Pregenerated sensors for CTSL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021477Ensembl transcript IDs: ENSMUST00000021933.8, ENSMUST00000222517.2, ENSMUST00000222971.2, ENSMUST00000223494.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCGGGGCAGGATCAGGGCAATGCAAGCAGCAGCAGGCAGCGAATGTaGTGGATTTTGGCATGGGTGATAGTGAGTAGACAGAGCCAGCAA | + |
|
Preference number: 1 (lower is better) Translates to: PGQDQGNASSSRQRM*WILAWVIVSRQSQQ Trigger: TTGCTGGCTCTGTCTACTCACTATCACCCATGCCAAAATCCACCACATTCGCTGCCTGCTGCTGCTTGCATTGCCCTGATCCTGCCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | GGGCAGGATCAGGGCAATGCAAGCAGCAGCAGGCAGCGAATGTGGTaGATTTTGGCATGGGTGATAGTGAGTAGACAGAGCCAGCAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: GQDQGNASSSRQRMW*ILAWVIVSRQSQQR Trigger: CCTTTGCTGGCTCTGTCTACTCACTATCACCCATGCCAAAATCCACCACATTCGCTGCCTGCTGCTGCTTGCATTGCCCTGATCCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | TGGATTTTGGCATGGGTGATAGTGAGTAGACAGAGCCAGCAAAGGTaGCATGCTGTGGAGGGTGGCTACATTGTCCAAGCTCTGCCATAT | + |
|
Preference number: 1 (lower is better) Translates to: WILAWVIVSRQSQQR*HAVEGGYIVQALPY Trigger: ATATGGCAGAGCTTGGACAATGTAGCCACCCTCCACAGCATGCCACCTTTGCTGGCTCTGTCTACTCACTATCACCCATGCCAAAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 90 bp | TTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTaGACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCACT | + |
|
Preference number: 1 (lower is better) Translates to: FLLQMVVSHHVVAGI*TLDLWKSSRVLLPT Trigger: AGTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | CTCAGGCCAATTGGGAATAATGTCAGCCTACAGCCCACCTGTGTATaGCCCTTTCTAGAACTACATAGCAGGATTGTGGTCTTCACTGGC | + |
|
Preference number: 1 (lower is better) Translates to: LRPIGNNVSLQPTCV*PFLELHSRIVVFTG Trigger: GCCAGTGAAGACCACAATCCTGCTATGTAGTTCTAGAAAGGGCCATACACAGGTGGGCTGTAGGCTGACATTATTCCCAATTGGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | GAGTCAGTTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTT | + |
|
Preference number: 1 (lower is better) Translates to: ESVLVTDGCEPPCGC*DLNSGPLEEQSGAL Trigger: AAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAACTGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | TTTCAGCCACATGGCATGCAACAGGGGGCTGGAGAGATGACTTCATaGTCTAAGAGTACTTTCTGCCCTTGTAGAGGACCCAAGTTCAAC | + |
|
Preference number: 1 (lower is better) Translates to: FQPHGMQQGAGEMTS*SKSTFCPCRGPKFN Trigger: GTTGAACTTGGGTCCTCTACAAGGGCAGAAAGTACTCTTAGACCATGAAGTCATCTCTCCAGCCCCCTGTTGCATGCCATGTGGCTGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR GCA 90 bp | AGCACCAGATCTGATTATAGCTGGTTGTGGGCCACACCATGTGGTTaGTGGGAATTGAACTCAGAACCTCTGGAAGAACAGTCAGTTCTC | + |
|
Preference number: 1 (lower is better) Translates to: STRSDYSWLWATPCG*WELNSEPLEEQSVL Trigger: GAGAACTGACTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGCTATAATCAGATCTGGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | ACCAGATCTGATTATAGCTGGTTGTGGGCCACACCATGTGGTTGCTaGGAATTGAACTCAGAACCTCTGGAAGAACAGTCAGTTCTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: TRSDYSWLWATPCGC*ELNSEPLEEQSVLL Trigger: TAAGAGAACTGACTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGCTATAATCAGATCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 90 bp | CAAGTACCATGGTTTGACTCAATAAGGGTTTGGTCAGTTTTAAGCTaGATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTAC | + |
|
Preference number: 1 (lower is better) Translates to: QVPWFDSIRVWSVLS*IPLDIVSISPHYRY Trigger: GTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACCCTTATTGAGTCAAACCATGGTACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR TCA 90 bp | TCTGGTGTGAAAGTAGCAAGGCAGAGGGCATACAAACGGTATAATTaGAATGCTGAAGTGCATTTATCTTGTGGTATTTGTTTGCTGACC | + |
|
Preference number: 1 (lower is better) Translates to: SGVKVARQRAYKRYN*NAEVHLSCGICLLT Trigger: GGTCAGCAAACAAATACCACAAGATAAATGCACTTCAGCATTTCAATTATACCGTTTGTATGCCCTCTGCCTTGCTACTTTCACACCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 90 bp | TGTCATAGAAAGAACCATACTTACTGGACAGAGACATCTACTTACTaGTTTCTTTTGATAGTGCTGTTTGCCCTGTCAGCTGAACTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: CHRKNHTYWTETSTY*FLLIVLFALSAELK Trigger: CTTCAGTTCAGCTGACAGGGCAAACAGCACTATCAAAAGAAACCAGTAAGTAGATGTCTCTGTCCAGTAAGTATGGTTCTTTCTATGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 90 bp | ATTCAAATCATGACTTGGATCCTCAATGATTCAAGTACCATGGTTTaGCTCAATAAGGGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: IQIMTWILNDSSTMV*LNKGLVSFKLNSFG Trigger: TCCAAAGGAATTCAGCTTAAAACTGACCAAACCCTTATTGAGTCAAACCATGGTACTTGAATCATTGAGGATCCAAGTCATGATTTGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR TCA 90 bp | CTGAATCAGTATTTAGTCCCGAACATTTGTCAACACATTACACACTaGAGTCCCACATACACACACACTGAGCTAAAATTTATTTTTAAG | + |
