGACAAGAATGCATCCACCTTTGAAGAA...CTTGTGCCCACCCCCATCCCCATTGTAGTCAGGTTCCCAGGATGGAGACAGTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCTTGCTGGGACTCGTaGTTGGCCAATCTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGGSISSLGPVFSHINLSCWDS*LANLSL Trigger: CAAGGAGAGATTGGCCAAGCACGAGTCCCAGCAAGA...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTAGATGGGGCTGGAGGGTaGTCTGTCTTCAATTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGGSISSLGPVFSHINLDGAGG*SVFNWL Trigger: CAACCAATTGAAGACAGACCACCCTCCAGCCCCATC...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | CTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTAGGAGAAGCTTGTGAATGTTaGTGTGTTCCTGGTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LKWSGLTDRTSLSVNALGEACEC*CVPGAP Trigger: CGGGGCACCAGGAACACATCAACATTCACAAGCTTC...TCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | CTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTAGGAGACCGAGTCCACTTGTaGGCAGTGCTTGGAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKWSGLTDRTSLSVNALGDRVHL*AVLGKL Trigger: AAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTC...TCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGTCTTTCTGGGAGGCATaGTTCTCAGTCTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGASVHSVLFSATSIYQLSFWEA*FSVFPW Trigger: CCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGA...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCAGGACATGCCCCGAAGCATCAGCAGATGTATTAAATATAAAGTCAATGCTCTTCCAGCTTCCTaGGCGCCTCCTCCTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LWQDMPRSISRCIKYKVNALPAS*APPPAP Trigger: AGGAGCAGGAGGAGGCGCGCAGGAAGCTGGAAGAGC...ATTGACTTTATATTTAATACATCTGCTGATGCTTCGGGGCATGTCCTGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTAGGAGCTCCTGTCTTTCTTTaGCCATCCGCTGAGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKWSGLTDRTSLSVNALGAPVFL*PSAELS Trigger: AGAGAGCTCAGCGGATGGCCAAAGAAAGACAGGAGC...TCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGCCTCATAGATGGGGCTaGAGGGTGGTCTGTCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGASVHSVLFSATSIYQLPHRWG*RVVCLQ Trigger: TTGAAGACAGACCACCCTCCAGCCCCATCTATGAGG...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCAGGACATGCCCCGAAGCATCAGCAGATGTATTAAATATAAAGTCAATAGCTCGGCTCGGCCTTaGACGGAGCTGCATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LWQDMPRSISRCIKYKVNSSARP*TELHPH Trigger: ATGAGGATGCAGCTCCGTTCAAGGCCGAGCCGAGCT...ATTGACTTTATATTTAATACATCTGCTGATGCTTCGGGGCATGTCCTGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR GCA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGTCCACTTGTGAGCAGTaGTTGGAAAGCTTCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGASVHSVLFSATSIYQLSTCEQ*LESFDW Trigger: CCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGA...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | ACCCAACCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAAGCGTCTGGTGTTCTTaGAAGACATTCTCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQPNNGKARILQESTRGESVWCS*KTFSRS Trigger: GCTTCGAGAGAATGTCTTCCAAGAACACCAGACGCT...TTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
||
