Pregenerated sensors for CTSM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074871Ensembl transcript IDs: ENSMUST00000099451.4, ENSMUST00000223778.2, ENSMUST00000225268.2, ENSMUST00000225965.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATaGTGTCTTCTGTCCATTCCTTCCTTGTCAGCACCAGGTAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: QQWPVILKWKCLFST*CLLSIPSLSAPGSS Trigger: TGAACTACCTGGTGCTGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR GCA 90 bp | AGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTaGCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCTTGTCA | + |
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Preference number: 1 (lower is better) Translates to: SVLYTQQWPVILKWK*LFSTWCLLSIPSLS Trigger: TGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR CCA 90 bp | AACTGTAGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATaGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: NCSVLYTQQWPVILK*KCLFSTWCLLSIPS Trigger: GGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACTACAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR TCA 90 bp | TCAATAACTGTAGTGTTTTATATACACAGCAGTGGCCTGTTATTTTaGAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTC | + |
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Preference number: 1 (lower is better) Translates to: SITVVFYIHSSGLLF*NGSASSLHGVFCPF Trigger: GAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACTACAGTTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACGGCTTGCTATTTTCCTaGCACATCCTTAGAACAACA | + |
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Preference number: 2 (lower is better) Translates to: FPLACYFPDTSLEQHITDGLLFS*HILRTT Trigger: TGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCC...GTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR CCA 90 bp | TACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGCCTGTTATTTTGAAATaGAAGTGCCTCTTCTCTACA | + |
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Preference number: 2 (lower is better) Translates to: YTAVACYFEMEVPLLYMVPVILK*KCLFST Trigger: TGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGG...CACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAAATTTTGAAATGGAAGTaGCTCTTCTCTACATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: PLACYFPDTSLEQHITDKILKWK*LFSTWC Trigger: ACACCATGTAGAGAAGAGGCACTTCCATTTCAAAAT...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCATTTTGAAATGGAAGTaGCTCTTCTCTACATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSILKWK*LFSTWC Trigger: ACACCATGTAGAGAAGAGGCACTTCCATTTCAAAAT...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR CAA 90 bp | TTCAATAACTGTAGTGTTTTATATACACAGCAGTGGCCTGTTATTTaGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: FNNCSVLYTQQWPVI*KWKCLFSTWCLLSI Trigger: AATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACTACAGTTATTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTCCTGTTATTTTGAAATaGAAGTGCCTCTTCTCTACA | + |
|
Preference number: 2 (lower is better) Translates to: VLYTQQWPVILKWKCLFSPVILK*KCLFST Trigger: TGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGG...AGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR GCA 90 bp | GCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCAAAATTTTGAAATGGAAGTaGCTCTTCTCTACATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ACYFPDTSLEQHITDKSKILKWK*LFSTWC Trigger: ACACCATGTAGAGAAGAGGCACTTCCATTTCAAAAT...TTTGGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR CAA 90 bp | AAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCTTGTCACAGTGGCCTGTTATTTaGAAATGGAAGTGCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: KWKCLFSTWCLLSIPSLSQWPVI*KWKCLF Trigger: GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTG...TGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCCAGTGGCCTGTTATTTaGAAATGGAAGTGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSQWPVI*KWKCLF Trigger: GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTG...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTCAGTGGCCTGTTATTTaGAAATGGAAGTGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLYTQQWPVILKWKCLFSQWPVI*KWKCLF Trigger: GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTG...AGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR TCA 72 bp | GTAGTGTTTTATATACACAGCAGTGGCCTGTTATTTTaGAATGGAAGTGCCTCTTCTCTACATGGTGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VVFYIHSSGLLF*NGSASSLHGVF Trigger: GAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCAAACAGTGGCCTGTTATTTaGAAATGGAAGTGCCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ACYFPDTSLEQHITDKSKQWPVI*KWKCLF Trigger: GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTG...TTTGGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| 3UTR CCA 72 bp | ACACATTTTCATCTCCAAGGTTTATTTTCCTGCACATaGACTTTGAACTGCAAGATTCTGGCAATGTGTAAT | + |
|
Preference number: 3 (lower is better) Translates to: THFHLQGLFSCT*TLNCKILAMCN Trigger: ATTACACATTGCCAGAATCTTGCAGTTCAAAGTCCATGTGCAGGAAAATAAACCTTGGAGATGAAAATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCTTGTCACCAGCCAGTATTTCCTaGCATCTGATTCTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KWKCLFSTWCLLSIPSLSPASIS*HLILFL Trigger: CAGGAAGAGAATCAGATGGCAGGAAATACTGGCTGG...TGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCCGATTGCAACAGAAATaGGCCCTATACTTGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: WPVILKWKCLFSTWCLLSRLQQK*ALYLPQ Trigger: CTGTGGCAAGTATAGGGCCCATTTCTGTTGCAATCG...GGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR TCA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTACCCATGCTGTTCTTaGCCAGCCAGTATTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSYPCCS*PASISC Trigger: GCAGGAAATACTGGCTGGTCAAGAACAGCATGGGTA...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR TCA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATACCCATGCTGTTCTTaGCCAGCCAGTATTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLACYFPDTSLEQHITDKYPCCS*PASISC Trigger: GCAGGAAATACTGGCTGGTCAAGAACAGCATGGGTA...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | AATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCTTGTCAGATAGAACAGGAAAGATaGATGCCTTGCATCGATTGC | + |
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Preference number: 4 (lower is better) Translates to: NGSASSLHGVFCPFLPCQIEQER*MPCIDC Trigger: GCAATCGATGCAAGGCATGCATCTTTCCTGTTCTAT...CTGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR CCA 90 bp | AATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCTTGTCAGATTCAACATCCAAAATaGGATCAGGTGCTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: NGSASSLHGVFCPFLPCQIQHPK*DQVLVM Trigger: CATCACCAGCACCTGATCCCATTTTGGATGTTGAAT...CTGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR TCA 90 bp | TGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCTGGACTGTACCTGCATaGTCCATCCTTTTCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: WPVILKWKCLFSTWCLLSWTVPA*SILFFI Trigger: TATGAAGAAAAGGATGGATCATGCAGGTACAGTCCA...GGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225965.2 |
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| CDS-3UTR GCA 90 bp | TACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGATGCAAGGTATGTATTaGCCAAATAACAGCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: YTAVACYFEMEVPLLYMVMQGMY*PNNSPS Trigger: ACTGGGGCTGTTATTTGGGCAATACATACCTTGCAT...CACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | TGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCAACAGGAAAGATGCATaGCTTGCATCGATTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: WPVILKWKCLFSTWCLLSNRKDA*LASIAT Trigger: TGTTGCAATCGATGCAAGGCATGCATCTTTCCTGTT...GGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR GCA 90 bp | CAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGATAGAACAGGAAAGATaGATGCCTTGCATCGATTGC | + |
