Pregenerated sensors for CTPS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028633Ensembl transcript IDs: ENSMUST00000030381.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCACTCCAATGACAGTGACTCGAGTGGCTGGAAAACAAGGTGGTTaGTGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCCATCC | + |
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Preference number: 1 (lower is better) Translates to: FTPMTVTRVAGKQGG*WPLTTASSHHQVPS Trigger: GGATGGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCCAGCCACTCGAGTCACTGTCATTGGAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR CCA 90 bp | GCAATTCACTCCAATGACAGTGACTCGAGTGGCTGGAAAACAAGGTaGTTGATGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: AIHSNDSDSSGWKTR*LMALNHSQQPPSGS Trigger: GGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCCAGCCACTCGAGTCACTGTCATTGGAGTGAATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR CCA 90 bp | AGGGAGACAACAGCAATTCACTCCAATGACAGTGACTCGAGTGGCTaGAAAACAAGGTGGTTGATGGCCCTTAACCACAGCCAGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RETTAIHSNDSDSSG*KTRWLMALNHSQQP Trigger: TGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCCAGCCACTCGAGTCACTGTCATTGGAGTGAATTGCTGTTGTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR TCA 90 bp | CCAGAGACCCGGGGTTTTTATATGATACTTTATACAGACAGAGTTTaGTGTACCAAAGAACCAAACAACCCTCTGGATGGCGAGGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: PETRGFYMILYTDRV*CTKEPNNPLDGEGN Trigger: GTTGCCCTCGCCATCCAGAGGGTTGTTTGGTTCTTTGGTACATCAAACTCTGTCTGTATAAAGTATCATATAAAAACCCCGGGTCTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR GCA 90 bp | AGGTTCCATCCAGAGTCCTGTTTCCCATCACAGAAGCACAAAAACTaGAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCAA | + |
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Preference number: 1 (lower is better) Translates to: RFHPESCFPSQKHKN*KGIIVAQIHVLQDQ Trigger: TTGATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTGATGGGAAACAGGACTCTGGATGGAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR TCA 90 bp | GTATTATTGTCGCACAAATACATGTGTTGCAGGATCAAGTATAAATaGCGGGACATGCAAGTGACAAAGTTTTCCAAATGCTTTTCCCCC | + |
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Preference number: 1 (lower is better) Translates to: VLLSHKYMCCRIKYK*RDMQVTKFSKCFSP Trigger: GGGGGAAAAGCATTTGGAAAACTTTGTCACTTGCATGTCCCGTCATTTATACTTGATCCTGCAACACATGTATTTGTGCGACAATAATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR CAA 90 bp | ATTCACTCCAATGACAGTGACTCGAGTGGCTGGAAAACAAGGTGGTaGATGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCCATC | + |
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Preference number: 2 (lower is better) Translates to: IHSNDSDSSGWKTRW*MALNHSQQPPSGSI Trigger: GATGGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCCAGCCACTCGAGTCACTGTCATTGGAGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGCCAGAGACCCGGGGTTTTTATATGATACTTTATACAGACAGAGTTTGATGGGAAAACAAGGTGGTTaGTGGCCCTTAACCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: VARDPGFLYDTLYRQSLMGKQGG*WPLTTA Trigger: GGCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCC...CATCAAACTCTGTCTGTATAAAGTATCATATAAAAACCCCGGGTCTCTGGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR-3UTR CAA 90 bp | GTCAGCAACACCCAGTTAGCAGCCCAGCACCGGGAGTCCTGGCACCCCAGGGAGACTGCAAAGGTATTATaGTCGCACAAATACATGTGT | + |
