Pregenerated sensors for CTSW (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024910Ensembl transcript IDs: ENSMUST00000025844.6, ENSMUST00000236256.2
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTaGCAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGTGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: AVLVYEAIQRGCGQG*QGAVAMWEKQKSGC Trigger: GCAGCCACTCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | ATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTCCCTTCTCGCCCCAGTaGGCTCCCCAGGAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: MKPYREDVGRADKGQWPCPFSPQ*APQEFF Trigger: GAAGAACTCCTGGGGAGCTCACTGGGGCGAGAAGGG...ACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCACAGAGTGGTCCACTTaGCGAGGGTCACAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: YREDVGRADKGQWPCGRSTEWST*RGSQEL Trigger: CAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGT...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAACAAACTGCTGGTGTTTaGTGCGCCACAGAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ERMWAGLTRGSGHVGEAEQTAGV*CATEPG Trigger: TCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTG...TTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCTCCAGTAACTCCGGTTaGACCGGATCTGGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: YREDVGRADKGQWPCGRSSSNSG*TGSGTA Trigger: AGCTGTTCCAGATCCGGTTCAACCGGAGTTACTGGA...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | AGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGATCTGGTGACCTCTCCTaGCCGTATAACTGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: SHTERMWAGLTRGSGHVGSGDLS*PYNWPN Trigger: GTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGA...TCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | CATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGATGTTGTCGGCAGCTaGCATGGCCCAGCAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: HTERMWAGLTRGSGHVGEDVVGS*HGPAAF Trigger: AAATGCTGCTGGGCCATGGCAGCTGCCGACAACATC...TTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTACAGAGTGGTCCACTTaGCGAGGGTCACAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MKPYREDVGRADKGQWPCTEWST*RGSQEL Trigger: CAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGT...ACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | GAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGATGCCCTCTTTCTCCTTaGCAAAGCCCACCAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: EDVGRADKGQWPCGRSRRCPLSP*QSPPAR Trigger: TCTTGCTGGTGGGCTTTGGCAAGGAGAAAGAGGGCA...TCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | AGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGTGCCCTCTTTCTCCTTaGCAAAGCCCACCAGCAAGA | + |
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Preference number: 4 (lower is better) Translates to: RMWAGLTRGSGHVGEAEECPLSP*QSPPAR Trigger: TCTTGCTGGTGGGCTTTGGCAAGGAGAAAGAGGGCA...CTCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | GAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGACTTCAGGATCCAGTATaGGGAGGAGTGGCGACGTTT | + |
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Preference number: 4 (lower is better) Translates to: EDVGRADKGQWPCGRSRRLQDPV*GGVATF Trigger: AAACGTCGCCACTCCTCCCCATACTGGATCCTGAAG...TCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | AGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGGATCTGGAACAGCTTaGAGACTTCCTTCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: SHTERMWAGLTRGSGHVGGSGTA*RLPSAP Trigger: TGGAGCTGAAGGAAGTCTTCAAGCTGTTCCAGATCC...TCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | CCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGACCAGGCCACTGTTGTTaGGGACAGTTAGATATGCGT | + |
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Preference number: 4 (lower is better) Translates to: PYREDVGRADKGQWPCGRPGHCC*GQLDMR Trigger: ACGCATATCTAACTGTCCTCAACAACAGTGGCCTGG...TCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | GAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGCCCTTCTCGCCCCAGTaGGCTCCCCAGGAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: EQSWFMKPYREDVGRADKPFSPQ*APQEFF Trigger: GAAGAACTCCTGGGGAGCTCACTGGGGCGAGAAGGG...CTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCACTGGTGAGTCCACTTaGGCTGTGAAGGGATACTTG | + |
