Pregenerated sensors for CTSD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000007891Ensembl transcript IDs: ENSMUST00000066401.7, ENSMUST00000151120.9
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTTGCTTCTGTCCTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTaGCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCC | + |
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Preference number: 1 (lower is better) Translates to: FCFCPLAPSCSPSGL*QARVGGAVERGAIP Trigger: GGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAGGACAGAAGCAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR CCA 90 bp | GCAGCTATTAAACCAGTAGGGGCCTTTGAAGGCAGCCTCGTGTACTaGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCAATCT | + |
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Preference number: 1 (lower is better) Translates to: AAIKPVGAFEGSLVY*VGLGLLQTGRGQQS Trigger: AGATTGCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGCCTTCAAAGGCCCCTACTGGTTTAATAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR TCA 90 bp | CTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCCCAGGATaGGGGCAGCAGAGGCCAGCCAAAACCAGTCAGTCATCCTACCTC | + |
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Preference number: 1 (lower is better) Translates to: LYLYFNFGSQLPSPG*GQQRPAKTSQSSYL Trigger: GAGGTAGGATGACTGACTGGTTTTGGCTGGCCTCTGCTGCCCTCATCCTGGGCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCGGGCAGGTGGAGGGATaGGGCTGGCTGGCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: FRPLPGQSWRGSRTWCHPGQVEG*GWLASS Trigger: AGAGGAAGCCAGCCAGCCCCATCCCTCCACCTGCCC...GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GAACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACATGTGAGTGGGGCAGGTaGAGGGATGGGGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EQNSWTSSSQVSPKGPATCEWGR*RDGAGW Trigger: CCAGCCAGCCCCATCCCTCCACCTGCCCCACTCACA...TGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | GCAGCCTCGTGTACTGGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCTCCTCTACTGGACTCTaGTCCAGTTCCCTGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: AASCTGWALASFRQAEGSSSTGL*SSSLTV Trigger: CACTGTCAGGGAACTGGATCAGAGTCCAGTAGAGGA...GCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATGTGGAGGGATGGGGCTaGCTGGCTTCCTCTACTGGA | + |
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Preference number: 2 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDVEGWG*LASSTG Trigger: TCCAGTAGAGGAAGCCAGCCAGCCCCATCCCTCCAC...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGTGACTATGTGTGAGTaGGGCAGGTGGAGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: GGAVERGAIPKLGDGSGSVTMCE*GRWRDG Trigger: CCCATCCCTCCACCTGCCCCACTCACACATAGTCAC...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATAGGGATGGGGCTGGCTaGCTTCCTCTACTGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDRDGAG*LPLLDS Trigger: AGAGTCCAGTAGAGGAAGCCAGCCAGCCCCATCCCT...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGAGGGATGGGGCTGGCTaGCTTCCTCTACTGGACTCT | + |
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Preference number: 2 (lower is better) Translates to: LLLLPAHLQAFARPELEGRDGAG*LPLLDS Trigger: AGAGTCCAGTAGAGGAAGCCAGCCAGCCCCATCCCT...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | TTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCGTGACTATGTGTGAGTaGGGCAGGTGGAGGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: FRPLPGQSWRGSRTWCHPVTMCE*GRWRDG Trigger: CCCATCCCTCCACCTGCCCCACTCACACATAGTCAC...GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGGCTGGCTTCCTCTACTaGACTCTGATCCAGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GLCQARVGGAVERGAIPKAGFLY*TLIQFP Trigger: AGGGAACTGGATCAGAGTCCAGTAGAGGAAGCCAGC...CTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAACAGAACAGAACAGCTaGACAAGCTCCAGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: GGAVERGAIPKLGDGSGSTEQNS*TSSSQV Trigger: GACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTCTGT...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR CAA 90 bp | GTTTTGCTTCTGTCCTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTaGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: VLLLSSCSFLLTFRP*PGQSWRGSRTWCHP Trigger: GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAGGACAGAAGCAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATTCCTCTACTGGACTCTaGTCCAGTTCCCTGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDSSTGL*SSSLTV Trigger: CACTGTCAGGGAACTGGATCAGAGTCCAGTAGAGGA...