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Preference number: 3 (lower is better) Translates to: VSNTQLAAQHRESWHPRETAKVL*SHKYMC Trigger: ACACATGTATTTGTGCGACAATAATACCTTTGCAGT...CTCCCTGGGGTGCCAGGACTCCCGGTGCTGGGCTGCTAACTGGGTGTTGCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR CCA 72 bp | TCCAATGACAGTGACTCGAGTGGCTGGAAAACAAGGTaGTTGATGGCCCTTAACCACAGCCAGCAGCCACCA | + |
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Preference number: 3 (lower is better) Translates to: SNDSDSSGWKTR*LMALNHSQQPP Trigger: TGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCCAGCCACTCGAGTCACTGTCATTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR CCA 72 bp | ACAGCAATTCACTCCAATGACAGTGACTCGAGTGGCTaGAAAACAAGGTGGTTGATGGCCCTTAACCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: TAIHSNDSDSSG*KTRWLMALNHS Trigger: GCTGTGGTTAAGGGCCATCAACCACCTTGTTTTCCAGCCACTCGAGTCACTGTCATTGGAGTGAATTGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR TCA 72 bp | TCGCACAAATACATGTGTTGCAGGATCAAGTATAAATaGCGGGACATGCAAGTGACAAAGTTTTCCAAATGC | + |
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Preference number: 3 (lower is better) Translates to: SHKYMCCRIKYK*RDMQVTKFSKC Trigger: GCATTTGGAAAACTTTGTCACTTGCATGTCCCGTCATTTATACTTGATCCTGCAACACATGTATTTGTGCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| 3UTR TCA 72 bp | AATAGAAAGTGTAGCCAGAGACCCGGGGTTTTTATATaGTACTTTATACAGACAGAGTTTGATGTACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: NRKCSQRPGVFI*YFIQTEFDVPK Trigger: CTTTGGTACATCAAACTCTGTCTGTATAAAGTATCATATAAAAACCCCGGGTCTCTGGCTACACTTTCTATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | GTCAGCAACACCCAGTTAGCAGCCCAGCACCGGGAGTCCTGGCACCCCAGGGAGACTGAGTTCTTGGTCTaGAACAGGGTTCTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VSNTQLAAQHRESWHPRETEFLV*NRVLLL Trigger: CAAGAGGAGAACCCTGTTCCAGACCAAGAACTCAGT...CTCCCTGGGGTGCCAGGACTCCCGGTGCTGGGCTGCTAACTGGGTGTTGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | AAAACAAGGTGGTTGATGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCCCCGAGTCGGGGGAGCTaGTCCCGCTTCTGTCACTGT | + |
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Preference number: 4 (lower is better) Translates to: KTRWLMALNHSQQPPSGSPSRGS*SRFCHC Trigger: ACAGTGACAGAAGCGGGAGCAGCTCCCCCGACTCGG...GGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | GTCAGCAACACCCAGTTAGCAGCCCAGCACCGGGAGTCCTGGCACCCCAGGGAGGATTATTGTCCTTGGTaGGACGGATATCAAGGAATC | + |
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Preference number: 4 (lower is better) Translates to: VSNTQLAAQHRESWHPREDYCPW*DGYQGI Trigger: GATTCCTTGATATCCGTCTCACCAAGGACAATAATC...CTCCCTGGGGTGCCAGGACTCCCGGTGCTGGGCTGCTAACTGGGTGTTGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGGAACCAGCACTCCATaGGCACTGCAGAGCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: TTASSHHQVPSRVLFPITGTSTP*ALQSFC Trigger: GCAGAAGCTCTGCAGTGCTCATGGAGTGCTGGTTCC...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | GTCAGCAACACCCAGTTAGCAGCCCAGCACCGGGAGTCCTGGCACCCCAGGGAGTCAGTCCTGACTTATTaGTGGAAACTTGAGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSNTQLAAQHRESWHPRESVLTY*WKLEFS Trigger: ACTGAACTCAAGTTTCCATCAATAAGTCAGGACTGA...CTCCCTGGGGTGCCAGGACTCCCGGTGCTGGGCTGCTAACTGGGTGTTGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGAACAGGGTTCTCCTCTTaGCCAGCCTCATGGTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRTGFSS*PASWFH Trigger: GTGGAACCATGAGGCTGGGCAAGAGGAGAACCCTGT...