Pregenerated sensors for CTS7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021440Ensembl transcript IDs: ENSMUST00000021892.7, ENSMUST00000224773.2, ENSMUST00000224986.2, ENSMUST00000225321.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTTCCTTCCTTCATACACATAGGCAGCTCACAATGCAGGGTACATaGCATAAGAAGCAATTCCACAGTAGTTGTTCTGACCTCTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LSFLHTHRQLTMQGT*HKKQFHSSCSDLWE Trigger: TTCCCAGAGGTCAGAACAACTACTGTGGAATTGCTTCTTATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAAGGAAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR CCA 90 bp | GATATGAATGAAAGGATGCATGTGAACCATCAATTGCAACAGCAATaGGTCCATGTGTTACTAGAGCTTGCAGTAGAGCTTCTTCATTCC | + |
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Preference number: 1 (lower is better) Translates to: DMNERMHVNHQLQQQ*VHVLLELAVELLHS Trigger: GGAATGAAGAAGCTCTACTGCAAGCTCTAGTAACACATGGACCCATTGCTGTTGCAATTGATGGTTCACATGCATCCTTTCATTCATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR TCA 90 bp | CATCATAAGGTCTGCCTCCATCACAGCCCTTGGTGCCATAAGATACTGAGCAGTGTTTTCTTGAACAGTTaGCCTTCTATGCATGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: HHKVCLHHSPWCHKILSSVFLNS*PSMHAV Trigger: GACTGCATGCATAGAAGGTCAACTGTTCAAGAAAAC...ACTGCTCAGTATCTTATGGCACCAAGGGCTGTGATGGAGGCAGACCTTATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR CCA 90 bp | CATCATAAGGTCTGCCTCCATCACAGCCCTTGGTGCCATAAGATACTGAGCAGTATTCTGTACACTCAGTaGGATCAGTTTGCCAGTTTT | + |
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Preference number: 2 (lower is better) Translates to: HHKVCLHHSPWCHKILSSILYTQ*DQFASF Trigger: AAAACTGGCAAACTGATCCCACTGAGTGTACAGAAT...ACTGCTCAGTATCTTATGGCACCAAGGGCTGTGATGGAGGCAGACCTTATGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR CAA 90 bp | ATATACCTCCCCGATATGAATGAAAGGATGCATGTGAACCATCAATaGCAACAGCAATGGGTCCATGTGTTACTAGAGCTTGCAGTAGAG | + |
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Preference number: 2 (lower is better) Translates to: IYLPDMNERMHVNHQ*QQQWVHVLLELAVE Trigger: CTCTACTGCAAGCTCTAGTAACACATGGACCCATTGCTGTTGCAATTGATGGTTCACATGCATCCTTTCATTCATATCGGGGAGGTATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATACACATAGGCAGCTCACAATGCAGGGTACATGGCATAAGAAGCAATTCCGTACCTGCAGTGTTTTaGCTTTGCTTCATATGGATA | + |
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Preference number: 2 (lower is better) Translates to: FIHIGSSQCRVHGIRSNSVPAVF*LCFIWI Trigger: TATCCATATGAAGCAAAGGCAAAACACTGCAGGTAC...GGAATTGCTTCTTATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTaGCTTAATATCTTTCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: GDTNVFIQQRLAILNRIKFFCMC*LNIFPS Trigger: GGAAGGAAAGATATTAAGGCAACACATACAGAAGAA...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| 3UTR GCA 72 bp | CATTGTTCTTCACATATTGGAAGGCATCATAAGGTCTaGCTCCATCACAGCCCTTGGTGCCATAAGATACTG | + |
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Preference number: 3 (lower is better) Translates to: HCSSHIGRHHKV*LHHSPWCHKIL Trigger: CAGTATCTTATGGCACCAAGGGCTGTGATGGAGGCAGACCTTATGATGCCTTCCAATATGTGAAGAACAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCCTTCCTTCATACACATAGGCAGCTCACAATGCAGGGTACATGGCATACATGTGAACCATCAATaGCAACAGCAATGGGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: IFPSFIHIGSSQCRVHGIHVNHQ*QQQWVH Trigger: ATGGACCCATTGCTGTTGCAATTGATGGTTCACATG...TATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAAGGAAGGAAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR TCA 72 bp | CTCAGTGGGATCAGTTTGCCAGTTTTCTTGAACAGTTaGCCTTCTATGCATGCAGTCACAGAAAAAGCCCAA | + |
