Pregenerated sensors for CTSC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030560Ensembl transcript IDs: ENSMUST00000032779.12, ENSMUST00000128791.2, ENSMUST00000131108.9
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTGTTTTTCTGACACAGATCCTGAAGTCTGGCCTCAGGTCCTCTTaGTTGCACAGCAAGCAATTGGCAGGTGATGAATCTTCACACTCC | + |
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Preference number: 1 (lower is better) Translates to: LVFLTQILKSGLRSS*LHSKQLAGDESSHS Trigger: GGAGTGTGAAGATTCATCACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATCTGTGTCAGAAAAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR TCA 90 bp | AGAGGTGTGTTCTTACAAGTGGGCTTTGAGGTTTCAGAAGCTACGTaGTTCCCAGTTAGCTCTCTCTGCCTAGTGGTTGCGGATGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: RGVFLQVGFEVSEAT*FPVSSLCLVVADED Trigger: ATCTTCATCCGCAACCACTAGGCAGAGAGAGCTAACTGGGAATCACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGAACACACCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR GCA 90 bp | ACAGTGGTGATTACTGTTTTCCAAGAAATCCTTCAGGAGGGCAGTTaGCTTGAAGGTAGGTCACCAGGACTCCTCTGCATTTTACATGCA | + |
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Preference number: 1 (lower is better) Translates to: TVVITVFQEILQEGS*LEGRSPGLLCILHA Trigger: TGCATGTAAAATGCAGAGGAGTCCTGGTGACCTACCTTCAAGGCAACTGCCCTCCTGAAGGATTTCTTGGAAAACAGTAATCACCACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR TCA 90 bp | TTCCTTTATTCTTTGCAGTTTCTGGTGGTTCACATTCCACAGTGGTaGTTACTGTTTTCCAAGAAATCCTTCAGGAGGGCAGTTGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: FLYSLQFLVVHIPQW*LLFSKKSFRRAVAL Trigger: CAAGGCAACTGCCCTCCTGAAGGATTTCTTGGAAAACAGTAATCACCACTGTGGAATGTGAACCACCAGAAACTGCAAAGAATAAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CCA 90 bp | TCATCTCTTCCACAATGTTTTTCCTTTATTCTTTGCAGTTTCTGGTaGTTCACATTCCACAGTGGTGATTACTGTTTTCCAAGAAATCCT | + |
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Preference number: 1 (lower is better) Translates to: SSLPQCFSFILCSFW*FTFHSGDYCFPRNP Trigger: AGGATTTCTTGGAAAACAGTAATCACCACTGTGGAATGTGAACCACCAGAAACTGCAAAGAATAAAGGAAAAACATTGTGGAAGAGATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CCA 90 bp | GCTTCATCTCTTCCACAATGTTTTTCCTTTATTCTTTGCAGTTTCTaGTGGTTCACATTCCACAGTGGTGATTACTGTTTTCCAAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: ASSLPQCFSFILCSF*WFTFHSGDYCFPRN Trigger: ATTTCTTGGAAAACAGTAATCACCACTGTGGAATGTGAACCACCAGAAACTGCAAAGAATAAAGGAAAAACATTGTGGAAGAGATGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CAA 90 bp | GTTTTTCTGACACAGATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTaGCACAGCAAGCAATTGGCAGGTGATGAATCTTCACACTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: VFLTQILKSGLRSSC*HSKQLAGDESSHSL Trigger: GAGGGAGTGTGAAGATTCATCACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATCTGTGTCAGAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR CAA 90 bp | TCTCCACTTGGTGGAACTCTTAGGGAAGGATTAGGAAGTCTGTCCTaGGAGGAGGCATTAGAAGAGGTGTGTTCTTACAAGTGGGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SPLGGTLREGLGSLS*EEALEEVCSYKWAL Trigger: CAAAGCCCACTTGTAAGAACACACCTCTTCTAATGCCTCCTCCAAGGACAGACTTCCTAATCCTTCCCTAAGAGTTCCACCAAGTGGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR GCA 90 bp | GTGGTGATTACTGTTTTCCAAGAAATCCTTCAGGAGGGCAGTTGCCTTGAAGGTCCTCTGCATTTTACATaGAAACAGATTCCAGAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VVITVFQEILQEGSCLEGPLHFT*KQIPEG Trigger: CCCTTCTGGAATCTGTTTGCATGTAAAATGCAGAGG...ACCTTCAAGGCAACTGCCCTCCTGAAGGATTTCTTGGAAAACAGTAATCACCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR CCA 90 bp | GCATTAGAAGAGGTGTGTTCTTACAAGTGGGCTTTGAGGTTTCAGAAGCTACGTCTTTGCAGTTTCTGGTaGTTCACATTCCACAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: ALEEVCSYKWALRFQKLRLCSFW*FTFHSG Trigger: ACCACTGTGGAATGTGAACCACCAGAAACTGCAAAG...ACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGAACACACCTCTTCTAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR GCA 90 bp | GCATTAGAAGAGGTGTGTTCTTACAAGTGGGCTTTGAGGTTTCAGAAGCTACGTTCACCAGGACTCCTCTaGATTTTACATGCAAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ALEEVCSYKWALRFQKLRSPGLL*ILHANR Trigger: TCTGTTTGCATGTAAAATGCAGAGGAGTCCTGGTGA...ACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGAACACACCTCTTCTAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR GCA 90 bp | AATCAATGCAATATACATTCTACCACTCCACTGAATGAATATTCACGATGCCTCCTTCAGGAGGGCAGTTaGCTTGAAGGTAGGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: NQCNIHSTTPLNEYSRCLLQEGS*LEGRSP Trigger: TGGTGACCTACCTTCAAGGCAACTGCCCTCCTGAAG...GAGGCATCGTGAATATTCATTCAGTGGAGTGGTAGAATGTATATTGCATTGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGGTAAGGAAACATACATTGGAAAGGGCCTTTCCTAAGACTTCAGTAACATATGTCTCCAGCTCATaGCAGCTCAAAGCCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: SVVRKHTLERAFPKTSVTYVSSS*QLKAFY Trigger: GTAGAAGGCTTTGAGCTGGCATGAGCTGGAGACATA...TGTTACTGAAGTCTTAGGAAAGGCCCTTTCCAATGTATGTTTCCTTACCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGGTTCCACCTGTCTCTGTCTCTCTAGCACTAGAATTACAAGTGTGTCAGAAAGAAGTACGTCCATaGAGCATAAATGCTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: SRVPPVSVSLALELQVCQKEVRP*SINASK Trigger: CTTAGAAGCATTTATGCTCCATGGACGTACTTCTTT...CTGACACACTTGTAATTCTAGTGCTAGAGAGACAGAGACAGGTGGAACCCTAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR-3UTR TCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATTTAGTGGTAAGCTTCTaGTATTGCTCTGAAAAAGTC | + |