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Preference number: 4 (lower is better) Translates to: QWPVILKWKCLFSTWCLLIEQER*MPCIDC Trigger: GCAATCGATGCAAGGCATGCATCTTTCCTGTTCTAT...CAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR CCA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAACGATTGCAACAGAAATaGGCCCTATACTTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: PLACYFPDTSLEQHITDKRLQQK*ALYLPQ Trigger: CTGTGGCAAGTATAGGGCCCATTTCTGTTGCAATCG...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR GCA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAAAACAAGAATTACATCTaGCCTGTGTCTGCACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: PLACYFPDTSLEQHITDKNKNYI*PVSAQE Trigger: CTCCTGTGCAGACACAGGGCAGATGTAATTCTTGTT...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | AAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCTTGTCACATCACATAGTGCAATaGAAGGTATGTATTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KWKCLFSTWCLLSIPSLSHHIVQ*KVCIAQ Trigger: TTGGGCAATACATACCTTGCATTGCACTATGTGATG...TGACAAGGAAGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCCCAGCCAGTATTTCCTaGCATCTGATTCTCTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SVLYTQQWPVILKWKCLFPASIS*HLILFL Trigger: CAGGAAGAGAATCAGATGGCAGGAAATACTGGCTGG...GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCCGATTGCAACAGAAATaGGCCCTATACTTGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LACYFPDTSLEQHITDKSRLQQK*ALYLPQ Trigger: CTGTGGCAAGTATAGGGCCCATTTCTGTTGCAATCG...GGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR TCA 90 bp | CTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCGTATTTCCTGCCATCTaGTTCTCTTCCTGTAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LACYFPDTSLEQHITDKSVFPAI*FSSCKA Trigger: GGCTTTACAGGAAGAGAATCAGATGGCAGGAAATAC...GGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAAATTGTCTTCCCATACTaGTCTCTTCTGTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PLACYFPDTSLEQHITDKIVFPY*SLLSFF Trigger: GAAGAAGGACAGAAGAGAGCAGTATGGGAAGACAAT...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | GTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTATTGTCTTCCCATACTaGTCTCTTCTGTCCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: VILKWKCLFSTWCLLSIPIVFPY*SLLSFF Trigger: GAAGAAGGACAGAAGAGAGCAGTATGGGAAGACAAT...AGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | GTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTAACAAGAATTACATCTaGCCTGTGTCTGCACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: VLYTQQWPVILKWKCLFSNKNYI*PVSAQE Trigger: CTCCTGTGCAGACACAGGGCAGATGTAATTCTTGTT...AGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCATAGAACAGGAAAGATaGATGCCTTGCATCGATTGC | + |
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Preference number: 4 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSIEQER*MPCIDC Trigger: GCAATCGATGCAAGGCATGCATCTTTCCTGTTCTAT...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR GCA 90 bp | TTTCCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACATAGAACAGGAAAGATaGATGCCTTGCATCGATTGC | + |
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Preference number: 4 (lower is better) Translates to: FPLACYFPDTSLEQHITDIEQER*MPCIDC Trigger: GCAATCGATGCAAGGCATGCATCTTTCCTGTTCTAT...GTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR CCA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAAATTCAACATCCAAAATaGGATCAGGTGCTGGTGATG | + |