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Preference number: 3 (lower is better) Translates to: LSGISLPVFLNS*PSMHAVTEKAQ Trigger: TTGGGCTTTTTCTGTGACTGCATGCATAGAAGGTCAACTGTTCAAGAAAACTGGCAAACTGATCCCACTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR CCA 72 bp | GAAAGGATGCATGTGAACCATCAATTGCAACAGCAATaGGTCCATGTGTTACTAGAGCTTGCAGTAGAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ERMHVNHQLQQQ*VHVLLELAVEL Trigger: AAGCTCTACTGCAAGCTCTAGTAACACATGGACCCATTGCTGTTGCAATTGATGGTTCACATGCATCCTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR GCA 72 bp | CAACCAATAGTAAACCATGGTCGAGAGTATCCTTTCTaGACTTTGGCTCATGATATATACCTCCCCGATATG | + |
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Preference number: 3 (lower is better) Translates to: QPIVNHGREYPF*TLAHDIYLPDM Trigger: CATATCGGGGAGGTATATATCATGAGCCAAAGTGCAGAAAGGATACTCTCGACCATGGTTTACTATTGGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR GCA 72 bp | ATCTTTCCTTCCTTCATACACATAGGCAGCTCACAATaGAGGGTACATGGCATAAGAAGCAATTCCACAGTA | + |
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Preference number: 3 (lower is better) Translates to: IFPSFIHIGSSQ*RVHGIRSNSTV Trigger: TACTGTGGAATTGCTTCTTATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAAGGAAGGAAAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR CCA 72 bp | CATAAGAAGCAATTCCACAGTAGTTGTTCTGACCTCTaGGAAGCTTCATGTAGCCATTTTCTCCCCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: HKKQFHSSCSDL*EASCSHFLPIF Trigger: AAAGATGGGGAGAAAATGGCTACATGAAGCTTCCCAGAGGTCAGAACAACTACTGTGGAATTGCTTCTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR CAA 90 bp | TTCATACACATAGGCAGCTCACAATGCAGGGTACATGGCATAAGAAGCAATTCCCAGAGGCTGGCCATTTaGAATAGGATAAAATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: FIHIGSSQCRVHGIRSNSQRLAI*NRIKFF Trigger: GAAGAATTTTATCCTATTCAAAATGGCCAGCCTCTG...GGAATTGCTTCTTATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR CAA 90 bp | ATCTTTCCTTCCTTCATACACATAGGCAGCTCACAATGCAGGGTACATGGCATATATCCTTTCTGCACTTaGGCTCATGATATATACCTC | + |
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Preference number: 3 (lower is better) Translates to: IFPSFIHIGSSQCRVHGIYPFCT*AHDIYL Trigger: GAGGTATATATCATGAGCCAAAGTGCAGAAAGGATA...TATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAAGGAAGGAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR GCA 72 bp | ATTGCAACAGCAATGGGTCCATGTGTTACTAGAGCTTaGAGTAGAGCTTCTTCATTCCTTGGAACAACAAAA | + |
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Preference number: 3 (lower is better) Translates to: IATAMGPCVTRA*SRASSFLGTTK Trigger: TTTTGTTGTTCCAAGGAATGAAGAAGCTCTACTGCAAGCTCTAGTAACACATGGACCCATTGCTGTTGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATTCACCTTTTTCCCTGTaGTTCGGTGACACAAATGTT | + |
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Preference number: 3 (lower is better) Translates to: LLFGDTNVFIQQRLAILNSPFSL*FGDTNV Trigger: AACATTTGTGTCACCGAACAACAGGGAAAAAGGTGA...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGTTTTCTTGAACAGTaGACCTTCTATGCATGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LLFGDTNVFIQQRLAILNSFLEQ*TFYACS Trigger: ACTGCATGCATAGAAGGTCAACTGTTCAAGAAAACT...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATCAAATTGTAATCAGGTaGTGGAGCAGCCAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNQIVIR*WSSQGH Trigger: GTGGCCTTGGCTGCTCCAGCACCTGATTACAATTTG...