Pregenerated sensors for CTSA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017760Ensembl transcript IDs: ENSMUST00000103092.9, ENSMUST00000103093.10, ENSMUST00000127650.8, ENSMUST00000143780.9, ENSMUST00000151493.3
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGTCTGTGACGCCCTGAGGCCCAGGCTGGGATGCACCAGGCTGTaGGAAGTCTGGGCAGTTTTAGTACAGGACTTGCCCCACGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: AVCDALRPRLGCTRL*EVWAVLVQDLPHGS Trigger: GCTCCCGTGGGGCAAGTCCTGTACTAAAACTGCCCAGACTTCTCACAGCCTGGTGCATCCCAGCCTGGGCCTCAGGGCGTCACAGACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 90 bp | GCCGGAACAAAGTGCTCACTTGGTCCTAGGCTGTCTGTGACGCCCTaGGGCCCAGGCTGGGATGCACCAGGCTGTGAGAAGTCTGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: AGTKCSLGPRLSVTP*GPGWDAPGCEKSGQ Trigger: CTGCCCAGACTTCTCACAGCCTGGTGCATCCCAGCCTGGGCCTCAGGGCGTCACAGACAGCCTAGGACCAAGTGAGCACTTTGTTCCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 90 bp | CCACGATGGCCGGAACAAAGTGCTCACTTGGTCCTAGGCTGTCTGTaGCGCCCTGAGGCCCAGGCTGGGATGCACCAGGCTGTGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: PRWPEQSAHLVLGCL*RPEAQAGMHQAVRS Trigger: ACTTCTCACAGCCTGGTGCATCCCAGCCTGGGCCTCAGGGCGTCACAGACAGCCTAGGACCAAGTGAGCACTTTGTTCCGGCCATCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR CCA 90 bp | TGGACACCCAGGCTGAGCTTGCCTCTCTCATCCACAGAGCGTACCTaGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTG | + |
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Preference number: 1 (lower is better) Translates to: WTPRLSLPLSSTERT*RGVQIPLPEGINFV Trigger: CACGAAGTTGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGTACGCTCTGTGGATGAGAGAGGCAAGCTCAGCCTGGGTGTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR TCA 90 bp | TCACTGTTGGGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAGTaGTTGACAAGAACCGTCCTGCAGACGTTGCGGCCTCCCATGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLLGLTSTLPKGFEK*LTRTVLQTLRPPMS Trigger: GGACATGGGAGGCCGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAAGTGGAGGTCAGCCCCAACAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 90 bp | GGTTTCAAATCTACTCAAATCAGTCTGCGCTGGAGTCTCTGGCGGTaGGTTGGGGATGGCAAAGGGTGGGTCCAGGCCTCGGGGCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GFKSTQISLRWSLWR*VGDGKGWVQASGQV Trigger: AACTTGCCCCGAGGCCTGGACCCACCCTTTGCCATCCCCAACTCACCGCCAGAGACTCCAGCGCAGACTGATTTGAGTAGATTTGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR CCA 90 bp | AACTTCGTGCGTGAGGTGGTGACCAACCACGCGGTAAGTACATTGTaGAAAGGAGGCCGTAGACCAGGGCATTCCTGTCCCTACAACACC | + |
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Preference number: 1 (lower is better) Translates to: NFVREVVTNHAVSTL*KGGRRPGHSCPYNT Trigger: GGTGTTGTAGGGACAGGAATGCCCTGGTCTACGGCCTCCTTTCCACAATGTACTTACCGCGTGGTTGGTCACCACCTCACGCACGAAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR TCA 90 bp | TTGCTCAAGAGTCTTGTGTTTGTTTGGAGGCTGTTTCCAAACAACTaGACCAGCCAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACT | + |
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Preference number: 1 (lower is better) Translates to: LLKSLVFVWRLFPNN*TSQAPCPLPQGFVT Trigger: AGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTGGCTGGTTCAGTTGTTTGGAAACAGCCTCCAAACAAACACAAGACTCTTGAGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 90 bp | GGCACTCAGGGATGCACACCTGGGAAATGGCAGCTACCTGAAGGATaGTTGGATAGAACTGGGAAGGCTGTCACTTGCTGCCATCTTTTA | + |
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Preference number: 1 (lower is better) Translates to: GTQGCTPGKWQLPEG*LDRTGKAVTCCHLL Trigger: TAAAAGATGGCAGCAAGTGACAGCCTTCCCAGTTCTATCCAATCATCCTTCAGGTAGCTGCCATTTCCCAGGTGTGCATCCCTGAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACAGGACTCCTCTCTGCTaGGAGAGGCCGAGAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: QAPCPLPQGFVTVGADLHRTPLC*ERPRGA Trigger: AGCCCCTCTCGGCCTCTCTCAGCAGAGAGGAGTCCT...GTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCAGGACTCCTCTCTGCTaGGAGAGGCCGAGAGGGGCT | + |
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Preference number: 2 (lower is better) Translates to: LCTPCQPLPIYSVSGPGARTPLC*ERPRGA Trigger: AGCCCCTCTCGGCCTCTCTCAGCAGAGAGGAGTCCT...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCATTCAGGAACCTAACTaGAGTCTTCTCTGCACCCCC | + |
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Preference number: 2 (lower is better) Translates to: ARLPVPSRRASSLLGLTSIQEPN*SLLCTP Trigger: GGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAAT...GGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCGGGCTGATCAGGTACTaGGGATTTCCATGGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LCTPCQPLPIYSVSGPGAGLIRY*GFPWVA Trigger: TGCAACCCATGGAAATCCTCAGTACCTGATCAGCCC...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR-3UTR TCA 90 bp | ATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACTGTCTGTGACGCCCTaGGGCCCAGGCTGGGATGCA | + |
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Preference number: 2 (lower is better) Translates to: ITPPGWLAFRNLTEVFSALSVTP*GPGWDA Trigger: TGCATCCCAGCCTGGGCCTCAGGGCGTCACAGACAG...TGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTCCAGAGACCAAAGGCACTCAGGGATGCACACCTGGGAAATGGCAGCTACTTCTCTGCACCCCCTaGCAACCCCTTCCCATCTAC | + |
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Preference number: 2 (lower is better) Translates to: GAPETKGTQGCTPGKWQLLLCTP*QPLPIY Trigger: GTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAGAAG...TAGCTGCCATTTCCCAGGTGTGCATCCCTGAGTGCCTTTGGTCTCTGGAGCCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR TCA 90 bp | TGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAATTCAGGAACCTAACTaGAGTCTTCTCTGCACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: CPLPQGFVTVGADLHFAKIQEPN*SLLCTP Trigger: GGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAAT...TTTGGCAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR CAA 90 bp | ATCAACTTCGTGCGTGAGGTGGTGACCAACCACGCGGTAAGTACATaGTGGAAAGGAGGCCGTAGACCAGGGCATTCCTGTCCCTACAAC | + |