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Preference number: 4 (lower is better) Translates to: PLACYFPDTSLEQHITDKIQHPK*DQVLVM Trigger: CATCACCAGCACCTGATCCCATTTTGGATGTTGAAT...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR TCA 90 bp | AACTGTAGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCGTATTTCCTGCCATCTaGTTCTCTTCCTGTAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NCSVLYTQQWPVILKWKCVFPAI*FSSCKA Trigger: GGCTTTACAGGAAGAGAATCAGATGGCAGGAAATAC...GCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACTACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCAACAGGAAAGATGCATaGCTTGCATCGATTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: SVLYTQQWPVILKWKCLFNRKDA*LASIAT Trigger: TGTTGCAATCGATGCAAGGCATGCATCTTTCCTGTT...GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR CCA 90 bp | ATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGGTTTCCCTTGTCTCTaGAAATCTTCATATAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: IYTAVACYFEMEVPLLYMGFPCL*KSSYSL Trigger: AAGGCTATATGAAGATTTCCAGAGACAAGGGAAACC...CATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR TCA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCCCCCATTGTGCAGTTTaGTCTTTTTCATATTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSPHCAV*SFSYCL Trigger: AAGACAATATGAAAAAGATCAAACTGCACAATGGGG...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR GCA 90 bp | AGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCCATCACATAGTGCAATaGAAGGTATGTATTGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SVLYTQQWPVILKWKCLFHHIVQ*KVCIAQ Trigger: TTGGGCAATACATACCTTGCATTGCACTATGTGATG...GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CCA 90 bp | CTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCGGTTTCCCTTGTCTCTaGAAATCTTCATATAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LACYFPDTSLEQHITDKSGFPCL*KSSYSL Trigger: AAGGCTATATGAAGATTTCCAGAGACAAGGGAAACC...GGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR TCA 90 bp | AGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCCCCCATTGTGCAGTTTaGTCTTTTTCATATTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SVLYTQQWPVILKWKCLFPHCAV*SFSYCL Trigger: AAGACAATATGAAAAAGATCAAACTGCACAATGGGG...GAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR TCA 90 bp | ACAACTGACTTTTCAATAACTGTAGTGTTTTATATACACAGCAGTGGCCTGTTATGGACTGTACCTGCATaGTCCATCCTTTTCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: TTDFSITVVFYIHSSGLLWTVPA*SILFFI Trigger: TATGAAGAAAAGGATGGATCATGCAGGTACAGTCCA...TAACAGGCCACTGCTGTGTATATAAAACACTACAGTTATTGAAAAGTCAGTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225965.2 |
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| CDS-3UTR TCA 90 bp | GCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCAAATGGACTGTACCTGCATaGTCCATCCTTTTCTTCATA | + |
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Preference number: 4 (lower is better) Translates to: ACYFPDTSLEQHITDKSKWTVPA*SILFFI Trigger: TATGAAGAAAAGGATGGATCATGCAGGTACAGTCCA...TTTGGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225965.2 |
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| CDS-3UTR GCA 90 bp | GCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCAAAAACAGGAAAGATGCATaGCTTGCATCGATTGCAACA | + |
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Preference number: 4 (lower is better) Translates to: ACYFPDTSLEQHITDKSKNRKDA*LASIAT Trigger: TGTTGCAATCGATGCAAGGCATGCATCTTTCCTGTT...TTTGGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR CCA 90 bp | TTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACAGAGCTACTGCAGTTTaGCTCATAATATATACCTCT | + |
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Preference number: 4 (lower is better) Translates to: FIYTAVACYFEMEVPLLYRATAV*LIIYTS Trigger: AGAGGTATATATTATGAGCCAAACTGCAGTAGCTCT...GTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CCA 90 bp | GCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAATCCAAAAGAGCTACTGCAGTTTaGCTCATAATATATACCTCT | + |