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | ACTTTGGCTCATGATATATACCTCCCCGATATGAATGAAAGGATGCATGTGAACCAAATTGTAATCAGGTaGTGGAGCAGCCAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLAHDIYLPDMNERMHVNQIVIR*WSSQGH Trigger: GTGGCCTTGGCTGCTCCAGCACCTGATTACAATTTG...GTTCACATGCATCCTTTCATTCATATCGGGGAGGTATATATCATGAGCCAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATTCCCTGTCTTCGCACTaGAGTCACATAGCCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNSLSSH*SHIAFL Trigger: AAGGAAGGCTATGTGACTCCAGTGCGAAGACAGGGA...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATCTCCATCACAGCCCTTaGTGCCATAAGATACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNLHHSP*CHKILS Trigger: GCTCAGTATCTTATGGCACCAAGGGCTGTGATGGAG...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| 3UTR CAA 72 bp | ACTCAGTGGGATCAGTTTGCCAGTTTTCTTGAACAGTaGACCTTCTATGCATGCAGTCACAGAAAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TQWDQFASFLEQ*TFYACSHRKSP Trigger: TGGGCTTTTTCTGTGACTGCATGCATAGAAGGTCAACTGTTCAAGAAAACTGGCAAACTGATCCCACTGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATTGTATGTTCTGTCATTaGTCCTCTTCCACTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNCMFCH*SSSTPP Trigger: GGGAGGAGTGGAAGAGGAGCAATGACAGAACATACA...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAATTGTAATCAGGTGCTaGAGCAGCCAAGGCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKIVIRC*SSQGHS Trigger: GGAGTGGCCTTGGCTGCTCCAGCACCTGATTACAAT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATCCCCATCTTTCACCATaGCTGTTCTTTAGCAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNPHLSP*LFFSSQ Trigger: TTGGCTGCTAAAGAACAGCCATGGTGAAAGATGGGG...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| 3UTR CAA 72 bp | CCCGATATGAATGAAAGGATGCATGTGAACCATCAATaGCAACAGCAATGGGTCCATGTGTTACTAGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PDMNERMHVNHQ*QQQWVHVLLEL Trigger: AAGCTCTAGTAACACATGGACCCATTGCTGTTGCAATTGATGGTTCACATGCATCCTTTCATTCATATCGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCATTGTAATCAGGTGCTaGAGCAGCCAAGGCCACTCC | + |
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Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNIIVIRC*SSQGHS Trigger: GGAGTGGCCTTGGCTGCTCCAGCACCTGATTACAAT...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | TTCATACACATAGGCAGCTCACAATGCAGGGTACATGGCATAAGAAGCAATTCCCTGTTTTTCTTCCTCTaGGCTGTATGTTCTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: FIHIGSSQCRVHGIRSNSLFFFL*AVCSVI Trigger: AATGACAGAACATACAGCCCAGAGGAAGAAAAACAG...GGAATTGCTTCTTATGCCATGTACCCTGCATTGTGAGCTGCCTATGTGTATGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGTTGTTCTGACCTCTaGGAAGCTTCATGTAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNSCSDL*EASCSH Trigger: ATGGCTACATGAAGCTTCCCAGAGGTCAGAACAACT...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATCATTCATTTCTATGGTaGAGTTGTTCATCCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNHSFLW*SCSSTG Trigger: GCCTGTGGATGAACAACTTCACCATAGAAATGAATG...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATGTTTGCCAGTTTTCTTaGACAGTTGACCTTCTATGC | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNVCQFS*TVDLLC Trigger: GCATAGAAGGTCAACTGTTCAAGAAAACTGGCAAAC...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAACCTCCCCGATATGAATaGAAGGATGCATGTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKPPRYE*KDACEP Trigger: TGGTTCACATGCATCCTTTCATTCATATCGGGGAGG...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCCAAATTGTAATCAGGTaGTGGAGCAGCCAAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNIQIVIR*WSSQGH Trigger: GTGGCCTTGGCTGCTCCAGCACCTGATTACAATTTG...