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGACTTCTGTTCCCCTGTTaGACTTGGCTGAGGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRLLFPC*TWLRNQ Trigger: CTGGTTCCTCAGCCAAGTTCAACAGGGGAACAGAAG...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | ATGCAAGGAGTTTTCTCAGCCCCAGGAATAGAAAGTGTAGCCAGAGACCCGGGGTCTTGCCCAGCCTCATaGTTCCACCCATTTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: MQGVFSAPGIESVARDPGSCPAS*FHPFAQ Trigger: CTGGGCAAATGGGTGGAACCATGAGGCTGGGCAAGA...CCCCGGGTCTCTGGCTACACTTTCTATTCCTGGGGCTGAGAAAACTCCTTGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | ATGCAAGGAGTTTTCTCAGCCCCAGGAATAGAAAGTGTAGCCAGAGACCCGGGGCCTGTTGAACTTGGCTaGGGAACCAGACTGACATGG | + |
|
Preference number: 4 (lower is better) Translates to: MQGVFSAPGIESVARDPGPVELG*GTRLTW Trigger: CCATGTCAGTCTGGTTCCTCAGCCAAGTTCAACAGG...CCCCGGGTCTCTGGCTACACTTTCTATTCCTGGGGCTGAGAAAACTCCTTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGACAGGAACTCGGGGTaGTACTGCACTCCAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: TTASSHHQVPSRVLFPITDRNSG*YCTPTK Trigger: TTTTGTTGGAGTGCAGTATCACCCCGAGTTCCTGTC...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACACACCCACTCTTGGATTaGATCAGTGATGTGAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TTASSHHQVPSRVLFPITHPLLD*ISDVRD Trigger: GTCCCTCACATCACTGATGCAATCCAAGAGTGGGTG...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGATCTACCACTGCTAGCTaGATTCCTAAGCACACACCC | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRSTTAS*IPKHTP Trigger: GGGTGTGTGCTTAGGAATGCAGCTAGCAGTGGTAGA...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGATTCACCTCAAATCGGTaGCGGTGCCTTTCTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRFTSNR*RCLSSK Trigger: CTTGGAAGAAAGGCACCGCCACCGATTTGAGGTGAA...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGATCGCCTTCCACATCTTaGCCAACGAACTTCAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRSPSTS*PTNFKP Trigger: AGGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGA...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | ATGCAAGGAGTTTTCTCAGCCCCAGGAATAGAAAGTGTAGCCAGAGACCCGGGGACCTTGAACTGGAACTaGCGGAAGGCCTCAATGAAG | + |
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Preference number: 4 (lower is better) Translates to: MQGVFSAPGIESVARDPGTLNWN*RKASMK Trigger: CTTCATTGAGGCCTTCCGCCAGTTCCAGTTCAAGGT...CCCCGGGTCTCTGGCTACACTTTCTATTCCTGGGGCTGAGAAAACTCCTTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | ATGCAAGGAGTTTTCTCAGCCCCAGGAATAGAAAGTGTAGCCAGAGACCCGGGGAACACCAAATCCTCCTaGAACCAGCACTCCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: MQGVFSAPGIESVARDPGNTKSS*NQHSMS Trigger: GCTCATGGAGTGCTGGTTCCAGGAGGATTTGGTGTT...CCCCGGGTCTCTGGCTACACTTTCTATTCCTGGGGCTGAGAAAACTCCTTGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGACATCAGCATCTTTCGTaGCTGTCTCTCAATAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRHQHLS*LSLNRK Trigger: CTTCCTATTGAGAGACAGTCACGAAAGATGCTGATG...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACATCAATAACACACACTTaGGGTTCTAAGCCATCTTCG | + |
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Preference number: 4 (lower is better) Translates to: TTASSHHQVPSRVLFPITSITHT*GSKPSS Trigger: CGAAGATGGCTTAGAACCTCAAGTGTGTGTTATTGA...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | AAAACAAGGTGGTTGATGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCCAGAATTTGGTGTATTTaGCCACAAGAGCGATCGAGC | + |
