Pregenerated sensors for CTNS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005949Ensembl transcript IDs: ENSMUST00000006103.9, ENSMUST00000108476.8
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCATACTGTTCCAGCCCTGTGTGCCAGCTGCTTCTCTGGCCTTTaGTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: WHTVPALCASCFSGL*WIQPFLPGPRPWLF Trigger: AAACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGCTGGAACAGTATGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | CATACTGTTCCAGCCCTGTGTGCCAGCTGCTTCTCTGGCCTTTGCTaGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTTTACA | + |
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Preference number: 1 (lower is better) Translates to: HTVPALCASCFSGLC*IQPFLPGPRPWLFT Trigger: TGTAAACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGCTGGAACAGTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR TCA 90 bp | GCCCAGTTCTGGCTGGGATGGCTGTCTGGACCTGTGTGTGCTGCCTaGAGCCTTAAAGAGAGAGAGATGGTATATCAAGACGCAGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: AQFWLGWLSGPVCAA*SLKEREMVYQDAGG Trigger: CCCTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAAGGCTTCAGGCAGCACACACAGGTCCAGACAGCCATCCCAGCCAGAACTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR GCA 90 bp | GAATGCTGCTCTTGTTGGCATACTGTTCCAGCCCTGTGTGCCAGCTaGTTCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCC | + |
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Preference number: 1 (lower is better) Translates to: ECCSCWHTVPALCAS*FSGLCWIQPFLPGP Trigger: GGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGCTGGAACAGTATGCCAACAAGAGCAGCATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | GTCTCAAGCAGAGTCAGGTGTCTGTTCCAGAGAGGGAGTCCTCCATaGTTCAGGAGAGGCCTGGATGAAGACAGGCAGGCTGAGCTTAAG | + |
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Preference number: 1 (lower is better) Translates to: VSSRVRCLFQRGSPP*FRRGLDEDRQAELK Trigger: CTTAAGCTCAGCCTGCCTGTCTTCATCCAGGCCTCTCCTGAACCATGGAGGACTCCCTCTCTGGAACAGACACCTGACTCTGCTTGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR TCA 90 bp | CCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATaGTGCCCAGTTCTGGCTGGGATGGCTGTCTGGACCTGTGTGTGC | + |
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Preference number: 1 (lower is better) Translates to: PRNIGALGQGHQLQT*CPVLAGMAVWTCVC Trigger: GCACACACAGGTCCAGACAGCCATCCCAGCCAGAACTGGGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR TCA 90 bp | CACACCCTGGTTCCTTCCCTACCTGGCGTAGGAAGAATAATGGGATaGGAAGGAAGGAGGTGTGGGATCAGGGTGGGACCACAAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: HTLVPSLPGVGRIMG*EGRRCGIRVGPQAT Trigger: TGTTGCTTGTGGTCCCACCCTGATCCCACACCTCCTTCCTTCTCATCCCATTATTCTTCCTACGCCAGGTAGGGAAGGAACCAGGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | TGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCAGCAGAGGGCTaGAGCTTTAAAGTTGGGAGAGACTGCCTCAAGTCTAGCTTTCAG | + |
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Preference number: 1 (lower is better) Translates to: WYIKTQEGWVPPAEG*SFKVGRDCLKSSFQ Trigger: CTGAAAGCTAGACTTGAGGCAGTCTCTCCCAACTTTAAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | CAAAGATCCGGAGGGCAGCAGGTACGGGTCCACTTCAGACCAATCTaGCAGGCACCTCAGGGATCAGAAATATACTTTACCAGGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: QRSGGQQVRVHFRPI*QAPQGSEIYFTRHW Trigger: CCAGTGCCTGGTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCCCTCCGGATCTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR GCA 90 bp | AAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTaGAAACATGATGCCCAGTTCTGGCTGGGATGGCTGTCTGGACCT | + |
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Preference number: 1 (lower is better) Translates to: KLLPEILVLWGKVIS*KHDAQFWLGWLSGP Trigger: AGGTCCAGACAGCCATCCCAGCCAGAACTGGGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | GAAGCCTTAAAGAGAGAGAGATGGTATATCAAGACGCAGGAGGGCTaGGTGCCTCCAGCAGAGGGCTGGAGCTTTAAAGTTGGGAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: EALKRERWYIKTQEG*VPPAEGWSFKVGRD Trigger: GTCTCTCCCAACTTTAAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAAGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR GCA 90 bp | AGGAAGAGAATGCTGCTCTTGTTGGCATACTGTTCCAGCCCTGTGTaGCAGCTGCTTCTCTGGCCTTTGCTGGATACAACCTTTCCTACC | + |