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAATGTATGTTCTGTCATTaGTCCTCTTCCACTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKCMFCH*SSSTPP Trigger: GGGAGGAGTGGAAGAGGAGCAATGACAGAACATACA...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATTTGACCTTCTATGCATaGAGTCACAGAAAAAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNLTFYA*SHRKSP Trigger: TGGGCTTTTTCTGTGACTGCATGCATAGAAGGTCAA...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATTTGGGGTTGCGTTTCTaGATGTGTTTCCCATTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNLGLRF*MCFPFL Trigger: AAGAAATGGGAAACACATCCAGAAACGCAACCCCAA...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCCTCCATCACAGCCCTTaGTGCCATAAGATACTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNILHHSP*CHKILS Trigger: GCTCAGTATCTTATGGCACCAAGGGCTGTGATGGAG...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCCCTCCCCGATATGAATaGAAGGATGCATGTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNIPPRYE*KDACEP Trigger: TGGTTCACATGCATCCTTTCATTCATATCGGGGAGG...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAATATTTCCTGTTCTCTaGCTCATGGCCTTCATAGCC | + |
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Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKIFPVL*LMAFIA Trigger: GGCTATGAAGGCCATGAGTCAGAGAACAGGAAATAT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATCTGTTTTTCTTCCTCTaGGCTGTATGTTCTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: LLFGDTNVFIQQRLAILNLFFFL*AVCSVI Trigger: AATGACAGAACATACAGCCCAGAGGAAGAAAAACAG...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAATGCCTTTGCTTCATATaGATAGGTTGCCTCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKCLCFI*IGCLSF Trigger: GAAGCTGAGGCAACCTATCCATATGAAGCAAAGGCA...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| 3UTR CAA 72 bp | ATAGTAAACCATGGTCGAGAGTATCCTTTCTGCACTTaGGCTCATGATATATACCTCCCCGATATGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: IVNHGREYPFCT*AHDIYLPDMNE Trigger: TTCATTCATATCGGGGAGGTATATATCATGAGCCAAAGTGCAGAAAGGATACTCTCGACCATGGTTTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR TCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAACATTCATTTCTATGGTaGAGTTGTTCATCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKHSFLW*SCSSTG Trigger: GCCTGTGGATGAACAACTTCACCATAGAAATGAATG...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAGTTTTCTTGAACAGTTaGCCTTCTATGCATGCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKVFLNS*PSMHAV Trigger: GACTGCATGCATAGAAGGTCAACTGTTCAAGAAAAC...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR TCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAATGAAAGGATGCATGTaGACCATCAATTGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKMKGCM*TINCNS Trigger: GCTGTTGCAATTGATGGTTCACATGCATCCTTTCAT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAATTTCCTTCCCACACTaGTCTCCTCTGTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKISFPH*SPLFFF Trigger: GAAGAAAAACAGAGGAGAGCAGTGTGGGAAGGAAAT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCTGCCTTTGCTTCATATaGATAGGTTGCCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNICLCFI*IGCLSF Trigger: GAAGCTGAGGCAACCTATCCATATGAAGCAAAGGCA...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCAGTTGTTCTGACCTCTaGGAAGCTTCATGTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNISCSDL*EASCSH Trigger: ATGGCTACATGAAGCTTCCCAGAGGTCAGAACAACT...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCATTTCCTTCCCACACTaGTCTCCTCTGTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNIISFPH*SPLFFF Trigger: GAAGAAAAACAGAGGAGAGCAGTGTGGGAAGGAAAT...