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Preference number: 4 (lower is better) Translates to: YREDVGRADKGQWPCGRSTGEST*AVKGYL Trigger: CAAGTATCCCTTCACAGCTCAAGTGGACTCACCAGT...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | AAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGACTGGTGAGTCCACTTaGGCTGTGAAGGGATACTTG | + |
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Preference number: 4 (lower is better) Translates to: KPYREDVGRADKGQWPCGTGEST*AVKGYL Trigger: CAAGTATCCCTTCACAGCTCAAGTGGACTCACCAGT...CCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | ACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAAAGACTGTCCCTGTCTaGATGCCCTCTTTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: TERMWAGLTRGSGHVGEAKTVPV*MPSFSL Trigger: CAAGGAGAAAGAGGGCATGCAGACAGGGACAGTCTT...TGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCCGGTTGAACCGGATCTaGAACAGCTTGAAGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: YREDVGRADKGQWPCGRSRLNRI*NSLKTS Trigger: GGAAGTCTTCAAGCTGTTCCAGATCCGGTTCAACCG...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | CCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGACGGTTGAACCGGATCTaGAACAGCTTGAAGACTTCC | + |
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Preference number: 4 (lower is better) Translates to: PYREDVGRADKGQWPCGRRLNRI*NSLKTS Trigger: GGAAGTCTTCAAGCTGTTCCAGATCCGGTTCAACCG...TCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGTGTCGGCAGCTGCCATaGCCCAGCAGCATTTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: QSWFMKPYREDVGRADKGCRQLP*PSSICS Trigger: GCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACA...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | CATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAACCAGGCCACTGTTGTTaGGGACAGTTAGATATGCGT | + |
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Preference number: 4 (lower is better) Translates to: HTERMWAGLTRGSGHVGEPGHCC*GQLDMR Trigger: ACGCATATCTAACTGTCCTCAACAACAGTGGCCTGG...TTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | GAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAATATTGGACAACATGGTaGAATCCTGGATCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: ERMWAGLTRGSGHVGEAEYWTTW*NPGSRP Trigger: TGGCCTGGATCCAGGATTTCACCATGTTGTCCAATA...TTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | CCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGATGTGAGGTCACTGAATaGAGTCTCTCCAAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PYREDVGRADKGQWPCGRCEVTE*SLSKLS Trigger: GCTGAGTTTGGAGAGACTCCATTCAGTGACCTCACA...TCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCTGTGAGGTCACTGAATaGAGTCTCTCCAAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: YREDVGRADKGQWPCGRSCEVTE*SLSKLS Trigger: GCTGAGTTTGGAGAGACTCCATTCAGTGACCTCACA...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | GAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAATCTGTCCCCCTGGAATaGATAATCCTTTTCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: ERMWAGLTRGSGHVGEAESVPLE*IILFTG Trigger: GCCAGTGAAAAGGATTATCCATTCCAGGGGGACAGA...TTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGATGCAGCTTCCCTTTTTaGTCATGTTGGGGGTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: REDVGRADKGQWPCGRSRCSFPF*SCWGSF Trigger: AAAGGACCCCCAACATGACCAAAAAGGGAAGCTGCA...TCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGGATGTTGTCGGCAGCTaGCATGGCCCAGCAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: QSWFMKPYREDVGRADKGDVVGS*HGPAAF Trigger: AAATGCTGCTGGGCCATGGCAGCTGCCGACAACATC...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGTCCAGTAACTCCGGTTaGACCGGATCTGGAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: QSWFMKPYREDVGRADKGSSNSG*TGSGTA Trigger: AGCTGTTCCAGATCCGGTTCAACCGGAGTTACTGGA...