| CDS-3UTR CCA 90 bp | CCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAAACGGGCCACTTCTTCAAAGGTaGATGCATTCTTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PNNGKARILQESTRGENGPLLQR*MHSCPS Trigger: GGATGGACAAGAATGCATCCACCTTTGAAGAAGTGG...CCCGTTTTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | CTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTAGGAGCTGGGACTCGTGCTTaGCCAATCTCTCCTTGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LKWSGLTDRTSLSVNALGAGTRA*PISPCN Trigger: ATTACAAGGAGAGATTGGCCAAGCACGAGTCCCAGC...TCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | AGAAGCGCAACCCCTGAAGTGGCTACATACCACAGTCAGCTTGGCAAAACTAAATCCCGCCGAATCCTTTaGCATAGTCTTGCTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: RSATPEVATYHSQLGKTKSRRIL*HSLAGT Trigger: AGTCCCAGCAAGACTATGCCAAAGGATTCGGCGGGA...TTTAGTTTTGCCAAGCTGACTGTGGTATGTAGCCACTTCAGGGGTTGCGCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS-3UTR TCA 90 bp | AAAACAGAAACGGAAGCAGAAACCAACTCAAACACACGCAGATGCTCTGTAGTGCCAGCTCCTTCTCCTTaGGCGTCTGGTGTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KTETEAETNSNTRRCSVVPAPSP*ASGVLG Trigger: TCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGG...CACTACAGAGCATCTGCGTGTGTTTGAGTTGGTTTCTGCTTCCGTTTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | AAAACAGAAACGGAAGCAGAAACCAACTCAAACACACGCAGATGCTCTGTAGTGGGCCTTGAACGGAGCTaGATCCTCATAGATGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KTETEAETNSNTRRCSVVGLERS*ILIDGA Trigger: AGCCCCATCTATGAGGATGCAGCTCCGTTCAAGGCC...CACTACAGAGCATCTGCGTGTGTTTGAGTTGGTTTCTGCTTCCGTTTCTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| 3UTR CAA 72 bp | TATTTGGCAAAAAGAACACAGCGTGCTTCTGGAAGCTaGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLAKRTQRASGS*QEEAIYLPAQP Trigger: TGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCTTTTTGCCAAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | CACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGACTATAACTGAACATGCTCCTCCATCATCCTaGGTGATGGACACAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVLFSATSIYQLTITEHAPPSS*VMDTAW Trigger: CCATGCTGTGTCCATCACGCAGGATGATGGAGGAGC...ATGTTCAGTTATAGTCAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | AAAACAGAAACGGAAGCAGAAACCAACTCAAACACACGCAGATGCTCTGTAGTGTCTTTCTGGGAGGCATaGTTCTCAGTCTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KTETEAETNSNTRRCSVVSFWEA*FSVFPW Trigger: CCAGGGGAAGACTGAGAAGCATGCCTCCCAGAAAGA...CACTACAGAGCATCTGCGTGTGTTTGAGTTGGTTTCTGCTTCCGTTTCTGTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACAGGAAGAGCCCGTATCTaGCCTTGCACACCCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTGRARI*PCTPHA Trigger: GGCGTGGGGTGTGCAAGGGCAGATACGGGCTCTTCC...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGCCACTTCTTCAAAGGTaGATGCATTCTTGTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VGASVHSVLFSATSIYQLPLLQR*MHSCPS Trigger: GGATGGACAAGAATGCATCCACCTTTGAAGAAGTGG...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR TCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACATCTTTGGCCATCCGCTaGGCTCTCTCGGCTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTSLAIR*ALSASA Trigger: GGCAGAAGCCGAGAGAGCTCAGCGGATGGCCAAAGA...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR TCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACAAGCTCGGCTCGGCCTTaGACGGAGCTGCATCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTSSARP*TELHPH Trigger: ATGAGGATGCAGCTCCGTTCAAGGCCGAGCCGAGCT...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACATCCATCCGATCCTTCTaGACCCCATACTTCCCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTSIRSF*TPYFPP Trigger: CGGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGA...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | AAAACAGAAACGGAAGCAGAAACCAACTCAAACACACGCAGATGCTCTGTAGTGTGGTCTGTCTTCAATTaGTTGAGGACTAGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KTETEAETNSNTRRCSVVWSVFN*LRTRGC Trigger: GCATCCCCTAGTCCTCAACCAATTGAAGACAGACCA...CACTACAGAGCATCTGCGTGTGTTTGAGTTGGTTTCTGCTTCCGTTTCTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACACTCCACATAGTTGGCTaGGAAGAGCCCGTATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTLHIVG*EEPVSA Trigger: GGCAGATACGGGCTCTTCCCAGCCAACTATGTGGAG...