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | CACCAGTCTTCACAGAAAAGAACATCAAGACTCCATTTAAACAATAAAACAGCAATTTCCTTCCCACACTaGTCTCCTCTGTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HQSSQKRTSRLHLNNKTAISFPH*SPLFFF Trigger: GAAGAAAAACAGAGGAGAGCAGTGTGGGAAGGAAAT...TGCTGTTTTATTGTTTAAATGGAGTCTTGATGTTCTTTTCTGTGAAGACTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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| CDS-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAACAGTTGACCTTCTATaGATGCAGTCACAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKTVDLL*MQSQKK Trigger: CTTTTTCTGTGACTGCATGCATAGAAGGTCAACTGT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAGTACCTGCAGTGTTTTaGCTTTGCTTCATATGGATA | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKVPAVF*LCFIWI Trigger: TATCCATATGAAGCAAAGGCAAAACACTGCAGGTAC...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAATGTGTTACTAGAGCTTaGAGTAGAGCTTCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKCVTRA*SRASSF Trigger: GAATGAAGAAGCTCTACTGCAAGCTCTAGTAACACA...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAACGAGAGTATCCTTTCTaGACTTTGGCTCATGATATA | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKREYPF*TLAHDI Trigger: TATATCATGAGCCAAAGTGCAGAAAGGATACTCTCG...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAACTGTTTTTCTTCCTCTaGGCTGTATGTTCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKLFFFL*AVCSVI Trigger: AATGACAGAACATACAGCCCAGAGGAAGAAAAACAG...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAATTCTGTACACTCAGTaGGATCAGTTTGCCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDTNVFIQQRLAILNRIKILYTQ*DQFASF Trigger: AAAACTGGCAAACTGATCCCACTGAGTGTACAGAAT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCACAATGCAGGGTACATaGCATAAGAAGCAATTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNITMQGT*HKKQFH Trigger: GTGGAATTGCTTCTTATGCCATGTACCCTGCATTGT...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR GCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCACAGTTGACCTTCTATaGATGCAGTCACAGAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNITVDLL*MQSQKK Trigger: CTTTTTCTGTGACTGCATGCATAGAAGGTCAACTGT...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCTGTGTTACTAGAGCTTaGAGTAGAGCTTCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNICVTRA*SRASSF Trigger: GAATGAAGAAGCTCTACTGCAAGCTCTAGTAACACA...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
||
| CDS-3UTR GCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCCGAGAGTATCCTTTCTaGACTTTGGCTCATGATATA | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNIREYPF*TLAHDI Trigger: TATATCATGAGCCAAAGTGCAGAAAGGATACTCTCG...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CCA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCATCCTTTCTGCACTTTaGCTCATGATATATACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAILNRIKFFCMCCLNIILSAL*LMIYTS Trigger: GGAGGTATATATCATGAGCCAAAGTGCAGAAAGGAT...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| 3UTR CAA 72 bp | GACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTaGAATAGGATAAAATTCTTCTGTATGTGTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTNVFIQQRLAI*NRIKFFCMCCL Trigger: AAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS GCA 90 bp | GCTCCTCTTCCACTCCTCCCACTCGGCATCCAAATTGTAATCAGGTaGTGGAGCAGCCAAGGCCACTCCCAAGCACAGGATGGACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: APLPLLPLGIQIVIR*WSSQGHSQAQDGQE Trigger: TTCCTGTCCATCCTGTGCTTGGGAGTGGCCTTGGCTGCTCCAGCACCTGATTACAATTTGGATGCCGAGTGGGAGGAGTGGAAGAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 ENSMUST00000225321.2 |