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR TCA 90 bp | GAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGCAAACTGCTGGTGTTTaGTGCGCCACAGAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: EQSWFMKPYREDVGRADKQTAGV*CATEPG Trigger: TCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTG...CTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | ACGGAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACTCTGGTGACCTCTCCTaGCCGTATAACTGGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: TEQSWFMKPYREDVGRADSGDLS*PYNWPN Trigger: GTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGA...GTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR CCA 90 bp | ATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTTCTGTCCCCCTGGAATaGATAATCCTTTTCACTGGC | + |
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Preference number: 4 (lower is better) Translates to: MKPYREDVGRADKGQWPCSVPLE*IILFTG Trigger: GCCAGTGAAAAGGATTATCCATTCCAGGGGGACAGA...ACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | ACGGAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACCTTCAGGATCCAGTATaGGGAGGAGTGGCGACGTTT | + |
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Preference number: 4 (lower is better) Translates to: TEQSWFMKPYREDVGRADLQDPV*GGVATF Trigger: AAACGTCGCCACTCCTCCCCATACTGGATCCTGAAG...GTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR TCA 90 bp | TGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGTATTGGACAACATGGTaGAATCCTGGATCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WFMKPYREDVGRADKGQWYWTTW*NPGSRP Trigger: TGGCCTGGATCCAGGATTTCACCATGTTGTCCAATA...CCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | TCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGAAGACTGTCCCTGTCTaGATGCCCTCTTTCTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: SWFMKPYREDVGRADKGQKTVPV*MPSFSL Trigger: CAAGGAGAAAGAGGGCATGCAGACAGGGACAGTCTT...CTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGTGGCCCAGCAGCATTTaGAGCTTCCCTTTTTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QSWFMKPYREDVGRADKGWPSSI*SFPFWS Trigger: TGACCAAAAAGGGAAGCTGCAAATGCTGCTGGGCCA...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGACACGAAGCCACCATTaGAACCATTTCCACAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: QSWFMKPYREDVGRADKGTRSHH*NHFHSV Trigger: AACGCTGTGGAAATGGTTGCAATGGTGGCTTCGTGT...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CCA 90 bp | ACGGAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAACATGGTGAAATCCTaGATCCAGGCCACCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: TEQSWFMKPYREDVGRADNMVKS*IQATFL Trigger: CAAGAAGGTGGCCTGGATCCAGGATTTCACCATGTT...GTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR CCA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGAACATGGTGAAATCCTaGATCCAGGCCACCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: QSWFMKPYREDVGRADKGNMVKS*IQATFL Trigger: CAAGAAGGTGGCCTGGATCCAGGATTTCACCATGTT...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | AGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGACGGGGACCTGCATCCTaGGTGAGGAGGGAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: REDVGRADKGQWPCGRSRRGPAS*VRRESL Trigger: CAGTGACTCCCTCCTCACCAAGGATGCAGGTCCCCG...TCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCCACAGAGCCTGGATGTaGTCGGCAGCTGCCATGGCC | + |
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Preference number: 5 (lower is better) Translates to: YREDVGRADKGQWPCGRSHRAWM*SAAAMA Trigger: GGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTG...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | GAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGACAGAGTGGTCCACTaGCCGAGGGTCACAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: EDVGRADKGQWPCGRSRRDRVVH*PRVTGA Trigger: AGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTC...TCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | ATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGTGGGACAGAGTGGTCCACTaGCCGAGGGTCACAGGAGCT | + |
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Preference number: 5 (lower is better) Translates to: MWAGLTRGSGHVGEAEEWDRVVH*PRVTGA Trigger: AGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTC...CCACTCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS TCA 90 bp | AGTCCAGCAGCTCCTGCACAGAGACGTCCACAAACTGCTGGTGTTTaGTGCGCCACAGAGCCTGGATGTTGTCGGCAGCTGCCATGGCCC | + |