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Preference number: 1 (lower is better) Translates to: RKRMLLLLAYCSSPV*QLLLWPLLDTTFPT Trigger: GGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGCTGGAACAGTATGCCAACAAGAGCAGCATTCTCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR TCA 90 bp | GGCCTGGATGAAGACAGGCAGGCTGAGCTTAAGGCTTTTGATTCTTaGGGAAGAGAATGCTGCTCTTGTTGGCATACTGTTCCAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: GLDEDRQAELKAFDS*GRECCSCWHTVPAL Trigger: CAGGGCTGGAACAGTATGCCAACAAGAGCAGCATTCTCTTCCTCAAGAATCAAAAGCCTTAAGCTCAGCCTGCCTGTCTTCATCCAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR GCA 90 bp | CCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTaGTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PSCKVSFSSCSQKYW*FGARSSAANMMPSS Trigger: AGAACTGGGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | TCTCCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTaGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SPSCKVSFSSCSQKY*CFGARSSAANMMPS Trigger: ACTGGGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | GCAGGCACCTCAGGGATCAGAAATATACTTTACCAGGCACTGGCCTaGGCCTCTTGTTCTGCAGTTACTAGAGCAGCGTTATATAGAATG | + |
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Preference number: 1 (lower is better) Translates to: AGTSGIRNILYQALA*ASCSAVTRAALYRM Trigger: CATTCTATATAACGCTGCTCTAGTAACTGCAGAACAAGAGGCCCAGGCCAGTGCCTGGTAAAGTATATTTCTGATCCCTGAGGTGCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CCA 90 bp | ATCTGGCAGGCACCTCAGGGATCAGAAATATACTTTACCAGGCACTaGCCTGGGCCTCTTGTTCTGCAGTTACTAGAGCAGCGTTATATA | + |
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Preference number: 1 (lower is better) Translates to: IWQAPQGSEIYFTRH*PGPLVLQLLEQRYI Trigger: TATATAACGCTGCTCTAGTAACTGCAGAACAAGAGGCCCAGGCCAGTGCCTGGTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR GCA 90 bp | CACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTGCCCTGTGTGCCAGCTaGTTCTCTGGCCTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HQHQHLQVHGPQHLAAWSALCAS*FSGLCW Trigger: CCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGC...AGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR GCA 90 bp | ACCACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTGCCCTGTGTGCCAGCTaGTTCTCTGGCCTTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TTSISTFKSMGHSTWLLGALCAS*FSGLCW Trigger: CCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGC...ACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | TTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGAAGACGCAGGAGGGCTaGGTGCCTCCAGCAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LRGVWGLKMVLHPTLRKWKTQEG*VPPAEG Trigger: GCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTT...CCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATAGAGGGAGTCCTCCATaGTTCAGGAGAGGCCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: EGSRYGSTSDQSGRHLRDRGSPP*FRRGLD Trigger: ATCCAGGCCTCTCCTGAACCATGGAGGACTCCCTCT...ATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CAA 90 bp | TTGGCATACTGTTCCAGCCCTGTGTGCCAGCTGCTTCTCTGGCCTTaGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTT | + |
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Preference number: 2 (lower is better) Translates to: LAYCSSPVCQLLLWP*LDTTFPTRAQALAV Trigger: AACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGCTGGAACAGTATGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CAA 90 bp | CCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTaGGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PASAPSSPWATAPGC*VSVNTVVGQSTLGS Trigger: AGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCCGCAGGAGGGCTGGGTaGCTCCAGCAGAGGGCTGGA | + |
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Preference number: 2 (lower is better) Translates to: LPEILVLWGKVISCKHDARRRAG*LQQRAG Trigger: TCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCG...GGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGTGCCAGCTGCTTCTCTaGCCTTTGCTGGATACAACC | + |