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| CDS GCA 90 bp | CTGCTCTCCTCTGTTTTTCTTCCTCTGGGCTGTATGTTCTGTCATTaGTCCTCTTCCACTCCTCCCACTCGGCATCCAAATTGTAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSSVFLPLGCMFCH*SSSTPPTRHPNCNQ Trigger: CTGATTACAATTTGGATGCCGAGTGGGAGGAGTGGAAGAGGAGCAATGACAGAACATACAGCCCAGAGGAAGAAAAACAGAGGAGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 ENSMUST00000225321.2 |
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| CDS GCA 90 bp | ATTTCTATGGTGAAGTTGTTCATCCACAGGCCATTCTCCATAATGTaGTGTTTGATCCATTTCACATTTCCTTCCCACACTGCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ISMVKLFIHRPFSIM*CLIHFTFPSHTALL Trigger: GAGGAGAGCAGTGTGGGAAGGAAATGTGAAATGGATCAAACAGCACATTATGGAGAATGGCCTGTGGATGAACAACTTCACCATAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 ENSMUST00000225321.2 |
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| CDS-3UTR CAA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATCATGTGAACCATCAATaGCAACAGCAATGGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LLFGDTNVFIQQRLAILNHVNHQ*QQQWVH Trigger: ATGGACCCATTGCTGTTGCAATTGATGGTTCACATG...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATGCTTCTAGACCTCCATaGTTCTTCACATATTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLFGDTNVFIQQRLAILNASRPP*FFTYWK Trigger: CTTCCAATATGTGAAGAACAATGGAGGTCTAGAAGC...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAGGTACCTGCAGTGTTTaGCCTTTGCTTCATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GDTNVFIQQRLAILNRIKGTCSV*PLLHMD Trigger: ATCCATATGAAGCAAAGGCAAAACACTGCAGGTACC...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAACATGTGAACCATCAATaGCAACAGCAATGGGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GDTNVFIQQRLAILNRIKHVNHQ*QQQWVH Trigger: ATGGACCCATTGCTGTTGCAATTGATGGTTCACATG...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATTCCATAATGTGCTGTTaGATCCATTTCACATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLFGDTNVFIQQRLAILNSIMCC*IHFTFP Trigger: AGGAAATGTGAAATGGATCAAACAGCACATTATGGA...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | CTGTTGTTCGGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATATTGTTCTTCACATATaGGAAGGCATCATAAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LLFGDTNVFIQQRLAILNIVLHI*EGIIRS Trigger: AGACCTTATGATGCCTTCCAATATGTGAAGAACAAT...ATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACCGAACAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAGCTTCTAGACCTCCATaGTTCTTCACATATTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GDTNVFIQQRLAILNRIKASRPP*FFTYWK Trigger: CTTCCAATATGTGAAGAACAATGGAGGTCTAGAAGC...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCGGTACCTGCAGTGTTTaGCCTTTGCTTCATATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLAILNRIKFFCMCCLNIGTCSV*PLLHMD Trigger: ATCCATATGAAGCAAAGGCAAAACACTGCAGGTACC...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
||
| CDS-3UTR CAA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAAAGTTTTCTTGAACAGTaGACCTTCTATGCATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GDTNVFIQQRLAILNRIKSFLEQ*TFYACS Trigger: ACTGCATGCATAGAAGGTCAACTGTTCAAGAAAACT...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | GGTGACACAAATGTTTTTATACAGCAGAGGCTGGCCATTTTGAATAGGATAAAATATCCTTTCTGCACTTaGGCTCATGATATATACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDTNVFIQQRLAILNRIKYPFCT*AHDIYL Trigger: GAGGTATATATCATGAGCCAAAGTGCAGAAAGGATA...TTTTATCCTATTCAAAATGGCCAGCCTCTGCTGTATAAAAACATTTGTGTCACC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 |