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Preference number: 5 (lower is better) Translates to: SPAAPAQRRPQTAGV*CATEPGCCRQLPWP Trigger: GGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCTGCTGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 90 bp | CGTTCGCAGTCCAGCAGCTCCTGCACAGAGACGTCCACAAACTGCTaGTGTTTGATGCGCCACAGAGCCTGGATGTTGTCGGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSQSSSSCTETSTNC*CLMRHRAWMLSAAA Trigger: GGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCTGCTGGACTGCGAACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS GCA 90 bp | CTGCTGGTGTTTGATGCGCCACAGAGCCTGGATGTTGTCGGCAGCTaGCATGGCCCAGCAGCATTTGCAGCTTCCCTGGTTCTTGACCGA | + |
|
Preference number: 5 (lower is better) Translates to: LLVFDAPQSLDVVGS*HGPAAFAASLVLDR Trigger: TCGGTCAAGAACCAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
||
| CDS GCA 90 bp | CAGCGTTCGCAGTCCAGCAGCTCCTGCACAGAGACGTCCACAAACTaGTGGTGTTTGATGCGCCACAGAGCCTGGATGTTGTCGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QRSQSSSSCTETSTN*WCLMRHRAWMLSAA Trigger: AGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCTGCTGGACTGCGAACGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAACAAACTGCTGGTGTTaGATGCGCCACAGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: TERMWAGLTRGSGHVGEATNCWC*MRHRAW Trigger: CCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGT...TGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | CCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAACAAACTGCTGGTGTTaGATGCGCCACAGAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PYREDVGRADKGQWPCGRTNCWC*MRHRAW Trigger: CCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGT...TCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGTGGATGCCCTCTTTCTCCTaGCCAAAGCCCACCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MWAGLTRGSGHVGEAEEWMPSFS*PKPTSK Trigger: CTTGCTGGTGGGCTTTGGCAAGGAGAAAGAGGGCAT...CCACTCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCGGGGACCTGCATCCTaGGTGAGGAGGGAGTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: QSWFMKPYREDVGRADKGRGPAS*VRRESL Trigger: CAGTGACTCCCTCCTCACCAAGGATGCAGGTCCCCG...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | ATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGTGGCACACGAAGCCACCATaGCAACCATTTCCACAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: MWAGLTRGSGHVGEAEEWHTKPP*QPFPQR Trigger: ACGCTGTGGAAATGGTTGCAATGGTGGCTTCGTGTG...CCACTCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS GCA 90 bp | TCTTTCTCCTTGCCAAAGCCCACCAGCAAGACAGAGTGGTCCACTTaGCGAGGGTCACAGGAGCTGGGTGTAGCCTTGATGACACCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSLPKPTSKTEWST*RGSQELGVALMTPF Trigger: GAAGGGTGTCATCAAGGCTACACCCAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTCTTGCTGGTGGGCTTTGGCAAGGAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CCA 90 bp | ACAGAGACGTCCACAAACTGCTGGTGTTTGATGCGCCACAGAGCCTaGATGTTGTCGGCAGCTGCCATGGCCCAGCAGCATTTGCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TETSTNCWCLMRHRA*MLSAAAMAQQHLQL Trigger: AAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CCA 90 bp | TGTCGGCAGCTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTTTTTaGTCATGTTGGGGGTCCTTTCTGGTGACCTCTCCTGCCCGTATA | + |
|
Preference number: 5 (lower is better) Translates to: CRQLPWPSSICSFPF*SCWGSFLVTSPARI Trigger: TATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGACCAAAAAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAATCCAGGCCACCTTCTaGTACTTCTTGGCTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: REDVGRADKGQWPCGRSRIQATF*YFLARH Trigger: ATGCCTAGCCAAGAAGTACAAGAAGGTGGCCTGGAT...TCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | GAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAATCCAGGCCACCTTCTaGTACTTCTTGGCTAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EDVGRADKGQWPCGRSRRIQATF*YFLARH Trigger: ATGCCTAGCCAAGAAGTACAAGAAGGTGGCCTGGAT...TCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | AAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGCCAGGTAGTGGGCAATaGCCTGCTCATTATTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KPYREDVGRADKGQWPCGPGSGQ*PAHYWT Trigger: TGTCCAATAATGAGCAGGCAATTGCCCACTACCTGG...CCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS-3UTR CAA 90 bp | AGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGACCAGGTAGTGGGCAATaGCCTGCTCATTATTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: REDVGRADKGQWPCGRSRPGSGQ*PAHYWT Trigger: TGTCCAATAATGAGCAGGCAATTGCCCACTACCTGG...TCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 90 bp | CCACCATTGCAACCATTTCCACAGCGTTCGCAGTCCAGCAGCTCCTaGACAGAGACGTCCACAAACTGCTGGTGTTTGATGCGCCACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PPLQPFPQRSQSSSS*TETSTNCWCLMRHR Trigger: TCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCTGCTGGACTGCGAACGCTGTGGAAATGGTTGCAATGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS GCA 90 bp | CTGCTGGTGTTTGATGCGCCACAGAGCCTGGATGTTGTCGGCAGCTaGCATGGCCCAGCAGCATTTGCAGCTTCCCTTTTTGGTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVFDAPQSLDVVGS*HGPAAFAASLFGHV Trigger: AACATGACCAAAAAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS CCA 90 bp | CTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTTTTTGGTCATGTTaGGGGTCCTTTCTGGTGACCTCTCCTGCCCGTATAACTGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LPWPSSICSFPFWSC*GSFLVTSPARITGQ Trigger: TTGGCCAGTTATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGACCAAAAAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | CATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAATTGCAGCTTCCCTTTTaGGTCATGTTGGGGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HTERMWAGLTRGSGHVGELQLPF*VMLGVL Trigger: AAGGACCCCCAACATGACCAAAAAGGGAAGCTGCAA...TTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS GCA 90 bp | CTTCTTGCTGTAGCCTTTGAGCCTGAGCCAGATTGTGGGCAAAGATaGTCAGACGGCGAGTGTACTCTGCTGGGTTCCAGTAACTCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LLAVAFEPEPDCGQR*SDGECTLLGSSNSG Trigger: ACCGGAGTTACTGGAACCCAGCAGAGTACACTCGCCGTCTGAGCATCTTTGCCCACAATCTGGCTCAGGCTCAAAGGCTACAGCAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CCA 90 bp | GTCATGTTGGGGGTCCTTTCTGGTGACCTCTCCTGCCCGTATAACTaGCCAAACTCCTCCTCTGTGAGGTCACTGAATGGAGTCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VMLGVLSGDLSCPYN*PNSSSVRSLNGVSP Trigger: TGGAGAGACTCCATTCAGTGACCTCACAGAGGAGGAGTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | ACGGAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACATGGCCCAGCAGCATTaGCAGCTTCCCTGGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TEQSWFMKPYREDVGRADMAQQH*QLPWFL Trigger: CAAGAACCAGGGAAGCTGCAAATGCTGCTGGGCCAT...GTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR CAA 90 bp | TACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCTGGAGTAGTTTCATGTaGATGGTCACGGTGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: YREDVGRADKGQWPCGRSWSSFM*MVTVIG Trigger: ACCTATCACCGTGACCATCAACATGAAACTACTCCA...GCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGATGCCCTCTTTCTCCTaGCCAAAGCCCACCAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSWFMKPYREDVGRADKGMPSFS*PKPTSK Trigger: CTTGCTGGTGGGCTTTGGCAAGGAGAAAGAGGGCAT...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 90 bp | ATGTTGTCGGCAGCTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTaGTTCTTGACCGACGAGATGATGTTCTTTGCTTTACGCCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLSAAAMAQQHLQLP*FLTDEMMFFALRQS Trigger: TGACTGGCGTAAAGCAAAGAACATCATCTCGTCGGTCAAGAACCAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR CAA 90 bp | GATGTGGGCAGGGCTGACAAGGGGCAGTGGCCATGTGGGAGAAGCAGAAGAGTGATTGCCTGCTCATTATaGGACAACATGGTGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: DVGRADKGQWPCGRSRRVIACSL*DNMVKS Trigger: GGATTTCACCATGTTGTCCAATAATGAGCAGGCAAT...CACTCTTCTGCTTCTCCCACATGGCCACTGCCCCTTGTCAGCCCTGCCCACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS TCA 90 bp | CGGCCAGGTAGTGGGCAATTGCCTGCTCATTATTGGACAACATGGTaGAATCCTGGATCCAGGCCACCTTCTTGTACTTCTTGGCTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RPGSGQLPAHYWTTW*NPGSRPPSCTSWLG Trigger: GCCTAGCCAAGAAGTACAAGAAGGTGGCCTGGATCCAGGATTTCACCATGTTGTCCAATAATGAGCAGGCAATTGCCCACTACCTGGCCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 90 bp | CTTCCCTTTTTGGTCATGTTGGGGGTCCTTTCTGGTGACCTCTCCTaGCCGTATAACTGGCCAAACTCCTCCTCTGTGAGGTCACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LPFLVMLGVLSGDLS*PYNWPNSSSVRSLN Trigger: ATTCAGTGACCTCACAGAGGAGGAGTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGACCAAAAAGGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | ACGGAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACCTGGCCAGGCCACTGTaGTTGAGGACAGTTAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: TEQSWFMKPYREDVGRADLARPL*LRTVRY Trigger: ATATCTAACTGTCCTCAACAACAGTGGCCTGGCCAG...GTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR CAA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCTGGCCAGGCCACTGTaGTTGAGGACAGTTAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: QSWFMKPYREDVGRADKGLARPL*LRTVRY Trigger: ATATCTAACTGTCCTCAACAACAGTGGCCTGGCCAG...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 90 bp | TCTACCTTTTTGGTCATGTTGGGGGTCCTTTCTGGTGACCTCTCCTaGCCGTATAACTGGCCAAACTCCTCCTCTGTGAGGTCACTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: STFLVMLGVLSGDLS*PYNWPNSSSVRSLN Trigger: ATTCAGTGACCTCACAGAGGAGGAGTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGACCAAAAAGGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS-3UTR CAA 90 bp | TTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGCAGTGGCCAATTGCCTGCTCATTATaGGACAACATGGTGAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: FMKPYREDVGRADKGQWPIACSL*DNMVKS Trigger: GGATTTCACCATGTTGTCCAATAATGAGCAGGCAAT...TGGCCACTGCCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | CAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGGGGTGGAGTAGTTTCATGTaGATGGTCACGGTGATAGGT | + |
|
Preference number: 5 (lower is better) Translates to: QSWFMKPYREDVGRADKGWSSFM*MVTVIG Trigger: ACCTATCACCGTGACCATCAACATGAAACTACTCCA...CCCCTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGTCTTGGTTTATGAAGCCATACAGAGAGGATGTGGGCAGGGCTGACAAGTTAGACTCTACCTTTTaGGTCATGTTGGGGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EQSWFMKPYREDVGRADKLDSTF*VMLGVL Trigger: AAGGACCCCCAACATGACCAAAAAGGTAGAGTCTAA...CTTGTCAGCCCTGCCCACATCCTCTCTGTATGGCTTCATAAACCAAGACTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS CAA 90 bp | CAGTCCAGCAGCTCCTGCACAGAGACGTCCACAAACTGCTGGTGTTaGATGCGCCACAGAGCCTGGATGTTGTCGGCAGCTGCCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QSSSSCTETSTNCWC*MRHRAWMLSAAAMA Trigger: GGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCTGCTGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 72 bp | CTTGAAGACTTCCTTCAGCTCCAGTGGCCGGGGACCTaGATCCTTGGTGAGGAGGGAGTCACTGAGGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LEDFLQLQWPGT*ILGEEGVTEAL Trigger: CAAGGCCTCAGTGACTCCCTCCTCACCAAGGATGCAGGTCCCCGGCCACTGGAGCTGAAGGAAGTCTTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CAA 90 bp | ACGTCCACAAACTGCTGGTGTTTGATGCGCCACAGAGCCTGGATGTaGTCGGCAGCTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSTNCWCLMRHRAWM*SAAAMAQQHLQLPW Trigger: CCAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
||
| CDS TCA 72 bp | GCTCCTGCACAGAGACGTCCACAAACTGCTGGTGTTTaGTGCGCCACAGAGCCTGGATGTTGTCGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: APAQRRPQTAGV*CATEPGCCRQL Trigger: CAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS GCA 72 bp | TTGCCAAAGCCCACCAGCAAGACAGAGTGGTCCACTTaGCGAGGGTCACAGGAGCTGGGTGTAGCCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: LPKPTSKTEWST*RGSQELGVALM Trigger: CATCAAGGCTACACCCAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTCTTGCTGGTGGGCTTTGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CCA 72 bp | TCCACAAACTGCTGGTGTTTGATGCGCCACAGAGCCTaGATGTTGTCGGCAGCTGCCATGGCCCAGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: STNCWCLMRHRA*MLSAAAMAQQH Trigger: ATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CAA 