|
Preference number: 1 (lower is better) Translates to: LNQYLVPNICQHITH*SPTYTHTELKFIFK Trigger: CTTAAAAATAAATTTTAGCTCAGTGTGTGTGTATGTGGGACTTCAGTGTGTAATGTGTTGACAAATGTTCGGGACTAAATACTGATTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR CAA 90 bp | GATCAGGGCAATGCAAGCAGCAGCAGGCAGCGAATGTGGTGGATTTaGGCATGGGTGATAGTGAGTAGACAGAGCCAGCAAAGGTGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DQGNASSSRQRMWWI*AWVIVSRQSQQRWH Trigger: ATGCCACCTTTGCTGGCTCTGTCTACTCACTATCACCCATGCCAAAATCCACCACATTCGCTGCCTGCTGCTGCTTGCATTGCCCTGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 90 bp | GTTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCTCTTACCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLVTDGCEPPCGCWD*NSGPLEEQSGALTH Trigger: GTGGGTAAGAGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCTTACCCACTGAGCCACCTCGCCAGCCCGAACTTTGACCTTTTAAGTACACATTCCTGGGTAGCATaGGGTTTCTCAGGCCAATTG | + |
|
Preference number: 2 (lower is better) Translates to: CSYPLSHLASPNFDLLSTHSWVA*GFSGQL Trigger: CAATTGGCCTGAGAAACCCCATGCTACCCAGGAATG...TGTACTTAAAAGGTCAAAGTTCGGGCTGGCGAGGTGGCTCAGTGGGTAAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTCCTTAATGTACTGGAAAGCAAAATCCATCAGGCCTCCGTTACAGCCCTGGACCCGCACTGGCCCTaGTTCTTCACAGGAGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: IFLNVLESKIHQASVTALDPHWP*FFTGVT Trigger: TGTGACTCCTGTGAAGAACCAGGGCCAGTGCGGGTC...CAGGGCTGTAACGGAGGCCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGTCCTTCCTTCCTTCCTaGAGCGGCGTCCGTCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKSFLPS*SGVRQA Trigger: TGCCTGACGGACGCCGCTTCAGGAAGGAAGGAAGGA...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACACCTGTGCCACACCATaGGCCCCTCAGGATCACACC | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYTCATP*APQDHT Trigger: GGTGTGATCCTGAGGGGCTCATGGTGTGGCACAGGT...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGTCAGGGCTGTTTCATTTAGCTTCATGATAACCACCTTTGCTCTGGGATCAATTTCAGCCACATaGCATGCAACAGGGGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: HKVRAVSFSFMITTFALGSISAT*HATGGW Trigger: CCAGCCCCCTGTTGCATGCCATGTGGCTGAAATTGA...TCCCAGAGCAAAGGTGGTTATCATGAAGCTAAATGAAACAGCCCTGACCTTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 90 bp | TCTGATTATAGCTGGTTGTGGGCCACACCATGTGGTTGCTGGGAATaGAACTCAGAACCTCTGGAAGAACAGTCAGTTCTCTTAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SDYSWLWATPCGCWE*NSEPLEEQSVLLTS Trigger: AGAGGTTAAGAGAACTGACTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGCTATAATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGGATGGGACACTGAGGTaGAATCCGAAGGCTCCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKDGTLR*NPKAPE Trigger: CTCTGGAGCCTTCGGATTTCACCTCAGTGTCCCATC...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCTGCTATGGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATGGAATCTCTACCTCAGGGGCATaGCCATCTCCAGTATTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PSAMDRSSCVSLDPQNGISTSGA*PSPVLS Trigger: TGACAATACTGGAGATGGGCATGCCCCTGAGGTAGA...GATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCCATAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACCTTCACCTTGCTTCCTaGCCTTCCTTCCTGACCAGT | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYLHLAS*PSFLTS Trigger: ACTGGTCAGGAAGGAAGGTCAGGAAGCAAGGTGAAG...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACCTAGGAGGTGGGCTTTaGGGTCTCAAAAGCTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYLGGGL*GLKSSH Trigger: GTGTGAGCTTTTGAGACCTCAAAGCCCACCTCCTAG...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTTCTGCTATGGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATGGAATCCACGCACACGTGCTATaGAAACACATACCCATACTC | + |
|
Preference number: 2 (lower is better) Translates to: PSAMDRSSCVSLDPQNGIHAHVL*KHIPIL Trigger: GAGTATGGGTATGTGTTTGCATAGCACGTGTGCGTG...GATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCCATAGCAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGCATAAAACTGACCTGTaGCACACCATGAGCCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKHKTDL*HTMSPS Trigger: TGAGGGGCTCATGGTGTGGCACAGGTCAGTTTTATG...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACCTCCAGCACCATGTCTaGCTACATGCTGCAGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYLQHHV*LHAAVL Trigger: AAGCACTGCAGCATGTAGGCAGACATGGTGCTGGAG...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | TGCTCTTACCCACTGAGCCACCTCGCCAGCCCGAACTTTGACCTTTTAAGTACAATGATTCAAGTACCATaGTTTGACTCAATAAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: CSYPLSHLASPNFDLLSTMIQVP*FDSIRV Trigger: AACCCTTATTGAGTCAAACCATGGTACTTGAATCAT...TGTACTTAAAAGGTCAAAGTTCGGGCTGGCGAGGTGGCTCAGTGGGTAAGAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGAGTAAAAGGCACCTGTaGCCCAGCCTGACAACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKSKRHL*PSLTTL Trigger: TAAGGTTGTCAGGCTGGGCCACAGGTGCCTTTTACT...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 90 bp | GAGCTGAGAGAAATATTAGCAAGTAATGCCCACTGGCAGTTGCACTaGCTCCTTCATTCTTTTGCTTCCTTGGCTCAGCTCAAAAATCTT | + |