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Preference number: 2 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQCQLLL*PLLDTT Trigger: GGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCA...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR CAA 90 bp | CGCAGGAGGGCTGGGTGCCTCCAGCAGAGGGCTGGAGCTTTAAAGTaGGGAGAGACTGCCTCAAGTCTAGCTTTCAGTCTCAAGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RRRAGCLQQRAGALK*GETASSLAFSLKQS Trigger: ACTCTGCTTGAGACTGAAAGCTAGACTTGAGGCAGTCTCTCCCAACTTTAAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR TCA 90 bp | CACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCCTGTGTGTGCTGCCTaGAGCCTTAAAGAGAGAGAG | + |
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Preference number: 2 (lower is better) Translates to: HQHQHLQVHGPQHLAAWSPVCAA*SLKERE Trigger: CTCTCTCTCTTTAAGGCTTCAGGCAGCACACACAGG...AGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGGTTCAGGAGAGGCCTaGATGAAGACAGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GLCEHCGGTKHPWLSQLQGSGEA*MKTGRL Trigger: CAGCCTGCCTGTCTTCATCCAGGCCTCTCCTGAACC...TTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | ACCACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCCTCCAGCAGAGGGCTaGAGCTTTAAAGTTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: TTSISTFKSMGHSTWLLGPPAEG*SFKVGR Trigger: TCTCCCAACTTTAAAGCTCCAGCCCTCTGCTGGAGG...ACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGGTTGCTGGGATGGCTGTCTaGACCTGTGTGTGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SVNTVVGQSTLGSPSCKVAGMAV*TCVCCL Trigger: CAGGCAGCACACACAGGTCCAGACAGCCATCCCAGC...AACCTTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGAGGTAGGAAAGAGGGCGGTTCAGGAGAGGCCTaGATGAAGACAGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: DSRWCSIRLSESGGRKEGGSGEA*MKTGRL Trigger: CAGCCTGCCTGTCTTCATCCAGGCCTCTCCTGAACC...GCCCTCTTTCCTACCTCCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGAGGTAGGAAAGAGGGCATGCCCAGTTCTGGCTaGGATGGCTGTCTGGACCTG | + |
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Preference number: 2 (lower is better) Translates to: DSRWCSIRLSESGGRKEGMPSSG*DGCLDL Trigger: CAGGTCCAGACAGCCATCCCAGCCAGAACTGGGCAT...GCCCTCTTTCCTACCTCCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGGAAATATTGGTGCTTTaGGGCAAGGTCATCAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQEILVL*GKVISC Trigger: GCAGCTGATGACCTTGCCCCAAAGCACCAATATTTC...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGTGCTCCCAGAAATATTaGTGCTTTGGGGCAAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQCSQKY*CFGARS Trigger: TGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCA...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTCCAGGGCCCAGGCCCTaGCTGTTTACACTGGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SFSSCSQKYWCFGARSSAPGPRP*LFTLGL Trigger: GAGACCCAGTGTAAACAGCCAGGGCCTGGGCCCTGG...AGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGAAGACGCAGGAGGGCTaGGTGCCTCCAGCAGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: LPVARLAFQAAPRNIGALKTQEG*VPPAEG Trigger: GCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTT...CAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCGCTGGGATGGCTGTCTaGACCTGTGTGTGCTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LPEILVLWGKVISCKHDAAGMAV*TCVCCL Trigger: CAGGCAGCACACACAGGTCCAGACAGCCATCCCAGC...GGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | GACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGAGGTAGGAAAGAGGGCCAGTTCTGGCTGGGATaGCTGTCTGGACCTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: DSRWCSIRLSESGGRKEGQFWLG*LSGPVC Trigger: ACACACAGGTCCAGACAGCCATCCCAGCCAGAACTG...GCCCTCTTTCCTACCTCCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAATGGGCCACAGCACCTaGCTGCTTGGTCTCTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKMGHST*LLGLCE Trigger: TTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCAT...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTGGCAAGGTCATCAGCTaGAAACATGATGCCCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGGKVIS*KHDAQF Trigger: GAACTGGGCATCATGTTTGCAGCTGATGACCTTGCC...