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Preference number: 2 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYLVVSF*YCSEKV Trigger: GACTTTTTCAGAGCAATATCAGAAGCTTACCACTAA...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR-3UTR TCA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACCACATTCCACAGTGGTaGTTACTGTTTTCCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LQSRLEYKQAITTNDPKHHIPQW*LLFSKK Trigger: TTTCTTGGAAAACAGTAATCACCACTGTGGAATGTG...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGGTAAGGAAACATACATTGGAAAGGGCCTTTCCTAAGACTTCAGTAACAATTCTACCACTCCACTaGATGAATATTCACGATGCC | + |
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Preference number: 2 (lower is better) Translates to: SVVRKHTLERAFPKTSVTILPLH*MNIHDA Trigger: GGCATCGTGAATATTCATTCAGTGGAGTGGTAGAAT...TGTTACTGAAGTCTTAGGAAAGGCCCTTTCCAATGTATGTTTCCTTACCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR CCA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACATTCTTTGCAGTTTCTaGTGGTTCACATTCCACAGT | + |
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Preference number: 2 (lower is better) Translates to: LQSRLEYKQAITTNDPKHILCSF*WFTFHS Trigger: ACTGTGGAATGTGAACCACCAGAAACTGCAAAGAAT...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR TCA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACAGTAATTTTAAAAAGTaGAGGCACGCAGGAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LQSRLEYKQAITTNDPKHSNFKK*RHAGRN Trigger: GTTTCTTCCTGCGTGCCTTCACTTTTTAAAATTACT...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGGTAAGGAAACATACATTGGAAAGGGCCTTTCCTAAGACTTCAGTAACAGCCAACTGTAAAATGTaGCTAGTTTCACCAGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SVVRKHTLERAFPKTSVTANCKM*LVSPAL Trigger: TAAAGCTGGTGAAACTAGTCACATTTTACAGTTGGC...TGTTACTGAAGTCTTAGGAAAGGCCCTTTCCAATGTATGTTTCCTTACCACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR CCA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACAAAGCCTTCTACCTTTaGGGGTATCTCAAAGTAATT | + |
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Preference number: 2 (lower is better) Translates to: LQSRLEYKQAITTNDPKHKAFYL*GYLKVI Trigger: AATTACTTTGAGATACCCCCAAAGGTAGAAGGCTTT...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR TCA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTCTTCTGATATTGCTCTaGAAAAGTCTTCAGCATGTG | + |
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Preference number: 2 (lower is better) Translates to: NHGYRFLGTYNLILTQLTLLILL*KSLQHV Trigger: CACATGCTGAAGACTTTTTCAGAGCAATATCAGAAG...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR-3UTR CCA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACAAATTCTGTCCAGTTTaGAGAAACTATTTCAGCACA | + |
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Preference number: 2 (lower is better) Translates to: LQSRLEYKQAITTNDPKHKFCPV*RNYFST Trigger: TGTGCTGAAATAGTTTCTCCAAACTGGACAGAATTT...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CCA 72 bp | CTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTaGCAGGTGATGAATCTTCACACTCCCTCGACTGAT | + |
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Preference number: 3 (lower is better) Translates to: LASGPLACTASN*QVMNLHTPSTD Trigger: ATCAGTCGAGGGAGTGTGAAGATTCATCACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR GCA 72 bp | CTGACACAGATCCTGAAGTCTGGCCTCAGGTCCTCTTaGTTGCACAGCAAGCAATTGGCAGGTGATGAATCT | + |
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Preference number: 3 (lower is better) Translates to: LTQILKSGLRSS*LHSKQLAGDES Trigger: AGATTCATCACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATCTGTGTCAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR-3UTR CAA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGACTCAGGTCCTCTTGCTaGCACAGCAAGCAATTGGCA | + |
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Preference number: 3 (lower is better) Translates to: CALMCVWKPKHIQKSGIRLRSSC*HSKQLA Trigger: TGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAG...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| 3UTR-3UTR CAA 90 bp | TCAGTGGTAAGGAAACATACATTGGAAAGGGCCTTTCCTAAGACTTCAGTAACAAGGAGGGCAGTTGCCTaGAAGGTAGGTCACCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SVVRKHTLERAFPKTSVTRRAVA*KVGHQD Trigger: GTCCTGGTGACCTACCTTCAAGGCAACTGCCCTCCT...TGTTACTGAAGTCTTAGGAAAGGCCCTTTCCAATGTATGTTTCCTTACCACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR GCA 72 bp | ATTACTGTTTTCCAAGAAATCCTTCAGGAGGGCAGTTaGCTTGAAGGTAGGTCACCAGGACTCCTCTGCATT | + |
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Preference number: 3 (lower is better) Translates to: ITVFQEILQEGS*LEGRSPGLLCI Trigger: AATGCAGAGGAGTCCTGGTGACCTACCTTCAAGGCAACTGCCCTCCTGAAGGATTTCTTGGAAAACAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CCA 72 bp | TTGGAGGAGGCATTAGAAGAGGTGTGTTCTTACAAGTaGGCTTTGAGGTTTCAGAAGCTACGTGATTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: LEEALEEVCSYK*ALRFQKLRDSQ Trigger: CTGGGAATCACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGAACACACCTCTTCTAATGCCTCCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CCA 72 bp | CTAGGTACAAATGCCTTTTATGTCTCCCAAGTCAGCTaGAAACCAAGTGAGAAGGAAATGACTCTGCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: LGTNAFYVSQVS*KPSEKEMTLLL Trigger: AAGCAGCAGAGTCATTTCCTTCTCACTTGGTTTCCAGCTGACTTGGGAGACATAAAAGGCATTTGTACCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR CAA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACTCTTACAAGTGGGCTTaGAGGTTTCAGAAGCTACGT | + |
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Preference number: 3 (lower is better) Translates to: LQSRLEYKQAITTNDPKHSYKWA*RFQKLR Trigger: ACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGA...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR TCA 72 bp | TGCCTTTTATGTCTCCCAAGTCAGCTGGAAACCAAGTaGGAAGGAAATGACTCTGCTGCTTATCAGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: CLLCLPSQLETK*EGNDSAAYQEK Trigger: TTTTTCCTGATAAGCAGCAGAGTCATTTCCTTCTCACTTGGTTTCCAGCTGACTTGGGAGACATAAAAGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR TCA 72 bp | CAATCAATGCAATATACATTCTACCACTCCACTGAATaGATATTCACGATGCCTCTGGGCTGGAATGTACCA | + |