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGAATCTGAACCCAGGGTaGGGAACCACAGAACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: GLCQARVGGAVERGAIPKNLNPG*GTTEQN Trigger: GTTCTGTTCTGTGGTTCCTCACCCTGGGTTCAGATT...CTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATACAGAACAGAACAGCTaGACAAGCTCCAGCCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDTEQNS*TSSSQV Trigger: GACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTCTGT...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATAACACTAAGCGAGTGTaGCTATGTGTGAGTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDNTKRV*LCVSGA Trigger: TGCCCCACTCACACATAGTCACACTCGCTTAGTGTT...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | GAACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACAGCTGGCTTCCTCTACTaGACTCTGATCCAGTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: EQNSWTSSSQVSPKGPATAGFLY*TLIQFP Trigger: AGGGAACTGGATCAGAGTCCAGTAGAGGAAGCCAGC...TGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR GCA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTATCCTAAGACCCATTTaGCTGCTTCAGAGTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: RVGGAVERGAIPKLGDGSILRPI*LLQSTA Trigger: GGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGAT...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCTGTGAGTGGGGCAGGTaGAGGGATGGGGCTGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSCEWGR*RDGAGW Trigger: CCAGCCAGCCCCATCCCTCCACCTGCCCCACTCACA...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCCATCCCCAAGCTGGGTaGTGGGTCTGGGTCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSHPQAG*WVWVRA Trigger: TGCTCTGACCCAGACCCATCACCCAGCTTGGGGATG...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCACCAGTAGGGGCCTTTaGAGGCAGCCTCGTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSTSRGL*RQPRVL Trigger: CAGTACACGAGGCTGCCTTCAAAGGCCCCTACTGGT...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCAACACTAAGCGAGTGTaGCTATGTGTGAGTGGGGCA | + |
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Preference number: 2 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSNTKRV*LCVSGA Trigger: TGCCCCACTCACACATAGTCACACTCGCTTAGTGTT...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR GCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCATCCTAAGACCCATTTaGCTGCTTCAGAGTACTGCC | + |
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Preference number: 2 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSILRPI*LLQSTA Trigger: GGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGAT...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CAA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTTGTACTGGGTGGGCCTaGGCCTCCTTCAGACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RVGGAVERGAIPKLGDGSCTGWA*ASFRQA Trigger: TGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACA...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR CCA 72 bp | TTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTaGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCT | + |
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Preference number: 3 (lower is better) Translates to: FLLTFRPLPGQS*RGSRTWCHPQA Trigger: AGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR-3UTR CAA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGGATCCTAAGACCCATTaGCCTGCTTCAGAGTACTGC | + |
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Preference number: 3 (lower is better) Translates to: LLLLPAHLQAFARPELEGDPKTH*PASEYC Trigger: GCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATC...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR GCA 72 bp | CAGAGCAGGTTTCTGGGAGGGATCCTAAGACCCATTTaGCTGCTTCAGAGTACTGCCCACACAGCAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: QSRFLGGILRPI*LLQSTAHTAKG Trigger: GCCCTTTGCTGTGTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCTCCCAGAAACCTGCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| 3UTR GCA 72 bp | AGGGATCCTAAGACCCATTTGCCTGCTTCAGAGTACTaGCCACACAGCAAAGGGCGGCAGGACAAGACAATC | + |
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Preference number: 3 (lower is better) Translates to: RDPKTHLPASEY*PHSKGRQDKTI Trigger: GATTGTCTTGTCCTGCCGCCCTTTGCTGTGTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CCA 90 bp | GCAGCCTCGTGTACTGGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCTCCAGAGCGGCCCACTaGGAGGGGGTATGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: AASCTGWALASFRQAEGSSRAAH*EGVCPF Trigger: GAATGGACATACCCCCTCCCAGTGGGCCGCTCTGGA...GCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAACGACTGTGAAACACTaGGGCGGGGTTCCGATGCCG | + |
