Pregenerated sensors for CTSS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038642Ensembl transcript IDs: ENSMUST00000015667.9, ENSMUST00000116304.3
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGGTTCCTCTGGATATTaGAGGCAAATTAAGTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: GLSCYKWLLENTRQQGVKGSSGY*RQIKLE Trigger: CTCTAACTTAATTTGCCTGCAATATCCAGAGGAACC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGGGCCCCCACAGCACTaGAAGCCCAGCAGGCACCAC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKGPPQH*KPSRHH Trigger: GTGGTGCCTGCTGGGCTTTCAGTGCTGTGGGGGCCC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR GCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAACTGCAGTTGCTCCATTaGCACAGAGCACACCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKLQLLH*HRAHQG Trigger: CCCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAG...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR GCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAAATGGCTGGCGTCGATaGCCACAGAGACAGGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKNGWRR*PQRQAL Trigger: AAGGGCCTGTCTCTGTGGGCATCGACGCCAGCCATT...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGGTATTTCACCTCAGTaGCGCAGCCCTTCTCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKGISPQ*RSPSLS Trigger: GGAGAGAGAAGGGCTGCGTCACTGAGGTGAAATACC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAACAGTCCACCAGGTTCTaGGCACTGAGGGATATCAGC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKQSTRF*ALRDIS Trigger: GCTGATATCCCTCAGTGCTCAGAACCTGGTGGACTG...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR GCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGTTTTCAGCTTCAGCTaGCCTTCAAGGGCCCCCACA | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKVFSFS*PSRAPT Trigger: TGTGGGGGCCCTTGAAGGGCAGCTGAAGCTGAAAAC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR GCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAACACCATGATTCACATTaGCCGTACAGGAGGGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKHHDSH*PYRRGR Trigger: ACGACCCCTCCTGTACGGGCAATGTGAATCATGGTG...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGCACCACAAGAACCCTaGTATTTCACCTCAGTGACG | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKAPQEP*YFTSVT Trigger: CGTCACTGAGGTGAAATACCAGGGTTCTTGTGGTGC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGATTCTTTTCCCAGATaGGACGCCGTACTTCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKDSFPR*DAVLLL Trigger: AAGAAGAAGTACGGCGTCTCATCTGGGAAAAGAATC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAATCCGAATGTATCCTTaGTCACCAAAGTTAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKIRMYP*SPKLRP Trigger: GGGCCTTAACTTTGGTGATCAAGGATACATTCGGAT...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR GCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAACAAGCCAGTAATCTTTaGCATCAAGAGTCCCATAGC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKQASNL*HQESHS Trigger: GCTATGGGACTCTTGATGGCAAAGATTACTGGCTTG...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGACACTTTTCATCCGTaGCTTTGTAGGGATAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKDTFHP*LCRDRK Trigger: CTTCCTATCCCTACAAAGCCACGGATGAAAAGTGTC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAATACTTTTCTTCATTTaGGCAGTCCACCAGGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKILFFI*AVHQVL Trigger: CAGAACCTGGTGGACTGCTCAAATGAAGAAAAGTAT...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR TCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAACTAGCAATTCCGCAGTaGTTTTTATTATTTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKLAIPQ*FLLFLA Trigger: GGCAAGAAATAATAAAAATCACTGCGGAATTGCTAG...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAATTGTATTCTTTCTCATaGGTTTTCTTCCAGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKLYSFS*VFFQRS Trigger: GGATCTCTGGAAGAAAACCCATGAGAAAGAATACAA...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CCA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAACAAGATTTCTTCATTaGTCATGTCTCCCATATCGT | + |
