Pregenerated sensors for CTSB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021939Ensembl transcript IDs: ENSMUST00000006235.9
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGGAAGTCCTGCAGTCAAAGCCCTTGGGTCCTCGGATGCTGGGATaGGGATGGGGGTGGGAGGTATGGCAGGCAGAGCCACAACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: LEVLQSKPLGPRMLG*GWGWEVWQAEPQQQ Trigger: CTGCTGTTGTGGCTCTGCCTGCCATACCTCCCACCCCCATCCCCATCCCAGCATCCGAGGACCCAAGGGCTTTGACTGCAGGACTTCCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | ACTGTCGTGGGATGGGCTAGGAGGAGGCCAGGTAAGGACAGTGTTTaGAGGGTAGCTCTGATGGCAGGCAGCTCTGGTCCAGTCGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: TVVGWARRRPGKDSV*RVALMAGSSGPVVQ Trigger: TTGGACGACTGGACCAGAGCTGCCTGCCATCAGAGCTACCCTCCAAACACTGTCCTTACCTGGCCTCCTCCTAGCCCATCCCACGACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | CCCAGCATGTGGGAGGTGGAGGGAGGGAGGGAGGAAGGGAGGAGTTaGATTTTAAGATCCTCCTCAGTTGTGGAGGTGGGCCTGGACTAC | + |
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Preference number: 1 (lower is better) Translates to: PSMWEVEGGREEGRS*ILRSSSVVEVGLDY Trigger: GTAGTCCAGGCCCACCTCCACAACTGAGGAGGATCTTAAAATCCAACTCCTCCCTTCCTCCCTCCCTCCCTCCACCTCCCACATGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | GCTGAGGACAGGACCAAGGAGAGCTGGCCACATTACCAATGTCGATaGATGCAGATGCCTTGGGAAAAGGTAGCTTTCTCCAGAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: AEDRTKESWPHYQCR*MQMPWEKVAFSREL Trigger: CAGTTCTCTGGAGAAAGCTACCTTTTCCCAAGGCATCTGCATCCATCGACATTGGTAATGTGGCCAGCTCTCCTTGGTCCTGTCCTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 90 bp | TTAGTTGGCTACATTGTCATGGTGGCCTCTGACACCCTGTGTATCTaGAAACCAGTGTTTGAGCGGTGGAGAGGCTCTAGGCAACCACTC | + |
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Preference number: 1 (lower is better) Translates to: LVGYIVMVASDTLCI*KPVFERWRGSRQPL Trigger: GAGTGGTTGCCTAGAGCCTCTCCACCGCTCAAACACTGGTTTTCAGATACACAGGGTGTCAGAGGCCACCATGACAATGTAGCCAACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | TGCCACAGACCCAGAAGTGACCAGCTTCAAGATGCAGCTGAGAGGTaGCATTTGTCCTCTCGTGAAGTGTTCGTTCTTTTGGAAGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: CHRPRSDQLQDAAER*HLSSREVFVLLEVL Trigger: CAGGACTTCCAAAAGAACGAACACTTCACGAGAGGACAAATGCCACCTCTCAGCTGCATCTTGAAGCTGGTCACTTCTGGGTCTGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | TCATCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTaGGAGGTGGAGGGAGGGAGGGAGGAAGGGAGGAGTTGGATTTTA | + |
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Preference number: 1 (lower is better) Translates to: SSFLEATTLTSNPSM*EVEGGREEGRSWIL Trigger: TAAAATCCAACTCCTCCCTTCCTCCCTCCCTCCCTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | AAAGATGTGCTTGCTACCTTCCTCTGGTTATTTGCAAATCCTGTCTaGGACAGCCCTTTGAAGGCGTTCCCCCTGCTGTTGAGTTTCCCA | + |
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Preference number: 1 (lower is better) Translates to: KDVLATFLWLFANPV*DSPLKAFPLLLSFP Trigger: TGGGAAACTCAACAGCAGGGGGAACGCCTTCAAAGGGCTGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTAGCAAGCACATCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | CCTGGACTACATAAGACACTGTCTCTAACATCAAAACCTGGAGGCTaGAGAGATGGCTCAGCACCTGAGTGTTCTTCCAGAGGTCCTAAG | + |
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Preference number: 1 (lower is better) Translates to: PGLHKTLSLTSKPGG*RDGSAPECSSRGPK Trigger: CTTAGGACCTCTGGAAGAACACTCAGGTGCTGAGCCATCTCTCCAGCCTCCAGGTTTTGATGTTAGAGACAGTGTCTTATGTAGTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 90 bp | TGTCATAGGCCCTGTTTGAAGGCCATCGCCCAAATCTATCTGAAATaGCCTAGTCGGGCTACAAACGACTATTCAAAGGCCTGGCACTCA | + |
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Preference number: 1 (lower is better) Translates to: CHRPCLKAIAQIYLK*PSRATNDYSKAWHS Trigger: TGAGTGCCAGGCCTTTGAATAGTCGTTTGTAGCCCGACTAGGTCATTTCAGATAGATTTGGGCGATGGCCTTCAAACAGGGCCTATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 90 bp | AATCCTATTGAAAAAGCATCGGCTGAGGACAGGACCAAGGAGAGCTaGCCACATTACCAATGTCGATGGATGCAGATGCCTTGGGAAAAG | + |
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Preference number: 1 (lower is better) Translates to: NPIEKASAEDRTKES*PHYQCRWMQMPWEK Trigger: CTTTTCCCAAGGCATCTGCATCCATCGACATTGGTAATGTGGCCAGCTCTCCTTGGTCCTGTCCTCAGCCGATGCTTTTTCAATAGGATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 90 bp | CTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTaGCTTGAGCACAGGAAACCACCCACAGGAGAATCTGGTTATGGA | + |
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Preference number: 1 (lower is better) Translates to: LSPEYPFHVPKEDSS*LEHRKPPTGESGYG Trigger: TCCATAACCAGATTCTCCTGTGGGTGGTTTCCTGTGCTCAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR GCA 90 bp | CTCTTTCTCCTGTTATTGTGTTGCTGGGCACTGAACCAAGGGTCTTaGTTGGACAATATGCTGGACAAACACTCTACCATGGAGACATCC | + |
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Preference number: 1 (lower is better) Translates to: LFLLLLCCWALNQGS*LDNMLDKHSTMETS Trigger: GGATGTCTCCATGGTAGAGTGTTTGTCCAGCATATTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 90 bp | TACAAACGACTATTCAAAGGCCTGGCACTCATACTGGCTCAGGTTTaGGGACCACACAAAGAACACACAACGGCGTGTTCTAGTCTAATG | + |
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Preference number: 1 (lower is better) Translates to: YKRLFKGLALILAQV*GPHKEHTTACSSLM Trigger: CATTAGACTAGAACACGCCGTTGTGTGTTCTTTGTGTGGTCCTCAAACCTGAGCCAGTATGAGTGCCAGGCCTTTGAATAGTCGTTTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 90 bp | TGGTCCAGTCGTCCAAATCTTGCCAAAAGCTTCATGCATGTTAGATaGACTCAAAGAATCAAAGACTCCCCTGTCTACCTCATTCCCTGC | + |
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Preference number: 1 (lower is better) Translates to: WSSRPNLAKSFMHVR*TQRIKDSPVYLIPC Trigger: GCAGGGAATGAGGTAGACAGGGGAGTCTTTGATTCTTTGAGTTCATCTAACATGCATGAAGCTTTTGGCAAGATTTGGACGACTGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR GCA 90 bp | TTCTCAGAGGCCCACCCATATCCAGACATAATTATTAGAAAGATGTaGTTGCTACCTTCCTCTGGTTATTTGCAAATCCTGTCTGGGACA | + |