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Preference number: 2 (lower is better) Translates to: INFVREVVTNHAVST*WKGGRRPGHSCPYN Trigger: GTTGTAGGGACAGGAATGCCCTGGTCTACGGCCTCCTTTCCACAATGTACTTACCGCGTGGTTGGTCACCACCTCACGCACGAAGTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGGGGCTGATCAGGTACTaGGGATTTCCATGGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: FAKGLREVIDKNRPADVAGLIRY*GFPWVA Trigger: TGCAACCCATGGAAATCCTCAGTACCTGATCAGCCC...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR-3UTR TCA 90 bp | GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTGGATGCACCAGGCTGTaGGAAGTCTGGGCAGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: ATEKSPVGSYTRFNSRISGCTRL*EVWAVL Trigger: TAAAACTGCCCAGACTTCTCACAGCCTGGTGCATCC...ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR CAA 90 bp | CCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTaGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAACCATCAA | + |
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Preference number: 2 (lower is better) Translates to: PSTVLVVPVPQRRAQ*EAIPDLIPELVNHQ Trigger: TTGATGGTTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | CCGGAACAAAGTGCTCACTTGGTCCTAGGCTGTCTGTaGCGCCCTGAGGCCCAGGCTGGGATGCACCAGGCT | + |
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Preference number: 3 (lower is better) Translates to: PEQSAHLVLGCL*RPEAQAGMHQA Trigger: AGCCTGGTGCATCCCAGCCTGGGCCTCAGGGCGTCACAGACAGCCTAGGACCAAGTGAGCACTTTGTTCCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | GACGCCCTGAGGCCCAGGCTGGGATGCACCAGGCTGTaGGAAGTCTGGGCAGTTTTAGTACAGGACTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: DALRPRLGCTRL*EVWAVLVQDLP Trigger: GGGCAAGTCCTGTACTAAAACTGCCCAGACTTCTCACAGCCTGGTGCATCCCAGCCTGGGCCTCAGGGCGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | AAGTGCTCACTTGGTCCTAGGCTGTCTGTGACGCCCTaGGGCCCAGGCTGGGATGCACCAGGCTGTGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: KCSLGPRLSVTP*GPGWDAPGCEK Trigger: CTTCTCACAGCCTGGTGCATCCCAGCCTGGGCCTCAGGGCGTCACAGACAGCCTAGGACCAAGTGAGCACTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | GGGCAGTGGTGGCGCACGCCTTTAATTCCAGCACTCTaGGGCAGGCGGATTTCAGAGCTCCAGGCCAACCTG | + |
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Preference number: 3 (lower is better) Translates to: GQWWRTPLIPAL*GRRISELQANL Trigger: CAGGTTGGCCTGGAGCTCTGAAATCCGCCTGCCTCAGAGTGCTGGAATTAAAGGCGTGCGCCACCACTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR CCA 72 bp | AGGCTGAGCTTGCCTCTCTCATCCACAGAGCGTACCTaGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATC | + |
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Preference number: 3 (lower is better) Translates to: RLSLPLSSTERT*RGVQIPLPEGI Trigger: GATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGTACGCTCTGTGGATGAGAGAGGCAAGCTCAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR CAA 90 bp | TGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAGTTTCTCTAGCTCTGTaGGGGTCCTGGGGTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: CPLPQGFVTVGADLHFAKVSLAL*GSWGGQ Trigger: CTGACCACCCCAGGACCCCAACAGAGCTAGAGAAAC...TTTGGCAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | CGGCGGTGGATGGTGGACATGACGACACAGATGGACTaGTGGACACCCAGGCTGAGCTTGCCTCTCTCATCC | + |
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Preference number: 3 (lower is better) Translates to: RRWMVDMTTQMD*WTPRLSLPLSS Trigger: GGATGAGAGAGGCAAGCTCAGCCTGGGTGTCCATCAGTCCATCTGTGTCGTCATGTCCACCATCCACCGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR TCA 72 bp | TCTACTCAAATCAGTCTGCGCTGGAGTCTCTGGCGGTaGGTTGGGGATGGCAAAGGGTGGGTCCAGGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: STQISLRWSLWR*VGDGKGWVQAS Trigger: CGAGGCCTGGACCCACCCTTTGCCATCCCCAACTCACCGCCAGAGACTCCAGCGCAGACTGATTTGAGTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR GCA 72 bp | TGCCTCTCTCATCCACAGAGCGTACCTGGCGTGGGGTaGAGATCCCCCTTCCTGAGGGTATCAACTTCGTGC | + |
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Preference number: 3 (lower is better) Translates to: CLSHPQSVPGVG*RSPFLRVSTSC Trigger: GCACGAAGTTGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGTACGCTCTGTGGATGAGAGAGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTCCAGAGACCAAAGGCACTCAGGGATGCACACCTGGGAAATGGCAGCTAACACCCAGGCTGAGCTaGCCTCTCTCATCCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: GAPETKGTQGCTPGKWQLTPRLS*PLSSTE Trigger: CTCTGTGGATGAGAGAGGCAAGCTCAGCCTGGGTGT...TAGCTGCCATTTCCCAGGTGTGCATCCCTGAGTGCCTTTGGTCTCTGGAGCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR CCA 72 bp | CGTGAGGTGGTGACCAACCACGCGGTAAGTACATTGTaGAAAGGAGGCCGTAGACCAGGGCATTCCTGTCCC | + |
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Preference number: 3 (lower is better) Translates to: REVVTNHAVSTL*KGGRRPGHSCP Trigger: GGGACAGGAATGCCCTGGTCTACGGCCTCCTTTCCACAATGTACTTACCGCGTGGTTGGTCACCACCTCACG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR CAA 90 bp | CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAGTTTCTCTAGCTCTGTaGGGGTCCTGGGGTGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LPIYSVSGPGATEKSPVGVSLAL*GSWGGQ Trigger: CTGACCACCCCAGGACCCCAACAGAGCTAGAGAAAC...TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | GGGCTGACCTCCACTTTGCCAAAGGGCTTCGAGAAGTaGTTGACAAGAACCGTCCTGCAGACGTTGCGGCCT | + |
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Preference number: 3 (lower is better) Translates to: GLTSTLPKGFEK*LTRTVLQTLRP Trigger: AGGCCGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAAGTGGAGGTCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR TCA 72 bp | GGATGCACACCTGGGAAATGGCAGCTACCTGAAGGATaGTTGGATAGAACTGGGAAGGCTGTCACTTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GCTPGKWQLPEG*LDRTGKAVTCC Trigger: GCAGCAAGTGACAGCCTTCCCAGTTCTATCCAATCATCCTTCAGGTAGCTGCCATTTCCCAGGTGTGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTCCAGAGACCAAAGGCACTCAGGGATGCACACCTGGGAAATGGCAGCTAGAGTCTTGTGTTTGTTaGGAGGCTGTTTCCAAACAA | + |