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Preference number: 4 (lower is better) Translates to: GLSCYKWLLENTRQQGVKTRFLH*SCLPYR Trigger: ACGATATGGGAGACATGACCAATGAAGAAATCTTGT...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS GCA 90 bp | ATCCCAATGGTAGTCCAGGGTAGGGTCTCTCTGCAGTTGCTCCATTaGCACAGAGCACACCAGGGGCATCCAAAACAGCCATCTTATGGC | + |
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Preference number: 5 (lower is better) Translates to: IPMVVQGRVSLQLLH*HRAHQGHPKQPSYG Trigger: GCCATAAGATGGCTGTTTTGGATGCCCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAGAGAGACCCTACCCTGGACTACCATTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116304.3 |
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| CDS GCA 90 bp | ATCCCAATGGTAGTCCAGGGTAGGGTCTCTCTGCAGTTGCTCCATTaGCACAGAGCACACCAGGGGCATCCAAAACAGCCATCTTCTGAT | + |
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Preference number: 5 (lower is better) Translates to: IPMVVQGRVSLQLLH*HRAHQGHPKQPSSD Trigger: ATCAGAAGATGGCTGTTTTGGATGCCCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAGAGAGACCCTACCCTGGACTACCATTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015667.9 |
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| CDS TCA 90 bp | CTTCTCTCTCCAGTCCACAGTGTCAGGCAATGTCCGATTAGAGTATaGCCTGAAAGTGACAGTCTTCGGAGACTGTCGGGGAATTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: LLSPVHSVRQCPIRV*PESDSLRRLSGNSQ Trigger: CTGAGAATTCCCCGACAGTCTCCGAAGACTGTCACTTTCAGGTCATACTCTAATCGGACATTGCCTGACACTGTGGACTGGAGAGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS GCA 90 bp | ATAGTGACACTTTTCATCCGTGGCTTTGTAGGGATAGGAAGCGTCTaGCTCTATGCCCCCATTATCAATGATGTACTGGAAAGCTTCGGT | + |
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Preference number: 5 (lower is better) Translates to: IVTLFIRGFVGIGSV*LYAPIINDVLESFG Trigger: ACCGAAGCTTTCCAGTACATCATTGATAATGGGGGCATAGAGGCAGACGCTTCCTATCCCTACAAAGCCACGGATGAAAAGTGTCACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CAA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAATCTGCAGTTGCTCCATaGCCACAGAGCACACCAGGG | + |
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Preference number: 5 (lower is better) Translates to: GLSCYKWLLENTRQQGVKSAVAP*PQSTPG Trigger: CCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAGA...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CAA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAAGGGTCTCTCTGCAGTaGCTCCATTGCCACAGAGCA | + |
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Preference number: 5 (lower is better) Translates to: GLSCYKWLLENTRQQGVKRVSLQ*LHCHRA Trigger: TGCTCTGTGGCAATGGAGCAACTGCAGAGAGACCCT...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CAA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAAGGAGCTGAATGTACCTaGAACACGTGGCAGCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: GLSCYKWLLENTRQQGVKGAECT*NTWQLD Trigger: ATCGAGCTGCCACGTGTTCAAGGTACATTCAGCTCC...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS GCA 90 bp | GTAAGAGCAATAACTAGCAATTCCGCAGTGATTTTTATTATTTCTTaGCATCCGAATGTATCCTTGATCACCAAAGTTAAGGCCCCAACT | + |