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Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSTTVKH*GGVPMP Trigger: CGGCATCGGAACCCCGCCGCAGTGTTTCACAGTCGT...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CCA 90 bp | GGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGGAGGCACTGCCCCGATaGCCTTCTGCAGCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GLCQARVGGAVERGAIPKEALPR*PSAAPS Trigger: TGAAGGAGCTGCAGAAGGCCATCGGGGCAGTGCCTC...CTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGGCACTGCCCCGATaGCCTTCTGCAGCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSEALPR*PSAAPS Trigger: TGAAGGAGCTGCAGAAGGCCATCGGGGCAGTGCCTC...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGCGGCGGGGTTCCGATaGCGATATCGCCATAGTACT | + |
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Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSAAGFR*RYRHST Trigger: AGTACTATGGCGATATCGGCATCGGAACCCCGCCGC...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | GGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCCTCACAGCCTCCCTTaGACAGGGTCAGCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: GLCQARVGGAVERGAIPKPHSLP*TGSAHC Trigger: GCAATGAGCTGACCCTGTGCAAGGGAGGCTGTGAGG...CTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCACCTCACAGCCTCCCTTaGACAGGGTCAGCTCATTGC | + |
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Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSPHSLP*TGSAHC Trigger: GCAATGAGCTGACCCTGTGCAAGGGAGGCTGTGAGG...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CCA 90 bp | TTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCTCCAGAGCGGCCCACTaGGAGGGGGTATGTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: FRPLPGQSWRGSRTWCHPSRAAH*EGVCPF Trigger: GAATGGACATACCCCCTCCCAGTGGGCCGCTCTGGA...GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | GCAGCCTCGTGTACTGGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCAGCCCATGCCCAAGATaGCATCAAACTTGGCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: AASCTGWALASFRQAEGSSPCPR*HQTWLQ Trigger: TTGCAGCCAAGTTTGATGGCATCTTGGGCATGGGCT...GCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGCCCCGATGGCCTTCTaGAGCTCCTTCACCTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: RVGGAVERGAIPKLGDGSAPMAF*SSFTSS Trigger: GGAAGAGGTGAAGGAGCTGCAGAAGGCCATCGGGGC...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR GCA 90 bp | TTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCTGGATAAGAGGCACTaGCCCGATGGCCTTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FRPLPGQSWRGSRTWCHPLDKRH*PDGLLQ Trigger: CTGCAGAAGGCCATCGGGGCAGTGCCTCTTATCCAG...GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CCA 90 bp | GCAGCCTCGTGTACTGGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCCGATTCCAGGCTGCTTaGTGGCTTCTCCAAAGATCT | + |
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Preference number: 4 (lower is better) Translates to: AASCTGWALASFRQAEGSRFQAA*WLLQRS Trigger: AGATCTTTGGAGAAGCCACCAAGCAGCCTGGAATCG...GCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CCA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGTTGCCCACCTCCAACTaGTCCATGTGCACCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LLLLPAHLQAFARPELEGLPTSN*SMCTCQ Trigger: CTGGCAGGTGCACATGGACCAGTTGGAGGTGGGCAA...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151120.9 |
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| 3UTR CAA 72 bp | CTGTCCTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTaGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSSCSFLLTFRP*PGQSWRGSRTW Trigger: CCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR TCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATCCCAGAGAGGCTTCCTaGGCCGTAGTGGATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDPREAS*AVVDVK Trigger: TTTGACATCCACTACGGCTCAGGAAGCCTCTCTGGG...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCAGACCGTGGGCAGGCTaGACACCTTCTCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FRPLPGQSWRGSRTWCHPRPWAG*TPSHKE Trigger: TTCCTTGTGAGAAGGTGTCCAGCCTGCCCACGGTCT...GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR TCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCATCAAGTATCTTGCAATaGATGGAGGGGACCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSSSILQ*MEGTHR Trigger: CCTGTGGGTCCCCTCCATTCATTGCAAGATACTTGA...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACTAAGCGAGTGTGACACCGATACAGTGTCCTaGCTCAGGTACCCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSSQVSPKGPATLSECDTDTVS*LRYPER Trigger: CCTCTCTGGGTACCTGAGCCAGGACACTGTATCGGT...GTCACACTCGCTTAGTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTAGACCGTGGGCAGGCTaGACACCTTCTCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVGGAVERGAIPKLGDGSRPWAG*TPSHKE Trigger: TTCCTTGTGAGAAGGTGTCCAGCCTGCCCACGGTCT...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR TCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATTCAAGTATCTTGCAATaGATGGAGGGGACCCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDSSILQ*MEGTHR Trigger: CCTGTGGGTCCCCTCCATTCATTGCAAGATACTTGA...