72 bp | AACTGCTGGTGTTTGATGCGCCACAGAGCCTGGATGTaGTCGGCAGCTGCCATGGCCCAGCAGCATTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: NCWCLMRHRAWM*SAAAMAQQHLQ Trigger: CTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CAA 72 bp | CTTGCCAAAGCCCACCAGCAAGACAGAGTGGTCCACTaGCCGAGGGTCACAGGAGCTGGGTGTAGCCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LAKAHQQDRVVH*PRVTGAGCSLD Trigger: ATCAAGGCTACACCCAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTCTTGCTGGTGGGCTTTGGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CAA 90 bp | CTCTTTCTCCTTGCCAAAGCCCACCAGCAAGACAGAGTGGTCCACTaGCCGAGGGTCACAGGAGCTGGGTGTAGCCTTGATGACACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LFLLAKAHQQDRVVH*PRVTGAGCSLDDTL Trigger: AAGGGTGTCATCAAGGCTACACCCAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTCTTGCTGGTGGGCTTTGGCAAGGAGAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CAA 90 bp | ACGTCCACAAACTGCTGGTGTTTGATGCGCCACAGAGCCTGGATGTaGTCGGCAGCTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: TSTNCWCLMRHRAWM*SAAAMAQQHLQLPF Trigger: AAAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
||
| CDS GCA 72 bp | CAGTCCAGCAGCTCCTGCACAGAGACGTCCACAAACTaGTGGTGTTTGATGCGCCACAGAGCCTGGATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QSSSSCTETSTN*WCLMRHRAWML Trigger: CAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCTGCTGGACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
||
| CDS CCA 72 bp | TCTTTCTCCTTGCCAAAGCCCACCAGCAAGACAGAGTaGTCCACTTGCCGAGGGTCACAGGAGCTGGGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SFSLPKPTSKTE*STCRGSQELGV Trigger: TACACCCAGCTCCTGTGACCCTCGGCAAGTGGACCACTCTGTCTTGCTGGTGGGCTTTGGCAAGGAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CAA 72 bp | AGCTCCTGCACAGAGACGTCCACAAACTGCTGGTGTTaGATGCGCCACAGAGCCTGGATGTTGTCGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: SSCTETSTNCWC*MRHRAWMLSAA Trigger: AGCTGCCGACAACATCCAGGCTCTGTGGCGCATCAAACACCAGCAGTTTGTGGACGTCTCTGTGCAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CAA 90 bp | TCGGCAGCTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTGGTTCTaGACCGACGAGATGATGTTCTTTGCTTTACGCCAGTCACAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SAAAMAQQHLQLPWF*TDEMMFFALRQSQV Trigger: CACCTGTGACTGGCGTAAAGCAAAGAACATCATCTCGTCGGTCAAGAACCAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS GCA 72 bp | GTAGCCTTTGAGCCTGAGCCAGATTGTGGGCAAAGATaGTCAGACGGCGAGTGTACTCTGCTGGGTTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: VAFEPEPDCGQR*SDGECTLLGSS Trigger: ACTGGAACCCAGCAGAGTACACTCGCCGTCTGAGCATCTTTGCCCACAATCTGGCTCAGGCTCAAAGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 72 bp | TTGGTCATGTTGGGGGTCCTTTCTGGTGACCTCTCCTaGCCGTATAACTGGCCAAACTCCTCCTCTGTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LVMLGVLSGDLS*PYNWPNSSSVR Trigger: CCTCACAGAGGAGGAGTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGACCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 72 bp | GTGGGCAAAGATGCTCAGACGGCGAGTGTACTCTGCTaGGTTCCAGTAACTCCGGTTGAACCGGATCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: VGKDAQTASVLC*VPVTPVEPDLE Trigger: TTCCAGATCCGGTTCAACCGGAGTTACTGGAACCCAGCAGAGTACACTCGCCGTCTGAGCATCTTTGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 72 bp | GGGGTCCTTTCTGGTGACCTCTCCTGCCCGTATAACTaGCCAAACTCCTCCTCTGTGAGGTCACTGAATGGA | + |
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Preference number: 6 (lower is better) Translates to: GVLSGDLSCPYN*PNSSSVRSLNG Trigger: TCCATTCAGTGACCTCACAGAGGAGGAGTTTGGCCAGTTATACGGGCAGGAGAGGTCACCAGAAAGGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 72 bp | ATTGTGGGCAAAGATGCTCAGACGGCGAGTGTACTCTaGTGGGTTCCAGTAACTCCGGTTGAACCGGATCTG | + |
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Preference number: 6 (lower is better) Translates to: IVGKDAQTASVL*WVPVTPVEPDL Trigger: CAGATCCGGTTCAACCGGAGTTACTGGAACCCAGCAGAGTACACTCGCCGTCTGAGCATCTTTGCCCACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS GCA 72 bp | GCTTCCCTGGTTCTTGACCGACGAGATGATGTTCTTTaGTTTACGCCAGTCACAGGTGCGGGGCACAGATTC | + |