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Preference number: 5 (lower is better) Translates to: VRAITSNSAVIFIIS*HPNVSLITKVKAPT Trigger: AGTTGGGGCCTTAACTTTGGTGATCAAGGATACATTCGGATGGCAAGAAATAATAAAAATCACTGCGGAATTGCTAGTTATTGCTCTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS-3UTR CAA 90 bp | GGGCTATCATGTTACAAATGGTTATTAGAAAACACTAGACAACAGGGTGTAAAACATACTTTTCTTCATTaGAGCAGTCCACCAGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GLSCYKWLLENTRQQGVKHTFLH*SSPPGS Trigger: AGAACCTGGTGGACTGCTCAAATGAAGAAAAGTATG...TTTTACACCCTGTTGTCTAGTGTTTTCTAATAACCATTTGTAACATGATAGCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS GCA 72 bp | GTAGTCCAGGGTAGGGTCTCTCTGCAGTTGCTCCATTaGCACAGAGCACACCAGGGGCATCCAAAACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VVQGRVSLQLLH*HRAHQGHPKQP Trigger: TGGCTGTTTTGGATGCCCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAGAGAGACCCTACCCTGGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS CAA 72 bp | ATCCCAATGGTAGTCCAGGGTAGGGTCTCTCTGCAGTaGCTCCATTGCCACAGAGCACACCAGGGGCATCCA | + |
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Preference number: 6 (lower is better) Translates to: IPMVVQGRVSLQ*LHCHRAHQGHP Trigger: TGGATGCCCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAGAGAGACCCTACCCTGGACTACCATTGGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS CAA 90 bp | CTTCCAGAGATCCCAATGGTAGTCCAGGGTAGGGTCTCTCTGCAGTaGCTCCATTGCCACAGAGCACACCAGGGGCATCCAAAACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: LPEIPMVVQGRVSLQ*LHCHRAHQGHPKQP Trigger: TGGCTGTTTTGGATGCCCCTGGTGTGCTCTGTGGCAATGGAGCAACTGCAGAGAGACCCTACCCTGGACTACCATTGGGATCTCTGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS TCA 72 bp | CCAGTCCACAGTGTCAGGCAATGTCCGATTAGAGTATaGCCTGAAAGTGACAGTCTTCGGAGACTGTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PVHSVRQCPIRV*PESDSLRRLSG Trigger: CCCCGACAGTCTCCGAAGACTGTCACTTTCAGGTCATACTCTAATCGGACATTGCCTGACACTGTGGACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS TCA 72 bp | GATAGGAAGCGTCTGCCTCTATGCCCCCATTATCAATaGTGTACTGGAAAGCTTCGGTCATGTAGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: DRKRLPLCPHYQ*CTGKLRSCSRL Trigger: GAGGCGGCTACATGACCGAAGCTTTCCAGTACATCATTGATAATGGGGGCATAGAGGCAGACGCTTCCTATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS GCA 72 bp | CTTTTCATCCGTGGCTTTGTAGGGATAGGAAGCGTCTaGCTCTATGCCCCCATTATCAATGATGTACTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LFIRGFVGIGSV*LYAPIINDVLE Trigger: TTCCAGTACATCATTGATAATGGGGGCATAGAGGCAGACGCTTCCTATCCCTACAAAGCCACGGATGAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS CAA 72 bp | TTCATTGGTCATGTCTCCCATATCGTTCATGCCCACTaGGTAGGTATGCATTCCCATAGAATATTCGAGATT | + |
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Preference number: 6 (lower is better) Translates to: FIGHVSHIVHAH*VGMHSHRIFEI Trigger: AATCTCGAATATTCTATGGGAATGCATACCTACCAAGTGGGCATGAACGATATGGGAGACATGACCAATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS CAA 90 bp | CAAGATTTCTTCATTGGTCATGTCTCCCATATCGTTCATGCCCACTaGGTAGGTATGCATTCCCATAGAATATTCGAGATTGTGAATCAT | + |
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Preference number: 6 (lower is better) Translates to: QDFFIGHVSHIVHAH*VGMHSHRIFEIVNH Trigger: ATGATTCACAATCTCGAATATTCTATGGGAATGCATACCTACCAAGTGGGCATGAACGATATGGGAGACATGACCAATGAAGAAATCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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| CDS GCA 72 bp | ATAACTAGCAATTCCGCAGTGATTTTTATTATTTCTTaGCATCCGAATGTATCCTTGATCACCAAAGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: ITSNSAVIFIIS*HPNVSLITKVK Trigger: CTTAACTTTGGTGATCAAGGATACATTCGGATGGCAAGAAATAATAAAAATCACTGCGGAATTGCTAGTTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015667.9 ENSMUST00000116304.3 |
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