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Preference number: 3 (lower is better) Translates to: QSMQYTFYHSTE*IFTMPLGWNVP Trigger: TGGTACATTCCAGCCCAGAGGCATCGTGAATATTCATTCAGTGGAGTGGTAGAATGTATATTGCATTGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR GCA 72 bp | AGAAAAGCAAATTGGATGACATGGACTAGGTACAAATaGCTTTTATGTCTCCCAAGTCAGCTGGAAACCAAG | + |
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Preference number: 3 (lower is better) Translates to: RKANWMTWTRYK*LLCLPSQLETK Trigger: CTTGGTTTCCAGCTGACTTGGGAGACATAAAAGGCATTTGTACCTAGTCCATGTCATCCAATTTGCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR TCA 72 bp | AGGACAAGGGGAATTATTAATGGACTCTCTCACCAGTaGAGTGACAAATGCATCCTAGATGTTGAAGACTAT | + |
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Preference number: 3 (lower is better) Translates to: RTRGIINGLSHQ*SDKCILDVEDY Trigger: ATAGTCTTCAACATCTAGGATGCATTTGTCACTTCACTGGTGAGAGAGTCCATTAATAATTCCCCTTGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR TCA 72 bp | CATCCTTTCACCCCTCCATTACGAACTTTAACCCTCTaGAACTGTAAGCCAAATCACATACTTTCTTTGATA | + |
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Preference number: 3 (lower is better) Translates to: HPFTPPLRTLTL*NCKPNHILSLI Trigger: TATCAAAGAAAGTATGTGATTTGGCTTACAGTTTCAGAGGGTTAAAGTTCGTAATGGAGGGGTGAAAGGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR GCA 72 bp | TCCTGGCACACAGCTACTATTTTGCACCCACTAATTTaGCCTCATAAACATTTACACACCAAATTATACAGA | + |
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Preference number: 3 (lower is better) Translates to: SWHTATILHPLI*PHKHLHTKLYR Trigger: TCTGTATAATTTGGTGTGTAAATGTTTATGAGGGCAAATTAGTGGGTGCAAAATAGTAGCTGTGTGCCAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR CCA 72 bp | TACAGAGTCAATAATTCCTCTTCTTACAAAGCAGACTaGAATACAAACAGGCAATTACGACAAACGACCCTA | + |
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Preference number: 3 (lower is better) Translates to: YRVNNSSSYKAD*NTNRQLRQTTL Trigger: TAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAAGAAGAGGAATTATTGACTCTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR-3UTR CAA 90 bp | CCAAATGTGGTTCTAGAAACCGTTTACTTCGTTGCTCTGACTTTTCTTTTACTTCAAATTCTGTCCAGTTaGGAGAAACTATTTCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: PNVVLETVYFVALTFLLLQILSS*EKLFQH Trigger: GTGCTGAAATAGTTTCTCCAAACTGGACAGAATTTG...AAGTAAAAGAAAAGTCAGAGCAACGAAGTAAACGGTTTCTAGAACCACATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| 3UTR TCA 72 bp | TTAAAGATGCTTAGTGGTAAGCTTCTGATATTGCTCTaGAAAAGTCTTCAGCATGTGACTAAATCACTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LKMLSGKLLILL*KSLQHVTKSLC Trigger: ACAGAGTGATTTAGTCACATGCTGAAGACTTTTTCAGAGCAATATCAGAAGCTTACCACTAAGCATCTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR GCA 90 bp | GATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGGCAGATCAGGGTAGGTaGAGTTGGCAGGAGTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: DPEVWPQVLLLAQQAIGRADQGR*SWQECR Trigger: CCGACACTCCTGCCAACTGCACCTACCCTGATCTGC...CCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CCA 90 bp | ATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGTCAGGGTAGGTGCAGTTaGCAGGAGTGTCGGAGCGCA | + |
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Preference number: 4 (lower is better) Translates to: ILKSGLRSSCLHSKQLAGQGRCS*QECRSA Trigger: TGCGCTCCGACACTCCTGCCAACTGCACCTACCCTG...ACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CCA 90 bp | GCCCAAGCATATACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTCTTCTAGGGCCCACCTaGAACACCCAGGTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AQAYTEVRDQRSTMAIASLLGPT*NTQVPS Trigger: GCTGGGCACCTGGGTGTTCCAGGTGGGCCCTAGAAG...AGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATGCTTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR TCA 90 bp | GATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGGCAGTCCAAGACTTCTaGACGGTATTGATGGCCTTC | + |
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Preference number: 4 (lower is better) Translates to: DPEVWPQVLLLAQQAIGRAVQDF*TVLMAF Trigger: GAAGGCCATCAATACCGTTCAGAAGTCTTGGACTGC...CCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR TCA 90 bp | GATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGCCATGGGTCCATGTTTaGCCAGCTCAAGCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: DPEVWPQVLLLAQQAIGRPWVHV*PAQASS Trigger: TGATGAAGCTTGAGCTGGTCAAACATGGACCCATGG...CCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CCA 90 bp | GTGGTGATTACTGTTTTCCAAGAAATCCTTCAGGAGGGCAGTTGCCTTGAAGGTCTTCTAGGGCCCACCTaGAACACCCAGGTGCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: VVITVFQEILQEGSCLEGLLGPT*NTQVPS Trigger: GCTGGGCACCTGGGTGTTCCAGGTGGGCCCTAGAAG...ACCTTCAAGGCAACTGCCCTCCTGAAGGATTTCTTGGAAAACAGTAATCACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| CDS-3UTR CCA 90 bp | GATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGTGTAGGAAGTCATCGTaGACTTCAAAGGCAACTGCC | + |