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Preference number: 1 (lower is better) Translates to: FSEAHPYPDIIIRKM*LLPSSGYLQILSGT Trigger: TGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTAGCAAGCACATCTTTCTAATAATTATGTCTGGATATGGGTGGGCCTCTGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 90 bp | TCCCAGCATGTGGGAGGTGGAGGGAGGGAGGGAGGAAGGGAGGAGTaGGATTTTAAGATCCTCCTCAGTTGTGGAGGTGGGCCTGGACTA | + |
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Preference number: 2 (lower is better) Translates to: SQHVGGGGREGGREE*DFKILLSCGGGPGL Trigger: TAGTCCAGGCCCACCTCCACAACTGAGGAGGATCTTAAAATCCAACTCCTCCCTTCCTCCCTCCCTCCCTCCACCTCCCACATGCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR GCA 90 bp | CCTAGCTTCAAGGTCTATTGTAGACCAGTCTGGCCTCAAACTCCCAGAGATCGGCCTTGGGTCCTCGGATaGTGGGATGGGGATGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: PSFKVYCRPVWPQTPRDRPWVLG*WDGDGG Trigger: ACCCCCATCCCCATCCCAGCATCCGAGGACCCAAGG...CCGATCTCTGGGAGTTTGAGGCCAGACTGGTCTACAATAGACCTTGAAGCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | TACCTTCCTCTGGTTATTTGCAAATCCTGTCTGGGACAGCCCTTTGAAGGCGTTTGGGTCCTCGGATGCTaGGATGGGGATGGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: YLPLVICKSCLGQPFEGVWVLGC*DGDGGG Trigger: CCCACCCCCATCCCCATCCCAGCATCCGAGGACCCA...AACGCCTTCAAAGGGCTGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR TCA 90 bp | CTGATTGCCGACATGGGAAGGCGGGCTTCCAGAGAAACCAGCCCCTCCCTCTCAGCTCCCTGTTCCCTTTaGACTGTACTTCACTATGAT | + |
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Preference number: 2 (lower is better) Translates to: LIADMGRRASRETSPSLSAPCSL*TVLHYD Trigger: ATCATAGTGAAGTACAGTTCAAAGGGAACAGGGAGC...TGAGAGGGAGGGGCTGGTTTCTCTGGAAGCCCGCCTTCCCATGTCGGCAATCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCGTGAAGTGTTCGTTCTTTTGGAAGTCCTGCAGTCAAAGCCCTTGGGTCCTTGGGGGTGGGAGGTATaGCAGGCAGAGCCACAACAG | + |
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Preference number: 2 (lower is better) Translates to: SREVFVLLEVLQSKPLGPWGWEV*QAEPQQ Trigger: CTGTTGTGGCTCTGCCTGCCATACCTCCCACCCCCA...AGGACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAACGAACACTTCACGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCCTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTCCTCGGATGCTGGGATaGGGATGGGGGTGGGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: ACLCLLSIHFMYPRKTALPRMLG*GWGWEV Trigger: TACCTCCCACCCCCATCCCCATCCCAGCATCCGAGG...AAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | GCTTGCCTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTATCACTGTCGTGGGATaGGCTAGGAGGAGGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ACLCLLSIHFMYPRKTALITVVG*ARRRPG Trigger: ACCTGGCCTCCTCCTAGCCCATCCCACGACAGTGAT...AAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGTCCTAAGTTCAATTCCCAGCAACCCCATAGTGGCTCACTACCATCTAATGGTGCGCAAGCTTTaGCCCCCACTCCAGGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: PEVLSSIPSNPIVAHYHLMVRKL*PPLQGN Trigger: ATTTCCCTGGAGTGGGGGCCAAAGCTTGCGCACCAT...TAGATGGTAGTGAGCCACTATGGGGTTGCTGGGAATTGAACTTAGGACCTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 90 bp | TCCACAGAGCTTGGTCTCTGGAGCCCTAACTCTGGAAGACTAGCATaGAGCCCTTTTGAGAACAGTGCCTCAGCTACCTGTCATTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: STELGLWSPNSGRLA*SPFENSASATCHFV Trigger: CACAAAATGACAGGTAGCTGAGGCACTGTTCTCAAAAGGGCTCAATGCTAGTCTTCCAGAGTTAGGGCTCCAGAGACCAAGCTCTGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR TCA 90 bp | CCAAGGGTCTTGCTTGGACAATATGCTGGACAAACACTCTACCATGGAGACATCCAGGTGGGCATGTGGTaGGGCAAGAAAGGAAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: PRVLLGQYAGQTLYHGDIQVGMW*GKKGSV Trigger: TACACTTCCTTTCTTGCCTCACCACATGCCCACCTG...GATGTCTCCATGGTAGAGTGTTTGTCCAGCATATTGTCCAAGCAAGACCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | TCTCGTGAAGTGTTCGTTCTTTTGGAAGTCCTGCAGTCAAAGCCCTTGGGTCCTGGTAAGGACAGTGTTTaGAGGGTAGCTCTGATGGCA | + |
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Preference number: 2 (lower is better) Translates to: SREVFVLLEVLQSKPLGPGKDSV*RVALMA Trigger: TGCCATCAGAGCTACCCTCCAAACACTGTCCTTACC...AGGACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAACGAACACTTCACGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTGCCTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTTTCTTTTGGAAGTCCTaGAGTCAAAGCCCTTGGGTC | + |
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Preference number: 2 (lower is better) Translates to: ACLCLLSIHFMYPRKTALFFWKS*SQSPWV Trigger: GACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAA...AAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | TCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTGGGAGGTGGAGAGGAGAATCTGGTTATaGAAGACATCTAGAGCCACC | + |
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Preference number: 2 (lower is better) Translates to: SFLEATTLTSNPSMWEVERRIWL*KTSRAT Trigger: GGTGGCTCTAGATGTCTTCCATAACCAGATTCTCCT...CTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 90 bp | AGGGTAGCTCTGATGGCAGGCAGCTCTGGTCCAGTCGTCCAAATCTaGCCAAAAGCTTCATGCATGTTAGATGAACTCAAAGAATCAAAG | + |
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Preference number: 2 (lower is better) Translates to: RVALMAGSSGPVVQI*PKASCMLDELKESK Trigger: CTTTGATTCTTTGAGTTCATCTAACATGCATGAAGCTTTTGGCAAGATTTGGACGACTGGACCAGAGCTGCCTGCCATCAGAGCTACCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 90 bp | TTTCTCCTGTTATTGTGTTGCTGGGCACTGAACCAAGGGTCTTGCTaGGACAATATGCTGGACAAACACTCTACCATGGAGACATCCCTA | + |
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Preference number: 2 (lower is better) Translates to: FLLLLCCWALNQGSC*DNMLDKHSTMETSL Trigger: TAGGGATGTCTCCATGGTAGAGTGTTTGTCCAGCATATTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGACATCCCTAGCCTGCTTTTGACTCTCAATATAATTTACACCATCTGTGTGGCTTCAAGATGCAGCTaGGAGGTGGCATTTGTCCTC | + |