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAACACTTCAGACCAATCTaGCAGGCACCTCAGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKHFRPI*QAPQGS Trigger: TGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTG...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR GCA 90 bp | TCCATAGGTGTAAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGCTTGGCTCTCCCAGTTaGAAGGTTAGCTTTTCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SIGVRLRGVWGLKMVLHPLGSPS*KVSFSS Trigger: GCTTGAAAAGCTAACCTTGCAACTGGGAGAGCCAAG...CGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTTACACCTATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR GCA 90 bp | GGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAAATATACTTTACGCCACAGCACCTGGCTaGTTGGTCTCTGTGAACACT | + |
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Preference number: 2 (lower is better) Translates to: GPLQTNLAGTSGIRNILYATAPG*LVSVNT Trigger: AGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGC...GTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTTTCTCTGGCCTTTGCTaGATACAACCTTTCCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGFSGLC*IQPFLP Trigger: TGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAA...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTAAGGCTTTTGATTCTTaGGGAAGAGAATGCTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGKAFDS*GRECCS Trigger: AGAGCAGCATTCTCTTCCTCAAGAATCAAAAGCCTT...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR GCA 90 bp | TTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGGTTAGCTTTTCAAGCTaGTCCCAGAAATATTGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LRGVWGLKMVLHPTLRKWVSFSS*SQKYWC Trigger: GCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAAC...CCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCCTTAAAGAGAGAGAGATGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCAAGGCTTTTGATTCTTaGGGAAGAGAATGCTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLKEREMVYQDAGGLGASKAFDS*GRECCS Trigger: AGAGCAGCATTCTCTTCCTCAAGAATCAAAAGCCTT...GGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGAATGCTGCTCTTGTTaGCATACTGTTCCAGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SFSSCSQKYWCFGARSSAECCSC*HTVPAL Trigger: CAGGGCTGGAACAGTATGCCAACAAGAGCAGCATTC...AGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTTTAAAGAGAGAGAGATaGTATATCAAGACGCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGLKRER*YIKTQE Trigger: CTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAA...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCTTCTCTGGCCTTTGCTaGATACAACCTTTCCTACCA | + |
|
Preference number: 2 (lower is better) Translates to: LPEILVLWGKVISCKHDAFSGLC*IQPFLP Trigger: TGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAA...GGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGGTTTTAAAGAGAGAGAGATaGTATATCAAGACGCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: SVNTVVGQSTLGSPSCKVLKRER*YIKTQE Trigger: CTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAA...AACCTTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR TCA 72 bp | GTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTaGACACTGTGGTGGGACAAAGCACCCTTGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VHGPQHLAAWSL*TLWWDKAPLAL Trigger: GAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | GGCAAGGTCATCAGCTGCAAACATGATGCCCAGTTCTaGCTGGGATGGCTGTCTGGACCTGTGTGTGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GKVISCKHDAQF*LGWLSGPVCAA Trigger: GGCAGCACACACAGGTCCAGACAGCCATCCCAGCCAGAACTGGGCATCATGTTTGCAGCTGATGACCTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR GCA 72 bp | TCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTaGTTGGTCTCTGTGAACACTGTGGTGGGACAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SAPSSPWATAPG*LVSVNTVVGQS Trigger: GCTTTGTCCCACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | AGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTaGCTGCTTGGTCTCTGTGAACACTGTGGTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SISTFKSMGHST*LLGLCEHCGGT