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Preference number: 4 (lower is better) Translates to: KTRWLMALNHSQQPPSGSRIWCI*PQERSS Trigger: GCTCGATCGCTCTTGTGGGCAAATACACCAAATTCT...GGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGGTATATCTTCCCTGTaGTCAGATTATTGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: TTASSHHQVPSRVLFPITGISSL*SDYCPW Trigger: CCAAGGACAATAATCTGACCACAGGGAAGATATACC...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGAACGAGTCTGAGAATTTaGTGTATTTGCCCACAAGAG | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRTSLRI*CICPQE Trigger: CTCTTGTGGGCAAATACACCAAATTCTCAGACTCGT...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACATCCTTTTCCAATTCCTaGTATAACACCACCAGTAAC | + |
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Preference number: 4 (lower is better) Translates to: TTASSHHQVPSRVLFPITSFSNS*YNTTSN Trigger: GTTACTGGTGGTGTTATATCAGGAATTGGAAAAGGA...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | AAAACAAGGTGGTTGATGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCCTACCCGGTAGATGGATaGAACATCATGAACACAGAT | + |
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Preference number: 4 (lower is better) Translates to: KTRWLMALNHSQQPPSGSYPVDG*NIMNTD Trigger: ATCTGTGTTCATGATGTTTCATCCATCTACCGGGTA...GGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGATTGTTAATGACGTACTaGTATATCTTCCCTGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRLLMTY*YIFPVV Trigger: GACCACAGGGAAGATATACCAGTACGTCATTAACAA...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | CACAGAAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCGCAGAGCTTCTGCCATaGCTCATGGTAGCGCACAGG | + |
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Preference number: 4 (lower is better) Translates to: HRSTKTAKVLLSHKYMCCAELLP*LMVAHR Trigger: CCTGTGCGCTACCATGAGGCATGGCAGAAGCTCTGC...GCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | CACAGAAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCGAGGCCAAAGTAGGGTaGGGAGGGCTTGATAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HRSTKTAKVLLSHKYMCCEAKVG*GGLDRP Trigger: AGGCCTATCAAGCCCTCCCCACCCTACTTTGGCCTC...GCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | AGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCTTTCTGAAGGTAATGTaGGAGCCGCCCCACAGAGGC | + |
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Preference number: 4 (lower is better) Translates to: STKTAKVLLSHKYMCCRIFLKVM*EPPHRG Trigger: GCCTCTGTGGGGCGGCTCCCACATTACCTTCAGAAA...GATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | AGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCCCACACTGCTGGCGATaGCTCCTTTTCCAATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: STKTAKVLLSHKYMCCRIPHCWR*LLFQFL Trigger: CAGGAATTGGAAAAGGAGTCATCGCCAGCAGTGTGG...GATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | AAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATGCACTCCATGAGCACTaGAGAGCTTCTGCCATGCCT | + |