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Preference number: 4 (lower is better) Translates to: ACYFPDTSLEQHITDKSKRATAV*LIIYTS Trigger: AGAGGTATATATTATGAGCCAAACTGCAGTAGCTCT...TTTGGATTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCACAGCCCCAGTTGCCTaGAGGCCTAGAACAGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSTAPVA*RPRTVH Trigger: GTGGACTGTTCTAGGCCTCAAGGCAACTGGGGCTGT...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | TTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACACAGCCCCAGTTGCCTaGAGGCCTAGAACAGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: FIYTAVACYFEMEVPLLYTAPVA*RPRTVH Trigger: GTGGACTGTTCTAGGCCTCAAGGCAACTGGGGCTGT...GTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAAGTACCCATGCTGTTCTaGACCAGCCAGTATTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: PLACYFPDTSLEQHITDKVPMLF*TSQYFL Trigger: CAGGAAATACTGGCTGGTCAAGAACAGCATGGGTAC...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | ACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTCCACAGTGGTTTCCCTaGTCTCTGGAAATCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: TAVACYFEMEVPLLYMVSPQWFP*SLEIFI Trigger: TATGAAGATTTCCAGAGACAAGGGAAACCACTGTGG...AGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACAGGCCACTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | CCCCTGGCTTGCTATTTTCCTGACACATCCTTAGAACAACATATTACTGACAAAAAATGGGCCCTATACTaGCCACAGCATTCATTAGGG | + |
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Preference number: 5 (lower is better) Translates to: PLACYFPDTSLEQHITDKKWALY*PQHSLG Trigger: CCCTAATGAATGCTGTGGCAAGTATAGGGCCCATTT...TTTGTCAGTAATATGTTGTTCTAAGGATGTGTCAGGAAAATAGCAAGCCAGGGG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS-3UTR CAA 90 bp | TGTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCCCACAGTGGTTTCCCTaGTCTCTGGAAATCTTCATA | + |
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Preference number: 5 (lower is better) Translates to: CYFEMEVPLLYMVSSVHSPQWFP*SLEIFI Trigger: TATGAAGATTTCCAGAGACAAGGGAAACCACTGTGG...GGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS CCA 90 bp | TTTTTCCAGTTTATAAACTTGGGCAGGTTAACAGACAGACGTTTCTaGACACTTTTCCCTTTCTTGACAGTTGGGACTGGGATTTCAATC | + |
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Preference number: 5 (lower is better) Translates to: FFQFINLGRLTDRRF*TLFPFLTVGTGISI Trigger: GATTGAAATCCCAGTCCCAACTGTCAAGAAAGGGAAAAGTGTCCAGAAACGTCTGTCTGTTAACCTGCCCAAGTTTATAAACTGGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | AACTGTAGTGTTTTATATACACAGCAGTGGCCTGTTATTTTGAAATGGAAGTGCGCCTTTATTGCCCCATaGTGTACCCATGCTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: NCSVLYTQQWPVILKWKCAFIAP*CTHALL Trigger: TAAAAGAGCATGGGTACACAATGGGGCAATAAAGGC...GCACTTCCATTTCAAAATAACAGGCCACTGCTGTGTATATAAAACACTACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000225268.2 |
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| CDS TCA 90 bp | AAAGCCTGTTATATTAGCAGTAGAATTTTCTGGACTGTACCTGCATaGTCCATCCTTTTCTTCATAAGGATAGGTTGCCTCAGACTCTNN | + |
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Preference number: 5 (lower is better) Translates to: KACYISSRIFWTVPA*SILFFIRIGCLRLX Trigger: NNAGAGTCTGAGGCAACCTATCCTTATGAAGAAAAGGATGGATCATGCAGGTACAGTCCAGAAAATTCTACTGCTAATATAACAGGCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225965.2 |
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| CDS-3UTR CAA 90 bp | GTTATTTTGAAATGGAAGTGCCTCTTCTCTACATGGTGTCTTCTGTCCATTCCTTCCCCATTGTGCAGTTaGATCTTTTTCATATTGTCT | + |
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Preference number: 5 (lower is better) Translates to: VILKWKCLFSTWCLLSIPSPLCS*IFFILS Trigger: AGACAATATGAAAAAGATCAAACTGCACAATGGGGA...AGGAATGGACAGAAGACACCATGTAGAGAAGAGGCACTTCCATTTCAAAATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS-3UTR CAA 90 bp | GCATGTTCTGGGGAGTTTCACATTTGTCTATCTCCATTTAACAAGGTACAAATGTCCCCATTGTGCAGTTaGATCTTTTTCATATTGTCT | + |
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Preference number: 5 (lower is better) Translates to: ACSGEFHICLSPFNKVQMSPLCS*IFFILS Trigger: AGACAATATGAAAAAGATCAAACTGCACAATGGGGA...CATTTGTACCTTGTTAAATGGAGATAGACAAATGTGAAACTCCCCAGAACATGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000223778.2 |