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR TCA 90 bp | ACCTATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACGAAGCTTGTGAATGTTaGTGTGTTCCTGGTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TYEVCYRIPDDNSYRKPNEACEC*CVPGAP Trigger: CGGGGCACCAGGAACACATCAACATTCACAAGCTTC...GTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | TATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTATTCTTGGCTCTGGCTTaGTCTTCCAGCTTCCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YEVCYRIPDDNSYRKPNLFLALA*SSSFLR Trigger: GCGCAGGAAGCTGGAAGAGCAAGCCAGAGCCAAGAA...TAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | ACCTATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACAGCGTCTGGTGTTCTTaGAAGACATTCTCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TYEVCYRIPDDNSYRKPNSVWCS*KTFSRS Trigger: GCTTCGAGAGAATGTCTTCCAAGAACACCAGACGCT...GTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACATGGTCTGTCTTCAATTaGTTGAGGACTAGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTWSVFN*LRTRGC Trigger: GCATCCCCTAGTCCTCAACCAATTGAAGACAGACCA...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CCA 90 bp | GAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACATCCCGCCGAATCCTTTaGCATAGTCTTTTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: EVCYRIPDDNSYRKPNLTSRRIL*HSLFGI Trigger: AATCCCAAAAAGACTATGCCAAAGGATTCGGCGGGA...TGTTAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033407.13 |
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| CDS-3UTR CCA 90 bp | TATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTATTCTCAGTCTTCCCCTaGTATTCAAAGCCTACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YEVCYRIPDDNSYRKPNLFSVFP*YSKPTA Trigger: TGCTGTAGGCTTTGAATACCAGGGGAAGACTGAGAA...TAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR GCA 90 bp | TATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAACTGAACACCAAATTTaGCTCCGAAACCAGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YEVCYRIPDDNSYRKPNLTEHQI*LRNQSY Trigger: ATAAGACTGGTTTCGGAGGCAAATTTGGTGTTCAGT...TAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CCTCTTCCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGATCTGGACACCGAACTaGCCTCCGAAGCCCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: PLPNTGPQRASSLSGHPRIWTPN*PPKPRT Trigger: GGTCCGGGGCTTCGGAGGCAAGTTCGGTGTCCAGAT...CCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGGAAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 90 bp | TTCCTGCGCGCCTCCTCCTGCTCCTGTCTTTCTTTGGCCATCCGCTaGGCTCTCTCGGCTTCTGCCTTCCGCCTGTCCTCCTGCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLRASSCSCLSLAIR*ALSASAFRLSSCSL Trigger: GAGAGAGCAGGAGGACAGGCGGAAGGCAGAAGCCGAGAGAGCTCAGCGGATGGCCAAAGAAAGACAGGAGCAGGAGGAGGCGCGCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 90 bp | CTGGACACCGAACTTGCCTCCGAAGCCCCGGACCGAGTCCACTTGTaGGCAGTGCTTGGAAAGCTTCGACTGGTACTCATGGCCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDTELASEAPDRVHL*AVLGKLRLVLMAHG Trigger: GCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTTCGGTGTCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | GCACTGTCTCCATCCTGGGAACCTGACTACAATGGGGATGGGGGTGGGCACAAGGGGGGCGTCTGCTTCTaGGCTCTGGCTTGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSPSWEPDYNGDGGGHKGGVCF*ALACSS Trigger: GGAAGAGCAAGCCAGAGCCAAGAAGCAGACGCCCCC...CTTGTGCCCACCCCCATCCCCATTGTAGTCAGGTTCCCAGGATGGAGACAGTGC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 90 bp | CCGAACTTGCCTCCGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTaGTTGGAAAGCTTCGACTGGTACTCATGGCCCACGGCTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNLPPKPRTESTCEQ*LESFDWYSWPTADL