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Preference number: 4 (lower is better) Translates to: KHKNCKGIIVAQIHVLQDALHEH*RASAMP Trigger: AGGCATGGCAGAAGCTCTGCAGTGCTCATGGAGTGC...ATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | AAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATGGCGGAAGGCCTCAATaGAGGGCATGCTTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: KHKNCKGIIVAQIHVLQDGGRPQ*RACFQC Trigger: ACATTGAAAGCATGCCCTTCATTGAGGCCTTCCGCC...ATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | GTAGCCAGAGACCCGGGGTTTTTATATGATACTTTATACAGACAGAGTTTGATGGAGTTTCCTCATGACTaGGTTCTTGGTCTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: VARDPGFLYDTLYRQSLMEFPHD*VLGLEQ Trigger: CTGTTCCAGACCAAGAACTCAGTCATGAGGAAACTC...CATCAAACTCTGTCTGTATAAAGTATCATATAAAAACCCCGGGTCTCTGGCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR GCA 90 bp | CACAGAAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCGAGGATTTGAGCACCTaGACACCACTAAGTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: HRSTKTAKVLLSHKYMCCEDLST*TPLSLE Trigger: CTCCAGACTTAGTGGTGTGCAGGTGCTCAAATCCTC...GCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | AAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCTCTTGACCTTGAACTaGAACTGGCGGAAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: KHKNCKGIIVAQIHVLQDLLTLN*NWRKAS Trigger: TGAGGCCTTCCGCCAGTTCCAGTTCAAGGTCAAGAG...ATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | AGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCTCCCGAACACTGTTCTaGGTGGGTTTTGTCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: STKTAKVLLSHKYMCCRISRTLF*VGFVFC Trigger: ACAGAAGACAAAACCCACCCAGAACAGTGTTCGGGA...GATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCGCTGAGGAACCAGACTaGCATGGATATTACAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRSTKTAKVLLSHKYMCCAEEPD*HGYYKS Trigger: ACTTTTGTAATATCCATGTCAGTCTGGTTCCTCAGC...GCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR TCA 90 bp | AGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCATGGATGAAACATCATaGACACAGATCACTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STKTAKVLLSHKYMCCRIMDETS*TQITCS Trigger: TGAACAAGTGATCTGTGTTCATGATGTTTCATCCAT...GATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CCA 90 bp | AGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCTGTTCAGGTTCCACATaGCAAAACATTGATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: STKTAKVLLSHKYMCCRICSGST*QNIDIF Trigger: GAAAATATCAATGTTTTGCCATGTGGAACCTGAACA...GATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 90 bp | CCGAGTCGGGGGAGCTGCTCCCGCTTCTGTCACTGTAAGTGTCCCTaGGTGAGAGCCGGCAACCTTTCTGAAGGTAATGTGGGAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PSRGSCSRFCHCKCP*VRAGNLSEGNVGAA Trigger: GGCGGCTCCCACATTACCTTCAGAAAGGTTGCCGGCTCTCACCCAGGGACACTTACAGTGACAGAAGCGGGAGCAGCTCCCCCGACTCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | GTCAGCAACACCCAGTTAGCAGCCCAGCACCGGGAGTCCTGGCACCCCAGGGAGCATGGTTCCACCCATTaGCCCAGGGTTATGTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSNTQLAAQHRESWHPREHGSTH*PRVMFW Trigger: CCAGAACATAACCCTGGGCAAATGGGTGGAACCATG...CTCCCTGGGGTGCCAGGACTCCCGGTGCTGGGCTGCTAACTGGGTGTTGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | GTCAGCAACACCCAGTTAGCAGCCCAGCACCGGGAGTCCTGGCACCCCAGGGAGTGTAGAATTGGCATCTaGCCATCCCAGCACATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSNTQLAAQHRESWHPRECRIGI*PSQHIS Trigger: AGAAATGTGCTGGGATGGCAAGATGCCAATTCTACA...CTCCCTGGGGTGCCAGGACTCCCGGTGCTGGGCTGCTAACTGGGTGTTGCTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 90 