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Preference number: 2 (lower is better) Translates to: GDIPSLLLTLNIIYTICVASRCS*EVAFVL Trigger: GAGGACAAATGCCACCTCTCAGCTGCATCTTGAAGC...CACACAGATGGTGTAAATTATATTGAGAGTCAAAAGCAGGCTAGGGATGTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGTCCTAAGTTCAATTCCCAGCAACCCCATAGTGGCTCACTACCATCTACATCCAGAGCTTCTTTaGTATAGTTCTGATTGCCGA | + |
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Preference number: 2 (lower is better) Translates to: PEVLSSIPSNPIVAHYHLHPELL*YSSDCR Trigger: TCGGCAATCAGAACTATATCAAAGAAGCTCTGGATG...TAGATGGTAGTGAGCCACTATGGGGTTGCTGGGAATTGAACTTAGGACCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR GCA 90 bp | AATATAATTTACACCATCTGTGTGCTTTCTCAGAGGCCCACCCATATCCAGACACATCTTCACTGGCTATaGGAGGTAGGGAGGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: NIIYTICVLSQRPTHIQTHLHWL*EVGREL Trigger: CAACTCCCTCCCTACCTCGCATAGCCAGTGAAGATG...TGTCTGGATATGGGTGGGCCTCTGAGAAAGCACACAGATGGTGTAAATTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | CCTAGCTTCAAGGTCTATTGTAGACCAGTCTGGCCTCAAACTCCCAGAGATCGGAAGCAGAGGGAGAATTaGTTTATTGGCACAGACATT | + |
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Preference number: 2 (lower is better) Translates to: PSFKVYCRPVWPQTPRDRKQREN*FIGTDI Trigger: AATGTCTGTGCCAATAAACCAATTCTCCCTCTGCTT...CCGATCTCTGGGAGTTTGAGGCCAGACTGGTCTACAATAGACCTTGAAGCTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 90 bp | TCAGAGGCCCACCCATATCCAGACATAATTATTAGAAAGATGTGCTaGCTACCTTCCTCTGGTTATTTGCAAATCCTGTCTGGGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SEAHPYPDIIIRKMC*LPSSGYLQILSGTA Trigger: GGCTGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTAGCAAGCACATCTTTCTAATAATTATGTCTGGATATGGGTGGGCCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTGACTTGCATTACCAATGTCGATaGATGCAGATGCCTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: LCLLSIHFMYPRKTALDLHYQCR*MQMPWE Trigger: TTCCCAAGGCATCTGCATCCATCGACATTGGTAATG...CAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | AATATAATTTACACCATCTGTGTGCTTTCTCAGAGGCCCACCCATATCCAGACATTTGCAAATCCTGTCTaGGACAGCCCTTTGAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: NIIYTICVLSQRPTHIQTFANPV*DSPLKA Trigger: CGCCTTCAAAGGGCTGTCCCAGACAGGATTTGCAAA...TGTCTGGATATGGGTGGGCCTCTGAGAAAGCACACAGATGGTGTAAATTATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR GCA 90 bp | AGTACAGCTCTTCATACTTGGTTGAGGTACACAAAGCATAAAAATCCTATTGAACCATTGACGAATGCCTaGCACAGACCCAGAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: STALHTWLRYTKHKNPIEPLTNA*HRPRSD Trigger: GTCACTTCTGGGTCTGTGGCAGGCATTCGTCAATGG...TTCAATAGGATTTTTATGCTTTGTGTACCTCAACCAAGTATGAAGAGCTGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | AATATAATTTACACCATCTGTGTGCTTTCTCAGAGGCCCACCCATATCCAGACAAAGTGTTCGTTCTTTTaGAAGTCCTGCAGTCAAAGC | + |
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Preference number: 2 (lower is better) Translates to: NIIYTICVLSQRPTHIQTKCSFF*KSCSQS Trigger: GCTTTGACTGCAGGACTTCCAAAAGAACGAACACTT...TGTCTGGATATGGGTGGGCCTCTGAGAAAGCACACAGATGGTGTAAATTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR CCA 90 bp | CTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTGACTTGGGAGAATTGGTTTATTaGCACAGACATTCCTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LCLLSIHFMYPRKTALDLGELVY*HRHSLL Trigger: TAACAAGGAATGTCTGTGCCAATAAACCAATTCTCC...CAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR-3UTR GCA 90 bp | AATATAATTTACACCATCTGTGTGCTTTCTCAGAGGCCCACCCATATCCAGACAATTATTAGAAAGATGTaGTTGCTACCTTCCTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: NIIYTICVLSQRPTHIQTIIRKM*LLPSSG Trigger: ACCAGAGGAAGGTAGCAAGCACATCTTTCTAATAAT...TGTCTGGATATGGGTGGGCCTCTGAGAAAGCACACAGATGGTGTAAATTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 72 bp | GGATGGGCTAGGAGGAGGCCAGGTAAGGACAGTGTTTaGAGGGTAGCTCTGATGGCAGGCAGCTCTGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: GWARRRPGKDSV*RVALMAGSSGP Trigger: TGGACCAGAGCTGCCTGCCATCAGAGCTACCCTCCAAACACTGTCCTTACCTGGCCTCCTCCTAGCCCATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 72 bp | CTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTaGGAGGTGGAGGGAGGGAGGGAGGAAGGGAGGAGT | + |
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Preference number: 3 (lower is better) Translates to: LEATTLTSNPSM*EVEGGREEGRS Trigger: ACTCCTCCCTTCCTCCCTCCCTCCCTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CCA 72 bp | CGAGCCACCCCACTGTTGTCCACAGAGCTTGGTCTCTaGAGCCCTAACTCTGGAAGACTAGCATTGAGCCCT | + |
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Preference number: 3 (lower is better) Translates to: RATPLLSTELGL*SPNSGRLALSP Trigger: AGGGCTCAATGCTAGTCTTCCAGAGTTAGGGCTCCAGAGACCAAGCTCTGTGGACAACAGTGGGGTGGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 72 bp | AGGGTGACAGGAAACCAGGGGGAGAGACAAAAGCCTTaGAACTGCAGCACAGAACCGTGCACCCTGCCAATG | + |
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Preference number: 3 (lower is better) Translates to: RVTGNQGERQKP*NCSTEPCTLPM Trigger: CATTGGCAGGGTGCACGGTTCTGTGCTGCAGTTTCAAGGCTTTTGTCTCTCCCCCTGGTTTCCTGTCACCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR TCA 72 bp | AAAGGTAGCTTTCTCCAGAGAACTGCACTGGGCCATTaGCGAATGCCTGCCACAGACCCAGAAGTGACCAGC | + |
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Preference number: 3 (lower is better) Translates to: KGSFLQRTALGH*RMPATDPEVTS Trigger: GCTGGTCACTTCTGGGTCTGTGGCAGGCATTCGTCAATGGCCCAGTGCAGTTCTCTGGAGAAAGCTACCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR GCA 72 bp | TCTCCAGAGAACTGCACTGGGCCATTGACGAATGCCTaGCACAGACCCAGAAGTGACCAGCTTCAAGATGCA | + |
|