Trigger: CAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 90 bp | AGCCTACAGCAGACTGATCCACCCTGTCCATCTGGACACCGAACTTaGCTCCGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SLQQTDPPCPSGHRT*LRSPGPSPLVSSAW Trigger: CCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTTCGGTGTCCAGATGGACAGGGTGGATCAGTCTGCTGTAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CTCAAGGAAGCCATGGAGGCACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTGTATAGGTCAGGCCTaGCTGGCTGCCAGCCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LKEAMEAPRWEHQFTRSCCIGQA*LAASLR Trigger: CCTGAGGCTGGCAGCCAGCAAGGCCTGACCTATACA...ACAGGACCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCATGGCTTCCTTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 90 bp | CCCCGGACCGAGTCCACTTGTGAGCAGTGCTTGGAAAGCTTCGACTaGTACTCATGGCCCACGGCTGATCTGTCCATCCTATCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRTESTCEQCLESFD*YSWPTADLSILSCS Trigger: GGAGCAGGATAGGATGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 90 bp | ACTTGCCTCCGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTGCTTaGAAAGCTTCGACTGGTACTCATGGCCCACGGCTGATCTGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TCLRSPGPSPLVSSA*KASTGTHGPRLICP Trigger: TGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTAATCTGGACACCGAACTaGCCTCCGAAGCCCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: HPGGSISSLGPVFSHINLIWTPN*PPKPRT Trigger: GGTCCGGGGCTTCGGAGGCAAGTTCGGTGTCCAGAT...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | GCTTGCAGGAAGAAGCTATCTATCTCCCTGCCCAGCCAAGTGGCTGGGCACACAGTCTACACGGTCAGCTaGCACACCGTATTTGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: ACRKKLSISLPSQVAGHTVYTVS*HTVFAT Trigger: GGTGGCAAATACGGTGTGCAAGCTGACCGTGTAGAC...TGTGTGCCCAGCCACTTGGCTGGGCAGGGAGATAGATAGCTTCTTCCTGCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | ACCCAACCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAGGGGGCGTCTGCTTCTaGGCTCTGGCTTGCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TQPNNGKARILQESTRGEGGVCF*ALACSS Trigger: GGAAGAGCAAGCCAGAGCCAAGAAGCAGACGCCCCC...TTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 90 bp | TCTCATCATCGCCAGCAGCCTGGTAGTCATACAGGGCGATGGCTGTaGTGCCCAGGTCACTCTCATACCCATCGTAGGTGTCATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHHRQQPGSHTGRWL*CPGHSHTHRRCHPL Trigger: CAGAGGATGACACCTACGATGGGTATGAGAGTGACCTGGGCATCACAGCCATCGCCCTGTATGACTACCAGGCTGCTGGCGATGATGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 90 bp | TGTGATGCCCAGGTCACTCTCATACCCATCGTAGGTGTCATCCTCTaGTTGATAGTGGCCAGGAGCCTCTGTAGTCTCGTACACGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CDAQVTLIPIVGVIL*LIVARSLCSLVHGL Trigger: GAGCCCGTGTACGAGACTACAGAGGCTCCTGGCCACTATCAAGCAGAGGATGACACCTACGATGGGTATGAGAGTGACCTGGGCATCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 90 bp | GAGTCCACTTGTGAGCAGTGCTTGGAAAGCTTCGACTGGTACTCATaGCCCACGGCTGATCTGTCCATCCTATCCTGCTCCACACCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ESTCEQCLESFDWYS*PTADLSILSCSTPN Trigger: GTTCGGTGTGGAGCAGGATAGGATGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CTCAAGGAAGCCATGGAGGCACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTAAGGTGGATGCATTCTaGTCCATCCGATCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKEAMEAPRWEHQFTRSCKVDAF*SIRSFC Trigger: GCAGAAGGATCGGATGGACAAGAATGCATCCACCTT...ACAGGACCGAGTGAACTGATGCTCCCACCTGGGTGCCTCCATGGCTTCCTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CCAAACACTGGACCCCAGAGAGCCTCCTCACTGAGTGGCCACCCCAGGAGCACTTTATCCACCTTGTCCTaGTCAATCCCATATTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PNTGPQRASSLSGHPRSTLSTLS*SIPYLP Trigger: TGGCAAATATGGGATTGACAAGGACAAGGTGGATAA...AGTGCTCCTGGGGTGGCCACTCAGTGAGGAGGCTCTCTGGGGTCCAGTGTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | GCACTGTCTCCATCCTGGGAACCTGACTACAATGGGGATGGGGGTGGGCACAAGCGGATATTACTGGTTTaGCTGGTTACGGCCTCAATG | + |