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR TCA 90 bp | AACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACAGTAGGCCTTTCGAGTaGCGTTCAGGTAGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRTAGQAPARSPPRVQQHSRPFE*RSGRTA Trigger: AGCTGTCCTACCTGAACGTCACTCGAAAGGCCTACT...GTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAAATACGATTCCAGGCTaGTTGGTGGCTTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSNTIPG*LVASPK Trigger: CTTTGGAGAAGCCACCAAGCAGCCTGGAATCGTATT...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCATATGAGGGTAGCCCATaGCCAAGATGCCATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSYEGSP*PRCHQT Trigger: AGTTTGATGGCATCTTGGGCATGGGCTACCCTCATA...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGTCCACCAGCTTCTGTTaGATCAGGTTGTCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: GLCQARVGGAVERGAIPKSTSFC*IRLSKT Trigger: GGTCTTTGACAACCTGATGCAACAGAAGCTGGTGGA...CTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGGGAGGGATCCTAAGACCCATTTGCCTGCTTCAGAGTACTGCCCACGCCCCGATGGCCTTCTaGAGCTCCTTCACCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFLGGILRPICLLQSTAHAPMAF*SSFTSS Trigger: GGAAGAGGTGAAGGAGCTGCAGAAGGCCATCGGGGC...GTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCTCCCAGAAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCACTGTTGTACTTATGGTaGACCCAGCAGGCTATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSLLYLW*TQQAMS Trigger: TGACATAGCCTGCTGGGTCCACCATAAGTACAACAG...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGTATGTCCATTCCCATaGAGCCACTCAGGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGGAVERGAIPKLGDGSVCPFP*SHSGRL Trigger: CAATCTGCCTGAGTGGCTTCATGGGAATGGACATAC...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATGTCTTAGGCGATGACTaGATGGAGTACTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDVLGDD*MEYLVM Trigger: CATCACCAAGTACTCCATGCAGTCATCGCCTAAGAC...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGGGAGGGATCCTAAGACCCATTTGCCTGCTTCAGAGTACTGCCCACGCGGCGGGGTTCCGATaGCGATATCGCCATAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: RFLGGILRPICLLQSTAHAAGFR*RYRHST Trigger: AGTACTATGGCGATATCGGCATCGGAACCCCGCCGC...GTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCTCCCAGAAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATAATACGATTCCAGGCTaGTTGGTGGCTTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDNTIPG*LVASPK Trigger: CTTTGGAGAAGCCACCAAGCAGCCTGGAATCGTATT...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GAACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACAAGCCCATGCCCAAGATaGCATCAAACTTGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EQNSWTSSSQVSPKGPATSPCPR*HQTWLQ Trigger: TTGCAGCCAAGTTTGATGGCATCTTGGGCATGGGCT...TGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTTCTGGGAGGGATCCTAAGACCCATTTGCCTGCTTCAGAGTACTGCCCACCTGGATAAGAGGCACTaGCCCGATGGCCTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RFLGGILRPICLLQSTAHLDKRH*PDGLLQ Trigger: CTGCAGAAGGCCATCGGGGCAGTGCCTCTTATCCAG...GTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCTCCCAGAAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTTCTGGGAGGGATCCTAAGACCCATTTGCCTGCTTCAGAGTACTGCCCACCCCAGAGAGGCTTCCTaGGCCGTAGTGGATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RFLGGILRPICLLQSTAHPREAS*AVVDVK Trigger: TTTGACATCCACTACGGCTCAGGAAGCCTCTCTGGG...GTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCTCCCAGAAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | AACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACGTCTTAGGCGATGACTaGATGGAGTACTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NRTAGQAPARSPPRVQQHVLGDD*MEYLVM Trigger: CATCACCAAGTACTCCATGCAGTCATCGCCTAAGAC...GTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GAACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACATCCACCAGCTTCTGTTaGATCAGGTTGTCAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: EQNSWTSSSQVSPKGPATSTSFC*IRLSKT Trigger: GGTCTTTGACAACCTGATGCAACAGAAGCTGGTGGA...TGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | AACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACCTGGTCAGACTTACATaGAACCGATACAGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: NRTAGQAPARSPPRVQQHLVRLT*NRYSVL Trigger: CAGGACACTGTATCGGTTCCATGTAAGTCTGACCAG...GTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTCTGGTCAGACTTACATaGAACCGATACAGTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVGGAVERGAIPKLGDGSLVRLT*NRYSVL Trigger: CAGGACACTGTATCGGTTCCATGTAAGTCTGACCAG...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGTAGTTCATAGTTTTTaGCTCCTAGCTTCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGAVERGAIPKLGDGSGSVVHSF*LLASGR Trigger: TCTACCTGAAGCTAGGAGGCAAAAACTATGAACTAC...