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Preference number: 6 (lower is better) Translates to: ASLVLDRRDDVL*FTPVTGAGHRF Trigger: GAATCTGTGCCCCGCACCTGTGACTGGCGTAAAGCAAAGAACATCATCTCGTCGGTCAAGAACCAGGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS GCA 72 bp | GGACAGTTAGATATGCGTCCCACACGAAGCCACCATTaGAACCATTTCCACAGCGTTCGCAGTCCAGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: GQLDMRPTRSHH*NHFHSVRSPAA Trigger: AGCTGCTGGACTGCGAACGCTGTGGAAATGGTTGCAATGGTGGCTTCGTGTGGGACGCATATCTAACTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 72 bp | ATCCAGTATGGGGAGGAGTGGCGACGTTTTCGAGAATaGGACAAGACTGTCCCTGTCTGCATGCCCTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: IQYGEEWRRFRE*DKTVPVCMPSF Trigger: GAAAGAGGGCATGCAGACAGGGACAGTCTTGTCCCATTCTCGAAAACGTCGCCACTCCTCCCCATACTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 72 bp | CCCAGCAGCATTTGCAGCTTCCCTTTTTGGTCATGTTaGGGGTCCTTTCTGGTGACCTCTCCTGCCCGTATA | + |
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Preference number: 6 (lower is better) Translates to: PSSICSFPFWSC*GSFLVTSPARI Trigger: TATACGGGCAGGAGAGGTCACCAGAAAGGACCCCCAACATGACCAAAAAGGGAAGCTGCAAATGCTGCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000236256.2 |
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| CDS CAA 72 bp | GCCATGGCCCAGCAGCATTTGCAGCTTCCCTGGTTCTaGACCGACGAGATGATGTTCTTTGCTTTACGCCAG | + |
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Preference number: 6 (lower is better) Translates to: AMAQQHLQLPWF*TDEMMFFALRQ Trigger: CTGGCGTAAAGCAAAGAACATCATCTCGTCGGTCAAGAACCAGGGAAGCTGCAAATGCTGCTGGGCCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS CAA 72 bp | AGGACAGTTAGATATGCGTCCCACACGAAGCCACCATaGCAACCATTTCCACAGCGTTCGCAGTCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: RTVRYASHTKPP*QPFPQRSQSSS Trigger: GCTGCTGGACTGCGAACGCTGTGGAAATGGTTGCAATGGTGGCTTCGTGTGGGACGCATATCTAACTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CAA 90 bp | CTGTTGTTGAGGACAGTTAGATATGCGTCCCACACGAAGCCACCATaGCAACCATTTCCACAGCGTTCGCAGTCCAGCAGCTCCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: LLLRTVRYASHTKPP*QPFPQRSQSSSSCT Trigger: TGTGCAGGAGCTGCTGGACTGCGAACGCTGTGGAAATGGTTGCAATGGTGGCTTCGTGTGGGACGCATATCTAACTGTCCTCAACAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS TCA 72 bp | TCAGGGAGGACAAGAGGTCCGTGCCTTCTTTACTGGTaGGTCCACTTGAGCTGTGAAGGGATACTTGGTGAC | + |
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Preference number: 6 (lower is better) Translates to: SGRTRGPCLLYW*VHLSCEGILGD Trigger: GTCACCAAGTATCCCTTCACAGCTCAAGTGGACTCACCAGTAAAGAAGGCACGGACCTCTTGTCCTCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 72 bp | GCAGCTGCCATGGCCCAGCAGCATTTGCAGCTTCCCTaGTTCTTGACCGACGAGATGATGTTCTTTGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: AAAMAQQHLQLP*FLTDEMMFFAL Trigger: TAAAGCAAAGAACATCATCTCGTCGGTCAAGAACCAGGGAAGCTGCAAATGCTGCTGGGCCATGGCAGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025844.6 |
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| CDS TCA 72 bp | ATGGATAATCCTTTTCACTGGCCAGGCCACTGTTGTTaGGGACAGTTAGATATGCGTCCCACACGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: MDNPFHWPGHCC*GQLDMRPTRSH Trigger: GTGGCTTCGTGTGGGACGCATATCTAACTGTCCTCAACAACAGTGGCCTGGCCAGTGAAAAGGATTATCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS TCA 72 bp | AGTGGGCAATTGCCTGCTCATTATTGGACAACATGGTaGAATCCTGGATCCAGGCCACCTTCTTGTACTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGQLPAHYWTTW*NPGSRPPSCTS Trigger: AGAAGTACAAGAAGGTGGCCTGGATCCAGGATTTCACCATGTTGTCCAATAATGAGCAGGCAATTGCCCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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| CDS CCA 72 bp | ATTGCCTGCTCATTATTGGACAACATGGTGAAATCCTaGATCCAGGCCACCTTCTTGTACTTCTTGGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: IACSLLDNMVKS*IQATFLYFLAR Trigger: CCTAGCCAAGAAGTACAAGAAGGTGGCCTGGATCCAGGATTTCACCATGTTGTCCAATAATGAGCAGGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025844.6 ENSMUST00000236256.2 |
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