|
Preference number: 5 (lower is better) Translates to: ALSPSWEPDYNGDGGGHKRILLV*LVTASM Trigger: CATTGAGGCCGTAACCAGCAAAACCAGTAATATCCG...CTTGTGCCCACCCCCATCCCCATTGTAGTCAGGTTCCCAGGATGGAGACAGTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 90 bp | CATAGCCGTGGGAAGCCTTGGGTCCCGTTTCCAGCTCCTTCTCCTTaGGCGTCTGGTGTTCTTGGAAGACATTCTCTCGAAGCTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: HSRGKPWVPFPAPSP*ASGVLGRHSLEACE Trigger: TTCACAAGCTTCGAGAGAATGTCTTCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGGAAACGGGACCCAAGGCTTCCCACGGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 90 bp | CTTCTGATAGGCAGATGGCACCTGGACCACTTCTTCAAAGGTGGATaGATTCTTGTCCATCCGATCCTTCTGCACCCCATACTTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLIGRWHLDHFFKGG*ILVHPILLHPILPA Trigger: GGCGGGAAGTATGGGGTGCAGAAGGATCGGATGGACAAGAATGCATCCACCTTTGAAGAAGTGGTCCAGGTGCCATCTGCCTATCAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | GTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGTCCTTTGGCATAGTCTaGCTGGGACTCGTGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VGASVHSVLFSATSIYQLSFGIV*LGLVLG Trigger: GCCAAGCACGAGTCCCAGCAAGACTATGCCAAAGGA...CAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS GCA 90 bp | ACCCCACAGCGGAGGAGTCCTGCCTCTCGGACTGAACACCAAATTTaGCTCCGAAACCAGTCTTATAGTCTTTTTGGGATTCATGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TPQRRSPASRTEHQI*LRNQSYSLFGIHAA Trigger: AGCTGCATGAATCCCAAAAAGACTATAAGACTGGTTTCGGAGGCAAATTTGGTGTTCAGTCCGAGAGGCAGGACTCCTCCGCTGTGGGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS CCA 90 bp | CAGTCTTCTGATAGGCAGATGGCACCTGGACCACTTCTTCAAAGGTaGATGCATTCTTGTCCATCCGATCCTTCTGCACCCCATACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSSDRQMAPGPLLQR*MHSCPSDPSAPHTS Trigger: GGAAGTATGGGGTGCAGAAGGATCGGATGGACAAGAATGCATCCACCTTTGAAGAAGTGGTCCAGGTGCCATCTGCCTATCAGAAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | AGAACACAGCGTGCTTCTGGAAGCTTGCAGGAAGAAGCTATCTATCTCCCTGCCACTTGTGAGCAGTGCTaGGAAAGCTTCGACTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: RTQRASGSLQEEAIYLPATCEQC*ESFDWY Trigger: GTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGT...GGCAGGGAGATAGATAGCTTCTTCCTGCAAGCTTCCAGAAGCACGCTGTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CACCCAGGTGGGAGCATCAGTTCACTCGGTCCTGTTTTCAGCCACATCAATCTAAAGGTGGATGCATTCTaGTCCATCCGATCCTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: HPGGSISSLGPVFSHINLKVDAF*SIRSFC Trigger: GCAGAAGGATCGGATGGACAAGAATGCATCCACCTT...TAGATTGATGTGGCTGAAAACAGGACCGAGTGAACTGATGCTCCCACCTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGACTATAACTGAACATTGTATAGGTCAGGCCTaGCTGGCTGCCAGCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: HSVLFSATSIYQLTITEHCIGQA*LAASLR Trigger: CCTGAGGCTGGCAGCCAGCAAGGCCTGACCTATACA...ATGTTCAGTTATAGTCAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAAACGGGTTATCCACCTTGTCCTaGTCAATCCCATATTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: PNNGKARILQESTRGENGLSTLS*SIPYLP Trigger: TGGCAAATATGGGATTGACAAGGACAAGGTGGATAA...CCCGTTTTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | ACCCAACCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAATTGTCAATCCCATATTaGCCACCAAAACCTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TQPNNGKARILQESTRGELSIPY*PPKPLE Trigger: CTCCAAAGGTTTTGGTGGCAAATATGGGATTGACAA...TTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CTTAAGTGGTCAGGACTGACAGATAGGACTTCCCTCAGTGTCAACGCTCTAGGATTTGGCATAGTCTTTTaGGGATTCATGCAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: LKWSGLTDRTSLSVNALGFGIVF*GFMQLQ Trigger: CTGCAGCTGCATGAATCCCAAAAAGACTATGCCAAA...TCCTAGAGCGTTGACACTGAGGGAAGTCCTATCTGTCAGTCCTGACCACTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033407.13 |