Trigger: TGTCCCACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR GCA 72 bp | GAGAGAGATGGTATATCAAGACGCAGGAGGGCTGGGTaGCTCCAGCAGAGGGCTGGAGCTTTAAAGTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: ERDGISRRRRAG*LQQRAGALKLG Trigger: TCCCAACTTTAAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | AGGTCATCAGCTGCAAACATGATGCCCAGTTCTGGCTaGGATGGCTGTCTGGACCTGTGTGTGCTGCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RSSAANMMPSSG*DGCLDLCVLPE Trigger: TTCAGGCAGCACACACAGGTCCAGACAGCCATCCCAGCCAGAACTGGGCATCATGTTTGCAGCTGATGACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | GGAGGGCAGCAGGTACGGGTCCACTTCAGACCAATCTaGCAGGCACCTCAGGGATCAGAAATATACTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: GGQQVRVHFRPI*QAPQGSEIYFT Trigger: GGTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGAGGTAGGAAAGAGGGCCTGCTCCCAGAAATATaGGTGCTTTGGGGCAAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DSRWCSIRLSESGGRKEGLLPEI*VLWGKV Trigger: GACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAG...GCCCTCTTTCCTACCTCCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR GCA 72 bp | CCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTaGAAACATGATGCCCAGTTCTGGCTGGGATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PEILVLWGKVIS*KHDAQFWLGWL Trigger: CAGCCATCCCAGCCAGAACTGGGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | AAGAGAGAGAGATGGTATATCAAGACGCAGGAGGGCTaGGTGCCTCCAGCAGAGGGCTGGAGCTTTAAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: KRERWYIKTQEG*VPPAEGWSFKV Trigger: AACTTTAAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGCTGGAGCTTTAAAGTaGGGAGAGACTGCCTCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKAGALK*GETASS Trigger: ACTTGAGGCAGTCTCTCCCAACTTTAAAGCTCCAGC...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTGAGCTTAAGGCTTTaGATTCTTGAGGAAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: TTSISTFKSMGHSTWLLGLSLRL*ILEEEN Trigger: ATTCTCTTCCTCAAGAATCAAAAGCCTTAAGCTCAG...ACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR GCA 72 bp | TCTTGTTGGCATACTGTTCCAGCCCTGTGTGCCAGCTaGTTCTCTGGCCTTTGCTGGATACAACCTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: SCWHTVPALCAS*FSGLCWIQPFL Trigger: TAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACACAGGGCTGGAACAGTATGCCAACAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | GCACCTCAGGGATCAGAAATATACTTTACCAGGCACTaGCCTGGGCCTCTTGTTCTGCAGTTACTAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: APQGSEIYFTRH*PGPLVLQLLEQ Trigger: CTGCTCTAGTAACTGCAGAACAAGAGGCCCAGGCCAGTGCCTGGTAAAGTATATTTCTGATCCCTGAGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCCTGCTTCTCTGGCCTTaGCTGGATACAACCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPEILVLWGKVISCKHDALLLWP*LDTTFP Trigger: AGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAG...GGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTCTGCTTCTCTGGCCTTaGCTGGATACAACCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SFSSCSQKYWCFGARSSALLLWP*LDTTFP Trigger: AGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAG...AGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | TCAGGGATCAGAAATATACTTTACCAGGCACTGGCCTaGGCCTCTTGTTCTGCAGTTACTAGAGCAGCGTTA | + |
|
Preference number: 3 (lower is better) Translates to: SGIRNILYQALA*ASCSAVTRAAL Trigger: TAACGCTGCTCTAGTAACTGCAGAACAAGAGGCCCAGGCCAGTGCCTGGTAAAGTATATTTCTGATCCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CCA 72 bp | TGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTaGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: CKVSFSSCSQKY*CFGARSSAANM Trigger: CATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR GCA 72 bp | AAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTaGTTTGGGGCAAGGTCATCAGCTGCAAACATGATG | + |
|