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGATTGTCTTTCCACCCTaGGATACCTTGAGTATATAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLLPAHLQAFARPELEGIVFPP*DTLSIY Trigger: GTATATACTCAAGGTATCGCAGGGTGGAAAGACAAT...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACTAAGCGAGTGTGACTCTTCACATAGGTGCTaGACTTGTCACTGTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TSSSQVSPKGPATLSECDSSHRC*TCHCCT Trigger: AGTACAACAGTGACAAGTCCAGCACCTATGTGAAGA...GTCACACTCGCTTAGTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | GAACAGAACAGCTGGACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACATCTTCACATAGGTGCTaGACTTGTCACTGTTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EQNSWTSSSQVSPKGPATSSHRC*TCHCCT Trigger: AGTACAACAGTGACAAGTCCAGCACCTATGTGAAGA...TGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGTCCAGCTGTTCTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACTAAGCGAGTGTGACGTAGTTCATAGTTTTTaGCTCCTAGCTTCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSSQVSPKGPATLSECDVVHSF*LLASGR Trigger: TCTACCTGAAGCTAGGAGGCAAAAACTATGAACTAC...GTCACACTCGCTTAGTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | ACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACTAAGCGAGTGTGACATTGTCTTTCCACCCTaGGATACCTTGAGTATATAC | + |
|
Preference number: 4 (lower is better) Translates to: TSSSQVSPKGPATLSECDIVFPP*DTLSIY Trigger: GTATATACTCAAGGTATCGCAGGGTGGAAAGACAAT...GTCACACTCGCTTAGTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCTATGAGGGTAGCCCATaGCCAAGATGCCATCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSYEGSP*PRCHQT Trigger: AGTTTGATGGCATCTTGGGCATGGGCTACCCTCATA...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CCA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCCTGTTGTACTTATGGTaGACCCAGCAGGCTATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSLLYLW*TQQAMS Trigger: TGACATAGCCTGCTGGGTCCACCATAAGTACAACAG...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACTAAGCGAGTGTGACGCCTCACAGCCTCCCTaGCACAGGGTCAGCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: TSSSQVSPKGPATLSECDASQPP*HRVSSL Trigger: CAATGAGCTGACCCTGTGCAAGGGAGGCTGTGAGGC...GTCACACTCGCTTAGTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCGTGTACTGGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCAAGGAGAAGATGTTCTaGTCCACCAGCTTCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AASCTGWALASFRQAEGSKEKMF*STSFCC Trigger: GCAACAGAAGCTGGTGGACAAGAACATCTTCTCCTT...GCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | GCAGCCTCGTGTACTGGGTGGGCCTTGGCCTCCTTCAGACAGGCAGAGGGCAGCAAGCCGACCCTATTGTaGTCTCTGTCAAACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AASCTGWALASFRQAEGSKPTLL*SLSNTV Trigger: CACTGTGTTTGACAGAGACAACAATAGGGTCGGCTT...GCTGCCCTCTGCCTGTCTGAAGGAGGCCAAGGCCCACCCAGTACACGAGGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS TCA 90 bp | CCACCTCCAACTGGTCCATGTGCACCTGCCAGTAGGCCTTTCGAGTaGCGTTCAGGTAGGACAGCTCCCCGTGGTAGTACTTGGAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PPPTGPCAPASRPFE*RSGRTAPRGSTWSQ Trigger: CTGACTCCAAGTACTACCACGGGGAGCTGTCCTACCTGAACGTCACTCGAAAGGCCTACTGGCAGGTGCACATGGACCAGTTGGAGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGACTGCATGGAGTACTaGGTGATGGGGCCTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVGGAVERGAIPKLGDGSDCMEY*VMGPLR Trigger: CCTCAAAGGCCCCATCACCAAGTACTCCATGCAGTC...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGACGATTCCAGGCTGCTaGGTGGCTTCTCCAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLPAHLQAFARPELEGTIPGC*VASPKI Trigger: GATCTTTGGAGAAGCCACCAAGCAGCCTGGAATCGT...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGTCCACCAGCTTCTGTaGCATCAGGTTGTCAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGAVERGAIPKLGDGSGSVHQLL*HQVVKD Trigger: GTCTTTGACAACCTGATGCAACAGAAGCTGGTGGAC...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS TCA 90 bp | ACAGGGTCAGCTCATTGCCCACCTCCAACCAGTAGGCCTTTCGAGTaGCGTTCAGGTAGGACAGCTCCCCGTGGTAGTACTTGGAGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: TGSAHCPPPTSRPFE*RSGRTAPRGSTWSQ Trigger: CTGACTCCAAGTACTACCACGGGGAGCTGTCCTACCTGAACGTCACTCGAAAGGCCTACTGGTTGGAGGTGGGCAATGAGCTGACCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066401.7 |
||
| CDS-3UTR CAA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAAAGGAGAAGATGTTCTaGTCCACCAGCTTCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGAVERGAIPKLGDGSGSKEKMF*STSFCC Trigger: GCAACAGAAGCTGGTGGACAAGAACATCTTCTCCTT...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS GCA 90 bp | CACCTTCTCACAAGGAATCATATACTCACCCTGGATAAGAGGCACTaGCCCGATGGCCTTCTGCAGCTCCTTCACCTCTTCCACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLLTRNHILTLDKRH*PDGLLQLLHLFHRP Trigger: GGGCCTGTGGAAGAGGTGAAGGAGCTGCAGAAGGCCATCGGGGCAGTGCCTCTTATCCAGGGTGAGTATATGATTCCTTGTGAGAAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCGGATAGATGTGAACTaGCGCAGAGGGATTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: FRPLPGQSWRGSRTWCHPRIDVN*RRGILI Trigger: TATCAGAATCCCTCTGCGCAAGTTCACATCTATCCG...GGGATGGCACCACGTTCTACTGCCCCTCCAACTCTGGCCTGGCAAAGGCCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