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| CDS-3UTR CAA 90 bp | ACCCAACCTAACAACGGAAAGGCAAGGATTCTGCAGGAAAGCACACGGGGAGAAAGTCTTATAGTCTTTTaGGGATTCATGCAGCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: TQPNNGKARILQESTRGESLIVF*GFMQLQ Trigger: CTGCAGCTGCATGAATCCCAAAAAGACTATAAGACT...TTCTCCCCGTGTGCTTTCCTGCAGAATCCTTGCCTTTCCGTTGTTAGGTTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | CACTCGGTCCTGTTTTCAGCCACATCAATCTATCAGCTGACTATAACTGAACATACTTGTGAGCAGTGCTaGGAAAGCTTCGACTGGTAC | + |
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Preference number: 5 (lower is better) Translates to: HSVLFSATSIYQLTITEHTCEQC*ESFDWY Trigger: GTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGT...ATGTTCAGTTATAGTCAGCTGATAGATTGATGTGGCTGAAAACAGGACCGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | TGTGAACATGATCATCAGACATTAGCAAATCCTGTGGCAGGACATGCCCCGAAGTTGTCAATCCCATATTaGCCACCAAAACCTTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CEHDHQTLANPVAGHAPKLSIPY*PPKPLE Trigger: CTCCAAAGGTTTTGGTGGCAAATATGGGATTGACAA...CTTCGGGGCATGTCCTGCCACAGGATTTGCTAATGTCTGATGATCATGTTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 90 bp | AGCCCACAGCACTTTTATCCACCTTGTCCTTGTCAATCCCATATTTaGCACCAAAACCTTTGGAGTAATCTTTCTGAGACTCATGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SPQHFYPPCPCQSHI*HQNLWSNLSETHAS Trigger: AGAAGCATGAGTCTCAGAAAGATTACTCCAAAGGTTTTGGTGGCAAATATGGGATTGACAAGGACAAGGTGGATAAAAGTGCTGTGGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | AAAACAGAAACGGAAGCAGAAACCAACTCAAACACACGCAGATGCTCTGTAGTGGCACTTTTATCCACCTaGTCCTTGTCAATCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: KTETEAETNSNTRRCSVVALLST*SLSIPY Trigger: ATATGGGATTGACAAGGACAAGGTGGATAAAAGTGC...CACTACAGAGCATCTGCGTGTGTTTGAGTTGGTTTCTGCTTCCGTTTCTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS-3UTR CAA 90 bp | TATGAGGTGTGCTACAGAATTCCAGATGATAATTCATATAGAAAACCCAACCTAGCACTTTTATCCACCTaGTCCTTGTCAATCCCATAT | + |
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Preference number: 5 (lower is better) Translates to: YEVCYRIPDDNSYRKPNLALLST*SLSIPY Trigger: ATATGGGATTGACAAGGACAAGGTGGATAAAAGTGC...TAGGTTGGGTTTTCTATATGAATTATCATCTGGAATTCTGTAGCACACCTCATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 72 bp | CCTCCGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTaGTTGGAAAGCTTCGACTGGTACTCATGGCCCACG | + |
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Preference number: 6 (lower is better) Translates to: PPKPRTESTCEQ*LESFDWYSWPT Trigger: CGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 72 bp | CAGACTGATCCACCCTGTCCATCTGGACACCGAACTTaGCTCCGAAGCCCCGGACCGAGTCCACTTGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: QTDPPCPSGHRT*LRSPGPSPLVS Trigger: GCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTTCGGTGTCCAGATGGACAGGGTGGATCAGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | CGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTGCTTaGAAAGCTTCGACTGGTACTCATGGCCCACGGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSPGPSPLVSSA*KASTGTHGPRL Trigger: CAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CAA 72 bp | CCGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTGCTaGGAAAGCTTCGACTGGTACTCATGGCCCACGGCT | + |