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| CDS CAA 90 bp | GTGCAATGCAAGGTATGTATTGCCCAAATAACAGCCCCAGTTGCCTaGAGGCCTAGAACAGTCCACAAGGTTCTGTACACTCAGAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: VQCKVCIAQITAPVA*RPRTVHKVLYTQRD Trigger: ATCCCTCTGAGTGTACAGAACCTTGTGGACTGTTCTAGGCCTCAAGGCAACTGGGGCTGTTATTTGGGCAATACATACCTTGCATTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS TCA 72 bp | AGCCTTTATTGCCCCATTGTGTACCCATGCTGTTCTTaGCCAGCCAGTATTTCCTGCCATCTGATTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLYCPIVYPCCS*PASISCHLILF Trigger: GAAGAGAATCAGATGGCAGGAAATACTGGCTGGTCAAGAACAGCATGGGTACACAATGGGGCAATAAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS CAA 72 bp | AAGGTATGTATTGCCCAAATAACAGCCCCAGTTGCCTaGAGGCCTAGAACAGTCCACAAGGTTCTGTACACT | + |
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Preference number: 6 (lower is better) Translates to: KVCIAQITAPVA*RPRTVHKVLYT Trigger: AGTGTACAGAACCTTGTGGACTGTTCTAGGCCTCAAGGCAACTGGGGCTGTTATTTGGGCAATACATACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS CAA 90 bp | CTGGACTGTACCTGCATGATCCATCCTTTTCTTCATAAGGATAGGTaGCCTCAGACTCTAGACCTCCATTTTCCATCACATAGTGCAATG | + |
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Preference number: 6 (lower is better) Translates to: LDCTCMIHPFLHKDR*PQTLDLHFPSHSAM Trigger: CATTGCACTATGTGATGGAAAATGGAGGTCTAGAGTCTGAGGCAACCTATCCTTATGAAGAAAAGGATGGATCATGCAGGTACAGTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS GCA 72 bp | TTTATAGAACAGGAAAGATGCATGCCTTGCATCGATTaGAACAGAAATGGGCCCTATACTTGCCACAGCATT | + |
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Preference number: 6 (lower is better) Translates to: FIEQERCMPCID*NRNGPYTCHSI Trigger: AATGCTGTGGCAAGTATAGGGCCCATTTCTGTTGCAATCGATGCAAGGCATGCATCTTTCCTGTTCTATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225268.2 ENSMUST00000225965.2 |
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| CDS CAA 72 bp | ACCTGCATGATCCATCCTTTTCTTCATAAGGATAGGTaGCCTCAGACTCTAGACCTCCATTTTCCATCACAT | + |
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Preference number: 6 (lower is better) Translates to: TCMIHPFLHKDR*PQTLDLHFPSH Trigger: ATGTGATGGAAAATGGAGGTCTAGAGTCTGAGGCAACCTATCCTTATGAAGAAAAGGATGGATCATGCAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS CAA 90 bp | TTGGGCAGGTTAACAGACAGACGTTTCTGGACACTTTTCCCTTTCTaGACAGTTGGGACTGGGATTTCAATCATCACTTTCCTAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: LGRLTDRRFWTLFPF*TVGTGISIITFLNS Trigger: AGAATTTAGGAAAGTGATGATTGAAATCCCAGTCCCAACTGTCAAGAAAGGGAAAAGTGTCCAGAAACGTCTGTCTGTTAACCTGCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS CCA 72 bp | CAGACGTTTCTGGACACTTTTCCCTTTCTTGACAGTTaGGACTGGGATTTCAATCATCACTTTCCTAAATTC | + |
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Preference number: 6 (lower is better) Translates to: QTFLDTFPFLDS*DWDFNHHFPKF Trigger: GAATTTAGGAAAGTGATGATTGAAATCCCAGTCCCAACTGTCAAGAAAGGGAAAAGTGTCCAGAAACGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS CAA 72 bp | TTAACAGACAGACGTTTCTGGACACTTTTCCCTTTCTaGACAGTTGGGACTGGGATTTCAATCATCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: LTDRRFWTLFPF*TVGTGISIITF Trigger: GAAAGTGATGATTGAAATCCCAGTCCCAACTGTCAAGAAAGGGAAAAGTGTCCAGAAACGTCTGTCTGTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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| CDS TCA 72 bp | TATATTAGCAGTAGAATTTTCTGGACTGTACCTGCATaGTCCATCCTTTTCTTCATAAGGATAGGTTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: YISSRIFWTVPA*SILFFIRIGCL Trigger: GAGGCAACCTATCCTTATGAAGAAAAGGATGGATCATGCAGGTACAGTCCAGAAAATTCTACTGCTAATATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 ENSMUST00000225965.2 |
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| CDS CCA 72 bp | TTTCTGGACACTTTTCCCTTTCTTGACAGTTGGGACTaGGATTTCAATCATCACTTTCCTAAATTCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: FLDTFPFLDSWD*DFNHHFPKFFK Trigger: CTTGAAGAATTTAGGAAAGTGATGATTGAAATCCCAGTCCCAACTGTCAAGAAAGGGAAAAGTGTCCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099451.4 ENSMUST00000223778.2 |
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