||
| CDS-3UTR CAA 90 bp | GCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAGAGCAGGTTTCTGGGAGGGATCGGATAGATGTGAACTaGCGCAGAGGGATTCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: AIPKLGDGSGSEQVSGRDRIDVN*RRGILI Trigger: TATCAGAATCCCTCTGCGCAAGTTCACATCTATCCG...ATCCCTCCCAGAAACCTGCTCTGACCCAGACCCATCACCCAGCTTGGGGATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | AGAGTTGGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGTCCACCAGCTTCTGTaGCATCAGGTTGTCAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: RVGGAVERGAIPKLGDGSVHQLL*HQVVKD Trigger: GTCTTTGACAACCTGATGCAACAGAAGCTGGTGGAC...AGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCCAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGAAGCCGACCCTATTGTaGTCTCTGTCAAACACAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLLPAHLQAFARPELEGKPTLL*SLSNTV Trigger: CACTGTGTTTGACAGAGACAACAATAGGGTCGGCTT...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS TCA 90 bp | TGGAACCGATACAGTGTCCTGGCTCAGGTACCCAGAGAGGCTTCCTaGGCCGTAGTGGATGTCAAAGGACGTGCCGTTCTTCACATAGGT | + |
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Preference number: 5 (lower is better) Translates to: WNRYSVLAQVPREAS*AVVDVKGRAVLHIG Trigger: ACCTATGTGAAGAACGGCACGTCCTTTGACATCCACTACGGCTCAGGAAGCCTCTCTGGGTACCTGAGCCAGGACACTGTATCGGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | CTCTTGCTCCTTCCTGCTCACCTTCAGGCCTTTGCCAGGCCAGAGTTGGAGGGGATCTGTTTCTCCACCTaGATACCTCTTGCCTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: LLLLPAHLQAFARPELEGICFST*IPLAFD Trigger: GTCAAAGGCAAGAGGTATCAAGGTGGAGAAACAGAT...CCCCTCCAACTCTGGCCTGGCAAAGGCCTGAAGGTGAGCAGGAAGGAGCAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | AGGTTTCTGGGAGGGATCCTAAGACCCATTTGCCTGCTTCAGAGTACTGCCCACACGATTCCAGGCTGCTaGGTGGCTTCTCCAAAGATC | + |
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Preference number: 5 (lower is better) Translates to: RFLGGILRPICLLQSTAHTIPGC*VASPKI Trigger: GATCTTTGGAGAAGCCACCAAGCAGCCTGGAATCGT...GTGGGCAGTACTCTGAAGCAGGCAAATGGGTCTTAGGATCCCTCCCAGAAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | GGAGGGGCAGTAGAACGTGGTGCCATCCCCAAGCTGGGTGATGGGTCTGGGTCAAAGATGCCATCAAACTaGGCTGCAACAAATACGATT | + |
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Preference number: 5 (lower is better) Translates to: GGAVERGAIPKLGDGSGSKMPSN*AATNTI Trigger: AATCGTATTTGTTGCAGCCAAGTTTGATGGCATCTT...TGACCCAGACCCATCACCCAGCTTGGGGATGGCACCACGTTCTACTGCCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS GCA 90 bp | CTGAGCCGTAGTGGATGTCAAAGGACGTGCCGTTCTTCACATAGGTaGTGGACTTGTCACTGTTGTACTTATGGTGGACCCAGCAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: LSRSGCQRTCRSSHR*WTCHCCTYGGPSRL Trigger: TAGCCTGCTGGGTCCACCATAAGTACAACAGTGACAAGTCCAGCACCTATGTGAAGAACGGCACGTCCTTTGACATCCACTACGGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS GCA 90 bp | GGTACCCAGAGAGGCTTCCTGAGCCGTAGTGGATGTCAAAGGACGTaGCGTTCTTCACATAGGTGCTGGACTTGTCACTGTTGTACTTAT | + |
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Preference number: 5 (lower is better) Translates to: GTQRGFLSRSGCQRT*RSSHRCWTCHCCTY Trigger: ATAAGTACAACAGTGACAAGTCCAGCACCTATGTGAAGAACGGCACGTCCTTTGACATCCACTACGGCTCAGGAAGCCTCTCTGGGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CCA 90 bp | AGCCGTAGTGGATGTCAAAGGACGTGCCGTTCTTCACATAGGTGCTaGACTTGTCACTGTTGTACTTATGGTGGACCCAGCAGGCTATGT | + |
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Preference number: 5 (lower is better) Translates to: SRSGCQRTCRSSHRC*TCHCCTYGGPSRLC Trigger: ACATAGCCTGCTGGGTCCACCATAAGTACAACAGTGACAAGTCCAGCACCTATGTGAAGAACGGCACGTCCTTTGACATCCACTACGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | ACAAGCTCCAGCCAGGTCTCCCCCAAGGGTCCAGCAACACTAAGCGAGTGTGACAAGATGCCATCAAACTaGGCTGCAACAAATACGATT | + |
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Preference number: 5 (lower is better) Translates to: TSSSQVSPKGPATLSECDKMPSN*AATNTI Trigger: AATCGTATTTGTTGCAGCCAAGTTTGATGGCATCTT...GTCACACTCGCTTAGTGTTGCTGGACCCTTGGGGGAGACCTGGCTGGAGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCGCCTCACAGCCTCCCTaGCACAGGGTCAGCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSASQPP*HRVSSL Trigger: CAATGAGCTGACCCTGTGCAAGGGAGGCTGTGAGGC...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCCACAGGGTCAGCTCATaGCCCACCTCCAACTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSHRVSS*PTSNWS Trigger: GGACCAGTTGGAGGTGGGCAATGAGCTGACCCTGTG...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151120.9 |