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Preference number: 3 (lower is better) Translates to: GAPETKGTQGCTPGKWQLESCVC*EAVSKQ Trigger: TTGTTTGGAAACAGCCTCCAAACAAACACAAGACTC...TAGCTGCCATTTCCCAGGTGTGCATCCCTGAGTGCCTTTGGTCTCTGGAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS-3UTR GCA 90 bp | GCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTTGCCGGAAAGAGGGCTaGTTGGCCAGGCCGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: APCPLPQGFVTVGADLHFCRKEG*LARPGR Trigger: TCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCCGGCA...AAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR TCA 90 bp | GCCAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACCACTCATCGCCCATaGAGTTGCAGGCCATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ARLPVPSRRASSLLGLTSTTHRP*SCRPCP Trigger: TGGACATGGCCTGCAACTTCATGGGCGATGAGTGGT...GGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR GCA 90 bp | GCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTAGCCAGGGCCGGCGCTaGACCTCCATCTTCTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: APCPLPQGFVTVGADLHFSQGRR*TSIFWL Trigger: CAACCAGAAGATGGAGGTGCAGCGCCGGCCCTGGCT...AAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR GCA 90 bp | AGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCCGAGAGGGGCTGATCAGGTGCCGGAAAGAGGGCTaGTTGGCCAGGCCGGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SISGGLLSAERGREGLIRCRKEG*LARPGR Trigger: TCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCCGGCA...CCTGATCAGCCCCTCTCGGCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR GCA 90 bp | CTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGGCTTCCTTGCGTCCTTaGTCTCCAGGAGGCGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: LPVPSRRASSLLGLTSTLASLRP*SPGGAF Trigger: AAAGGCGCCTCCTGGAGAGCAAGGACGCAAGGAAGC...CAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS-3UTR CCA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCGGAAAGAGGGCTGCTTaGCCAGGCCGGGGAGACAAT | + |
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Preference number: 4 (lower is better) Translates to: LCTPCQPLPIYSVSGPGAGKRAA*PGRGDN Trigger: ATTGTCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCC...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CCA 90 bp | GCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGTGACACCATCTGGCTaGATCAGAAAGGGGCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: APCPLPQGFVTVGADLHFVTPSG*IRKGPC Trigger: GCACGGCCCCTTTCTGATCCAGCCAGATGGTGTCAC...AAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CCA 90 bp | GCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTCAGGGTGACACCATCTaGCTGGATCAGAAAGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: APCPLPQGFVTVGADLHFQGDTI*LDQKGA Trigger: GGCCCCTTTCTGATCCAGCCAGATGGTGTCACCCTG...AAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CCA 90 bp | CAGGACTTGCCCCACGGGAGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCCACGGGGCTGTTCTTTaGGTCGTTCTGCGACTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QDLPHGSISGGLLSAERGHGAVL*VVLRLH Trigger: GTGGAGTCGCAGAACGACCCAAAGAACAGCCCCGTG...GCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCTCCCGTGGGGCAAGTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| 3UTR CAA 72 bp | GGGATGGCAAAGGGTGGGTCCAGGCCTCGGGGCAAGTaGGCCGCTCACTCAAACCTGTATGCACTGTCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GMAKGGSRPRGK*AAHSNLYALSV Trigger: GACAGACAGTGCATACAGGTTTGAGTGAGCGGCCAACTTGCCCCGAGGCCTGGACCCACCCTTTGCCATCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS-3UTR TCA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCGGTTGTACTCCAGGGTaGCACCATCTGGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LCTPCQPLPIYSVSGPGAGCTPG*HHLAGS Trigger: TGATCCAGCCAGATGGTGTCACCCTGGAGTACAACC...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | CAGGACTTGCCCCACGGGAGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCGGTTGTACTCCAGGGTaGCACCATCTGGCTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: QDLPHGSISGGLLSAERGGCTPG*HHLAGS Trigger: TGATCCAGCCAGATGGTGTCACCCTGGAGTACAACC...GCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCTCCCGTGGGGCAAGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGAAGTTACACTTGTTCTaGGCGCAGCAGTGGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPVPSRRASSLLGLTSTLKLHLF*AQQWVC Trigger: GCAGACCCACTGCTGCGCTCAGAACAAGTGTAACTT...CAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | CTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGGAACATAGGGGTTGTTaGGGTAGTTGGAAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVPSRRASSLLGLTSTLEHRGC*GSWKGL Trigger: CAGCCCCTTCCAACTACCTCAACAACCCCTATGTTC...CAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCGTGCTTGGAGTCCGATaGTCTGAGGTAGCCGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LCTPCQPLPIYSVSGPGAVLGVR*SEVAGV Trigger: TACTCCGGCTACCTCAGAGCATCGGACTCCAAGCAC...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | CTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGAGGTGGGGATGTAGATaGCAGCATAGCTCTCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVPSRRASSLLGLTSTLRWGCR*QHSSLL Trigger: CAGGAGAGAGCTATGCTGGCATCTACATCCCCACCT...CAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | CAGGACTTGCCCCACGGGAGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCGCGCAGCAGTGGGTCTaGAGTGAAGTCCAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QDLPHGSISGGLLSAERGAQQWV*SEVQSL Trigger: CAGACTTTGGACTTCACTGCAGACCCACTGCTGCGC...GCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCTCCCGTGGGGCAAGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | AGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCCGAGAGGGGCTGATCAGGGGGCTGTGGTGTTGGTaGAGGGAGGATCCAAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SISGGLLSAERGREGLIRGLWCW*REDPSV Trigger: TACGCTTGGATCCTCCCTGCACCAACACCACAGCCC...CCTGATCAGCCCCTCTCGGCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | CAGGACTTGCCCCACGGGAGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCGGTACTGGGAGTTCATaGTTTGGTAGAGGCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QDLPHGSISGGLLSAERGGTGSS*FGRGGG Trigger: ACCGCCGCCTCTACCAAAGCATGAACTCCCAGTACC...GCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCTCCCGTGGGGCAAGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACAGCCAGGGCCGGCGCTaGACCTCCATCTTCTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANSQGRR*TSIFWL Trigger: CAACCAGAAGATGGAGGTGCAGCGCCGGCCCTGGCT...