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Preference number: 6 (lower is better) Translates to: PKPRTESTCEQC*ESFDWYSWPTA Trigger: AGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 72 bp | TATAGGTCAGGCCTTGCTGGCTGCCAGCCTCAGGAATaGCTGCGGCCTCGATGCTGTACTCAGGCTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: YRSGLAGCQPQE*LRPRCCTQAQV Trigger: AACCTGAGCCTGAGTACAGCATCGAGGCCGCAGGCATTCCTGAGGCTGGCAGCCAGCAAGGCCTGACCTATA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CAA 90 bp | AACTTGCCTCCGAAGCCCCGGACCGAGTCCACTTGTGAGCAGTGCTaGGAAAGCTTCGACTGGTACTCATGGCCCACGGCTGATCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: NLPPKPRTESTCEQC*ESFDWYSWPTADLS Trigger: GGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 72 bp | CGCCAGCAGCCTGGTAGTCATACAGGGCGATGGCTGTaGTGCCCAGGTCACTCTCATACCCATCGTAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: RQQPGSHTGRWL*CPGHSHTHRRC Trigger: ACACCTACGATGGGTATGAGAGTGACCTGGGCATCACAGCCATCGCCCTGTATGACTACCAGGCTGCTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 72 bp | GGGTGGTCTGTCTTCAATTGGTTGAGGACTAGGGGATaGAGGGGGCGTCTGCTTCTTGGCTCTGGCTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: GWSVFNWLRTRG*RGRLLLGSGLL Trigger: GAGCAAGCCAGAGCCAAGAAGCAGACGCCCCCTGCATCCCCTAGTCCTCAACCAATTGAAGACAGACCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 72 bp | GAACTTGCCTCCGAAGCCCCGGACCGAGTCCACTTGTaGGCAGTGCTTGGAAAGCTTCGACTGGTACTCATG | + |
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Preference number: 6 (lower is better) Translates to: ELASEAPDRVHL*AVLGKLRLVLM Trigger: CATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTCGGTCCGGGGCTTCGGAGGCAAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 72 bp | CCACATAGTTGGCTGGGAAGAGCCCGTATCTGCCCTTaGACACCCCACGCCACCAGCCATCGTCAATCATTT | + |
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Preference number: 6 (lower is better) Translates to: PHSWLGRARICP*TPHATSHRQSF Trigger: AAATGATTGACGATGGCTGGTGGCGTGGGGTGTGCAAGGGCAGATACGGGCTCTTCCCAGCCAACTATGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | TGTGAGCAGTGCTTGGAAAGCTTCGACTGGTACTCATaGCCCACGGCTGATCTGTCCATCCTATCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CEQCLESFDWYS*PTADLSILSCS Trigger: GGAGCAGGATAGGATGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | GATCCTTCTGCACCCCATACTTCCCGCCGAATCCTTTaGCATAGTCTTGCTGGGACTCGTGCTTGGCCAATC | + |
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Preference number: 6 (lower is better) Translates to: DPSAPHTSRRIL*HSLAGTRAWPI Trigger: GATTGGCCAAGCACGAGTCCCAGCAAGACTATGCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS TCA 72 bp | GGGAAGCCTTGGGTCCCGTTTCCAGCTCCTTCTCCTTaGGCGTCTGGTGTTCTTGGAAGACATTCTCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: GKPWVPFPAPSP*ASGVLGRHSLE Trigger: TTCGAGAGAATGTCTTCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGGAAACGGGACCCAAGGCTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 72 bp | CTTGGAAAGCTTCGACTGGTACTCATGGCCCACGGCTaGTCTGTCCATCCTATCCTGCTCCACACCGAACTT | + |
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Preference number: 6 (lower is better) Translates to: LGKLRLVLMAHG*SVHPILLHTEL Trigger: AAGTTCGGTGTGGAGCAGGATAGGATGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | GAGTCCACTTGTGAGCAGTGCTTGGAAAGCTTCGACTaGTACTCATGGCCCACGGCTGATCTGTCCATCCTA | + |
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Preference number: 6 (lower is better) Translates to: ESTCEQCLESFD*YSWPTADLSIL Trigger: TAGGATGGACAGATCAGCCGTGGGCCATGAGTACCAGTCGAAGCTTTCCAAGCACTGCTCACAAGTGGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CAA 72 bp | TGGGAAGCCTTGGGTCCCGTTTCCAGCTCCTTCTCCTaGAGCGTCTGGTGTTCTTGGAAGACATTCTCTCGA | + |