Preference number: 3 (lower is better) Translates to: KVSFSSCSQKYW*FGARSSAANMM Trigger: CATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTCTGAGCTTAAGGCTTTaGATTCTTGAGGAAGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: SFSSCSQKYWCFGARSSALSLRL*ILEEEN Trigger: ATTCTCTTCCTCAAGAATCAAAAGCCTTAAGCTCAG...AGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGGGAGCACACCGCCAATaGTCCAGCCCTTGGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQGAHRQ*SSPWCF Trigger: AAAGCACCAAGGGCTGGAGCATTGGCGGTGTGCTCC...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTACTGGAGCCATGTGGTaGTACCGACTGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SLAFAGYNLSYQGPGPGCTGAMW*YRLQPQ Trigger: TTGTGGCTGCAGTCGGTATCACCACATGGCTCCAGT...ACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAGATGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCAGCAGAGGGCTGGTACCAGGAAGCCAATaGAGGGCCATGACACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: REMVYQDAGGLGASSRGLVPGSQ*RAMTHA Trigger: AGCGTGTGTCATGGCCCTCCATTGGCTTCCTGGTAC...CAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CAA 72 bp | GCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTaGGTCTCTGTGAACACTGTGGTGGGACAAAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: APSSPWATAPGC*VSVNTVVGQST Trigger: GGTGCTTTGTCCCACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAGACAGACCACGCCATaGAGTAGATCCAGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQRQTTP*SRSSQS Trigger: TGATTGGCTGGATCTACTTCATGGCGTGGTCTGTCT...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCGACAGCATGCAAGCTaGAGAAGGCATCATTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGSRYGSTSDQSGRHLRDRQHAS*RRHHYC Trigger: ACAGTAATGATGCCTTCTTCAGCTTGCATGCTGTCG...ATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAACTGGAGCCATGTGGTaGTACCGACTGCAGCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GLCEHCGGTKHPWLSQLQTGAMW*YRLQPQ Trigger: TTGTGGCTGCAGTCGGTATCACCACATGGCTCCAGT...TTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | ACCACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTTCATACAGGCAGCACTaGAGGATGACAATCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTSISTFKSMGHSTWLLGSYRQH*RMTIRV Trigger: CACCCTGATTGTCATCCTGCAGTGCTGCCTGTATGA...ACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTTTACACTGTACCAGGAAGCCAATaGAGGGCCATGACACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLLDTTFPTRAQALAVYTVPGSQ*RAMTHA Trigger: AGCGTGTGTCATGGCCCTCCATTGGCTTCCTGGTAC...AGTGTAAACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | ACCACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTAAGCAGAAGAGGAACTaGAGCCATGTGGTGATACCG | + |
|
Preference number: 4 (lower is better) Translates to: TTSISTFKSMGHSTWLLGKQKRN*SHVVIP Trigger: CGGTATCACCACATGGCTCCAGTTCCTCTTCTGCTT...ACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGACTGGAGGAACATCTaGAGGAGGCTAAAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLCEHCGGTKHPWLSQLQDWRNI*RRLKLP Trigger: GGGCAGCTTTAGCCTCCTCCAGATGTTCCTCCAGTC...TTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGCGACAGCATGCAAGCTaGAGAAGGCATCATTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSGLCWIQPFLPGPRPWLRQHAS*RRHHYC Trigger: ACAGTAATGATGCCTTCTTCAGCTTGCATGCTGTCG...CAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | CCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTTTACACTGTGAGGGCGACAGCATaGAAGCTGAAGAAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PLLDTTFPTRAQALAVYTVRATA*KLKKAS Trigger: TGATGCCTTCTTCAGCTTGCATGCTGTCGCCCTCAC...AGTGTAAACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGAGGTAGGAAAGAGGGCGACTGGAGGAACATCTaGAGGAGGCTAAAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DSRWCSIRLSESGGRKEGDWRNI*RRLKLP Trigger: GGGCAGCTTTAGCCTCCTCCAGATGTTCCTCCAGTC...GCCCTCTTTCCTACCTCCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAAGTCCGAACTTGGTTaGGTCTCCGAAGATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQKSELG*VSEDQC Trigger: ACATTGATCTTCGGAGACCCAACCAAGTTCGGACTT...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAACGCCAAGTCCGAACTTaGTTGGGTCTCCGAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: GLCEHCGGTKHPWLSQLQRQVRT*LGLRRS Trigger: TGATCTTCGGAGACCCAACCAAGTTCGGACTTGGCG...TTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTAGACAGACCACGCCATaGAGTAGATCCAGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGRQTTP*SRSSQS Trigger: TGATTGGCTGGATCTACTTCATGGCGTGGTCTGTCT...