bp | CTGCCATGCCTCATGGTAGCGCACAGGCTCTTCCTGCAGGGTACTTaGCTCCAGGTCTGTGGAATCGATGTACTTGATCTCCAGCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPCLMVAHRLFLQGT*LQVCGIDVLDLQLV Trigger: CACAAGCTGGAGATCAAGTACATCGATTCCACAGACCTGGAGCCAAGTACCCTGCAGGAAGAGCCTGTGCGCTACCATGAGGCATGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | AAAACAAGGTGGTTGATGGCCCTTAACCACAGCCAGCAGCCACCATCAGGTTCCTCTTCTGTTCCCCTGTaGAACTTGGCTGAGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: KTRWLMALNHSQQPPSGSSSVPL*NLAEEP Trigger: TGGTTCCTCAGCCAAGTTCAACAGGGGAACAGAAGA...GGAACCTGATGGTGGCTGCTGGCTGTGGTTAAGGGCCATCAACCACCTTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | CACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAGAATGTGTCAAGAGGATTaGAGCACCTGCACACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: HSQQPPSGSIQSPVSHHRMCQED*STCTPL Trigger: TAGTGGTGTGCAGGTGCTCAAATCCTCTTGACACAT...TCTGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS GCA 90 bp | TCCATCCTCTCGCCTTCCACATCTTGGCCAACGAACTTCAAGCCTTaGTCTTCCAAGCACTTTTTCAGGACTGGGTTCACCTCAAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SILSPSTSWPTNFKP*SSKHFFRTGFTSNR Trigger: CCGATTTGAGGTGAACCCAGTCCTGAAAAAGTGCTTGGAAGAGCAAGGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGAGAGGATGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | ACCACAGCCAGCAGCCACCATCAGGTTCCATCCAGAGTCCTGTTTCCCATCACAATGAACACAGATCACTaGTTCAGGTTCCACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TTASSHHQVPSRVLFPITMNTDH*FRFHMA Trigger: TGCCATGTGGAACCTGAACAAGTGATCTGTGTTCAT...TGTGATGGGAAACAGGACTCTGGATGGAACCTGATGGTGGCTGCTGGCTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | ATGCAAGGAGTTTTCTCAGCCCCAGGAATAGAAAGTGTAGCCAGAGACCCGGGGTCAAACTCTGTAGAATaGGCATCTTGCCATCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MQGVFSAPGIESVARDPGSNSVE*ASCHPS Trigger: GCTGGGATGGCAAGATGCCAATTCTACAGAGTTTGA...CCCCGGGTCTCTGGCTACACTTTCTATTCCTGGGGCTGAGAAAACTCCTTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 90 bp | CTTGGCTCCAGGTCTGTGGAATCGATGTACTTGATCTCCAGCTTGTaGTTAATGGCCAATGCAGAGTGCTCTAGCGCTTTAATGACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGSRSVESMYLISSL*LMANAECSSALMTE Trigger: CTCTGTCATTAAAGCGCTAGAGCACTCTGCATTGGCCATTAACCACAAGCTGGAGATCAAGTACATCGATTCCACAGACCTGGAGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS TCA 90 bp | CTTTCAATGTCTCCCACTGTGCCACCAAGCTCAATAACACACACTTaGGGTTCTAAGCCATCTTCGTCTACGGGTATTAATGCCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSMSPTVPPSSITHT*GSKPSSSTGINACL Trigger: GAGACAGGCATTAATACCCGTAGACGAAGATGGCTTAGAACCTCAAGTGTGTGTTATTGAGCTTGGTGGCACAGTGGGAGACATTGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | AGACAGAGTTTGATGTACCAAAGAACCAAACAACCCTCTGGATGGCGAGGGCAATACTTGATCTCCAGCTaGTGGTTAATGGCCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RQSLMYQRTKQPSGWRGQYLISS*WLMANA Trigger: TGCATTGGCCATTAACCACAAGCTGGAGATCAAGTA...TTGCCCTCGCCATCCAGAGGGTTGTTTGGTTCTTTGGTACATCAAACTCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | AAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATCTCGCCTTCCACATCTaGGCCAACGAACTTCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KHKNCKGIIVAQIHVLQDLAFHI*ANELQA Trigger: GGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGAG...ATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | CACAGAAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCCCTGTGGTCAGATTATaGTCCTTGGTGAGACGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HRSTKTAKVLLSHKYMCCPVVRL*SLVRRI