RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CTSG (Mus musculus)

Ensembl gene IDs: ENSMUSG00000040314

Ensembl transcript IDs: ENSMUST00000015583.2

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp CCATCTGCACTCTTAGCTGCACCTCCTGGAGTACATTTGTTCCCCTaGTCTGGCTTACCCGGCCCCAGCCAGCCACTGTGCACAAATCCC +
Preference number: 5 (lower is better)
Translates to: PSALLAAPPGVHLFP*SGLPGPSQPLCTNP
Trigger: GGGATTTGTGCACAGTGGCTGGCTGGGGCCGGGTAAGCCAGAGCAGGGGAACAAATGTACTCCAGGAGGTGCAGCTAAGAGTGCAGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 90 bp CGATTGGCGCACATTTGGTCCATCTGCACTCTTAGCTGCACCTCCTaGAGTACATTTGTTCCCCTGCTCTGGCTTACCCGGCCCCAGCCA +
Preference number: 5 (lower is better)
Translates to: RLAHIWSICTLSCTS*STFVPLLWLTRPQP
Trigger: TGGCTGGGGCCGGGTAAGCCAGAGCAGGGGAACAAATGTACTCCAGGAGGTGCAGCTAAGAGTGCAGATGGACCAAATGTGCGCCAATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 90 bp TTCCCACACAGATCTGAGTCTGGCTGTTGTAGAACTGGAAGCGATTaGCGCACATTTGGTCCATCTGCACTCTTAGCTGCACCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: FPHRSESGCCRTGSD*RTFGPSALLAAPPG
Trigger: TCCAGGAGGTGCAGCTAAGAGTGCAGATGGACCAAATGTGCGCCAATCGCTTCCAGTTCTACAACAGCCAGACTCAGATCTGTGTGGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 90 bp GGTGCAAAGCGTCTCATTGTTCTTTTGATCCAGGGCATGAAGCTCTaGATTTTGGTGAATACAGCTGGAGGGTTACCATTGTTGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GAKRLIVLLIQGMKL*ILVNTAGGLPLLLP
Trigger: TGGAAGCAACAATGGTAACCCTCCAGCTGTATTCACCAAAATCCAGAGCTTCATGCCCTGGATCAAAAGAACAATGAGACGCTTTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CAA 72 bp CCATCTGCACTCTTAGCTGCACCTCCTGGAGTACATTaGTTCCCCTGCTCTGGCTTACCCGGCCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: PSALLAAPPGVH*FPCSGLPGPSQ
Trigger: CTGGCTGGGGCCGGGTAAGCCAGAGCAGGGGAACAAATGTACTCCAGGAGGTGCAGCTAAGAGTGCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CAA 90 bp ACATTTGGTCCATCTGCACTCTTAGCTGCACCTCCTGGAGTACATTaGTTCCCCTGCTCTGGCTTACCCGGCCCCAGCCAGCCACTGTGC +
Preference number: 6 (lower is better)
Translates to: TFGPSALLAAPPGVH*FPCSGLPGPSQPLC
Trigger: GCACAGTGGCTGGCTGGGGCCGGGTAAGCCAGAGCAGGGGAACAAATGTACTCCAGGAGGTGCAGCTAAGAGTGCAGATGGACCAAATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS GCA 72 bp TTCACCGATCCACTCCTCCGGGCTCTGCGCCTCAGCTaGAGAAGCATGATGTCATTCCGGATGTTCTGCGGA +
Preference number: 6 (lower is better)
Translates to: FTDPLLRALRLS*RSMMSFRMFCG
Trigger: TCCGCAGAACATCCGGAATGACATCATGCTTCTGCAGCTGAGGCGCAGAGCCCGGAGGAGTGGATCGGTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS GCA 72 bp TCAGGATGGCGGATGGCTCTGAGCACTGTGATGAGTTaGTGGGTCCTTTCTCGCATTTGGATGTTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: SGWRMALSTVMS*WVLSRIWMLWA