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Preference number: 4 (lower is better) Translates to: DPEVWPQVLLLAQQAIGRCRKSS*TSKATA Trigger: GGCAGTTGCCTTTGAAGTCCACGATGACTTCCTACA...CCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CCA 90 bp | GCATTAGAAGAGGTGTGTTCTTACAAGTGGGCTTTGAGGTTTCAGAAGCTACGTCAGGGTAGGTGCAGTTaGCAGGAGTGTCGGAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ALEEVCSYKWALRFQKLRQGRCS*QECRSA Trigger: TGCGCTCCGACACTCCTGCCAACTGCACCTACCCTG...ACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGAACACACCTCTTCTAATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGAGGCCTTGGGATCCTTTaGCTGTGGCCACTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CALMCVWKPKHIQKSGIRGLGIL*LWPLLL Trigger: AAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCC...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | CATATACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACTCATCGGGGCAGGTTTaGGCCTTGGGATCCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HIQKSGIRGQPWLSLLRNSSGQV*ALGSFG Trigger: GCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGA...GTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| 3UTR CAA 72 bp | ACACAGATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTaGCACAGCAAGCAATTGGCAGGTGATGAATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQILKSGLRSSC*HSKQLAGDESS Trigger: TGAAGATTCATCACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATCTGTGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGCATATACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTATTCATCAGTTCCTCTaGGGATACGGAAGTAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQAYTEVRDQRSTMAIASIHQFL*GYGSSH Trigger: GTGGCTACTTCCGTATCCGCAGAGGAACTGATGAAT...AGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATGCTTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| 3UTR CAA 72 bp | TGGCCTCTGCTAGCTGCTAGAGGTAGATCCAACTGTTaGTCTCTTAAGCCAAAGTCTGTTCTTGGCTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPLLAARGRSNC*SLKPKSVLGCG Trigger: ACCACAGCCAAGAACAGACTTTGGCTTAAGAGACAAACAGTTGGATCTACCTCTAGCAGCTAGCAGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| 3UTR CAA 72 bp | CTGTTTTCCAAGAAATCCTTCAGGAGGGCAGTTGCCTaGAAGGTAGGTCACCAGGACTCCTCTGCATTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LFSKKSFRRAVA*KVGHQDSSAFY Trigger: GTAAAATGCAGAGGAGTCCTGGTGACCTACCTTCAAGGCAACTGCCCTCCTGAAGGATTTCTTGGAAAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGAACCCATAGAGGCAAATaGGTAGCAGCTTCCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CALMCVWKPKHIQKSGIRTHRGK*VAASTR Trigger: TCTTGTGGAAGCTGCTACTCATTTGCCTCTATGGGT...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | TCAGTGGTAAGGAAACATACATTGGAAAGGGCCTTTCCTAAGACTTCAGTAACAGCAGATCAGGGTAGGTaGAGTTGGCAGGAGTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVVRKHTLERAFPKTSVTADQGR*SWQECR Trigger: CCGACACTCCTGCCAACTGCACCTACCCTGATCTGC...TGTTACTGAAGTCTTAGGAAAGGCCCTTTCCAATGTATGTTTCCTTACCACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGCAGTTGCCTTGAAGGTAGGTCACCAGGACTCCTCTGCATTTTACATGTACCTTTTCTTCTGTTaGTTCCATCACCGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRAVALKVGHQDSSAFYMYLFFC*FHHRAV Trigger: AACTGCTCGGTGATGGAAGCAACAGAAGAAAAGGTA...CATGTAAAATGCAGAGGAGTCCTGGTGACCTACCTTCAAGGCAACTGCCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGATTGGGCATACTTCCCTaGAATGAGGTATGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CALMCVWKPKHIQKSGIRLGILP*NEVWES Trigger: GGATTCCCATACCTCATTGCAGGGAAGTATGCCCAA...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTCGGCCCAGCACATCATaGACCCACCCAGTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: NHGYRFLGTYNLILTQLTRPSTS*THPVMV Trigger: GACCATGACTGGGTGGGTCCATGATGTGCTGGGCCG...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR TCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATCAAGATACAACCTCCTaGGGACTCAGGATTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYQDTTS*GLRIGV Trigger: GACACCAATCCTGAGTCCTCAGGAGGTTGTATCTTG...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR TCA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTTCAGCTCGAAGGGGTTaGAAGGGTCACTCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NHGYRFLGTYNLILTQLTSARRG*KGHSAQ Trigger: CTGGGCTGAGTGACCCTTTCAACCCCTTCGAGCTGA...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | ATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGTCTCATATTCCTTATATaGAGTTGCAGTCCAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: ILKSGLRSSCLHSKQLAGLIFLI*SCSPRL Trigger: AAGTCTTGGACTGCAACTGCATATAAGGAATATGAG...ACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | GCCCAAGCATATACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTAATTCTCCCTTGGTTTaGATGGAGAATCTTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQAYTEVRDQRSTMAIASNSPLV*MENLWL Trigger: CAGCCAAAGATTCTCCATGCAAACCAAGGGAGAATT...AGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATGCTTGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGACTGAGGACTCAGGATTaGTGTCTGAGAATTGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: CALMCVWKPKHIQKSGIRLRTQD*CLRIVG Trigger: ACCAACAATTCTCAGACACCAATCCTGAGTCCTCAG...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| 3UTR CAA 72 bp | GGTGGAACTCTTAGGGAAGGATTAGGAAGTCTGTCCTaGGAGGAGGCATTAGAAGAGGTGTGTTCTTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGTLREGLGSLS*EEALEEVCSYK Trigger: CTTGTAAGAACACACCTCTTCTAATGCCTCCTCCAAGGACAGACTTCCTAATCCTTCCCTAAGAGTTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS-3UTR TCA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGAACTTCTGAACGGTATTaGTGGCCTTCACAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CALMCVWKPKHIQKSGIRTSERY*WPSQSC Trigger: ACAACTTTGTGAAGGCCATCAATACCGTTCAGAAGT...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATACCACCCCAAAATCTTaGGCATACTTCCCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYTTPKS*AYFPAM Trigger: CATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGT...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATTGCATGGAGAATCTTTaGCTGTGTAGGGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYCMENL*LCRESS Trigger: GCTGCTTTCCCTACACAGCCAAAGATTCTCCATGCA...