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| CDS CCA 90 bp | CTGGGTGTAGTTCATAGTTTTTGCCTCCTAGCTTCAGGTAGACCGTaGGCAGGCTGGACACCTTCTCACAAGGAATCATATACTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: LGVVHSFCLLASGRP*AGWTPSHKESYTHP Trigger: AGGGTGAGTATATGATTCCTTGTGAGAAGGTGTCCAGCCTGCCCACGGTCTACCTGAAGCTAGGAGGCAAAAACTATGAACTACACCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS TCA 90 bp | GGCTTCTCCAAAGATCTGTTTCTCCACCTTGATACCTCTTGCCTTTaGCTGGTCAGACTTACATGGAACCGATACAGTGTCCTGGCTCAG | + |
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Preference number: 5 (lower is better) Translates to: GFSKDLFLHLDTSCL*LVRLTWNRYSVLAQ Trigger: CTGAGCCAGGACACTGTATCGGTTCCATGTAAGTCTGACCAGTCAAAGGCAAGAGGTATCAAGGTGGAGAAACAGATCTTTGGAGAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS-3UTR CAA 90 bp | CAAGGCCCAAAACAACTTTATTTGTATTTCAACTTTGGCTCCCAGCTGCCTAGCGACTGCATGGAGTACTaGGTGATGGGGCCTTTGAGG | + |
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Preference number: 5 (lower is better) Translates to: QGPKQLYLYFNFGSQLPSDCMEY*VMGPLR Trigger: CCTCAAAGGCCCCATCACCAAGTACTCCATGCAGTC...GCTAGGCAGCTGGGAGCCAAAGTTGAAATACAAATAAAGTTGTTTTGGGCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS GCA 90 bp | CCCAAGATGCCATCAAACTTGGCTGCAACAAATACGATTCCAGGCTaGTTGGTGGCTTCTCCAAAGATCTGTTTCTCCACCTTGATACCT | + |
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Preference number: 5 (lower is better) Translates to: PKMPSNLAATNTIPG*LVASPKICFSTLIP Trigger: AGGTATCAAGGTGGAGAAACAGATCTTTGGAGAAGCCACCAAGCAGCCTGGAATCGTATTTGTTGCAGCCAAGTTTGATGGCATCTTGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CCA 90 bp | TCTCCAAAGATCTGTTTCTCCACCTTGATACCTCTTGCCTTTGACTaGTCAGACTTACATGGAACCGATACAGTGTCCTGGCTCAGGTAC | + |
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Preference number: 5 (lower is better) Translates to: SPKICFSTLIPLAFD*SDLHGTDTVSWLRY Trigger: GTACCTGAGCCAGGACACTGTATCGGTTCCATGTAAGTCTGACCAGTCAAAGGCAAGAGGTATCAAGGTGGAGAAACAGATCTTTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS TCA 72 bp | AGAGCGGCCCACTGGGAGGGGGTATGTCCATTCCCATaGAGCCACTCAGGCAGATTGTCTTTCCACCCTGCG | + |
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Preference number: 6 (lower is better) Translates to: RAAHWEGVCPFP*SHSGRLSFHPA Trigger: CGCAGGGTGGAAAGACAATCTGCCTGAGTGGCTTCATGGGAATGGACATACCCCCTCCCAGTGGGCCGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 90 bp | TCTGACACTGGCTCCGTGGTCTTAGGCGATGACTGCATGGAGTACTaGGTGATGGGGCCTTTGAGGATCAGGTCTTCCACAGAGCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: SDTGSVVLGDDCMEY*VMGPLRIRSSTEPP Trigger: GGGCGGCTCTGTGGAAGACCTGATCCTCAAAGGCCCCATCACCAAGTACTCCATGCAGTCATCGCCTAAGACCACGGAGCCAGTGTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS TCA 72 bp | GCTCATTGCCCACCTCCAACCAGTAGGCCTTTCGAGTaGCGTTCAGGTAGGACAGCTCCCCGTGGTAGTACT | + |
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Preference number: 6 (lower is better) Translates to: AHCPPPTSRPFE*RSGRTAPRGST Trigger: AGTACTACCACGGGGAGCTGTCCTACCTGAACGTCACTCGAAAGGCCTACTGGTTGGAGGTGGGCAATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066401.7 |
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| CDS TCA 72 bp | ACTGGTCCATGTGCACCTGCCAGTAGGCCTTTCGAGTaGCGTTCAGGTAGGACAGCTCCCCGTGGTAGTACT | + |
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Preference number: 6 (lower is better) Translates to: TGPCAPASRPFE*RSGRTAPRGST Trigger: AGTACTACCACGGGGAGCTGTCCTACCTGAACGTCACTCGAAAGGCCTACTGGCAGGTGCACATGGACCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151120.9 |
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| CDS GCA 72 bp | GGTAGGACAGCTCCCCGTGGTAGTACTTGGAGTCAGTaGCACCAAGCATTAGTTCTCCTCCGGGTTGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GRTAPRGSTWSQ*HQALVLLRVAL Trigger: AAGGGCAACCCGGAGGAGAACTAATGCTTGGTGGCACTGACTCCAAGTACTACCACGGGGAGCTGTCCTACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS TCA 72 bp | TACAGTGTCCTGGCTCAGGTACCCAGAGAGGCTTCCTaGGCCGTAGTGGATGTCAAAGGACGTGCCGTTCTT | + |
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Preference number: 6 (lower is better) Translates to: YSVLAQVPREAS*AVVDVKGRAVL Trigger: AAGAACGGCACGTCCTTTGACATCCACTACGGCTCAGGAAGCCTCTCTGGGTACCTGAGCCAGGACACTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 72 bp | GGCTCCGTGGTCTTAGGCGATGACTGCATGGAGTACTaGGTGATGGGGCCTTTGAGGATCAGGTCTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: GSVVLGDDCMEY*VMGPLRIRSST Trigger: TGTGGAAGACCTGATCCTCAAAGGCCCCATCACCAAGTACTCCATGCAGTCATCGCCTAAGACCACGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS GCA 72 bp | AACTCTGACACTGGCTCCGTGGTCTTAGGCGATGACTaGATGGAGTACTTGGTGATGGGGCCTTTGAGGATC | + |