Trigger: TATCCGTCTCACCAAGGACAATAATCTGACCACAGG...GCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | CACAGAAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCTCTCATCACCCACTCTaGGATTGCATCAGTGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: HRSTKTAKVLLSHKYMCCSHHPL*DCISDV Trigger: CACATCACTGATGCAATCCAAGAGTGGGTGATGAGA...GCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTTCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | GTAGCCAGAGACCCGGGGTTTTTATATGATACTTTATACAGACAGAGTTTGATGAGCCCAAGCAATTGCTaGAATTTTTCCTTCTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VARDPGFLYDTLYRQSLMSPSNC*NFSFCS Trigger: GGAACAGAAGGAAAAATTCAAGCAATTGCTTGGGCT...CATCAAACTCTGTCTGTATAAAGTATCATATAAAAACCCCGGGTCTCTGGCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | GTAGCCAGAGACCCGGGGTTTTTATATGATACTTTATACAGACAGAGTTTGATGAACGAACTTCAAGCCTaGCTCTTCCAAGCACTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: VARDPGFLYDTLYRQSLMNELQA*LFQALF Trigger: AAAAAGTGCTTGGAAGAGCAAGGCTTGAAGTTCGTT...CATCAAACTCTGTCTGTATAAAGTATCATATAAAAACCCCGGGTCTCTGGCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS-3UTR CAA 90 bp | AAGCACAAAAACTGCAAAGGTATTATTGTCGCACAAATACATGTGTTGCAGGATGTCAGATTATTGTCCTaGGTGAGACGGATATCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KHKNCKGIIVAQIHVLQDVRLLS*VRRISR Trigger: CCTTGATATCCGTCTCACCAAGGACAATAATCTGAC...ATCCTGCAACACATGTATTTGTGCGACAATAATACCTTTGCAGTTTTTGTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 72 bp | CTCATGGTAGCGCACAGGCTCTTCCTGCAGGGTACTTaGCTCCAGGTCTGTGGAATCGATGTACTTGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: LMVAHRLFLQGT*LQVCGIDVLDL Trigger: GAGATCAAGTACATCGATTCCACAGACCTGGAGCCAAGTACCCTGCAGGAAGAGCCTGTGCGCTACCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 72 bp | AACTCCACGATCTCCATCCTCTCGCCTTCCACATCTTaGCCAACGAACTTCAAGCCTTGCTCTTCCAAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NSTISILSPSTS*PTNFKPCSSKH Trigger: GTGCTTGGAAGAGCAAGGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGAGAGGATGGAGATCGTGGAGTT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 72 bp | CAACTCCACGATCTCCATCCTCTCGCCTTCCACATCTaGGCCAACGAACTTCAAGCCTTGCTCTTCCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QLHDLHPLAFHI*ANELQALLFQA Trigger: TGCTTGGAAGAGCAAGGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGAGAGGATGGAGATCGTGGAGTTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS GCA 72 bp | GTTCTCCTCTTGCCCAGCCTCATGGTTCCACCCATTTaGCCAGGGTTATGTTCTGGCATGTCTATAACCACA | + |
|
Preference number: 6 (lower is better) Translates to: VLLLPSLMVPPI*PGLCSGMSITT Trigger: TGTGGTTATAGACATGCCAGAACATAACCCTGGGCAAATGGGTGGAACCATGAGGCTGGGCAAGAGGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS GCA 72 bp | TCGCCTTCCACATCTTGGCCAACGAACTTCAAGCCTTaGTCTTCCAAGCACTTTTTCAGGACTGGGTTCACC | + |
|