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| 3UTR CAA 72 bp | GAGGCATTAGAAGAGGTGTGTTCTTACAAGTGGGCTTaGAGGTTTCAGAAGCTACGTGATTCCCAGTTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EALEEVCSYKWA*RFQKLRDSQLA Trigger: AGCTAACTGGGAATCACGTAGCTTCTGAAACCTCAAAGCCCACTTGTAAGAACACACCTCTTCTAATGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS-3UTR TCA 90 bp | TCTAGGGTTCCACCTGTCTCTGTCTCTCTAGCACTAGAATTACAAGTGTGTCAGTTAACCTTCTCAATGTaGCTTTCCACCTTCTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRVPPVSVSLALELQVCQLTFSM*LSTFLP Trigger: TGGCAAGAAGGTGGAAAGTCACATTGAGAAGGTTAA...CTGACACACTTGTAATTCTAGTGCTAGAGAGACAGAGACAGGTGGAACCCTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | TGTGCGCTCATGTGTGTATGGAAGCCCAAGCATATACAGAAGTCAGGGATCAGATTCCTTATATGCAGTTaGAGTCCAAGACTTCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CALMCVWKPKHIQKSGIRFLICS*SPRLLN Trigger: GTTCAGAAGTCTTGGACTGCAACTGCATATAAGGAA...TCTGATCCCTGACTTCTGTATATGCTTGGGCTTCCATACACACATGAGCGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTCTTGGGCATAGGGGCTaGAAGATACAACCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NHGYRFLGTYNLILTQLTLGHRG*KIQPPE Trigger: CTCAGGAGGTTGTATCTTGCAGCCCCTATGCCCAAG...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATCTCCCTTGGTTTGCATaGAGAATCTTTGGCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYLPWFA*RIFGCV Trigger: TACACAGCCAAAGATTCTCCATGCAAACCAAGGGAG...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATTACCTTTTCTTCTGTTaGTTCCATCACCGAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYYLFFC*FHHRAV Trigger: AACTGCTCGGTGATGGAAGCAACAGAAGAAAAGGTA...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR GCA 90 bp | TCTAGGGTTCCACCTGTCTCTGTCTCTCTAGCACTAGAATTACAAGTGTGTCAGGAGACCTCCAAGATGTaGTGCATTCATATTAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRVPPVSVSLALELQVCQETSKM*CIHINL Trigger: AAGGTTAATATGAATGCAGCACATCTTGGAGGTCTC...CTGACACACTTGTAATTCTAGTGCTAGAGAGACAGAGACAGGTGGAACCCTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATTCAGAATATCTTTCCTaGAGACCTCCAAGATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYSEYLS*RPPRCA Trigger: AGCACATCTTGGAGGTCTCCAGGAAAGATATTCTGA...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATGAGGCAATTCTCCCTTaGTTTGCATGGAGAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYEAILP*FAWRIF Trigger: AAAGATTCTCCATGCAAACCAAGGGAGAATTGCCTC...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR TCA 90 bp | CATATACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACCTCAGGATTGGTGTCTaGGAATTGTTGGTTAATATA | + |
|
Preference number: 4 (lower is better) Translates to: HIQKSGIRGQPWLSLLRNLRIGV*ELLVNI Trigger: TATATTAACCAACAATTCTCAGACACCAATCCTGAG...GTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR TCA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTACAAGCAAAACAGCATaGTTTGTCAGCTCGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NHGYRFLGTYNLILTQLTTSKTA*FVSSKG Trigger: CCCCTTCGAGCTGACAAATCATGCTGTTTTGCTTGT...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CCA 90 bp | AATCAATGCAATATACATTCTACCACTCCACTGAATGAATATTCACGATGCCTCTTTGTTCCTCAGATGTaGCAAATCATACATTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NQCNIHSTTPLNEYSRCLFVPQM*QIIHSH Trigger: GTGGGAATGTATGATTTGCCACATCTGAGGAACAAA...GAGGCATCGTGAATATTCATTCAGTGGAGTGGTAGAATGTATATTGCATTGATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
||
| CDS GCA 90 bp | GCAGATCAGGGTAGGTGCAGTTGGCAGGAGTGTCGGAGCGCACGGTaGAGACTCCCAAAAGCACCAGCAGCAGGACGGCGCGCAAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ADQGRCSWQECRSAR*RLPKAPAAGRRARS Trigger: ACTCCTTGCGCGCCGTCCTGCTGCTGGTGCTTTTGGGAGTCTGCACCGTGCGCTCCGACACTCCTGCCAACTGCACCTACCCTGATCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 ENSMUST00000131108.9 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGTGCCATGGGTCCATGTTaGACCAGCTCAAGCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ILKSGLRSSCLHSKQLAGAMGPC*TSSSFI Trigger: GATGAAGCTTGAGCTGGTCAAACATGGACCCATGGC...ACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CAA 90 bp | CATATACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACGGGCCTTGGGATCCTTaGGCTGTGGCCACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HIQKSGIRGQPWLSLLRNGPWDP*AVATSP Trigger: AGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCC...GTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGTCCTGAGGACTCAGGATaGGTGTCTGAGAATTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILKSGLRSSCLHSKQLAGPEDSG*VSENCW Trigger: CCAACAATTCTCAGACACCAATCCTGAGTCCTCAGG...ACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS TCA 90 bp | GGAAGTCATCGTGGACTTCAAAGGCAACTGCCATGGGTCCATGTTTaGCCAGCTCAAGCTTCATCAGGGCTTCATTGCAGCCACCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSHRGLQRQLPWVHV*PAQASSGLHCSHHR Trigger: TCTATGGTGGCTGCAATGAAGCCCTGATGAAGCTTGAGCTGGTCAAACATGGACCCATGGCAGTTGCCTTTGAAGTCCACGATGACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS CCA 90 bp | TCATCAGTCATCGGGGCAGGTTTGGGCCTTGGGATCCTTTGGCTGTaGCCACTTCTCCTTATCAGATCTCGCAGGCTCATTTTCTCATAT | + |
|
Preference number: 5 (lower is better) Translates to: SSVIGAGLGLGILWL*PLLLIRSRRLIFSY Trigger: ATATGAGAAAATGAGCCTGCGAGATCTGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
||