Preference number: 3 (lower is better) Translates to: SPENCTGPLTNA*HRPRSDQLQDA Trigger: TGCATCTTGAAGCTGGTCACTTCTGGGTCTGTGGCAGGCATTCGTCAATGGCCCAGTGCAGTTCTCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | GCCACCCCCAAGCATACGATAACAAAACGGGTTTCCTaGGCTCCATCAGAGGATGTTCAGGGTCCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ATPKHTITKRVS*APSEDVQGPLL Trigger: GAGAAGAGGACCCTGAACATCCTCTGATGGAGCCCAGGAAACCCGTTTTGTTATCGTATGCTTGGGGGTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | AGTGCTCCGAGGTGTGAGCAGTTACAGGTACGGTTTTaGGAACCATTTCTGAGGGTGACAGGAAACCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SAPRCEQLQVRF*EPFLRVTGNQG Trigger: CCCCTGGTTTCCTGTCACCCTCAGAAATGGTTCTCAAAACCGTACCTGTAACTGCTCACACCTCGGAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | ACACTTCTAGCACTCGCCAGGCATCCAGAGCTTCTTTaGTATAGTTCTGATTGCCGACATGGGAAGGCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLLALARHPELL*YSSDCRHGKAG Trigger: GCCCGCCTTCCCATGTCGGCAATCAGAACTATATCAAAGAAGCTCTGGATGCCTGGCGAGTGCTAGAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | GCCCCATCTTTAGCCCTTGGACGGCCTTGTGAGAAATaGCACTACAGTAGAGAGAGGACATGCAGGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: APSLALGRPCEK*HYSRERTCRRE Trigger: CTCTCTCCTGCATGTCCTCTCTCTACTGTAGTGTCATTTCTCACAAGGCCGTCCAAGGGCTAAAGATGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR GCA 72 bp | TGTCCTCTCGTGAAGTGTTCGTTCTTTTGGAAGTCCTaGAGTCAAAGCCCTTGGGTCCTCGGATGCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CPLVKCSFFWKS*SQSPWVLGCWD Trigger: ATCCCAGCATCCGAGGACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAACGAACACTTCACGAGAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | CAGTGTTTGGAGGGTAGCTCTGATGGCAGGCAGCTCTaGTCCAGTCGTCCAAATCTTGCCAAAAGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: QCLEGSSDGRQL*SSRPNLAKSFM Trigger: CATGAAGCTTTTGGCAAGATTTGGACGACTGGACCAGAGCTGCCTGCCATCAGAGCTACCCTCCAAACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | GGTGGCATTTGTCCTCTCGTGAAGTGTTCGTTCTTTTaGAAGTCCTGCAGTCAAAGCCCTTGGGTCCTCGGA | + |
|
Preference number: 3 (lower is better) Translates to: GGICPLVKCSFF*KSCSQSPWVLG Trigger: TCCGAGGACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAACGAACACTTCACGAGAGGACAAATGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | GAAAAAGCATCGGCTGAGGACAGGACCAAGGAGAGCTaGCCACATTACCAATGTCGATGGATGCAGATGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EKASAEDRTKES*PHYQCRWMQMP Trigger: AGGCATCTGCATCCATCGACATTGGTAATGTGGCCAGCTCTCCTTGGTCCTGTCCTCAGCCGATGCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | CTTGCTACCTTCCTCTGGTTATTTGCAAATCCTGTCTaGGACAGCCCTTTGAAGGCGTTCCCCCTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LATFLWLFANPV*DSPLKAFPLLL Trigger: CAACAGCAGGGGGAACGCCTTCAAAGGGCTGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTAGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACTGTTGTCCACAGAGCTTGGTCTCTGGAGCCCTAACTCTGGAAGACTAGCAACTGAACCAAGGGTCTaGCTTGGACAATATGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PLLSTELGLWSPNSGRLATEPRV*LGQYAG Trigger: TCCAGCATATTGTCCAAGCAAGACCCTTGGTTCAGT...TGCTAGTCTTCCAGAGTTAGGGCTCCAGAGACCAAGCTCTGTGGACAACAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | TACATTGTCATGGTGGCCTCTGACACCCTGTGTATCTaGAAACCAGTGTTTGAGCGGTGGAGAGGCTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: YIVMVASDTLCI*KPVFERWRGSR Trigger: CCTAGAGCCTCTCCACCGCTCAAACACTGGTTTTCAGATACACAGGGTGTCAGAGGCCACCATGACAATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | AGGACCAAGGAGAGCTGGCCACATTACCAATGTCGATaGATGCAGATGCCTTGGGAAAAGGTAGCTTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RTKESWPHYQCR*MQMPWEKVAFS Trigger: GGAGAAAGCTACCTTTTCCCAAGGCATCTGCATCCATCGACATTGGTAATGTGGCCAGCTCTCCTTGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | AATGCTCCTAGCTTCAAGGTCTATTGTAGACCAGTCTaGCCTCAAACTCCCAGAGATCGGCTTGCCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NAPSFKVYCRPV*PQTPRDRLASV Trigger: GACAGAGGCAAGCCGATCTCTGGGAGTTTGAGGCCAGACTGGTCTACAATAGACCTTGAAGCTAGGAGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGCCTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTAGTACCCAAGCCAGGTaGCCTCAAACCGAGTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: ACLCLLSIHFMYPRKTALSTQAR*PQTELH Trigger: GTGTAACTCGGTTTGAGGCAACCTGGCTTGGGTACT...AAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | CTATTCAAAGGCCTGGCACTCATACTGGCTCAGGTTTaGGGACCACACAAAGAACACACAACGGCGTGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LFKGLALILAQV*GPHKEHTTACS Trigger: AGAACACGCCGTTGTGTGTTCTTTGTGTGGTCCTCAAACCTGAGCCAGTATGAGTGCCAGGCCTTTGAATAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | CCCAGAAGTGACCAGCTTCAAGATGCAGCTGAGAGGTaGCATTTGTCCTCTCGTGAAGTGTTCGTTCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PRSDQLQDAAER*HLSSREVFVLL Trigger: CAAAAGAACGAACACTTCACGAGAGGACAAATGCCACCTCTCAGCTGCATCTTGAAGCTGGTCACTTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | TGGCCACATTACCAATGTCGATGGATGCAGATGCCTTaGGAAAAGGTAGCTTTCTCCAGAGAACTGCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: WPHYQCRWMQMP*EKVAFSRELHW Trigger: CCAGTGCAGTTCTCTGGAGAAAGCTACCTTTTCCCAAGGCATCTGCATCCATCGACATTGGTAATGTGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTGCCTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTGGAGAGACAAAAGCCTaGAAACTGCAGCACAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: ACLCLLSIHFMYPRKTALGETKA*KLQHRT Trigger: GGTTCTGTGCTGCAGTTTCAAGGCTTTTGTCTCTCC...AAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTCTAACATCAAAACCTGGAGGCTGGAGAGATGGCTCAGCACCTGAGTGTTCTCTCTTTCTCCTGTTATaGTGTTGCTGGGCACTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLTSKPGGWRDGSAPECSLFLLL*CCWALN Trigger: GTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAG...AGAACACTCAGGTGCTGAGCCATCTCTCCAGCCTCCAGGTTTTGATGTTAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | CCCTTATCTCTAAGCAGGAGGAAGTGCTCCGAGGTGTaGGCAGTTACAGGTACGGTTTTGAGAACCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PLSLSRRKCSEV*AVTGTVLRTIS Trigger: AGAAATGGTTCTCAAAACCGTACCTGTAACTGCTCACACCTCGGAGCACTTCCTCCTGCTTAGAGATAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | CACACCTCTTTCTCCTGTTATTGTGTTGCTGGGCACTaGACCAAGGGTCTTGCTTGGACAATATGCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: HTSFSCYCVAGH*TKGLAWTICWT Trigger: TGTCCAGCATATTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR GCA 72 bp | AAAAGCCTTGAAACTGCAGCACAGAACCGTGCACCCTaGCAATGTCAAGCAGAGGGAGAATTGGTTTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: KSLETAAQNRAP*QCQAEGELVYW Trigger: CCAATAAACCAATTCTCCCTCTGCTTGACATTGGCAGGGTGCACGGTTCTGTGCTGCAGTTTCAAGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | CATAAGACACTGTCTCTAACATCAAAACCTGGAGGCTaGAGAGATGGCTCAGCACCTGAGTGTTCTTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: HKTLSLTSKPGG*RDGSAPECSSR Trigger: TCTGGAAGAACACTCAGGTGCTGAGCCATCTCTCCAGCCTCCAGGTTTTGATGTTAGAGACAGTGTCTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCTTCCTCTGGTTATTTGCAAATCCTGTCTGGGACAGCCCTTTGAAGGCGTTCCAGTCGTCCAAATCTaGCCAAAAGCTTCATGCATG | + |
|
Preference number: 3 (lower is better) Translates to: YLPLVICKSCLGQPFEGVPVVQI*PKASCM Trigger: CATGCATGAAGCTTTTGGCAAGATTTGGACGACTGG...AACGCCTTCAAAGGGCTGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACATCCCTAGCCTGCTTTTGACTCTCAATATAATTTACACCATCTGTGTGCTCCCAGAGATCGGCTaGCCTCTGTCTCCTGAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: GDIPSLLLTLNIIYTICVLPEIG*PLSPEY Trigger: ATACTCAGGAGACAGAGGCAAGCCGATCTCTGGGAG...CACACAGATGGTGTAAATTATATTGAGAGTCAAAAGCAGGCTAGGGATGTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGCTTCAAGGTCTATTGTAGACCAGTCTGGCCTCAAACTCCCAGAGATCGGAGCATAAAAATCCTATaGAAAAAGCATCGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSFKVYCRPVWPQTPRDRSIKIL*KKHRLR Trigger: CCTCAGCCGATGCTTTTTCAATAGGATTTTTATGCT...CCGATCTCTGGGAGTTTGAGGCCAGACTGGTCTACAATAGACCTTGAAGCTAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTGGGAGGTGGAGTGGCACAGACATTCCTaGTTAAACTACAGGGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SFLEATTLTSNPSMWEVEWHRHS*LNYRVK Trigger: CTTAACCCTGTAGTTTAACAAGGAATGTCTGTGCCA...CTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | TCCATTTCATGTACCCAAGGAAGACAGCTCTTGACTTaGGCACAGGAAACCACCCACAGGAGAATCTGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SISCTQGRQLLT*AQETTHRRIWL Trigger: TAACCAGATTCTCCTGTGGGTGGTTTCCTGTGCTCAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | GGCATGGAGACTTCATTGGTCACTTGCTCTAAGCCTTaGACAAATACCACCCCGCTGAAACCGAAGGTTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GMETSLVTCSKP*TNTTPLKPKVL Trigger: TAAAACCTTCGGTTTCAGCGGGGTGGTATTTGTTCAAGGCTTAGAGCAAGTGACCAATGAAGTCTCCATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | GCTACAAACGACTATTCAAAGGCCTGGCACTCATACTaGCTCAGGTTTGAGGACCACACAAAGAACACACAA | + |
|
Preference number: 3 (lower is better) Translates to: ATNDYSKAWHSY*LRFEDHTKNTQ Trigger: TTGTGTGTTCTTTGTGTGGTCCTCAAACCTGAGCCAGTATGAGTGCCAGGCCTTTGAATAGTCGTTTGTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | GCTACCTGTCATTTTGTGAACCTGTATATGACCCTTTaGGGTACGCTCAGACCACAGAGACATGTAGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ATCHFVNLYMTL*GTLRPQRHVEH Trigger: ATGCTCTACATGTCTCTGTGGTCTGAGCGTACCCCAAAGGGTCATATACAGGTTCACAAAATGACAGGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTGGGAGGTGGAGATTAGAAAGATGTGCTaGCTACCTTCCTCTGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: SFLEATTLTSNPSMWEVEIRKMC*LPSSGY Trigger: ATAACCAGAGGAAGGTAGCAAGCACATCTTTCTAAT...CTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR GCA 72 bp | TTAGAAAGATGTGCTTGCTACCTTCCTCTGGTTATTTaGAAATCCTGTCTGGGACAGCCCTTTGAAGGCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LERCACYLPLVI*KSCLGQPFEGV Trigger: AACGCCTTCAAAGGGCTGTCCCAGACAGGATTTGCAAATAACCAGAGGAAGGTAGCAAGCACATCTTTCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR GCA 72 bp | CTACATATGACACACCTCTTTCTCCTGTTATTGTGTTaGTGGGCACTGAACCAAGGGTCTTGCTTGGACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LHMTHLFLLLLC*WALNQGSCLDN Trigger: ATTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAGGTGTGTCATATGTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CCA 72 bp | CATATGACACACCTCTTTCTCCTGTTATTGTGTTGCTaGGCACTGAACCAAGGGTCTTGCTTGGACAATATG | + |
|
Preference number: 3 (lower is better) Translates to: HMTHLFLLLLCC*ALNQGSCLDNM Trigger: CATATTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAGGTGTGTCATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | CGTCCAAATCTTGCCAAAAGCTTCATGCATGTTAGATaGACTCAAAGAATCAAAGACTCCCCTGTCTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: RPNLAKSFMHVR*TQRIKDSPVYL Trigger: GAGGTAGACAGGGGAGTCTTTGATTCTTTGAGTTCATCTAACATGCATGAAGCTTTTGGCAAGATTTGGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR TCA 72 bp | AGGACAACGCTGATGAGTGAGGCTCCCTGTTCCCTTTaGACTGTACTTCACTATGATTTTTGTAAAATCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RTTLMSEAPCSL*TVLHYDFCKIH Trigger: ATGGATTTTACAAAAATCATAGTGAAGTACAGTTCAAAGGGAACAGGGAGCCTCACTCATCAGCGTTGTCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR GCA 72 bp | GCCCACCCATATCCAGACATAATTATTAGAAAGATGTaGTTGCTACCTTCCTCTGGTTATTTGCAAATCCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHPYPDIIIRKM*LLPSSGYLQIL Trigger: CAGGATTTGCAAATAACCAGAGGAAGGTAGCAAGCACATCTTTCTAATAATTATGTCTGGATATGGGTGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR CCA 90 bp | CTGATTGCCGACATGGGAAGGCGGGCTTCCAGAGAAACCAGCCCCTCCCTCTCAAGGATGCGGATGGCGTaGCCACCCATCATATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: LIADMGRRASRETSPSLSRMRMA*PPIISP Trigger: CGGTGATATGATGGGTGGCCACGCCATCCGCATCCT...TGAGAGGGAGGGGCTGGTTTCTCTGGAAGCCCGCCTTCCCATGTCGGCAATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR GCA 90 bp | CTGATTGCCGACATGGGAAGGCGGGCTTCCAGAGAAACCAGCCCCTCCCTCTCAATGGGCACTGGTCAGTaGCAGCAGGCAAGAAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIADMGRRASRETSPSLSMGTGQ*QQARKK Trigger: CTTCTTTCTTGCCTGCTGGCACTGACCAGTGCCCAT...TGAGAGGGAGGGGCTGGTTTCTCTGGAAGCCCGCCTTCCCATGTCGGCAATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR GCA 90 bp | GCAGGCAGAGCCACAACAGCAGGCACTACAAACCGCACTAGTCTAGGGAGAGGCTTCCACTGCCCCAAATaGCCAACAAGAGCCGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGRATTAGTTNRTSLGRGFHCPK*PTRAAG Trigger: TCCTGCGGCTCTTGTTGGGCATTTGGGGCAGTGGAA...GCCTCTCCCTAGACTAGTGCGGTTTGTAGTGCCTGCTGTTGTGGCTCTGCCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTGGGAGGTGGAGGAGCCATTGACATGGTaGTCGCAGGGAGGGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SFLEATTLTSNPSMWEVEEPLTW*SQGGMV Trigger: CACCATCCCTCCCTGCGAGCACCATGTCAATGGCTC...CTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR GCA 90 bp | CTGATTGCCGACATGGGAAGGCGGGCTTCCAGAGAAACCAGCCCCTCCCTCTCACAATTTCTGATTCAATaGCACAGTGGTTCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIADMGRRASRETSPSLSQFLIQ*HSGSLL Trigger: GAGGAGAGAACCACTGTGGCATTGAATCAGAAATTG...TGAGAGGGAGGGGCTGGTTTCTCTGGAAGCCCGCCTTCCCATGTCGGCAATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR CCA 90 bp | CCTAGCTTCAAGGTCTATTGTAGACCAGTCTGGCCTCAAACTCCCAGAGATCGGTCATCCGACAGCGGGTaGAAGGAAGGCTTGTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PSFKVYCRPVWPQTPRDRSSDSG*KEGLSW Trigger: CCATGACAAGCCTTCCTTCCACCCGCTGTCGGATGA...CCGATCTCTGGGAGTTTGAGGCCAGACTGGTCTACAATAGACCTTGAAGCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR CCA 90 bp | TCTAGAGCCACCCCCAAGCATACGATAACAAAACGGGTTTCCTGGGCTCCATCAGAGCCGCAGGAGCCCTaGTCTCTAATCTGTCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SRATPKHTITKRVSWAPSEPQEP*SLICPM Trigger: CATTGGACAGATTAGAGACCAGGGCTCCTGCGGCTC...TGATGGAGCCCAGGAAACCCGTTTTGTTATCGTATGCTTGGGGGTGGCTCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CAA 72 bp | AGGTGGCATTTGTCCTCTCGTGAAGTGTTCGTTCTTTaGGAAGTCCTGCAGTCAAAGCCCTTGGGTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: RWHLSSREVFVL*EVLQSKPLGPR Trigger: CCGAGGACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAACGAACACTTCACGAGAGGACAAATGCCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| 3UTR CAA 72 bp | GTAGACCAGTCTGGCCTCAAACTCCCAGAGATCGGCTaGCCTCTGTCTCCTGAGTATCCATTTCATGTACCC | + |
|
Preference number: 4 (lower is better) Translates to: VDQSGLKLPEIG*PLSPEYPFHVP Trigger: GGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGCCGATCTCTGGGAGTTTGAGGCCAGACTGGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR GCA 90 bp | TCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTGGGAGGTGGAGGTTCCAAGAGTTGGCTaGCAGCCAGTAGGGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFLEATTLTSNPSMWEVEVPRVG*QPVGNS Trigger: GGAGTTCCCTACTGGCTGGCAGCCAACTCTTGGAAC...CTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
||
| CDS-3UTR GCA 90 bp | CGTGCACCCTGCCAATGTCAAGCAGAGGGAGAATTGGTTTATTGGCACAGACATCCCAGTACTGGTCAGTaGGTGGGATTCCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RAPCQCQAEGELVYWHRHPSTGQ*VGFQPQ Trigger: TTGTGGCTGGAATCCCACGCACTGACCAGTACTGGG...ATGTCTGTGCCAATAAACCAATTCTCCCTCTGCTTGACATTGGCAGGGTGCACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | CTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTGACTTGCGGGAGCCATTGACATaGTGCTCGCAGGGAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: LCLLSIHFMYPRKTALDLREPLT*CSQGGM Trigger: CATCCCTCCCTGCGAGCACCATGTCAATGGCTCCCG...CAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR GCA 90 bp | TCTCTAACATCAAAACCTGGAGGCTGGAGAGATGGCTCAGCACCTGAGTGTTCTGTCCACCCAGGACAGTaGCACACAGCTTCTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: SLTSKPGGWRDGSAPECSVHPGQ*HTASSD Trigger: ATCTGAAGAAGCTGTGTGGCACTGTCCTGGGTGGAC...AGAACACTCAGGTGCTGAGCCATCTCTCCAGCCTCCAGGTTTTGATGTTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | CCAGAGGTCCTAAGTTCAATTCCCAGCAACCCCATAGTGGCTCACTACCATCTACAATGGTCGGGCAGTTaGACCATTGTTCCCGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: PEVLSSIPSNPIVAHYHLQWSGS*TIVPVH Trigger: ATGCACGGGAACAATGGTCCAACTGCCCGACCATTG...TAGATGGTAGTGAGCCACTATGGGGTTGCTGGGAATTGAACTTAGGACCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | GTGGTGAGGCAAGAAAGGAAGTGTAGGAGGGAACTATaGGGTGTAGTTGAGACCGGTGGAACTGTCTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: VVRQERKCRREL*GVVETGGTVLQ Trigger: CTGCAAGACAGTTCCACCGGTCTCAACTACACCCAATAGTTCCCTCCTACACTTCCTTTCTTGCCTCACCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR GCA 90 bp | TCTCTAACATCAAAACCTGGAGGCTGGAGAGATGGCTCAGCACCTGAGTGTTCTGGCCATTGGTGTGAATaGAGGTTCGGTCAGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSKPGGWRDGSAPECSGHWCE*RFGQKW Trigger: CCATTTCTGACCGAACCTGCATTCACACCAATGGCC...AGAACACTCAGGTGCTGAGCCATCTCTCCAGCCTCCAGGTTTTGATGTTAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | CCAAGGGTCTTGCTTGGACAATATGCTGGACAAACACTCTACCATGGAGACATCCAAGGTTCCAAGAGTTaGCTGCCAGCCAGTAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: PRVLLGQYAGQTLYHGDIQGSKS*LPASRE Trigger: TTCCCTACTGGCTGGCAGCCAACTCTTGGAACCTTG...GATGTCTCCATGGTAGAGTGTTTGTCCAGCATATTGTCCAAGCAAGACCCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | ACTATTCAAAGGCCTGGCACTCATACTGGCTCAGGTTaGAGGACCACACAAAGAACACACAACGGCGTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TIQRPGTHTGSG*RTTQRTHNGVF Trigger: GAACACGCCGTTGTGTGTTCTTTGTGTGGTCCTCAAACCTGAGCCAGTATGAGTGCCAGGCCTTTGAATAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR GCA 90 bp | TCTCGTGAAGTGTTCGTTCTTTTGGAAGTCCTGCAGTCAAAGCCCTTGGGTCCTAGAAATGGCTTCCACTaGCCCAAATGCCCAACAAGA | + |