Preference number: 6 (lower is better) Translates to: SPSTSWPTNFKP*SSKHFFRTGFT Trigger: GGTGAACCCAGTCCTGAAAAAGTGCTTGGAAGAGCAAGGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS GCA 72 bp | TCTCTTTCACAGATGTGTCAAGAGGATTTGAGCACCTaGACACCACTAAGTCTGGAGAAAGCCCGAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SLSQMCQEDLST*TPLSLEKARVL Trigger: GAGGACTCGGGCTTTCTCCAGACTTAGTGGTGTGCAGGTGCTCAAATCCTCTTGACACATCTGTGAAAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 72 bp | GAAAGCCCGAGTCCTCTAAGTTCCCGAACACTGTTCTaGGTGGGTTTTGTCTTCTGTTCCCCTGTTGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: ESPSPLSSRTLF*VGFVFCSPVEL Trigger: AAGTTCAACAGGGGAACAGAAGACAAAACCCACCCAGAACAGTGTTCGGGAACTTAGAGGACTCGGGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CCA 72 bp | AATTTTTCCTTCTGTTCCCCGAACACCAAATCCTCCTaGAACCAGCACTCCATGAGCACTGCAGAGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: NFSFCSPNTKSS*NQHSMSTAELL Trigger: CAGAAGCTCTGCAGTGCTCATGGAGTGCTGGTTCCAGGAGGATTTGGTGTTCGGGGAACAGAAGGAAAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 72 bp | TCCAGGTCTGTGGAATCGATGTACTTGATCTCCAGCTaGTGGTTAATGGCCAATGCAGAGTGCTCTAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SRSVESMYLISS*WLMANAECSSA Trigger: AGCGCTAGAGCACTCTGCATTGGCCATTAACCACAAGCTGGAGATCAAGTACATCGATTCCACAGACCTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 90 bp | ATGATCTTCCAACTCCACGATCTCCATCCTCTCGCCTTCCACATCTaGGCCAACGAACTTCAAGCCTTGCTCTTCCAAGCACTTTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: MIFQLHDLHPLAFHI*ANELQALLFQALFQ Trigger: CTGAAAAAGTGCTTGGAAGAGCAAGGCTTGAAGTTCGTTGGCCAAGATGTGGAAGGCGAGAGGATGGAGATCGTGGAGTTGGAAGATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 90 bp | GTACTTGGCTCCAGGTCTGTGGAATCGATGTACTTGATCTCCAGCTaGTGGTTAATGGCCAATGCAGAGTGCTCTAGCGCTTTAATGACA | + |
|
Preference number: 6 (lower is better) Translates to: VLGSRSVESMYLISS*WLMANAECSSALMT Trigger: TGTCATTAAAGCGCTAGAGCACTCTGCATTGGCCATTAACCACAAGCTGGAGATCAAGTACATCGATTCCACAGACCTGGAGCCAAGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 90 bp | GGCAAAACATTGATATTTTCTCTTTCACAGATGTGTCAAGAGGATTaGAGCACCTGCACACCACTAAGTCTGGAGAAAGCCCGAGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKTLIFSLSQMCQED*STCTPLSLEKARVL Trigger: GAGGACTCGGGCTTTCTCCAGACTTAGTGGTGTGCAGGTGCTCAAATCCTCTTGACACATCTGTGAAAGAGAAAATATCAATGTTTTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS TCA 72 bp | TCTCCCACTGTGCCACCAAGCTCAATAACACACACTTaGGGTTCTAAGCCATCTTCGTCTACGGGTATTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SPTVPPSSITHT*GSKPSSSTGIN Trigger: ATTAATACCCGTAGACGAAGATGGCTTAGAACCTCAAGTGTGTGTTATTGAGCTTGGTGGCACAGTGGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS TCA 72 bp | AAAGGCTTCTTCTGTTTCCGAGCCCAAGCAATTGCTTaGATTTTTCCTTCTGTTCCCCGAACACCAAATCCT | + |
|
Preference number: 6 (lower is better) Translates to: KGFFCFRAQAIA*IFPSVPRTPNP Trigger: AGGATTTGGTGTTCGGGGAACAGAAGGAAAAATTCAAGCAATTGCTTGGGCTCGGAAACAGAAGAAGCCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 72 bp | ATGACGTACTGGTATATCTTCCCTGTGGTCAGATTATaGTCCTTGGTGAGACGGATATCAAGGAATCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: MTYWYIFPVVRL*SLVRRISRNRS Trigger: TGAGCGATTCCTTGATATCCGTCTCACCAAGGACAATAATCTGACCACAGGGAAGATATACCAGTACGTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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| CDS CAA 72 bp | TTGATATTTTCTCTTTCACAGATGTGTCAAGAGGATTaGAGCACCTGCACACCACTAAGTCTGGAGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LIFSLSQMCQED*STCTPLSLEKA Trigger: GGCTTTCTCCAGACTTAGTGGTGTGCAGGTGCTCAAATCCTCTTGACACATCTGTGAAAGAGAAAATATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030381.8 |
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