| CDS TCA 90 bp | CATAGCCCACAAGCAAAACAGCATGATTTGTCAGCTCGAAGGGGTTaGAAGGGTCACTCAGCCCAGTGTGGTGATAGATTCCACTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HSPQAKQHDLSARRG*KGHSAQCGDRFHCG Trigger: ACCACAGTGGAATCTATCACCACACTGGGCTGAGTGACCCTTTCAACCCCTTCGAGCTGACAAATCATGCTGTTTTGCTTGTGGGCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS GCA 90 bp | AAAGCAGCTTTCTTCCACCACCCCAAAATCTTGGGCATACTTCCCTaGAATGAGGTATGGGAATCCACCATCACAACCTTGGGCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KAAFFHHPKILGILP*NEVWESTITTLGIG Trigger: CCCTATGCCCAAGGTTGTGATGGTGGATTCCCATACCTCATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGTGGAAGAAAGCTGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CAA 90 bp | GATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGCACAATCTCGAAGCCTaGGTTGTAAATGAGGGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: DPEVWPQVLLLAQQAIGRHNLEA*VVNEGK Trigger: TTTACCCTCATTTACAACCAAGGCTTCGAGATTGTG...CCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGTCGGCTATACTCTCAATaGCACATTCATCAGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKSGLRSSCLHSKQLAGRLYSQ*HIHQFL Trigger: GAGGAACTGATGAATGTGCAATTGAGAGTATAGCCG...ACCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS TCA 90 bp | TGGAGACCTCCAAGATGTGCTGCATTCATATTAACCTTCTCAATGTaGCTTTCCACCTTCTTGCCAACAAAGCAAGCCCAGTTCCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WRPPRCAAFILTFSM*LSTFLPTKQAQFRP Trigger: GGGCCGGAACTGGGCTTGCTTTGTTGGCAAGAAGGTGGAAAGTCACATTGAGAAGGTTAATATGAATGCAGCACATCTTGGAGGTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
||
| CDS-3UTR CAA 90 bp | GATCCTGAAGTCTGGCCTCAGGTCCTCTTGCTTGCACAGCAAGCAATTGGCAGGATTCCTTATATGCAGTaGCAGTCCAAGACTTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: DPEVWPQVLLLAQQAIGRIPYMQ*QSKTSE Trigger: TTCAGAAGTCTTGGACTGCAACTGCATATAAGGAAT...CCTGCCAATTGCTTGCTGTGCAAGCAAGAGGACCTGAGGCCAGACTTCAGGATC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
||
| CDS CCA 90 bp | GTAGTCAGAAGAATAGTAACGGAGGCAATTCTCCCTTGGTTTGCATaGAGAATCTTTGGCTGTGTAGGGAAAGCAGCTTTCTTCCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VVRRIVTEAILPWFA*RIFGCVGKAAFFHH Trigger: GTGGTGGAAGAAAGCTGCTTTCCCTACACAGCCAAAGATTCTCCATGCAAACCAAGGGAGAATTGCCTCCGTTACTATTCTTCTGACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CCA 90 bp | AATAGTAACGGAGGCAATTCTCCCTTGGTTTGCATGGAGAATCTTTaGCTGTGTAGGGAAAGCAGCTTTCTTCCACCACCCCAAAATCTT | + |
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Preference number: 5 (lower is better) Translates to: NSNGGNSPLVCMENL*LCRESSFLPPPQNL Trigger: AAGATTTTGGGGTGGTGGAAGAAAGCTGCTTTCCCTACACAGCCAAAGATTCTCCATGCAAACCAAGGGAGAATTGCCTCCGTTACTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CAA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTTCCACCATCACAACCTaGGGCATAGGGGCTGCAAGA | + |
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Preference number: 5 (lower is better) Translates to: NHGYRFLGTYNLILTQLTSTITT*GIGAAR Trigger: TCTTGCAGCCCCTATGCCCAAGGTTGTGATGGTGGA...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CCA 90 bp | AATTTAAAATTTGTTGCTGTATTTCATCAGTCATCGGGGCAGGTTTaGGCCTTGGGATCCTTTGGCTGTGGCCACTTCTCCTTATCAGAT | + |
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Preference number: 5 (lower is better) Translates to: NLKFVAVFHQSSGQV*ALGSFGCGHFSLSD Trigger: ATCTGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGATGAAATACAGCAACAAATTTTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CCA 90 bp | CACATAGTAGTAGTCAGAAGAATAGTAACGGAGGCAATTCTCCCTTaGTTTGCATGGAGAATCTTTGGCTGTGTAGGGAAAGCAGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: HIVVVRRIVTEAILP*FAWRIFGCVGKAAF Trigger: GAAAGCTGCTTTCCCTACACAGCCAAAGATTCTCCATGCAAACCAAGGGAGAATTGCCTCCGTTACTATTCTTCTGACTACTACTATGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CAA 90 bp | TTACAAAGCAGACTGGAATACAAACAGGCAATTACGACAAACGACCCTAAGCACCTACCTTTTCTTCTGTaGCTTCCATCACCGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LQSRLEYKQAITTNDPKHLPFLL*LPSPSS Trigger: ACTGCTCGGTGATGGAAGCAACAGAAGAAAAGGTAG...GTGCTTAGGGTCGTTTGTCGTAATTGCCTGTTTGTATTCCAGTCTGCTTTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| CDS GCA 90 bp | TCTCCTTATCAGATCTCGCAGGCTCATTTTCTCATATTCCTTATATaGAGTTGCAGTCCAAGACTTCTGAACGGTATTGATGGCCTTCAC | + |
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Preference number: 5 (lower is better) Translates to: SPYQISQAHFLIFLI*SCSPRLLNGIDGLH Trigger: GTGAAGGCCATCAATACCGTTCAGAAGTCTTGGACTGCAACTGCATATAAGGAATATGAGAAAATGAGCCTGCGAGATCTGATAAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CCA 90 bp | AGAGCCCCAGCTGTTCTTTATAATCCAGTATTCTATCCCAGTAACTaGATCTCTTCCATAGCCCACAAGCAAAACAGCATGATTTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RAPAVLYNPVFYPSN*ISSIAHKQNSMICQ Trigger: CTGACAAATCATGCTGTTTTGCTTGTGGGCTATGGAAGAGATCCAGTTACTGGGATAGAATACTGGATTATAAAGAACAGCTGGGGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CAA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTCACCACCCCAAAATCTaGGGCATACTTCCCTGCAAT | + |
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Preference number: 5 (lower is better) Translates to: NHGYRFLGTYNLILTQLTHHPKI*GILPCN Trigger: ATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGTG...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS TCA 90 bp | CATATTCCTTATATGCAGTTGCAGTCCAAGACTTCTGAACGGTATTaGTGGCCTTCACAAAGTTGTGGTTGTGAGTGTAGAGTCTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HIPYMQLQSKTSERY*WPSQSCGCECRVFQ Trigger: CTGAAAGACTCTACACTCACAACCACAACTTTGTGAAGGCCATCAATACCGTTCAGAAGTCTTGGACTGCAACTGCATATAAGGAATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS-3UTR CAA 90 bp | AACCATGGCTATCGCTTCTTAGGAACATATAACTTGATTTTGACACAGCTCACTCTACCTTTTCTTCTGTaGCTTCCATCACCGAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: NHGYRFLGTYNLILTQLTLPFLL*LPSPSS Trigger: ACTGCTCGGTGATGGAAGCAACAGAAGAAAAGGTAG...AGTGAGCTGTGTCAAAATCAAGTTATATGTTCCTAAGAAGCGATAGCCATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS-3UTR CAA 90 bp | TACAGAAGTCAGGGATCAGAGGTCAACCATGGCTATCGCTTCTTAGGAACATATCCTCTGACTTCATACTaGAAAAACGCAAACCATTTG | + |