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | ACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGCAGGGTGACACCATCTaGCTGGATCAGAAAGGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TWRGVQIPLPEGINFVREQGDTI*LDQKGA Trigger: GGCCCCTTTCTGATCCAGCCAGATGGTGTCACCCTG...CTCACGCACGAAGTTGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGGTGCTTGGAGTCCGATaGTCTGAGGTAGCCGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: TWRGVQIPLPEGINFVREVLGVR*SEVAGV Trigger: TACTCCGGCTACCTCAGAGCATCGGACTCCAAGCAC...CTCACGCACGAAGTTGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACGGAAAGAGGGCTGCTTaGCCAGGCCGGGGAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANGKRAA*PGRGDN Trigger: ATTGTCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCC...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | TGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAAAAGTTACACTTGTTCTaGGCGCAGCAGTGGGTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CPLPQGFVTVGADLHFAKKLHLF*AQQWVC Trigger: GCAGACCCACTGCTGCGCTCAGAACAAGTGTAACTT...TTTGGCAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | CAGGACTTGCCCCACGGGAGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCCCTCCATCTTCTGGTTaGGCGAATCCACAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: QDLPHGSISGGLLSAERGPPSSG*ANPQTT Trigger: AGTGGTTTGTGGATTCGCTCAACCAGAAGATGGAGG...GCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCTCCCGTGGGGCAAGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACAGGAGGCAAGTCCATTaGCCACAGCCAGCCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANRRQVH*PQPAPE Trigger: TTCAGGGGCTGGCTGTGGGCAATGGACTTGCCTCCT...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACGGGCTGTGGTGTTGGTaGAGGGAGGATCCAAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANGLWCW*REDPSV Trigger: TACGCTTGGATCCTCCCTGCACCAACACCACAGCCC...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCAATTCACCAAGAAGTTaGACATGTCCCAGCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LCTPCQPLPIYSVSGPGANSPRS*TCPSGA Trigger: TGCCCCGCTGGGACATGTGCAACTTCTTGGTGAATT...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | AGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCCGAGAGGGGCTGATCAGGGGTATTTCTGTGAACTaGGCAGCTTCAGGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SISGGLLSAERGREGLIRGISVN*AASGTG Trigger: CCCAGTACCTGAAGCTGCTCAGTTCACAGAAATACC...CCTGATCAGCCCCTCTCGGCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | GCCTTTAATTCCAGCACTCTGAGGCAGGCGGATTTCAGAGCTCCAGGCCAACCTAGGAGGCAAGTCCATTaGCCACAGCCAGCCCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFNSSTLRQADFRAPGQPRRQVH*PQPAPE Trigger: TTCAGGGGCTGGCTGTGGGCAATGGACTTGCCTCCT...AGGTTGGCCTGGAGCTCTGAAATCCGCCTGCCTCAGAGTGCTGGAATTAAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR GCA 90 bp | ACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGAATTCACCAAGAAGTTaGACATGTCCCAGCGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWRGVQIPLPEGINFVRENSPRS*TCPSGA Trigger: TGCCCCGCTGGGACATGTGCAACTTCTTGGTGAATT...CTCACGCACGAAGTTGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| 3UTR CAA 72 bp | GTGCGTGAGGTGGTGACCAACCACGCGGTAAGTACATaGTGGAAAGGAGGCCGTAGACCAGGGCATTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VREVVTNHAVST*WKGGRRPGHSC Trigger: ACAGGAATGCCCTGGTCTACGGCCTCCTTTCCACAATGTACTTACCGCGTGGTTGGTCACCACCTCACGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR TCA 90 bp | GGCTCCAGAGACCAAAGGCACTCAGGGATGCACACCTGGGAAATGGCAGCTACCCCTCCATCTTCTGGTTaGGCGAATCCACAAACCACT | + |
|
Preference number: 4 (lower is better) Translates to: GSRDQRHSGMHTWEMAATPPSSG*ANPQTT Trigger: AGTGGTTTGTGGATTCGCTCAACCAGAAGATGGAGG...GGTAGCTGCCATTTCCCAGGTGTGCATCCCTGAGTGCCTTTGGTCTCTGGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR CCA 90 bp | ATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCAGAAGCCCACCCCAGCTaGGGACTCGATATACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITPPGWLAFRNLTEVFSAEAHPS*GLDIQH Trigger: GTGCTGTATATCGAGTCCCCAGCTGGGGTGGGCTTC...TGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCGGTGAGTTGGGGATGGCAAAGGGTGGGTCCAGGCCTCGGGGCAAGTATGTTGCCAAAATCCTaGACTACAAGTGTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAVSWGWQRVGPGLGASMLPKS*TTSVSS Trigger: TGAGGACACACTTGTAGTCCAGGATTTTGGCAACAT...ACTTGCCCCGAGGCCTGGACCCACCCTTTGCCATCCCCAACTCACCGCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR CCA 90 bp | CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGTTGGAAGGGGCTGTaGTGTTGGTGCAGGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPIYSVSGPGATEKSPVGSWKGL*CWCRED Trigger: ATCCTCCCTGCACCAACACCACAGCCCCTTCCAACT...TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | TGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACTTTGCCAAATGCACCTCCATCTTCTaGTTGAGCGAATCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPLPQGFVTVGADLHFAKCTSIF*LSESTN Trigger: GTTTGTGGATTCGCTCAACCAGAAGATGGAGGTGCA...TTTGGCAAAGTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | GACACAGATGGACTGATGGACACCCAGGCTGAGCTTGCCTCTCTCATCCACAGAGAACATAGGGGTTGTTaGGGTAGTTGGAAGGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DTDGLMDTQAELASLIHREHRGC*GSWKGL Trigger: CAGCCCCTTCCAACTACCTCAACAACCCCTATGTTC...TCTGTGGATGAGAGAGGCAAGCTCAGCCTGGGTGTCCATCAGTCCATCTGTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACGGTATTTCTGTGAACTaGGCAGCTTCAGGTACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANGISVN*AASGTG Trigger: CCCAGTACCTGAAGCTGCTCAGTTCACAGAAATACC...