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Preference number: 6 (lower is better) Translates to: NSDTGSVVLGDD*MEYLVMGPLRI Trigger: GATCCTCAAAGGCCCCATCACCAAGTACTCCATGCAGTCATCGCCTAAGACCACGGAGCCAGTGTCAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 72 bp | CCCACCTCCGTCATAGTCCGACGGATAGATGTGAACTaGCGCAGAGGGATTCTGATAATCGCGAAGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PTSVIVRRIDVN*RRGILIIAKED Trigger: GTCCTCCTTCGCGATTATCAGAATCCCTCTGCGCAAGTTCACATCTATCCGTCGGACTATGACGGAGGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS GCA 72 bp | AGAGGCTTCCTGAGCCGTAGTGGATGTCAAAGGACGTaGCGTTCTTCACATAGGTGCTGGACTTGTCACTGT | + |
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Preference number: 6 (lower is better) Translates to: RGFLSRSGCQRT*RSSHRCWTCHC Trigger: ACAGTGACAAGTCCAGCACCTATGTGAAGAACGGCACGTCCTTTGACATCCACTACGGCTCAGGAAGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CCA 72 bp | GGATGTCAAAGGACGTGCCGTTCTTCACATAGGTGCTaGACTTGTCACTGTTGTACTTATGGTGGACCCAGC | + |
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Preference number: 6 (lower is better) Translates to: GCQRTCRSSHRC*TCHCCTYGGPS Trigger: GCTGGGTCCACCATAAGTACAACAGTGACAAGTCCAGCACCTATGTGAAGAACGGCACGTCCTTTGACATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS GCA 72 bp | AGTGGATGTCAAAGGACGTGCCGTTCTTCACATAGGTaGTGGACTTGTCACTGTTGTACTTATGGTGGACCC | + |
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Preference number: 6 (lower is better) Translates to: SGCQRTCRSSHR*WTCHCCTYGGP Trigger: GGGTCCACCATAAGTACAACAGTGACAAGTCCAGCACCTATGTGAAGAACGGCACGTCCTTTGACATCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CCA 72 bp | GTTCATAGTTTTTGCCTCCTAGCTTCAGGTAGACCGTaGGCAGGCTGGACACCTTCTCACAAGGAATCATAT | + |
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Preference number: 6 (lower is better) Translates to: VHSFCLLASGRP*AGWTPSHKESY Trigger: ATATGATTCCTTGTGAGAAGGTGTCCAGCCTGCCCACGGTCTACCTGAAGCTAGGAGGCAAAAACTATGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 90 bp | ATTCCAGGCTGCTTGGTGGCTTCTCCAAAGATCTGTTTCTCCACCTaGATACCTCTTGCCTTTGACTGGTCAGACTTACATGGAACCGAT | + |
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Preference number: 6 (lower is better) Translates to: IPGCLVASPKICFST*IPLAFDWSDLHGTD Trigger: ATCGGTTCCATGTAAGTCTGACCAGTCAAAGGCAAGAGGTATCAAGGTGGAGAAACAGATCTTTGGAGAAGCCACCAAGCAGCCTGGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 90 bp | CCTGTTCAGGTAGAAGGAGAAGATGTTCTTGTCCACCAGCTTCTGTaGCATCAGGTTGTCAAAGACCGGAAGCACGTTGTTAACAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: PVQVEGEDVLVHQLL*HQVVKDRKHVVNRD Trigger: ATCTCTGTTAACAACGTGCTTCCGGTCTTTGACAACCTGATGCAACAGAAGCTGGTGGACAAGAACATCTTCTCCTTCTACCTGAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS TCA 72 bp | GCTTGGTGGCTTCTCCAAAGATCTGTTTCTCCACCTTaGTACCTCTTGCCTTTGACTGGTCAGACTTACATG | + |
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Preference number: 6 (lower is better) Translates to: AWWLLQRSVSPP*YLLPLTGQTYM Trigger: CATGTAAGTCTGACCAGTCAAAGGCAAGAGGTATCAAGGTGGAGAAACAGATCTTTGGAGAAGCCACCAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 72 bp | TCAAACTTGGCTGCAACAAATACGATTCCAGGCTGCTaGGTGGCTTCTCCAAAGATCTGTTTCTCCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: SNLAATNTIPGC*VASPKICFSTL Trigger: CAAGGTGGAGAAACAGATCTTTGGAGAAGCCACCAAGCAGCCTGGAATCGTATTTGTTGCAGCCAAGTTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 72 bp | GTAGAAGGAGAAGATGTTCTTGTCCACCAGCTTCTGTaGCATCAGGTTGTCAAAGACCGGAAGCACGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: VEGEDVLVHQLL*HQVVKDRKHVV Trigger: AACAACGTGCTTCCGGTCTTTGACAACCTGATGCAACAGAAGCTGGTGGACAAGAACATCTTCTCCTTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 90 bp | AAGATGCCATCAAACTTGGCTGCAACAAATACGATTCCAGGCTGCTaGGTGGCTTCTCCAAAGATCTGTTTCTCCACCTTGATACCTCTT | + |
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Preference number: 6 (lower is better) Translates to: KMPSNLAATNTIPGC*VASPKICFSTLIPL Trigger: AAGAGGTATCAAGGTGGAGAAACAGATCTTTGGAGAAGCCACCAAGCAGCCTGGAATCGTATTTGTTGCAGCCAAGTTTGATGGCATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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| CDS CAA 72 bp | AAGATGTTCTTGTCCACCAGCTTCTGTTGCATCAGGTaGTCAAAGACCGGAAGCACGTTGTTAACAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: KMFLSTSFCCIR*SKTGSTLLTEI Trigger: TATCTCTGTTAACAACGTGCTTCCGGTCTTTGACAACCTGATGCAACAGAAGCTGGTGGACAAGAACATCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066401.7 ENSMUST00000151120.9 |
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