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Preference number: 5 (lower is better) Translates to: YRSQGSEVNHGYRFLGTYPLTSY*KNANHL Trigger: CAAATGGTTTGCGTTTTTCAAGTATGAAGTCAGAGG...ATATGTTCCTAAGAAGCGATAGCCATGGTTGACCTCTGATCCCTGACTTCTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS TCA 90 bp | TGTGGCAAATCATACATTCCCACAGTTCCCAGCTGCATGAACAACTaGCTGATAAAATCAGTGACATCCTTGAAAAACGCAAACCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: CGKSYIPTVPSCMNN*LIKSVTSLKNANHL Trigger: CAAATGGTTTGCGTTTTTCAAGGATGTCACTGATTTTATCAGTCAGTTGTTCATGCAGCTGGGAACTGTGGGAATGTATGATTTGCCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| CDS GCA 90 bp | TATCAGATCTCGCAGGCTCATTTTCTCATATTCCTTATATGCAGTTaGAGTCCAAGACTTCTGAACGGTATTGATGGCCTTCACAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: YQISQAHFLIFLICS*SPRLLNGIDGLHKV Trigger: AACTTTGTGAAGGCCATCAATACCGTTCAGAAGTCTTGGACTGCAACTGCATATAAGGAATATGAGAAAATGAGCCTGCGAGATCTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS-3UTR CAA 90 bp | TGTCTGCAAGGTAACATCTTTTACTGTATGGCTAAGAAAGCATCTTCCTTCTCTCACAATCTCGAAGCCTaGGTTGTAAATGAGGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: CLQGNIFYCMAKKASSFSHNLEA*VVNEGK Trigger: TTTACCCTCATTTACAACCAAGGCTTCGAGATTGTG...AGAGAAGGAAGATGCTTTCTTAGCCATACAGTAAAAGATGTTACCTTGCAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| CDS GCA 72 bp | GGTAGGTGCAGTTGGCAGGAGTGTCGGAGCGCACGGTaGAGACTCCCAAAAGCACCAGCAGCAGGACGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: GRCSWQECRSAR*RLPKAPAAGRR Trigger: GCGCCGTCCTGCTGCTGGTGCTTTTGGGAGTCTGCACCGTGCGCTCCGACACTCCTGCCAACTGCACCTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 ENSMUST00000131108.9 |
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| CDS GCA 72 bp | CCTGGAACACCCAGGTGCCCAGCAGATCAGGGTAGGTaGAGTTGGCAGGAGTGTCGGAGCGCACGGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PGTPRCPADQGR*SWQECRSARCR Trigger: TCTGCACCGTGCGCTCCGACACTCCTGCCAACTGCACCTACCCTGATCTGCTGGGCACCTGGGTGTTCCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 ENSMUST00000131108.9 |
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| CDS CCA 72 bp | TCAGTCATCGGGGCAGGTTTGGGCCTTGGGATCCTTTaGCTGTGGCCACTTCTCCTTATCAGATCTCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SVIGAGLGLGIL*LWPLLLIRSRR Trigger: CCTGCGAGATCTGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CCA 72 bp | ATCGGGGCAGGTTTGGGCCTTGGGATCCTTTGGCTGTaGCCACTTCTCCTTATCAGATCTCGCAGGCTCATT | + |
|
Preference number: 6 (lower is better) Translates to: IGAGLGLGILWL*PLLLIRSRRLI Trigger: AATGAGCCTGCGAGATCTGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CAA 72 bp | ATCAGTCATCGGGGCAGGTTTGGGCCTTGGGATCCTTaGGCTGTGGCCACTTCTCCTTATCAGATCTCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ISHRGRFGPWDP*AVATSPYQISQ Trigger: CTGCGAGATCTGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS TCA 72 bp | CGTGGACTTCAAAGGCAACTGCCATGGGTCCATGTTTaGCCAGCTCAAGCTTCATCAGGGCTTCATTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGLQRQLPWVHV*PAQASSGLHCS Trigger: GCTGCAATGAAGCCCTGATGAAGCTTGAGCTGGTCAAACATGGACCCATGGCAGTTGCCTTTGAAGTCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS GCA 72 bp | ATGGGAATCCACCATCACAACCTTGGGCATAGGGGCTaGAAGATACAACCTCCTGAGGACTCAGGATTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MGIHHHNLGHRG*KIQPPEDSGLV Trigger: CACCAATCCTGAGTCCTCAGGAGGTTGTATCTTGCAGCCCCTATGCCCAAGGTTGTGATGGTGGATTCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CCA 72 bp | CTGTATTTCATCAGTCATCGGGGCAGGTTTGGGCCTTaGGATCCTTTGGCTGTGGCCACTTCTCCTTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: LYFISHRGRFGP*DPLAVATSPYQ Trigger: CTGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGATGAAATACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CAA 72 bp | GCTGTATTTCATCAGTCATCGGGGCAGGTTTGGGCCTaGGGATCCTTTGGCTGTGGCCACTTCTCCTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: AVFHQSSGQVWA*GSFGCGHFSLS Trigger: TGATAAGGAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGATGAAATACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS TCA 72 bp | CCACCACCCCAAAATCTTGGGCATACTTCCCTGCAATaGGGTATGGGAATCCACCATCACAACCTTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: PPPQNLGHTSLQ*GMGIHHHNLGH Trigger: ATGCCCAAGGTTGTGATGGTGGATTCCCATACCTCATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CCA 72 bp | CCCAAAATCTTGGGCATACTTCCCTGCAATGAGGTATaGGAATCCACCATCACAACCTTGGGCATAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: PKILGILPCNEV*ESTITTLGIGA Trigger: AGCCCCTATGCCCAAGGTTGTGATGGTGGATTCCCATACCTCATTGCAGGGAAGTATGCCCAAGATTTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CAA 72 bp | ATTTGTTGCTGTATTTCATCAGTCATCGGGGCAGGTTaGGGCCTTGGGATCCTTTGGCTGTGGCCACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: ICCCISSVIGAG*GLGILWLWPLL Trigger: GAGAAGTGGCCACAGCCAAAGGATCCCAAGGCCCAAACCTGCCCCGATGACTGATGAAATACAGCAACAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CAA 72 bp | TCGTGGACTTCAAAGGCAACTGCCATGGGTCCATGTTaGACCAGCTCAAGCTTCATCAGGGCTTCATTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SWTSKATAMGPC*TSSSFIRASLQ Trigger: CTGCAATGAAGCCCTGATGAAGCTTGAGCTGGTCAAACATGGACCCATGGCAGTTGCCTTTGAAGTCCACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS GCA 72 bp | AGGAATCGGTATGGCCGCCACGGCTATACTCTCAATTaGACATTCATCAGTTCCTCTGCGGATACGGAAGTA | + |
|
Preference number: 6 (lower is better) Translates to: RNRYGRHGYTLN*TFISSSADTEV Trigger: TACTTCCGTATCCGCAGAGGAACTGATGAATGTGCAATTGAGAGTATAGCCGTGGCGGCCATACCGATTCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CAA 72 bp | GTAGGGAAAGCAGCTTTCTTCCACCACCCCAAAATCTaGGGCATACTTCCCTGCAATGAGGTATGGGAATCC | + |
|