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTGGTACTGGGAGTTCATaGTTTGGTAGAGGCGGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGPGATEKSPVGSYTRFGTGSS*FGRGGG Trigger: ACCGCCGCCTCTACCAAAGCATGAACTCCCAGTACC...AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGACCAGTACAGCCAAGGTaGGGATGTAGATGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LPIYSVSGPGATEKSPVGPVQPR*GCRCQH Trigger: ATGCTGGCATCTACATCCCCACCTTGGCTGTACTGG...TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | ATCACCCCACCTGGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCAAGTTGGAAGGGGCTGTaGTGTTGGTGCAGGGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITPPGWLAFRNLTEVFSASWKGL*CWCRED Trigger: ATCCTCCCTGCACCAACACCACAGCCCCTTCCAACT...TGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCCAGGTGGGGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR TCA 90 bp | GGGGCTCCAGAGACCAAAGGCACTCAGGGATGCACACCTGGGAAATGGCAGCTAAGAGATTGTAGATGTTaGGGCCAGATTTGCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GAPETKGTQGCTPGKWQLRDCRC*GQICPQ Trigger: TTGTGGGCAAATCTGGCCTCAACATCTACAATCTCT...TAGCTGCCATTTCCCAGGTGTGCATCCCTGAGTGCCTTTGGTCTCTGGAGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGACCACTCATCGCCCATaGAGTTGCAGGCCATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FAKGLREVIDKNRPADVATTHRP*SCRPCP Trigger: TGGACATGGCCTGCAACTTCATGGGCGATGAGTGGT...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGGCATCTCTGCTTCCTTaGGTCCTTGCTCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FAKGLREVIDKNRPADVAASLLP*VLALQE Trigger: CTCCTGGAGAGCAAGGACGCAAGGAAGCAGAGATGC...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACAAATCTCCGCTTAAGTaGCAGGCGAGTGAAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANKSPLK*QASEDV Trigger: AACATCTTCACTCGCCTGCCACTTAAGCGGAGATTT...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACATGTTGCCAAAATCCTaGACTACAAGTGTGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWLAFRNLTEVFSAPPANMLPKS*TTSVSS Trigger: TGAGGACACACTTGTAGTCCAGGATTTTGGCAACAT...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTTGCACCTCCATCTTCTaGTTGAGCGAATCCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSGPGATEKSPVGSYTRFCTSIF*LSESTN Trigger: GTTTGTGGATTCGCTCAACCAGAAGATGGAGGTGCA...AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR GCA 90 bp | GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTGCGCAGCAGTGGGTCTaGAGTGAAGTCCAAAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATEKSPVGSYTRFNSRISAQQWV*SEVQSL Trigger: CAGACTTTGGACTTCACTGCAGACCCACTGCTGCGC...ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGAAATCTCCGCTTAAGTaGCAGGCGAGTGAAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FAKGLREVIDKNRPADVAKSPLK*QASEDV Trigger: AACATCTTCACTCGCCTGCCACTTAAGCGGAGATTT...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| 3UTR CAA 72 bp | GTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTaGGAAGCTATACCCGATTTAATTCCAGAATTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLVVPVPQRRAQ*EAIPDLIPELV Trigger: GACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAACCATCACGGGGCTGTTCTTTaGGTCGTTCTGCGACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAQLEAIPDLIPELVNHHGAVL*VVLRLH Trigger: GTGGAGTCGCAGAACGACCCAAAGAACAGCCCCGTG...ATGGTTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CCA 90 bp | GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCCAGTACAGCCAAGGTaGGGATGTAGATGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATEKSPVGSYTRFNSRISPVQPR*GCRCQH Trigger: ATGCTGGCATCTACATCCCCACCTTGGCTGTACTGG...ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACCGGAAAGAGGGCTGCTaGGCCAGGCCGGGGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: QAPCPLPQGFVTVGADLHRKEGC*ARPGRQ Trigger: TTGTCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCCG...GTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | GCCAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCCTGGGAGTTCATGCTTaGGTAGAGGCGGCGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: ARLPVPSRRASSLLGLTSLGVHA*VEAAVL Trigger: CAGTACCGCCGCCTCTACCAAAGCATGAACTCCCAG...GGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACCTGGGAGTTCATGCTTaGGTAGAGGCGGCGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: QAPCPLPQGFVTVGADLHLGVHA*VEAAVL Trigger: CAGTACCGCCGCCTCTACCAAAGCATGAACTCCCAG...GTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 90 bp | AAAGAGGGCTGCTTGGCCAGGCCGGGGAGACAATCGATTTCATCCTaGTCCGGAGCTGCTTCGTTCCGGGACGCCCAGGACAGGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KEGCLARPGRQSISS*SGAASFRDAQDRSS Trigger: GCTGCTCCTGTCCTGGGCGTCCCGGAACGAAGCAGCTCCGGACCAGGATGAAATCGATTGTCTCCCCGGCCTGGCCAAGCAGCCCTCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS GCA 90 bp | CTTGGCCAGGCCGGGGAGACAATCGATTTCATCCTGGTCCGGAGCTaGTTCGTTCCGGGACGCCCAGGACAGGAGCAGCAACAAGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LGQAGETIDFILVRS*FVPGRPGQEQQQEQ Trigger: CTGCTCTTGTTGCTGCTCCTGTCCTGGGCGTCCCGGAACGAAGCAGCTCCGGACCAGGATGAAATCGATTGTCTCCCCGGCCTGGCCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS-3UTR CAA 90 bp | GCCAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACCTCCATCTTCTGGTaGAGCGAATCCACAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARLPVPSRRASSLLGLTSTSIFW*SESTNH Trigger: GTGGTTTGTGGATTCGCTCAACCAGAAGATGGAGGT...GGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCGAGGTAGCCGGAGTATaGCCGGAAAGAGGGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCTPCQPLPIYSVSGPGAEVAGV*PERGLL Trigger: AAGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTC...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | ACCTGGCGTGGGGTGCAGATCCCCCTTCCTGAGGGTATCAACTTCGTGCGTGAGGGCATCTCTGCTTCCTaGCGTCCTTGCTCTCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TWRGVQIPLPEGINFVREGISAS*RPCSPG Trigger: TCCTGGAGAGCAAGGACGCAAGGAAGCAGAGATGCC...CTCACGCACGAAGTTGATACCCTCAGGAAGGGGGATCTGCACCCCACGCCAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS TCA 90 bp | GCGACTCCACAAACCAGTAGTGGAAGTGCTTGGAGTCCGATGCTCTaGGGTAGCCGGAGTATTGCCGGAAAGAGGGCTGCTTGGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATPQTSSGSAWSPML*GSRSIAGKRAAWPG Trigger: GCCTGGCCAAGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTCAGAGCATCGGACTCCAAGCACTTCCACTACTGGTTTGTGGAGTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS CCA 90 bp | GCAGCCGGGACCCCCGTTAAGCCAAAGCACCACGGGGCTGTTCTTTaGGTCGTTCTGCGACTCCACAAACCAGTAGTGGAAGTGCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AAGTPVKPKHHGAVL*VVLRLHKPVVEVLG Trigger: TCCAAGCACTTCCACTACTGGTTTGTGGAGTCGCAGAACGACCCAAAGAACAGCCCCGTGGTGCTTTGGCTTAACGGGGGTCCCGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCGGTGAGTTGGGGATGGCAAAGGGTGGGTCCAGGCCTCGGGGCAAGTGCCACCTCTGTGTCATaGGTCACGTACATCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLAVSWGWQRVGPGLGASATSVS*VTYILS Trigger: TGACAAGATGTACGTGACCAATGACACAGAGGTGGC...ACTTGCCCCGAGGCCTGGACCCACCCTTTGCCATCCCCAACTCACCGCCAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS-3UTR CAA 90 bp | CAGGACTTGCCCCACGGGAGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCTCATCGCCCATGAAGTaGCAGGCCATGTCCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: QDLPHGSISGGLLSAERGSSPMK*QAMSTS Trigger: AGATGTGGACATGGCCTGCAACTTCATGGGCGATGA...GCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCTCCCGTGGGGCAAGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGCGGAAAGAGGGCTGCTaGGCCAGGCCGGGGAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FAKGLREVIDKNRPADVARKEGC*ARPGRQ Trigger: TTGTCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCCG...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CAGGCTCCCTGTCCCCTCCCGCAGGGCTTCGTCACTGTTGGGGCTGACCTCCACGTCAGGAAAAGTTTGTaGTCCTTGTATTCCGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: QAPCPLPQGFVTVGADLHVRKSL*SLYSGK Trigger: CTTTCCGGAATACAAGGACAACAAACTTTTCCTGAC...GTGGAGGTCAGCCCCAACAGTGACGAAGCCCTGCGGGAGGGGACAGGGAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACCTCCATCTTCTGGTaGAGCGAATCCACAAACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LCTPCQPLPIYSVSGPGATSIFW*SESTNH Trigger: GTGGTTTGTGGATTCGCTCAACCAGAAGATGGAGGT...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS GCA 90 bp | GTTCTGCGACTCCACAAACCAGTAGTGGAAGTGCTTGGAGTCCGATaGTCTGAGGTAGCCGGAGTATTGCCGGAAAGAGGGCTGCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLRLHKPVVEVLGVR*SEVAGVLPERGLLG Trigger: GCCAAGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTCAGAGCATCGGACTCCAAGCACTTCCACTACTGGTTTGTGGAGTCGCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS GCA 90 bp | TCATGCTTTGGTAGAGGCGGCGGTACTGTAAATTCACCAAGAAGTTaGACATGTCCCAGCGGGGCAGCGACTCGGGGATGTGGAGAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SCFGRGGGTVNSPRS*TCPSGAATRGCGEP Trigger: AGGCTCTCCACATCCCCGAGTCGCTGCCCCGCTGGGACATGTGCAACTTCTTGGTGAATTTACAGTACCGCCGCCTCTACCAAAGCATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS GCA 90 bp | GGTGCAGGGAGGATCCAAGCGTACCTTGTCCCCAGAACGCATCAGTaGCTCAGGAAATCTCCGCTTAAGTGGCAGGCGAGTGAAGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: GAGRIQAYLVPRTHQ*LRKSPLKWQASEDV Trigger: AACATCTTCACTCGCCTGCCACTTAAGCGGAGATTTCCTGAGGCACTGATGCGTTCTGGGGACAAGGTACGCTTGGATCCTCCCTGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 90 bp | AATCAGGTTCCAAGCATAGGGGTTGTACTCCAGGGTGACACCATCTaGCTGGATCAGAAAGGGGCCGTGCTCTGTAAGCAGCCCATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NQVPSIGVVLQGDTI*LDQKGAVLCKQPIE Trigger: CTCGATGGGCTGCTTACAGAGCACGGCCCCTTTCTGATCCAGCCAGATGGTGTCACCCTGGAGTACAACCCCTATGCTTGGAACCTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS-3UTR CAA 90 bp | AGCATTAGCGGAGGACTCCTCTCTGCTGAGAGAGGCCGAGAGGGGCTGATCAGGATGTTGAGGCCAGATTaGCCCACAATTCGAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: SISGGLLSAERGREGLIRMLRPD*PTIRDT Trigger: AGTGTCTCGAATTGTGGGCAAATCTGGCCTCAACAT...CCTGATCAGCCCCTCTCGGCCTCTCTCAGCAGAGAGGAGTCCTCCGCTAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CTCTGCACCCCCTGCCAACCCCTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCGTCAGGAAAAGTTTGTaGTCCTTGTATTCCGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LCTPCQPLPIYSVSGPGAVRKSL*SLYSGK Trigger: CTTTCCGGAATACAAGGACAACAAACTTTTCCTGAC...GGCACCGGGACCACTAACACTGTAGATGGGAAGGGGTTGGCAGGGGGTGCAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CTTCCCATCTACAGTGTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGATCATCGCCCATGAAGTaGCAGGCCATGTCCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: LPIYSVSGPGATEKSPVGSSPMK*QAMSTS Trigger: AGATGTGGACATGGCCTGCAACTTCATGGGCGATGA...TCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAACACTGTAGATGGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CCAAGGAAAGGGTGTTCCCAGGTTTCACGGTGTATTTCTCTCCCACAGGTTTCATGCTTCCTTGCGTCCTaGCTCTCCAGGAGGCGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PRKGCSQVSRCISLPQVSCFLAS*LSRRRL Trigger: AAGGCGCCTCCTGGAGAGCAAGGACGCAAGGAAGCA...TGAAACCTGTGGGAGAGAAATACACCGTGAAACCTGGGAACACCCTTTCCTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS TCA 90 bp | TGCCGGGCACCCCACCAGCACACGGAGCATAGAGATTGTAGATGTTaGGGCCAGATTTGCCCACAATTCGAGACACTTCCAGGAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRAPHQHTEHRDCRC*GQICPQFETLPGDC Trigger: ACAATCTCCTGGAAGTGTCTCGAATTGTGGGCAAATCTGGCCTCAACATCTACAATCTCTATGCTCCGTGTGCTGGTGGGGTGCCCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 90 bp | GGTCACGTACATCTTGTCATCCGAGTAGGAGAAGCCCACCCCAGCTaGGGACTCGATATACAGCACGTTGGCAATCAGGTTCCAAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GHVHLVIRVGEAHPS*GLDIQHVGNQVPSI Trigger: TATGCTTGGAACCTGATTGCCAACGTGCTGTATATCGAGTCCCCAGCTGGGGTGGGCTTCTCCTACTCGGATGACAAGATGTACGTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS-3UTR CAA 90 bp | GGGTGGCTGGCATTCAGGAACCTAACTGAAGTCTTCTCTGCACCCCCTGCCAACATGTTGAGGCCAGATTaGCCCACAATTCGAGACACT | + |
|