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| CDS-3UTR CAA 90 bp | CACCAGTCTTCACAGAAAAGAACATCAAGACTCCATTTAAACAATAAAACAGCATCCATAATGTGCTGTTaGATCCATTTCACATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HQSSQKRTSRLHLNNKTASIMCC*IHFTFP Trigger: AGGAAATGTGAAATGGATCAAACAGCACATTATGGA...TGCTGTTTTATTGTTTAAATGGAGTCTTGATGTTCTTTTCTGTGAAGACTGGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTGGCCATTTTGAATAGGATAAAATTCTTCTGTATGTGTTGCCTTAATATCTCCATAATGTGCTGTTaGATCCATTTCACATTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RLAILNRIKFFCMCCLNISIMCC*IHFTFP Trigger: AGGAAATGTGAAATGGATCAAACAGCACATTATGGA...GATATTAAGGCAACACATACAGAAGAATTTTATCCTATTCAAAATGGCCAGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 |
||
| CDS GCA 72 bp | CCACTCCTCCCACTCGGCATCCAAATTGTAATCAGGTaGTGGAGCAGCCAAGGCCACTCCCAAGCACAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLPLGIQIVIR*WSSQGHSQAQD Trigger: ATCCTGTGCTTGGGAGTGGCCTTGGCTGCTCCAGCACCTGATTACAATTTGGATGCCGAGTGGGAGGAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 ENSMUST00000225321.2 |
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| CDS GCA 72 bp | TCTGTTTTTCTTCCTCTGGGCTGTATGTTCTGTCATTaGTCCTCTTCCACTCCTCCCACTCGGCATCCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SVFLPLGCMFCH*SSSTPPTRHPN Trigger: ATTTGGATGCCGAGTGGGAGGAGTGGAAGAGGAGCAATGACAGAACATACAGCCCAGAGGAAGAAAAACAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 ENSMUST00000225321.2 |
||
| CDS GCA 72 bp | GTGAAGTTGTTCATCCACAGGCCATTCTCCATAATGTaGTGTTTGATCCATTTCACATTTCCTTCCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: VKLFIHRPFSIM*CLIHFTFPSHT Trigger: AGTGTGGGAAGGAAATGTGAAATGGATCAAACAGCACATTATGGAGAATGGCCTGTGGATGAACAACTTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021892.7 ENSMUST00000224773.2 ENSMUST00000224986.2 ENSMUST00000225321.2 |
||
| CDS CAA 90 bp | GTCACACTCACCATATCACCAAATTCATTCATTTCTATGGTGAAGTaGTTCATCCACAGGCCATTCTCCATAATGTGCTGTTTGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VTLTISPNSFISMVK*FIHRPFSIMCCLIH Trigger: ATGGATCAAACAGCACATTATGGAGAATGGCCTGTGGATGAACAACTTCACCATAGAAATGAATGAATTTGGTGATATGGTGAGTGTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
||
| CDS CAA 90 bp | TCTTCACCAGTCATATCACCAAATTCATTCATTTCTATGGTGAAGTaGTTCATCCACAGGCCATTCTCCATAATGTGCTGTTTGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SSPVISPNSFISMVK*FIHRPFSIMCCLIH Trigger: ATGGATCAAACAGCACATTATGGAGAATGGCCTGTGGATGAACAACTTCACCATAGAAATGAATGAATTTGGTGATATGACTGGTGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 ENSMUST00000225321.2 |
||
| CDS CAA 72 bp | GTCATATCACCAAATTCATTCATTTCTATGGTGAAGTaGTTCATCCACAGGCCATTCTCCATAATGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VISPNSFISMVK*FIHRPFSIMCC Trigger: ACAGCACATTATGGAGAATGGCCTGTGGATGAACAACTTCACCATAGAAATGAATGAATTTGGTGATATGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021892.7 ENSMUST00000224986.2 ENSMUST00000225321.2 |
||
| CDS CAA 72 bp | ACCATATCACCAAATTCATTCATTTCTATGGTGAAGTaGTTCATCCACAGGCCATTCTCCATAATGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TISPNSFISMVK*FIHRPFSIMCC Trigger: ACAGCACATTATGGAGAATGGCCTGTGGATGAACAACTTCACCATAGAAATGAATGAATTTGGTGATATGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224773.2 |
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