Preference number: 6 (lower is better) Translates to: VGKAAFFHHPKI*GILPCNEVWES Trigger: GGATTCCCATACCTCATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGTGGAAGAAAGCTGCTTTCCCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CAA 90 bp | TTTGGCTGTGTAGGGAAAGCAGCTTTCTTCCACCACCCCAAAATCTaGGGCATACTTCCCTGCAATGAGGTATGGGAATCCACCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: FGCVGKAAFFHHPKI*GILPCNEVWESTIT Trigger: TGTGATGGTGGATTCCCATACCTCATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGTGGAAGAAAGCTGCTTTCCCTACACAGCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS GCA 72 bp | TTCTTCCACCACCCCAAAATCTTGGGCATACTTCCCTaGAATGAGGTATGGGAATCCACCATCACAACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FFHHPKILGILP*NEVWESTITTL Trigger: CAAGGTTGTGATGGTGGATTCCCATACCTCATTGCAGGGAAGTATGCCCAAGATTTTGGGGTGGTGGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS GCA 72 bp | CAACTTCTTAAGGTGTACCACTACCTTTTCTTCTGTTaGTTCCATCACCGAGCAGTTAATGTCGCTTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: QLLKVYHYLFFC*FHHRAVNVASG Trigger: TCCCGAAGCGACATTAACTGCTCGGTGATGGAAGCAACAGAAGAAAAGGTAGTGGTACACCTTAAGAAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000131108.9 |
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| CDS CCA 72 bp | AGAATAGTAACGGAGGCAATTCTCCCTTGGTTTGCATaGAGAATCTTTGGCTGTGTAGGGAAAGCAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RIVTEAILPWFA*RIFGCVGKAAF Trigger: GAAAGCTGCTTTCCCTACACAGCCAAAGATTCTCCATGCAAACCAAGGGAGAATTGCCTCCGTTACTATTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CAA 90 bp | GAAAAACGCAAACCATTTGTAGTCATTCAACACAATCTCGAAGCCTaGGTTGTAAATGAGGGTAAAATGCCCGGAATTGCCCAGCTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: EKRKPFVVIQHNLEA*VVNEGKMPGIAQLV Trigger: GACGAGCTGGGCAATTCCGGGCATTTTACCCTCATTTACAACCAAGGCTTCGAGATTGTGTTGAATGACTACAAATGGTTTGCGTTTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 ENSMUST00000131108.9 |
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| CDS CAA 90 bp | CCACATAGTAGTAGTCAGAAGAATAGTAACGGAGGCAATTCTCCCTaGGTTTGCATGGAGAATCTTTGGCTGTGTAGGGAAAGCAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PHSSSQKNSNGGNSP*VCMENLWLCRESSF Trigger: AAAGCTGCTTTCCCTACACAGCCAAAGATTCTCCATGCAAACCAAGGGAGAATTGCCTCCGTTACTATTCTTCTGACTACTACTATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS TCA 72 bp | CCAAGATGTGCTGCATTCATATTAACCTTCTCAATGTaGCTTTCCACCTTCTTGCCAACAAAGCAAGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PRCAAFILTFSM*LSTFLPTKQAQ Trigger: CTGGGCTTGCTTTGTTGGCAAGAAGGTGGAAAGTCACATTGAGAAGGTTAATATGAATGCAGCACATCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CAA 72 bp | TTCTTGGTTTCGAACAGGGCTAACATAATTGACGCCTaGGACGTTTCTCCAGTCCCAAGATTCTGGCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: FLVSNRANIIDA*DVSPVPRFWQI Trigger: AATTTGCCAGAATCTTGGGACTGGAGAAACGTCCAAGGCGTCAATTATGTTAGCCCTGTTCGAAACCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS TCA 72 bp | TATATGCAGTTGCAGTCCAAGACTTCTGAACGGTATTaGTGGCCTTCACAAAGTTGTGGTTGTGAGTGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: YMQLQSKTSERY*WPSQSCGCECR Trigger: TCTACACTCACAACCACAACTTTGTGAAGGCCATCAATACCGTTCAGAAGTCTTGGACTGCAACTGCATATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CCA 72 bp | CCTCCTGAGGACTCAGGATTGGTGTCTGAGAATTGTTaGTTAATATACGAATTCTTGCTTCTAGCATACCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPEDSGLVSENC*LIYEFLLLAYP Trigger: TGGGTATGCTAGAAGCAAGAATTCGTATATTAACCAACAATTCTCAGACACCAATCCTGAGTCCTCAGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS TCA 72 bp | TCATATTCCTTATATGCAGTTGCAGTCCAAGACTTCTaGACGGTATTGATGGCCTTCACAAAGTTGTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SYSLYAVAVQDF*TVLMAFTKLWL Trigger: CAACCACAACTTTGTGAAGGCCATCAATACCGTTCAGAAGTCTTGGACTGCAACTGCATATAAGGAATATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS TCA 72 bp | TCATACATTCCCACAGTTCCCAGCTGCATGAACAACTaGCTGATAAAATCAGTGACATCCTTGAAAAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: SYIPTVPSCMNN*LIKSVTSLKNA Trigger: TGCGTTTTTCAAGGATGTCACTGATTTTATCAGTCAGTTGTTCATGCAGCTGGGAACTGTGGGAATGTATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131108.9 |
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| CDS GCA 72 bp | CAGATCTCGCAGGCTCATTTTCTCATATTCCTTATATaGAGTTGCAGTCCAAGACTTCTGAACGGTATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: QISQAHFLIFLI*SCSPRLLNGID Trigger: ATCAATACCGTTCAGAAGTCTTGGACTGCAACTGCATATAAGGAATATGAGAAAATGAGCCTGCGAGATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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| CDS CCA 72 bp | GCTGTTCTTTATAATCCAGTATTCTATCCCAGTAACTaGATCTCTTCCATAGCCCACAAGCAAAACAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: AVLYNPVFYPSN*ISSIAHKQNSM Trigger: CATGCTGTTTTGCTTGTGGGCTATGGAAGAGATCCAGTTACTGGGATAGAATACTGGATTATAAAGAACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032779.12 |
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| CDS CAA 72 bp | AAACCATTTGTAGTCATTCAACACAATCTCGAAGCCTaGGTTGTAAATGAGGGTAAAATGCCCGGAATTGCC | + |
|
Preference number: 6 (lower is better) Translates to: KPFVVIQHNLEA*VVNEGKMPGIA Trigger: GGCAATTCCGGGCATTTTACCCTCATTTACAACCAAGGCTTCGAGATTGTGTTGAATGACTACAAATGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 ENSMUST00000131108.9 |
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| CDS GCA 72 bp | TCTTTCAGAATATCTTTCCTGGAGACCTCCAAGATGTaGTGCATTCATATTAACCTTCTCAATGTGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SFRISFLETSKM*CIHINLLNVTF Trigger: GAAAGTCACATTGAGAAGGTTAATATGAATGCAGCACATCTTGGAGGTCTCCAGGAAAGATATTCTGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032779.12 ENSMUST00000128791.2 |
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