Preference number: 5 (lower is better) Translates to: GWLAFRNLTEVFSAPPANMLRPD*PTIRDT Trigger: AGTGTCTCGAATTGTGGGCAAATCTGGCCTCAACAT...GTTGGCAGGGGGTGCAGAGAAGACTTCAGTTAGGTTCCTGAATGCCAGCCACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 90 bp | AATCTCCGCTTAAGTGGCAGGCGAGTGAAGATGTTGCCAAAATCCTaGACTACAAGTGTGTCCTCATATCTATGTCTGCCGGGCACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: NLRLSGRRVKMLPKS*TTSVSSYLCLPGTP Trigger: TGGGGTGCCCGGCAGACATAGATATGAGGACACACTTGTAGTCCAGGATTTTGGCAACATCTTCACTCGCCTGCCACTTAAGCGGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 90 bp | CTTGTCCCCAGAACGCATCAGTGCCTCAGGAAATCTCCGCTTAAGTaGCAGGCGAGTGAAGATGTTGCCAAAATCCTGGACTACAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LVPRTHQCLRKSPLK*QASEDVAKILDYKC Trigger: ACACTTGTAGTCCAGGATTTTGGCAACATCTTCACTCGCCTGCCACTTAAGCGGAGATTTCCTGAGGCACTGATGCGTTCTGGGGACAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | GACACAGATGGACTGATGGACACCCAGGCTGAGCTTGCCTCTCTCATCCACAGACCTGTCAGGAAAAGTTaGTTGTCCTTGTATTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: DTDGLMDTQAELASLIHRPVRKS*LSLYSG Trigger: TCCGGAATACAAGGACAACAAACTTTTCCTGACAGG...TCTGTGGATGAGAGAGGCAAGCTCAGCCTGGGTGTCCATCAGTCCATCTGTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS-3UTR CAA 90 bp | GTTAGTGGTCCCGGTGCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAAAAGTTTGTTGTCCTaGTATTCCGGAAAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSGPGATEKSPVGSYTRFKSLLS*YSGKRR Trigger: CCGCCTCTTTCCGGAATACAAGGACAACAAACTTTT...AAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGCACCGGGACCACTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGAGGCGAGTGAAGATGTaGCCAAAATCCTGGACTACA | + |
|
Preference number: 5 (lower is better) Translates to: FAKGLREVIDKNRPADVARRVKM*PKSWTT Trigger: TGTAGTCCAGGATTTTGGCAACATCTTCACTCGCCT...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | TTTGCCAAAGGGCTTCGAGAAGTGATTGACAAGAACCGTCCTGCAGACGTTGCGCCTGTCAGGAAAAGTTaGTTGTCCTTGTATTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: FAKGLREVIDKNRPADVAPVRKS*LSLYSG Trigger: TCCGGAATACAAGGACAACAAACTTTTCCTGACAGG...CGCAACGTCTGCAGGACGGTTCTTGTCAATCACTTCTCGAAGCCCTTTGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | CCAAGGAAAGGGTGTTCCCAGGTTTCACGGTGTATTTCTCTCCCACAGGTTTCAAGGCGAGTGAAGATGTaGCCAAAATCCTGGACTACA | + |
|
Preference number: 5 (lower is better) Translates to: PRKGCSQVSRCISLPQVSRRVKM*PKSWTT Trigger: TGTAGTCCAGGATTTTGGCAACATCTTCACTCGCCT...TGAAACCTGTGGGAGAGAAATACACCGTGAAACCTGGGAACACCCTTTCCTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103092.9 |
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| CDS-3UTR CAA 90 bp | AGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTCAACCATGAGGTAGCCGGAGTATaGCCGGAAAGAGGGCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRAQLEAIPDLIPELVNHEVAGV*PERGLL Trigger: AAGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTC...ATGGTTGACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS-3UTR CAA 90 bp | GCCACAGAGAAGAGCCCAGTTGGAAGCTATACCCGATTTAATTCCAGAATTAGTAAAAGTTTGTTGTCCTaGTATTCCGGAAAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ATEKSPVGSYTRFNSRISKSLLS*YSGKRR Trigger: CCGCCTCTTTCCGGAATACAAGGACAACAAACTTTT...ACTAATTCTGGAATTAAATCGGGTATAGCTTCCAACTGGGCTCTTCTCTGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 72 bp | TGCTTGGCCAGGCCGGGGAGACAATCGATTTCATCCTaGTCCGGAGCTGCTTCGTTCCGGGACGCCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CLARPGRQSISS*SGAASFRDAQD Trigger: GTCCTGGGCGTCCCGGAACGAAGCAGCTCCGGACCAGGATGAAATCGATTGTCTCCCCGGCCTGGCCAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS CAA 72 bp | GTGCTTGGAGTCCGATGCTCTGAGGTAGCCGGAGTATaGCCGGAAAGAGGGCTGCTTGGCCAGGCCGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VLGVRCSEVAGV*PERGLLGQAGE Trigger: CTCCCCGGCCTGGCCAAGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTCAGAGCATCGGACTCCAAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS GCA 72 bp | GCCGGGGAGACAATCGATTTCATCCTGGTCCGGAGCTaGTTCGTTCCGGGACGCCCAGGACAGGAGCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: AGETIDFILVRS*FVPGRPGQEQQ Trigger: TTGCTGCTCCTGTCCTGGGCGTCCCGGAACGAAGCAGCTCCGGACCAGGATGAAATCGATTGTCTCCCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS GCA 72 bp | AGGGTGACACCATCTGGCTGGATCAGAAAGGGGCCGTaGTCTGTAAGCAGCCCATCGAGCGAGCTGCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RVTPSGWIRKGP*SVSSPSSELQP Trigger: CGGCTGCAGCTCGCTCGATGGGCTGCTTACAGAGCACGGCCCCTTTCTGATCCAGCCAGATGGTGTCACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS GCA 72 bp | CAAGAGCAGTGGAGACAGCGCGGTTCCGGGCATCTCTaGTTCCTTGCGTCCTTGCTCTCCAGGAGGCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QEQWRQRGSGHL*FLASLLSRRRL Trigger: AAGGCGCCTCCTGGAGAGCAAGGACGCAAGGAAGCAGAGATGCCCGGAACCGCGCTGTCTCCACTGCTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000151493.3 |
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| CDS CAA 72 bp | CAGCGCGGTTCCGGGCATCTCTGCTTCCTTGCGTCCTaGCTCTCCAGGAGGCGCCTTTGGACTGGAAGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QRGSGHLCFLAS*LSRRRLWTGSH Trigger: ATGACTTCCAGTCCAAAGGCGCCTCCTGGAGAGCAAGGACGCAAGGAAGCAGAGATGCCCGGAACCGCGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000151493.3 |
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| CDS CAA 90 bp | GTAGTGGAAGTGCTTGGAGTCCGATGCTCTGAGGTAGCCGGAGTATaGCCGGAAAGAGGGCTGCTTGGCCAGGCCGGGGAGACAATCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VVEVLGVRCSEVAGV*PERGLLGQAGETID Trigger: ATCGATTGTCTCCCCGGCCTGGCCAAGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTCAGAGCATCGGACTCCAAGCACTTCCACTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS CAA 72 bp | CGAGGCTTGTCCGTGGGGACCATGTGTCCGGCACCCTaGATGGTGAGGAAGGTGATGTGTGAACACTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RGLSVGTMCPAP*MVRKVMCEHSF Trigger: GAAGGAGTGTTCACACATCACCTTCCTCACCATCAAGGGTGCCGGACACATGGTCCCCACGGACAAGCCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 72 bp | CCAAGCATAGGGGTTGTACTCCAGGGTGACACCATCTaGCTGGATCAGAAAGGGGCCGTGCTCTGTAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSIGVVLQGDTI*LDQKGAVLCKQ Trigger: CTGCTTACAGAGCACGGCCCCTTTCTGATCCAGCCAGATGGTGTCACCCTGGAGTACAACCCCTATGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS CAA 72 bp | GCTGTGGTGTTGGTGCAGGGAGGATCCAAGCGTACCTaGTCCCCAGAACGCATCAGTGCCTCAGGAAATCTC | + |