|
Preference number: 2 (lower is better) Translates to: ELREILASNAHWQLH*LLHSFASLAQLKNL Trigger: AAGATTTTTGAGCTGAGCCAAGGAAGCAAAAGAATGAAGGAGCAAGTGCAACTGCCAGTGGGCATTACTTGCTAATATTTCTCTCAGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACAGGCTCCAGAGCACCTaGCACCTTTTTCTTGCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYRLQST*HLFLAV Trigger: TACAGCAAGAAAAAGGTGGCAGGTGCTCTGGAGCCT...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 90 bp | AATGCCCACTGGCAGTTGCACTTGCTCCTTCATTCTTTTGCTTCCTaGGCTCAGCTCAAAAATCTTCTTGTAACTGTAATTTCTGTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: NAHWQLHLLLHSFAS*AQLKNLLVTVISVL Trigger: CAAGACAGAAATTACAGTTACAAGAAGATTTTTGAGCTGAGCCAAGGAAGCAAAAGAATGAAGGAGCAAGTGCAACTGCCAGTGGGCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGTACATAGCAGGATTGTaGTCTTCACTGGCAATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKYIAGL*SSLAMW Trigger: CCACATTGCCAGTGAAGACCACAATCCTGCTATGTA...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | CATAAGGTCAGGGCTGTTTCATTTAGCTTCATGATAACCACCTTTGCTCTGGGAAGTGCATTTATCTTGTaGTATTTGTTTGCTGACCCC | + |
|
Preference number: 2 (lower is better) Translates to: HKVRAVSFSFMITTFALGSAFIL*YLFADP Trigger: GGGGTCAGCAAACAAATACCACAAGATAAATGCACT...TCCCAGAGCAAAGGTGGTTATCATGAAGCTAAATGAAACAGCCCTGACCTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGGAGTTGCCATTGTCATaGTGTCTCTTCACAGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKELPLS*CLFTAV Trigger: TACTGCTGTGAAGAGACACCATGACAATGGCAACTC...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACCAACACATTACACACTaGAGTCCCACATACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYQHITH*SPTYTH Trigger: GTGTGTGTATGTGGGACTTCAGTGTGTAATGTGTTG...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACTCTACTGTGGTAGTTTaGATAAAAATGGCCCCATCG | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYSTVVV*IKMAPS Trigger: CGATGGGGCCATTTTTATTCAAACTACCACAGTAGA...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACTGGTCAGTTTTAAGCTaGATTCCTTTGGACATAGTG | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYWSVLS*IPLDIV Trigger: CACTATGTCCAAAGGAATTCAGCTTAAAACTGACCA...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGCTTCCTAATGCCTGTTaGTTAAAATGTAGAACTCTC | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKLPNAC*LKCRTL Trigger: GAGAGTTCTACATTTTAATCAACAGGCATTAGGAAG...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGCTAATATGTAAAACCTaGAAGTTTCTAGAACAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKLICKT*KFLEQW Trigger: CCACTGTTCTAGAAACTTGCAGGTTTTACATATTAG...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACGAGACATCTACTTACTaGTTTCTTTTGATAGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYETSTY*FLLIVL Trigger: CAGCACTATCAAAAGAAACCAGTAAGTAGATGTCTC...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | CCTTCACCTTGCTTCCTGACCTTCCTTCCTGACCAGTaGAACAAACTGTTCTGGTCCTCCCGTGCCCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: PSPCFLTFLPDQ*NKLFWSSRAPS Trigger: TGATGGGGCACGGGAGGACCAGAACAGTTTGTTTCACTGGTCAGGAAGGAAGGTCAGGAAGCAAGGTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | AGCAGCAGCAGGCAGCGAATGTGGTGGATTTTGGCATaGGTGATAGTGAGTAGACAGAGCCAGCAAAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSSRQRMWWILA*VIVSRQSQQRW Trigger: CCACCTTTGCTGGCTCTGTCTACTCACTATCACCCATGCCAAAATCCACCACATTCGCTGCCTGCTGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | CAGGGCAATGCAAGCAGCAGCAGGCAGCGAATGTGGTaGATTTTGGCATGGGTGATAGTGAGTAGACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QGNASSSRQRMW*ILAWVIVSRQS Trigger: GCTCTGTCTACTCACTATCACCCATGCCAAAATCCACCACATTCGCTGCCTGCTGCTGCTTGCATTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR GCA 72 bp | CTACGCCCATGCCTGGATCATTCTACCTCAGGGGCATaGCCATCTCCAGTATTGTCATCACCTGGGAAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: LRPCLDHSTSGA*PSPVLSSPGKL Trigger: TAACTTCCCAGGTGATGACAATACTGGAGATGGGCATGCCCCTGAGGTAGAATGATCCAGGCATGGGCGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR GCA 72 bp | CTCTCAGCTTTTTCTCCAGCACCATGTCTGCCTACATaGTGCAGTGCTTCCCACCATGATAGGGGACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSAFSPAPCLPT*CSASHHDRGLN Trigger: GTTCAGTCCCCTATCATGGTGGGAAGCACTGCAGCATGTAGGCAGACATGGTGCTGGAGAAAAAGCTGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | GATCAGGGCAATGCAAGCAGCAGCAGGCAGCGAATGTaGTGGATTTTGGCATGGGTGATAGTGAGTAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: DQGNASSSRQRM*WILAWVIVSRQ Trigger: CTGTCTACTCACTATCACCCATGCCAAAATCCACCACATTCGCTGCCTGCTGCTGCTTGCATTGCCCTGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | GCTGGTTGTGGGCCACACCATGTGGTTGCTGGGAATTaGACTCAGAACCTCTGGAAGAACAGTCAGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AGCGPHHVVAGN*TQNLWKNSQFS Trigger: AGAGAACTGACTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | AGGTGTGGCTTTGTTGGAGGAAGTGTCACTAGGAGGTaGGCTTTGAGGTCTCAAAAGCTCACACCAGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: RCGFVGGSVTRR*ALRSQKLTPVV Trigger: GACAACTGGTGTGAGCTTTTGAGACCTCAAAGCCCACCTCCTAGTGACACTTCCTCCAACAAAGCCACACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | AAAAGGCACCTGTGGCCCAGCCTGACAACCTTATTTTaGTGGCTAGGACCTGATAGGACCAACACTGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KRHLWPSLTTLF*WLGPDRTNTVE Trigger: TTCCACAGTGTTGGTCCTATCAGGTCCTAGCCATCAAAATAAGGTTGTCAGGCTGGGCCACAGGTGCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | CCAGAAGAGGGAGTCAGTTCTTGTTACAGATGGTTGTaGGCCACCATGTGGTTGCTGGGATTTGAACTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PEEGVSSCYRWL*ATMWLLGFELW Trigger: CCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAACTGACTCCCTCTTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | TTCAGCCACATGGCATGCAACAGGGGGCTGGAGAGATaGCTTCATGGTCTAAGAGTACTTTCTGCCCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: FSHMACNRGLER*LHGLRVLSALV Trigger: TACAAGGGCAGAAAGTACTCTTAGACCATGAAGTCATCTCTCCAGCCCCCTGTTGCATGCCATGTGGCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | AAACAATACACAGGGGGCCAAGAACCAAGTGGGCTGTaGGAGGTTTCCCTTCTGCTATGGACAGGAGTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: KQYTGGQEPSGL*EVSLLLWTGVH Trigger: ATGAACTCCTGTCCATAGCAGAAGGGAAACCTCTCACAGCCCACTTGGTTCTTGGCCCCCTGTGTATTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR GCA 72 bp | AAGCAAAATCCATCAGGCCTCCGTTACAGCCCTGATTaGCTTGAGCGTGAGAACAGTCCACAAGGTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: KQNPSGLRYSPD*LERENSPQGSV Trigger: AACAGAACCTTGTGGACTGTTCTCACGCTCAAGGCAATCAGGGCTGTAACGGAGGCCTGATGGATTTTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| 3UTR CCA 72 bp | CTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTaGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: LVTDGCEPPCGC*DLNSGPLEEQS Trigger: CGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | GCCCTGTCAGCTGAACTGAAGGCACGCTCTGGGCCTTaGAAAATCCAGTATTTCCTCTTTAGTCTCCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: ALSAELKARSGP*KIQYFLFSLPF Trigger: AAAAGGGAGACTAAAGAGGAAATACTGGATTTTCCAAGGCCCAGAGCGTGCCTTCAGTTCAGCTGACAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | AAACACAAAACAATACACAGGGGGCCAAGAACCAAGTaGGCTGTGAGAGGTTTCCCTTCTGCTATGGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: KHKTIHRGPRTK*AVRGFPSAMDR Trigger: CCTGTCCATAGCAGAAGGGAAACCTCTCACAGCCCACTTGGTTCTTGGCCCCCTGTGTATTGTTTTGTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | TCCTCCGAGTCCAGACCTCCATTTTCCTTAATGTACTaGAAAGCAAAATCCATCAGGCCTCCGTTACAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSESRPPFSLMY*KAKSIRPPLQP Trigger: GGGCTGTAACGGAGGCCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAATGGAGGTCTGGACTCGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| 3UTR GCA 72 bp | GTTCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTaGTGGGATTTGAACTCTGGACCTTTGGAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLVTDGCEPPCG*WDLNSGPLEEQ Trigger: CTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR GCA 72 bp | TCTGATTATAGCTGGTTGTGGGCCACACCATGTGGTTaGTGGGAATTGAACTCAGAACCTCTGGAAGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: SDYSWLWATPCG*WELNSEPLEEQ Trigger: CTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGCTATAATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | GATTATAGCTGGTTGTGGGCCACACCATGTGGTTGCTaGGAATTGAACTCAGAACCTCTGGAAGAACAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DYSWLWATPCGC*ELNSEPLEEQS Trigger: TGACTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGCTATAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGGCATCAGCCTTCACCTaGCTTCCTGACCTTCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKASAFT*LPDLPS Trigger: GGAAGGAAGGTCAGGAAGCAAGGTGAAGGCTGATGC...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | ATTGGGAATAATGTCAGCCTACAGCCCACCTGTGTATaGCCCTTTCTAGAACTACATAGCAGGATTGTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: IGNNVSLQPTCV*PFLELHSRIVV Trigger: GACCACAATCCTGCTATGTAGTTCTAGAAAGGGCCATACACAGGTGGGCTGTAGGCTGACATTATTCCCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | CATAAGGTCAGGGCTGTTTCATTTAGCTTCATGATAACCACCTTTGCTCTGGGACACTGTGGAACTGAGTaGTTCTCTGAACTCCACACA | + |