Trigger: GGCCCACAACATCCAAATGCGAGAAAGGACCCAGCAACTCATCACAGTGCTCAGAGCCATCCGCCATCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 72 bp CACATTTGGTCCATCTGCACTCTTAGCTGCACCTCCTaGAGTACATTTGTTCCCCTGCTCTGGCTTACCCGG +
Preference number: 6 (lower is better)
Translates to: HIWSICTLSCTS*STFVPLLWLTR
Trigger: CCGGGTAAGCCAGAGCAGGGGAACAAATGTACTCCAGGAGGTGCAGCTAAGAGTGCAGATGGACCAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CAA 72 bp ATCAGGATGGCGGATGGCTCTGAGCACTGTGATGAGTaGCTGGGTCCTTTCTCGCATTTGGATGTTGTGGGC +
Preference number: 6 (lower is better)
Translates to: IRMADGSEHCDE*LGPFSHLDVVG
Trigger: GCCCACAACATCCAAATGCGAGAAAGGACCCAGCAACTCATCACAGTGCTCAGAGCCATCCGCCATCCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 72 bp TCTCGGCCTCCAATGATCTTCCCTGCCTCATCTCCTTaGAGTAGAATAAAGGTCAACAGGAGCAGGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SRPPMIFPASSP*SRIKVNRSRRG
Trigger: GCCTCTCCTGCTCCTGTTGACCTTTATTCTACTCCAAGGAGATGAGGCAGGGAAGATCATTGGAGGCCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS TCA 72 bp GCCCCTAGAGTAACATTTATGGAGCTTCCCAAGCAATaGGCTGCTGTTAGGACGAAGTCTTCTCGCACCAGA +
Preference number: 6 (lower is better)
Translates to: APRVTFMELPKQ*AAVRTKSSRTR
Trigger: TCTGGTGCGAGAAGACTTCGTCCTAACAGCAGCTCATTGCTTGGGAAGCTCCATAAATGTTACTCTAGGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 72 bp AGATCTGAGTCTGGCTGTTGTAGAACTGGAAGCGATTaGCGCACATTTGGTCCATCTGCACTCTTAGCTGCA +
Preference number: 6 (lower is better)
Translates to: RSESGCCRTGSD*RTFGPSALLAA
Trigger: TGCAGCTAAGAGTGCAGATGGACCAAATGTGCGCCAATCGCTTCCAGTTCTACAACAGCCAGACTCAGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 72 bp CCAGGGCATGAAGCTCTGGATTTTGGTGAATACAGCTaGAGGGTTACCATTGTTGCTTCCATAGGAGACGAT +
Preference number: 6 (lower is better)
Translates to: PGHEALDFGEYS*RVTIVASIGDD
Trigger: ATCGTCTCCTATGGAAGCAACAATGGTAACCCTCCAGCTGTATTCACCAAAATCCAGAGCTTCATGCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS GCA 72 bp CTGAGACAGGGAGTTAGCAGGTCTCTGATATCTTGGTaGAAAGCGTCTCATTGTTCTTTTGATCCAGGGCAT +
Preference number: 6 (lower is better)
Translates to: LRQGVSRSLISW*KASHCSFDPGH
Trigger: ATGCCCTGGATCAAAAGAACAATGAGACGCTTTGCACCAAGATATCAGAGACCTGCTAACTCCCTGTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2
CDS CCA 72 bp CGTCTCATTGTTCTTTTGATCCAGGGCATGAAGCTCTaGATTTTGGTGAATACAGCTGGAGGGTTACCATTG +
Preference number: 6 (lower is better)
Translates to: RLIVLLIQGMKL*ILVNTAGGLPL
Trigger: CAATGGTAACCCTCCAGCTGTATTCACCAAAATCCAGAGCTTCATGCCCTGGATCAAAAGAACAATGAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000015583.2