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Preference number: 6 (lower is better) Translates to: AVVLVQGGSKRT*SPERISASGNL Trigger: GAGATTTCCTGAGGCACTGATGCGTTCTGGGGACAAGGTACGCTTGGATCCTCCCTGCACCAACACCACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CAA 72 bp | AGGAACCTCGAGAACATGGTAAAAGCAGCTCGAGGCTaGTCCGTGGGGACCATGTGTCCGGCACCCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: RNLENMVKAARG*SVGTMCPAPLM Trigger: CATCAAGGGTGCCGGACACATGGTCCCCACGGACAAGCCTCGAGCTGCTTTTACCATGTTCTCGAGGTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CAA 90 bp | TTGGAAGGGGCTGTGGTGTTGGTGCAGGGAGGATCCAAGCGTACCTaGTCCCCAGAACGCATCAGTGCCTCAGGAAATCTCCGCTTAAGT | + |
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Preference number: 6 (lower is better) Translates to: LEGAVVLVQGGSKRT*SPERISASGNLRLS Trigger: ACTTAAGCGGAGATTTCCTGAGGCACTGATGCGTTCTGGGGACAAGGTACGCTTGGATCCTCCCTGCACCAACACCACAGCCCCTTCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CAA 90 bp | AAAGCAGCTCGAGGCTTGTCCGTGGGGACCATGTGTCCGGCACCCTaGATGGTGAGGAAGGTGATGTGTGAACACTCCTTCACGAAACCA | + |
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Preference number: 6 (lower is better) Translates to: KAARGLSVGTMCPAP*MVRKVMCEHSFTKP Trigger: TGGTTTCGTGAAGGAGTGTTCACACATCACCTTCCTCACCATCAAGGGTGCCGGACACATGGTCCCCACGGACAAGCCTCGAGCTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS TCA 72 bp | CAAACCAGTAGTGGAAGTGCTTGGAGTCCGATGCTCTaGGGTAGCCGGAGTATTGCCGGAAAGAGGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QTSSGSAWSPML*GSRSIAGKRAA Trigger: AGCAGCCCTCTTTCCGGCAATACTCCGGCTACCTCAGAGCATCGGACTCCAAGCACTTCCACTACTGGTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS TCA 72 bp | CAATCAGGTTCCAAGCATAGGGGTTGTACTCCAGGGTaGCACCATCTGGCTGGATCAGAAAGGGGCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: QSGSKHRGCTPG*HHLAGSERGRA Trigger: AGCACGGCCCCTTTCTGATCCAGCCAGATGGTGTCACCCTGGAGTACAACCCCTATGCTTGGAACCTGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS GCA 72 bp | CTCCACAAACCAGTAGTGGAAGTGCTTGGAGTCCGATaGTCTGAGGTAGCCGGAGTATTGCCGGAAAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: LHKPVVEVLGVR*SEVAGVLPERG Trigger: CCCTCTTTCCGGCAATACTCCGGCTACCTCAGAGCATCGGACTCCAAGCACTTCCACTACTGGTTTGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS CCA 72 bp | ACCCCCGTTAAGCCAAAGCACCACGGGGCTGTTCTTTaGGTCGTTCTGCGACTCCACAAACCAGTAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPVKPKHHGAVL*VVLRLHKPVVE Trigger: TTCCACTACTGGTTTGTGGAGTCGCAGAACGACCCAAAGAACAGCCCCGTGGTGCTTTGGCTTAACGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS CAA 90 bp | TCTTTGTTCAGGAACCTCGAGAACATGGTAAAAGCAGCTCGAGGCTaGTCCGTGGGGACCATGTGTCCGGCACCCTTGATGGTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLFRNLENMVKAARG*SVGTMCPAPLMVRK Trigger: CTTCCTCACCATCAAGGGTGCCGGACACATGGTCCCCACGGACAAGCCTCGAGCTGCTTTTACCATGTTCTCGAGGTTCCTGAACAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 72 bp | CATCTTGTCATCCGAGTAGGAGAAGCCCACCCCAGCTaGGGACTCGATATACAGCACGTTGGCAATCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: HLVIRVGEAHPS*GLDIQHVGNQV Trigger: AACCTGATTGCCAACGTGCTGTATATCGAGTCCCCAGCTGGGGTGGGCTTCTCCTACTCGGATGACAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000127650.8 ENSMUST00000143780.9 |
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| CDS TCA 72 bp | GTTACACTTGTTCTGAGCGCAGCAGTGGGTCTGCAGTaGAGTCCAAAGTCTGTTCCCCAGAAGGCCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: VTLVLSAAVGLQ*SPKSVPQKAMV Trigger: TACCATGGCCTTCTGGGGAACAGACTTTGGACTTCACTGCAGACCCACTGCTGCGCTCAGAACAAGTGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 ENSMUST00000143780.9 |
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| CDS GCA 72 bp | AATCCTGGACTACAAGTGTGTCCTCATATCTATGTCTaGCGGGCACCCCACCAGCACACGGAGCATAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: NPGLQVCPHIYV*RAPHQHTEHRD Trigger: ATCTCTATGCTCCGTGTGCTGGTGGGGTGCCCGGCAGACATAGATATGAGGACACACTTGTAGTCCAGGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS TCA 72 bp | CCCCACCAGCACACGGAGCATAGAGATTGTAGATGTTaGGGCCAGATTTGCCCACAATTCGAGACACTTCCA | + |
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Preference number: 6 (lower is better) Translates to: PHQHTEHRDCRC*GQICPQFETLP Trigger: TGGAAGTGTCTCGAATTGTGGGCAAATCTGGCCTCAACATCTACAATCTCTATGCTCCGTGTGCTGGTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 72 bp | AGAACGCATCAGTGCCTCAGGAAATCTCCGCTTAAGTaGCAGGCGAGTGAAGATGTTGCCAAAATCCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: RTHQCLRKSPLK*QASEDVAKILD Trigger: GTCCAGGATTTTGGCAACATCTTCACTCGCCTGCCACTTAAGCGGAGATTTCCTGAGGCACTGATGCGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS TCA 72 bp | CTCCGTTGTAGAGCAGGATCTGGTATTTCTGTGAACTaGGCAGCTTCAGGTACTGGGAGTTCATGCTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LRCRAGSGISVN*AASGTGSSCFG Trigger: ACCAAAGCATGAACTCCCAGTACCTGAAGCTGCTCAGTTCACAGAAATACCAGATCCTGCTCTACAACGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CAA 90 bp | AGTGCCTCAGGAAATCTCCGCTTAAGTGGCAGGCGAGTGAAGATGTaGCCAAAATCCTGGACTACAAGTGTGTCCTCATATCTATGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SASGNLRLSGRRVKM*PKSWTTSVSSYLCL Trigger: CAGACATAGATATGAGGACACACTTGTAGTCCAGGATTTTGGCAACATCTTCACTCGCCTGCCACTTAAGCGGAGATTTCCTGAGGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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| CDS CCA 72 bp | TTAAGTGGCAGGCGAGTGAAGATGTTGCCAAAATCCTaGACTACAAGTGTGTCCTCATATCTATGTCTGCCG | + |
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Preference number: 6 (lower is better) Translates to: LSGRRVKMLPKS*TTSVSSYLCLP Trigger: CGGCAGACATAGATATGAGGACACACTTGTAGTCCAGGATTTTGGCAACATCTTCACTCGCCTGCCACTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103092.9 ENSMUST00000103093.10 |
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