|
Preference number: 3 (lower is better) Translates to: HKVRAVSFSFMITTFALGHCGTE*FSELHT Trigger: TGTGTGGAGTTCAGAGAACAACTCAGTTCCACAGTG...TCCCAGAGCAAAGGTGGTTATCATGAAGCTAAATGAAACAGCCCTGACCTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCTGCTATGGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATGGAATCCAGGAGGACCCAAGTTaGGATCCTCTAGAACTGACA | + |
|
Preference number: 3 (lower is better) Translates to: PSAMDRSSCVSLDPQNGIQEDPS*DPLELT Trigger: TGTCAGTTCTAGAGGATCCAAACTTGGGTCCTCCTG...GATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCCATAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | GCCTATCAGGGCCAAGGAGTTTCTACTGTGGTAGTTTaGATAAAAATGGCCCCATCGGCACTAGTATTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: AYQGQGVSTVVV*IKMAPSALVLL Trigger: CAACAATACTAGTGCCGATGGGGCCATTTTTATTCAAACTACCACAGTAGAAACTCCTTGGCCCTGATAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | AACTACATAGCAGGATTGTGGTCTTCACTGGCAATGTaGACAGGCACTACTGAAACTAGCACTTCAACCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NYIAGLWSSLAM*TGTTETSTSTF Trigger: GAAGGTTGAAGTGCTAGTTTCAGTAGTGCCTGTCCACATTGCCAGTGAAGACCACAATCCTGCTATGTAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | TTATCCCAAGCTAGATTCACTAACACATACCTAATCTaGTGGGACACTGAGGTGAAATCCGAAGGCTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSQARFTNTYLI*WDTEVKSEGSR Trigger: TCTGGAGCCTTCGGATTTCACCTCAGTGTCCCATCAGATTAGGTATGTGTTAGTGAATCTAGCTTGGGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGAGAGGGAGTCAGTTCTaGTTACAGATGGTTGTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKRGSQF*LQMVVS Trigger: GCTCACAACCATCTGTAACAAGAACTGACTCCCTCT...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | ATGCTGAAGTGCATTTATCTTGTGGTATTTGTTTGCTaGCCCCAACATGGCAGAGAGATCGAGTCTTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: MLKCIYLVVFVC*PQHGREIESFL Trigger: CAGAAAAGACTCGATCTCTCTGCCATGTTGGGGTCAGCAAACAAATACCACAAGATAAATGCACTTCAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | GGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATaGAATCCCAACACAACCAGGTGTCATAGAAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GQEFMCLIRSSK*NPNTTRCHRKN Trigger: GTTCTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CCA 72 bp | AAGAACCATACTTACTGGACAGAGACATCTACTTACTaGTTTCTTTTGATAGTGCTGTTTGCCCTGTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: KNHTYWTETSTY*FLLIVLFALSA Trigger: AGCTGACAGGGCAAACAGCACTATCAAAAGAAACCAGTAAGTAGATGTCTCTGTCCAGTAAGTATGGTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACAGCGCTGTGACTCCTTaGACAAACCTCTATTTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYSAVTP*TNLYFQ Trigger: TTGGAAATAGAGGTTTGTCAAAGGAGTCACAGCGCT...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACACTTACTGGTTTCTTTaGATAGTGCTGTTTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYTYWFL*IVLFAL Trigger: CAGGGCAAACAGCACTATCAAAAGAAACCAGTAAGT...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR GCA 72 bp | CTTTTGAAGTTGGATCAAGTGCATTTAGCTATCAAATaGATGATAGCTATAAGCCTATCAGGGCCAAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LLKLDQVHLAIK*MIAISLSGPRS Trigger: ACTCCTTGGCCCTGATAGGCTTATAGCTATCATGCATTTGATAGCTAAATGCACTTGATCCAACTTCAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACTTCTACTGTGGTAGTTaGAATAAAAATGGCCCCATC | + |
|
Preference number: 3 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYFYCGS*NKNGPI Trigger: GATGGGGCCATTTTTATTCAAACTACCACAGTAGAA...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | TGGTTTGACTCAATAAGGGTTTGGTCAGTTTTAAGCTaGATTCCTTTGGACATAGTGTCCATAAGTCCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WFDSIRVWSVLS*IPLDIVSISPH Trigger: ATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACCCTTATTGAGTCAAACCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | ATGACTTGGATCCTCAATGATTCAAGTACCATGGTTTaGCTCAATAAGGGTTTGGTCAGTTTTAAGCTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: MTWILNDSSTMV*LNKGLVSFKLN Trigger: ATTCAGCTTAAAACTGACCAAACCCTTATTGAGTCAAACCATGGTACTTGAATCATTGAGGATCCAAGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | TATTTAGTCCCGAACATTTGTCAACACATTACACACTaGAGTCCCACATACACACACACTGAGCTAAAATTT | + |