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Preference number: 4 (lower is better) Translates to: SREVFVLLEVLQSKPLGPRNGFH*PKCPTR Trigger: TCTTGTTGGGCATTTGGGGCAGTGGAAGCCATTTCT...AGGACCCAAGGGCTTTGACTGCAGGACTTCCAAAAGAACGAACACTTCACGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR GCA 90 bp | CGTGCACCCTGCCAATGTCAAGCAGAGGGAGAATTGGTTTATTGGCACAGACATCTTCACAGCTCTTGTTaGACCTGGGAGTATCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RAPCQCQAEGELVYWHRHLHSSC*TWEYLL Trigger: AAGGAGATACTCCCAGGTGCAACAAGAGCTGTGAAG...ATGTCTGTGCCAATAAACCAATTCTCCCTCTGCTTGACATTGGCAGGGTGCACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | GGAGACATCCCTAGCCTGCTTTTGACTCTCAATATAATTTACACCATCTGTGTGGCTTGTCATGGGCACTaGTCAGTGCCAGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDIPSLLLTLNIIYTICVACHGH*SVPAGK Trigger: CTTGCCTGCTGGCACTGACCAGTGCCCATGACAAGC...CACACAGATGGTGTAAATTATATTGAGAGTCAAAAGCAGGCTAGGGATGTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | GCTTGCCTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTAGGTTCGGTCAGAAATaGCTTCCACTGCCCCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ACLCLLSIHFMYPRKTALRFGQK*LPLPQM Trigger: CATTTGGGGCAGTGGAAGCCATTTCTGACCGAACCT...AAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAGGCAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | CCAAGGGTCTTGCTTGGACAATATGCTGGACAAACACTCTACCATGGAGACATCGTACTGGTCAGTGCGTaGGATTCCAGCCACAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRVLLGQYAGQTLYHGDIVLVSA*DSSHNF Trigger: GAAATTGTGGCTGGAATCCCACGCACTGACCAGTAC...GATGTCTCCATGGTAGAGTGTTTGTCCAGCATATTGTCCAAGCAAGACCCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR TCA 90 bp | CCAGAGGTCCTAAGTTCAATTCCCAGCAACCCCATAGTGGCTCACTACCATCTATCCAGCCACAATTTCTaGTTCAATGCCACAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PEVLSSIPSNPIVAHYHLSSHNF*FNATVV Trigger: AACCACTGTGGCATTGAATCAGAAATTGTGGCTGGA...TAGATGGTAGTGAGCCACTATGGGGTTGCTGGGAATTGAACTTAGGACCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | CTGATGGCAGGCAGCTCTGGTCCAGTCGTCCAAATCTaGCCAAAAGCTTCATGCATGTTAGATGAACTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LMAGSSGPVVQI*PKASCMLDELK Trigger: TTTGAGTTCATCTAACATGCATGAAGCTTTTGGCAAGATTTGGACGACTGGACCAGAGCTGCCTGCCATCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | ATCCATTTCATGTACCCAAGGAAGACAGCTCTTGACTaGAGCACAGGAAACCACCCACAGGAGAATCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: IHFMYPRKTALD*STGNHPQENLV Trigger: AACCAGATTCTCCTGTGGGTGGTTTCCTGTGCTCAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | TTATTGTGTTGCTGGGCACTGAACCAAGGGTCTTGCTaGGACAATATGCTGGACAAACACTCTACCATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCCWALNQGSC*DNMLDKHSTME Trigger: CTCCATGGTAGAGTGTTTGTCCAGCATATTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | TCTACATATGACACACCTCTTTCTCCTGTTATTGTGTaGCTGGGCACTGAACCAAGGGTCTTGCTTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: STYDTPLSPVIV*LGTEPRVLLGQ Trigger: TTGTCCAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAGGTGTGTCATATGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | TACTGTCTACATATGACACACCTCTTTCTCCTGTTATaGTGTTGCTGGGCACTGAACCAAGGGTCTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YCLHMTHLFLLL*CCWALNQGSCL Trigger: CAAGCAAGACCCTTGGTTCAGTGCCCAGCAACACAATAACAGGAGAAAGAGGTGTGTCATATGTAGACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | TTCAGTGGTCCATTCAACTTTGTAAGCACAGATTCCTaGCTGGATTACTGGGGCATGGAGACTTCATTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSGPFNFVSTDS*LDYWGMETSLV Trigger: GACCAATGAAGTCTCCATGCCCCAGTAATCCAGCAAGGAATCTGTGCTTACAAAGTTGAATGGACCACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR TCA 90 bp | TCCTTTCTGGAAGCTACAACTCTTACCAGTAATCCCAGCATGTGGGAGGTGGAGATGCTTGTATACTCCTaGTTTGTAAGTCAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFLEATTLTSNPSMWEVEMLVYS*FVSQEV Trigger: GACTTCTTGACTTACAAATCAGGAGTATACAAGCAT...CTCCACCTCCCACATGCTGGGATTACTGGTAAGAGTTGTAGCTTCCAGAAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR GCA 90 bp | AGTACAGCTCTTCATACTTGGTTGAGGTACACAAAGCATAAAAATCCTATTGAATGTCCAGAAGCTCCATaGTCCAGAGGGATAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: STALHTWLRYTKHKNPIECPEAP*SRGIAT Trigger: GGTGGCTATCCCTCTGGAGCATGGAGCTTCTGGACA...TTCAATAGGATTTTTATGCTTTGTGTACCTCAACCAAGTATGAAGAGCTGTACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| 3UTR CAA 72 bp | CAAACACTCTACCATGGAGACATCCCTAGCCTGCTTTaGACTCTCAATATAATTTACACCATCTGTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLYHGDIPSLL*TLNIIYTICVL Trigger: AAGCACACAGATGGTGTAAATTATATTGAGAGTCAAAAGCAGGCTAGGGATGTCTCCATGGTAGAGTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CCA 90 bp | AGTACAGCTCTTCATACTTGGTTGAGGTACACAAAGCATAAAAATCCTATTGAAAATCTTCCCCAGTACTaGTCAGTGCGTGGGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: STALHTWLRYTKHKNPIENLPQY*SVRGIP Trigger: TGGAATCCCACGCACTGACCAGTACTGGGGAAGATT...TTCAATAGGATTTTTATGCTTTGTGTACCTCAACCAAGTATGAAGAGCTGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR GCA 90 bp | GGAGACATCCCTAGCCTGCTTTTGACTCTCAATATAATTTACACCATCTGTGTGATTTTTGTAGATTTCTaGCATGATCTCCTTCACACT | + |
|
Preference number: 4 (lower is better) Translates to: GDIPSLLLTLNIIYTICVIFVDF*HDLLHT Trigger: AGTGTGAAGGAGATCATGGCAGAAATCTACAAAAAT...CACACAGATGGTGTAAATTATATTGAGAGTCAAAAGCAGGCTAGGGATGTCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CAA 90 bp | CTGATTGCCGACATGGGAAGGCGGGCTTCCAGAGAAACCAGCCCCTCCCTCTCACCAATGGTCGGGCAGTaGGACCATTGTTCCCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LIADMGRRASRETSPSLSPMVGQ*DHCSRA Trigger: TGCACGGGAACAATGGTCCAACTGCCCGACCATTGG...TGAGAGGGAGGGGCTGGTTTCTCTGGAAGCCCGCCTTCCCATGTCGGCAATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 90 bp | TTCACAGCTCTTGTTGCACCTGGGAGTATCTCCTTCTCCAGTGCATaGGGGACGGGAGCCATTGACATGGTGCTCGCAGGGAGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: FTALVAPGSISFSSA*GTGAIDMVLAGRDG Trigger: ACCATCCCTCCCTGCGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGAAGGAGATACTCCCAGGTGCAACAAGAGCTGTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 90 bp | TCAGGTCATCCGACAGCGGGTGGAAGGAAGGCTTGTCATGGGCACTaGTCAGTGCCAGCAGGCAAGAAAGAAGGATCAAGGACCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGHPTAGGRKACHGH*SVPAGKKEGSRTTT Trigger: TGTGGTGGTCCTTGATCCTTCTTTCTTGCCTGCTGGCACTGACCAGTGCCCATGACAAGCCTTCCTTCCACCCGCTGTCGGATGACCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CAA 90 bp | CTCTGTCTCCTGAGTATCCATTTCATGTACCCAAGGAAGACAGCTCTTGACTTGGGGGGACGGGAGCCATaGACATGGTGCTCGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCLLSIHFMYPRKTALDLGGREP*TWCSQG Trigger: TCCCTGCGAGCACCATGTCAATGGCTCCCGTCCCCC...CAAGTCAAGAGCTGTCTTCCTTGGGTACATGAAATGGATACTCAGGAGACAGAG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS GCA 90 bp | CACCGAACGCAACCCTTCCTGGCAGTTTGGGTCCACCCAGGACAGTaGCACACAGCTTCTTCAGATAGCTTATGTCAACATTGTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HRTQPFLAVWVHPGQ*HTASSDSLCQHCRS Trigger: ACTTCTACAATGTTGACATAAGCTATCTGAAGAAGCTGTGTGGCACTGTCCTGGGTGGACCCAAACTGCCAGGAAGGGTTGCGTTCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS TCA 90 bp | GGCGTGGCCACCCATCATATCACCGGCTTCATGCTTGTATACTCCTaGTTTGTAAGTCAAGAAGTCAGAAAACACAGTGAAGGCACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVATHHITGFMLVYS*FVSQEVRKHSEGTL Trigger: GAGGGTGCCTTCACTGTGTTTTCTGACTTCTTGACTTACAAATCAGGAGTATACAAGCATGAAGCCGGTGATATGATGGGTGGCCACGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS-3UTR CAA 90 bp | AATATAATTTACACCATCTGTGTGCTTTCTCAGAGGCCCACCCATATCCAGACAGGGTGGAAGGAAGGCTaGTCATGGGCACTGGTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NIIYTICVLSQRPTHIQTGWKEG*SWALVS Trigger: ACTGACCAGTGCCCATGACAAGCCTTCCTTCCACCC...TGTCTGGATATGGGTGGGCCTCTGAGAAAGCACACAGATGGTGTAAATTATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS GCA 72 bp | TCTCCAGTGCATGGGGGACGGGAGCCATTGACATGGTaGTCGCAGGGAGGGATGGTGTATGGTAAGCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SPVHGGREPLTW*SQGGMVYGKQP Trigger: AGGCTGCTTACCATACACCATCCCTCCCTGCGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 72 bp | CCTTCTCCAGTGCATGGGGGACGGGAGCCATTGACATaGTGCTCGCAGGGAGGGATGGTGTATGGTAAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSPVHGGREPLT*CSQGGMVYGKQ Trigger: CTGCTTACCATACACCATCCCTCCCTGCGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS GCA 72 bp | GGTGTGAATGCAGGTTCGGTCAGAAATGGCTTCCACTaGCCCAAATGCCCAACAAGAGCCGCAGGAGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GVNAGSVRNGFH*PKCPTRAAGAL Trigger: CAGGGCTCCTGCGGCTCTTGTTGGGCATTTGGGGCAGTGGAAGCCATTTCTGACCGAACCTGCATTCACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 72 bp | AGGTCATCCGACAGCGGGTGGAAGGAAGGCTTGTCATaGGCACTGGTCAGTGCCAGCAGGCAAGAAAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSSDSGWKEGLS*ALVSASRQERR Trigger: CCTTCTTTCTTGCCTGCTGGCACTGACCAGTGCCCATGACAAGCCTTCCTTCCACCCGCTGTCGGATGACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 72 bp | ACTGCCCCAAATGCCCAACAAGAGCCGCAGGAGCCCTaGTCTCTAATCTGTCCAATGGTCGGGCAGTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TAPNAQQEPQEP*SLICPMVGQLD Trigger: GTCCAACTGCCCGACCATTGGACAGATTAGAGACCAGGGCTCCTGCGGCTCTTGTTGGGCATTTGGGGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 72 bp | ATGGGGAGTAGCCAGCTTCACAGCTCTTGTTGCACCTaGGAGTATCTCCTTCTCCAGTGCATGGGGGACGGG | + |
|
Preference number: 6 (lower is better) Translates to: MGSSQLHSSCCT*EYLLLQCMGDG Trigger: CCCGTCCCCCATGCACTGGAGAAGGAGATACTCCCAGGTGCAACAAGAGCTGTGAAGCTGGCTACTCCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CAA 72 bp | GTATCTCCTTCTCCAGTGCATGGGGGACGGGAGCCATaGACATGGTGCTCGCAGGGAGGGATGGTGTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSPSPVHGGREP*TWCSQGGMVYG Trigger: ACCATACACCATCCCTCCCTGCGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGAAGGAGATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS TCA 72 bp | TATCTCCTTCTCCAGTGCATGGGGGACGGGAGCCATTaGCATGGTGCTCGCAGGGAGGGATGGTGTATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: YLLLQCMGDGSH*HGARREGWCMV Trigger: TACCATACACCATCCCTCCCTGCGAGCACCATGTCAATGGCTCCCGTCCCCCATGCACTGGAGAAGGAGATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 72 bp | CTCGGCCATTGGTGTGAATGCAGGTTCGGTCAGAAATaGCTTCCACTGCCCCAAATGCCCAACAAGAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LGHWCECRFGQK*LPLPQMPNKSR Trigger: GCGGCTCTTGTTGGGCATTTGGGGCAGTGGAAGCCATTTCTGACCGAACCTGCATTCACACCAATGGCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS TCA 72 bp | TCAGCAGACACCTCCACGTTGACTCGGCCATTGGTGTaGATGCAGGTTCGGTCAGAAATGGCTTCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SADTSTLTRPLV*MQVRSEMASTA Trigger: GGCAGTGGAAGCCATTTCTGACCGAACCTGCATTCACACCAATGGCCGAGTCAACGTGGAGGTGTCTGCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS GCA 72 bp | TGTAGGATGGGGAGTAGCCAGCTTCACAGCTCTTGTTaGACCTGGGAGTATCTCCTTCTCCAGTGCATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CRMGSSQLHSSC*TWEYLLLQCMG Trigger: CCCCATGCACTGGAGAAGGAGATACTCCCAGGTGCAACAAGAGCTGTGAAGCTGGCTACTCCCCATCCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CAA 72 bp | TTAATCAGGTCATCCGACAGCGGGTGGAAGGAAGGCTaGTCATGGGCACTGGTCAGTGCCAGCAGGCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: LIRSSDSGWKEG*SWALVSASRQE Trigger: TTCTTGCCTGCTGGCACTGACCAGTGCCCATGACAAGCCTTCCTTCCACCCGCTGTCGGATGACCTGATTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS GCA 72 bp | CAACCCTTCCTGGCAGTTTGGGTCCACCCAGGACAGTaGCACACAGCTTCTTCAGATAGCTTATGTCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QPFLAVWVHPGQ*HTASSDSLCQH Trigger: ATGTTGACATAAGCTATCTGAAGAAGCTGTGTGGCACTGTCCTGGGTGGACCCAAACTGCCAGGAAGGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS CCA 72 bp | GGAAGTGTACCCAAAGTGCTTATCCTCTTTGTAGGATaGGGAGTAGCCAGCTTCACAGCTCTTGTTGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: GSVPKVLILFVG*GVASFTALVAP Trigger: AGGTGCAACAAGAGCTGTGAAGCTGGCTACTCCCCATCCTACAAAGAGGATAAGCACTTTGGGTACACTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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| CDS TCA 72 bp | ACCCATCATATCACCGGCTTCATGCTTGTATACTCCTaGTTTGTAAGTCAAGAAGTCAGAAAACACAGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: THHITGFMLVYS*FVSQEVRKHSE Trigger: TTCACTGTGTTTTCTGACTTCTTGACTTACAAATCAGGAGTATACAAGCATGAAGCCGGTGATATGATGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006235.9 |
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