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Preference number: 6 (lower is better) Translates to: WEALGPVSSSFS*SVWCSWKTFSR Trigger: TCGAGAGAATGTCTTCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGGAAACGGGACCCAAGGCTTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS GCA 72 bp | GGCAGATGGCACCTGGACCACTTCTTCAAAGGTGGATaGATTCTTGTCCATCCGATCCTTCTGCACCCCATA | + |
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Preference number: 6 (lower is better) Translates to: GRWHLDHFFKGG*ILVHPILLHPI Trigger: TATGGGGTGCAGAAGGATCGGATGGACAAGAATGCATCCACCTTTGAAGAAGTGGTCCAGGTGCCATCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | GATAGGCAGATGGCACCTGGACCACTTCTTCAAAGGTaGATGCATTCTTGTCCATCCGATCCTTCTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: DRQMAPGPLLQR*MHSCPSDPSAP Trigger: GGGTGCAGAAGGATCGGATGGACAAGAATGCATCCACCTTTGAAGAAGTGGTCCAGGTGCCATCTGCCTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | CGAATCCTTTGGCATAGTCTTGCTGGGACTCGTGCTTaGCCAATCTCTCCTTGTAATCAAACCCCACAGCGG | + |
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Preference number: 6 (lower is better) Translates to: RILWHSLAGTRA*PISPCNQTPQR Trigger: CCGCTGTGGGGTTTGATTACAAGGAGAGATTGGCCAAGCACGAGTCCCAGCAAGACTATGCCAAAGGATTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103079.4 |
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| CDS CCA 72 bp | GATCCTTCTGCACCCCATACTTCCCGCCGAATCCTTTaGCATAGTCTTTTTGGGATTCATGCAGCTGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: DPSAPHTSRRIL*HSLFGIHAAAA Trigger: AGCTGCAGCTGCATGAATCCCAAAAAGACTATGCCAAAGGATTCGGCGGGAAGTATGGGGTGCAGAAGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033407.13 |
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| CDS CCA 72 bp | TACGGCCTCAATGGGGACAGTCTTCTGATAGGCAGATaGCACCTGGACCACTTCTTCAAAGGTGGATGCATT | + |
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Preference number: 6 (lower is better) Translates to: YGLNGDSLLIGR*HLDHFFKGGCI Trigger: AATGCATCCACCTTTGAAGAAGTGGTCCAGGTGCCATCTGCCTATCAGAAGACTGTCCCCATTGAGGCCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CCA 72 bp | CACGGATATTACTGGTTTTGCTGGTTACGGCCTCAATaGGGACAGTCTTCTGATAGGCAGATGGCACCTGGA | + |
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Preference number: 6 (lower is better) Translates to: HGYYWFCWLRPQ*GQSSDRQMAPG Trigger: TCCAGGTGCCATCTGCCTATCAGAAGACTGTCCCCATTGAGGCCGTAACCAGCAAAACCAGTAATATCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CAA 90 bp | CTTGGGTCCCGTTTCCAGCTCCTTCTCCTTGAGCGTCTGGTGTTCTaGGAAGACATTCTCTCGAAGCTTGTGAATGTTGATGTGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGSRFQLLLLERLVF*EDILSKLVNVDVFL Trigger: CAGGAACACATCAACATTCACAAGCTTCGAGAGAATGTCTTCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGGAAACGGGACCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS TCA 72 bp | GTTCTTGGAAGACATTCTCTCGAAGCTTGTGAATGTTaGTGTGTTCCTGGTGCCCCGATCCCTGCACGGTTT | + |
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Preference number: 6 (lower is better) Translates to: VLGRHSLEACEC*CVPGAPIPARF Trigger: AAACCGTGCAGGGATCGGGGCACCAGGAACACATCAACATTCACAAGCTTCGAGAGAATGTCTTCCAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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| CDS CAA 72 bp | CGTTTCCAGCTCCTTCTCCTTGAGCGTCTGGTGTTCTaGGAAGACATTCTCTCGAAGCTTGTGAATGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: RFQLLLLERLVF*EDILSKLVNVD Trigger: ATCAACATTCACAAGCTTCGAGAGAATGTCTTCCAAGAACACCAGACGCTCAAGGAGAAGGAGCTGGAAACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033407.13 ENSMUST00000103079.4 |
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