|
Preference number: 3 (lower is better) Translates to: YLVPNICQHITH*SPTYTHTELKF Trigger: AAATTTTAGCTCAGTGTGTGTGTATGTGGGACTTCAGTGTGTAATGTGTTGACAAATGTTCGGGACTAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR TCA 72 bp | AAAGTAGCAAGGCAGAGGGCATACAAACGGTATAATTaGAATGCTGAAGTGCATTTATCTTGTGGTATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KVARQRAYKRYN*NAEVHLSCGIC Trigger: ACAAATACCACAAGATAAATGCACTTCAGCATTTCAATTATACCGTTTGTATGCCCTCTGCCTTGCTACTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | GCCAGCAAAGGTGGCATGCTGTGGAGGGTGGCTACATaGTCCAAGCTCTGCCATATGGGAGCAGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASKGGMLWRVAT*SKLCHMGAGGS Trigger: GCTGCCACCTGCTCCCATATGGCAGAGCTTGGACAATGTAGCCACCCTCCACAGCATGCCACCTTTGCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | ACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTaGAACTCTGGACCTTTGGAAGAGCAGTCGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGCEPPCGCWD*NSGPLEEQSGA Trigger: AGCACCCGACTGCTCTTCCAAAGGTCCAGAGTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | AGCTGGTTGTGGGCCACACCATGTGGTTGCTGGGAATaGAACTCAGAACCTCTGGAAGAACAGTCAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SWLWATPCGCWE*NSEPLEEQSVL Trigger: GAGAACTGACTGTTCTTCCAGAGGTTCTGAGTTCAATTCCCAGCAACCACATGGTGTGGCCCACAACCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTACCCACTGAGCCACCTCGCCAGCCCGAACTTTGACCTTTTAAGTACACATTCACCACCTGCCTaGATTCCTCATTGGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: CSYPLSHLASPNFDLLSTHSPPA*IPHWSC Trigger: ACATGACCAATGAGGAATTCAGGCAGGTGGTGAATG...TGTACTTAAAAGGTCAAAGTTCGGGCTGGCGAGGTGGCTCAGTGGGTAAGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | TGTCATTCCTGGGTAGCATGGGGTTTCTCAGGCCAATaGGGAATAATGTCAGCCTACAGCCCACCTGTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CHSWVAWGFSGQ*GIMSAYSPPVY Trigger: ATACACAGGTGGGCTGTAGGCTGACATTATTCCCAATTGGCCTGAGAAACCCCATGCTACCCAGGAATGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | GCTGTCTTCAGACACACCAGAAGAGGGAGTCAGTTCTaGTTACAGATGGTTGTGAGCCACCATGTGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRHTRRGSQF*LQMVVSHHVVA Trigger: AGCAACCACATGGTGGCTCACAACCATCTGTAACAAGAACTGACTCCCTCTTCTGGTGTGTCTGAAGACAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | GGCTTTGTTGGAGGAAGTGTCACTAGGAGGTGGGCTTaGAGGTCTCAAAAGCTCACACCAGTTGTCTTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: GFVGGSVTRRWA*RSQKLTPVVFL Trigger: TAGGAAGACAACTGGTGTGAGCTTTTGAGACCTCAAAGCCCACCTCCTAGTGACACTTCCTCCAACAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | AAAATCCATCAGGCCTCCGTTACAGCCCTGATTGCCTaGAGCGTGAGAACAGTCCACAAGGTTCTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KIHQASVTALIA*SVRTVHKVLFT Trigger: AGTGAACAGAACCTTGTGGACTGTTCTCACGCTCAAGGCAATCAGGGCTGTAACGGAGGCCTGATGGATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCGACCCGCACTGGCCCTaGTTCTTCACAGGAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPDPHWP*FFTGVT Trigger: TGTGACTCCTGTGAAGAACCAGGGCCAGTGCGGGTC...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCTGCTATGGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATGGAATCGACCCGCACTGGCCCTaGTTCTTCACAGGAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: PSAMDRSSCVSLDPQNGIDPHWP*FFTGVT Trigger: TGTGACTCCTGTGAAGAACCAGGGCCAGTGCGGGTC...GATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCCATAGCAGAAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCGATAGCTGGCCGCGGTaGCAAGTCCACAGTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPDSWPR*QVHSGC Trigger: ACAACCACTGTGGACTTGCCACCGCGGCCAGCTATC...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCTCGCCACAGCCTTCATaGGGGCTTTCTCTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPSPQPS*GLSLAE Trigger: CTCAGCAAGAGAAAGCCCTCATGAAGGCTGTGGCGA...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | CCATTTTCCTTAATGTACTGGAAAGCAAAATCCATCAGGCCTCCGTTACAGCCCACAGTCTTCTGTGTGTaGACTTCCACTGGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PFSLMYWKAKSIRPPLQPTVFCV*TSTGAT Trigger: AGTGGCACCAGTGGAAGTCCACACACAGAAGACTGT...GGGCTGTAACGGAGGCCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCAGCATCAGCGGTTCCTaGAAAAGCCTCCCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPSISGS*KSLPFL Trigger: CAAGAAGGGGAGGCTTTTTCAGGAACCGCTGATGCT...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | TGCTCTTACCCACTGAGCCACCTCGCCAGCCCGAACTTTGACCTTTTAAGTACATTCATAGTAGATGCCTaGACTATAGAACTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CSYPLSHLASPNFDLLSTFIVDA*TIELER Trigger: TCTCTCCAGTTCTATAGTTCAGGCATCTACTATGAA...TGTACTTAAAAGGTCAAAGTTCGGGCTGGCGAGGTGGCTCAGTGGGTAAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | CATAAGGTCAGGGCTGTTTCATTTAGCTTCATGATAACCACCTTTGCTCTGGGAAACTGGAGAGACGGATaGCTTGCGTCCATAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: HKVRAVSFSFMITTFALGNWRDG*LASIAT Trigger: TGTTGCTATGGACGCAAGCCATCCGTCTCTCCAGTT...TCCCAGAGCAAAGGTGGTTATCATGAAGCTAAATGAAACAGCCCTGACCTTATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCTGCTATGGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATGGAATCCGTTACAGCCCTGATTaGCTTGAGCGTGAGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAMDRSSCVSLDPQNGIRYSPD*LERENS Trigger: ACTGTTCTCACGCTCAAGGCAATCAGGGCTGTAACG...GATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCCATAGCAGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCACAGTCTTCTGTGTGTaGACTTCCACTGGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPTVFCV*TSTGAT Trigger: AGTGGCACCAGTGGAAGTCCACACACAGAAGACTGT...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | GAAATATTAGCAAGTAATGCCCACTGGCAGTTGCACTaGCTCCTTCATTCTTTTGCTTCCTTGGCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: EILASNAHWQLH*LLHSFASLAQL Trigger: GAGCTGAGCCAAGGAAGCAAAAGAATGAAGGAGCAAGTGCAACTGCCAGTGGGCATTACTTGCTAATATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCCATTCACCACCTGCCTaGATTCCTCATTGGTCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPHSPPA*IPHWSC Trigger: ACATGACCAATGAGGAATTCAGGCAGGTGGTGAATG...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCATACAAACGGTATAATTGAAATGCTGAAGTGCATTTATCTTGTGGTATCGCCACAGCCTTCATaGGGGCTTTCTCTTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGHTNGIIEMLKCIYLVVSPQPS*GLSLAE Trigger: CTCAGCAAGAGAAAGCCCTCATGAAGGCTGTGGCGA...TACCACAAGATAAATGCACTTCAGCATTTCAATTATACCGTTTGTATGCCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR GCA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCACGTTACAGCCCTGATTaGCTTGAGCGTGAGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSRYSPD*LERENS Trigger: ACTGTTCTCACGCTCAAGGCAATCAGGGCTGTAACG...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCAAACTGGAGAGACGGATaGCTTGCGTCCATAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSNWRDG*LASIAT Trigger: TGTTGCTATGGACGCAAGCCATCCGTCTCTCCAGTT...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | CTGAGAGAAATATTAGCAAGTAATGCCCACTGGCAGTaGCACTTGCTCCTTCATTCTTTTGCTTCCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LREILASNAHWQ*HLLLHSFASLA Trigger: AGCCAAGGAAGCAAAAGAATGAAGGAGCAAGTGCAACTGCCAGTGGGCATTACTTGCTAATATTTCTCTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCATACAAACGGTATAATTGAAATGCTGAAGTGCATTTATCTTGTGGTAAGCATCAGCGGTTCCTaGAAAAGCCTCCCCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGHTNGIIEMLKCIYLVVSISGS*KSLPFL Trigger: CAAGAAGGGGAGGCTTTTTCAGGAACCGCTGATGCT...TACCACAAGATAAATGCACTTCAGCATTTCAATTATACCGTTTGTATGCCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | TGTAACTTCTTGCTAGTGCTCTGGACAGGAGACAAACAAAACACAAAACAATACACAGTCTTCTGTGTGTaGACTTCCACTGGTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: CNFLLVLWTGDKQNTKQYTVFCV*TSTGAT Trigger: AGTGGCACCAGTGGAAGTCCACACACAGAAGACTGT...GTATTGTTTTGTGTTTTGTTTGTCTCCTGTCCAGAGCACTAGCAAGAAGTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | CATAAGGTCAGGGCTGTTTCATTTAGCTTCATGATAACCACCTTTGCTCTGGGATCTGCACTAAAGGTTTaGTCAAATTTTGGAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HKVRAVSFSFMITTFALGSALKV*SNFGVA Trigger: AGCTACTCCAAAATTTGATCAAACCTTTAGTGCAGA...TCCCAGAGCAAAGGTGGTTATCATGAAGCTAAATGAAACAGCCCTGACCTTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | TCCATTTTCCTTAATGTACTGGAAAGCAAAATCCATCAGGCCTCCGTTACAGCCTCTGCACTAAAGGTTTaGTCAAATTTTGGAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SIFLNVLESKIHQASVTASALKV*SNFGVA Trigger: AGCTACTCCAAAATTTGATCAAACCTTTAGTGCAGA...GGCTGTAACGGAGGCCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCTTCATAGTAGATGCCTaGACTATAGAACTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPFIVDA*TIELER Trigger: TCTCTCCAGTTCTATAGTTCAGGCATCTACTATGAA...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR TCA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATCTGCACTAAAGGTTTaGTCAAATTTTGGAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSSALKV*SNFGVA Trigger: AGCTACTCCAAAATTTGATCAAACCTTTAGTGCAGA...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTTTCCTTAATGTACTaGAAAGCAAAATCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSFSLMY*KAKSIR Trigger: CCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAA...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTCATTAGATCCTCAAAATGGAATCCCAACACAACCAGGTGTCATAGAAAGTTTTCCTTAATGTACTaGAAAGCAAAATCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLIRSSKWNPNTTRCHRKFSLMY*KAKSIR Trigger: CCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAA...CTTTCTATGACACCTGGTTGTGTTGGGATTCCATTTTGAGGATCTAATGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| 3UTR CAA 72 bp | TTTACTTTGATTTTCCAGGGGTTTACAGTTAAGAGATaGCATGAGTCTCAAAGAGACTCTGAACTTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: FTLIFQGFTVKR*HESQRDSELQT Trigger: AGTTTGAAGTTCAGAGTCTCTTTGAGACTCATGCAATCTCTTAACTGTAAACCCCTGGAAAATCAAAGTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | TCCATTTTCCTTAATGTACTGGAAAGCAAAATCCATCAGGCCTCCGTTACAGCCAAGCCGTGCTGCCCGTaGCTGTATTCCCCGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SIFLNVLESKIHQASVTAKPCCP*LYSPLC Trigger: ACACAACGGGGAATACAGCAACGGGCAGCACGGCTT...GGCTGTAACGGAGGCCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAATGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| CDS GCA 90 bp | CATAGCCATAGCCCACCAACAGAACCCCATGGTCGAGGTTCTTGCTaGTACAGTTGGGTTCATAGTAGATGCCTGAACTATAGAACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSHSPPTEPHGRGSC*YSWVHSRCLNYRTG Trigger: TCCAGTTCTATAGTTCAGGCATCTACTATGAACCCAACTGTAGCAGCAAGAACCTCGACCATGGGGTTCTGTTGGTGGGCTATGGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 ENSMUST00000222971.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCAAGCCGTGCTGCCCGTaGCTGTATTCCCCGTTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPKPCCP*LYSPLC Trigger: ACACAACGGGGAATACAGCAACGGGCAGCACGGCTT...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCAACAGCCCTGATTGCCTaGAGCGTGAGAACAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSTALIA*SVRTVH Trigger: GTGGACTGTTCTCACGCTCAAGGCAATCAGGGCTGT...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCGCAAGTCCACAGTGGTaGTCCCGGTCTTTGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPASPQW*SRSLAI Trigger: AATAGCCAAAGACCGGGACAACCACTGTGGACTTGC...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCAGCAAGTCCACAGTGGTaGTCCCGGTCTTTGGCTATT | + |
|
Preference number: 5 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSASPQW*SRSLAI Trigger: AATAGCCAAAGACCGGGACAACCACTGTGGACTTGC...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCATACAAACGGTATAATTGAAATGCTGAAGTGCATTTATCTTGTGGTAACAGCCCTGATTGCCTaGAGCGTGAGAACAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RGHTNGIIEMLKCIYLVVTALIA*SVRTVH Trigger: GTGGACTGTTCTCACGCTCAAGGCAATCAGGGCTGT...TACCACAAGATAAATGCACTTCAGCATTTCAATTATACCGTTTGTATGCCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | CCATTTTCCTTAATGTACTGGAAAGCAAAATCCATCAGGCCTCCGTTACAGCCCCTCTGCACTAAAGGTTaGATCAAATTTTGGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PFSLMYWKAKSIRPPLQPLCTKG*IKFWSS Trigger: GCTACTCCAAAATTTGATCAAACCTTTAGTGCAGAG...GGGCTGTAACGGAGGCCTGATGGATTTTGCTTTCCAGTACATTAAGGAAAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000223494.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCATTACCGCTACCCCTTCCCCAGCTGTTCTaGACAAGCCAATATTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: FKLNSFGHSVHKSSLPLPLPQLF*TSQYLF Trigger: GAATAAATATTGGCTTGTCAAGAACAGCTGGGGAAG...GGGTAGCGGTAATGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCTGCTATGGACAGGAGTTCATGTGTCTCATTAGATCCTCAAAATGGAATCCTCTGCACTAAAGGTTaGATCAAATTTTGGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSAMDRSSCVSLDPQNGILCTKG*IKFWSS Trigger: GCTACTCCAAAATTTGATCAAACCTTTAGTGCAGAG...GATTCCATTTTGAGGATCTAATGAGACACATGAACTCCTGTCCATAGCAGAAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCACTTCCCCAGCTGTTCTaGACAAGCCAATATTTATTC | + |
|
Preference number: 5 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSLPQLF*TSQYLF Trigger: GAATAAATATTGGCTTGTCAAGAACAGCTGGGGAAG...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS-3UTR CAA 90 bp | GGTTTGGTCAGTTTTAAGCTGAATTCCTTTGGACATAGTGTCCATAAGTCCTCACTCTGCACTAAAGGTTaGATCAAATTTTGGAGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLVSFKLNSFGHSVHKSSLCTKG*IKFWSS Trigger: GCTACTCCAAAATTTGATCAAACCTTTAGTGCAGAG...TGAGGACTTATGGACACTATGTCCAAAGGAATTCAGCTTAAAACTGACCAAACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 |
||
| CDS GCA 72 bp | AGCCCACCAACAGAACCCCATGGTCGAGGTTCTTGCTaGTACAGTTGGGTTCATAGTAGATGCCTGAACTAT | + |
|
Preference number: 6 (lower is better) Translates to: SPPTEPHGRGSC*YSWVHSRCLNY Trigger: ATAGTTCAGGCATCTACTATGAACCCAACTGTAGCAGCAAGAACCTCGACCATGGGGTTCTGTTGGTGGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021933.8 ENSMUST00000222517.2 ENSMUST00000222971.2 |
||