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAGATGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCAGCAGAGGGCTGACAAAAGACCGATGTTaGAAACACTGTAGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: REMVYQDAGGLGASSRGLTKDRC*KHCRPR Trigger: TCGTGGCCTACAGTGTTTTCAACATCGGTCTTTTGT...CAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGGTTGTGAGGGCGACAGCATaGAAGCTGAAGAAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SVNTVVGQSTLGSPSCKVVRATA*KLKKAS Trigger: TGATGCCTTCTTCAGCTTGCATGCTGTCGCCCTCAC...AACCTTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTTGCTCCAGCCCTTGGTaGTTTTGTAGTAGAAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLAFAGYNLSYQGPGPGCCSSPW*FCSRSS Trigger: TGAACTTCTACTACAAAAGCACCAAGGGCTGGAGCA...ACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TCCATAGGTGTAAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGGATGTCGACGTTGGTTaGACTGCCATTTTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SIGVRLRGVWGLKMVLHPDVDVG*TAIFQL Trigger: AAGCTGGAAAATGGCAGTTCAACCAACGTCGACATC...CGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTTACACCTATGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGATGTCGACGTTGGTTaGACTGCCATTTTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLCEHCGGTKHPWLSQLQDVDVG*TAIFQL Trigger: AAGCTGGAAAATGGCAGTTCAACCAACGTCGACATC...TTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAACACCATTGGGGTATTTaGGGAGAAACTCCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKHHWGI*GETPPG Trigger: TCCAGGAGGAGTTTCTCCTCAAATACCCCAATGGTG...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAAGGTTCACCATTGGGGTATTTaGGGAGAAACTCCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVNTVVGQSTLGSPSCKVHHWGI*GETPPG Trigger: TCCAGGAGGAGTTTCTCCTCAAATACCCCAATGGTG...AACCTTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTTGGGGCAGGTCTGGTTaGAATGATTTCCATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGWGRSG*NDFHAE Trigger: TTCTGCATGGAAATCATTCCAACCAGACCTGCCCCA...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GTGTGCCAGCTGCTTCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCGTTCTGGATCACTTGTaGGTAAAAGGAGACAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VCQLLLWPLLDTTFPTRAVLDHL*VKGDRP Trigger: TGGTCTGTCTCCTTTTACCCACAAGTGATCCAGAAC...GGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGCAACTGGTCGTACCCTaGTTTCTTTCTGTACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSGLCWIQPFLPGPRPWLQLVVP*FLSVQV Trigger: TACTTGTACAGAAAGAAACCAGGGTACGACCAGTTG...CAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATACTCATACTTCTCTATaGACATCAAGAGAAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EGSRYGSTSDQSGRHLRDTHTSL*TSREKG Trigger: CCCTTTTTCTCTTGATGTTCATAGAGAAGTATGAGT...ATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCAGCAGAGGGCTGGAGCTTTAGTAGAAGTGCTGGATaGAGAAGACAACATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WYIKTQEGWVPPAEGWSFSRSAG*RRQHQR Trigger: TCTTTGATGTTGTCTTCTTCATCCAGCACTTCTACT...AAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGAGCACACCGCCAATaGTCCAGCCCTTGGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVARLAFQAAPRNIGALGAHRQ*SSPWCF Trigger: AAAGCACCAAGGGCTGGAGCATTGGCGGTGTGCTCC...CAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTATCCAGCCAATCACCTaGTTTATGATGCTAACGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLAFAGYNLSYQGPGPGCIQPIT*FMMLTI Trigger: AATCGTTAGCATCATAAACCAGGTGATTGGCTGGAT...ACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTCTGTGAACACTGTGGTGGGACAAAGCACCCTTGGCTCTCCCAGTTGCAACAATGCTCCAGCCCTTaGTGCTTTTGTAGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLCEHCGGTKHPWLSQLQQCSSP*CFCSRS Trigger: ACTTCTACTACAAAAGCACCAAGGGCTGGAGCATTG...TTGCAACTGGGAGAGCCAAGGGTGCTTTGTCCCACCACAGTGTTCACAGAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | CCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGTTTACACTAAGTCCGAACTTGGTTaGGTCTCCGAAGATCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLDTTFPTRAQALAVYTKSELG*VSEDQC Trigger: ACATTGATCTTCGGAGACCCAACCAAGTTCGGACTT...AGTGTAAACAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | CACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTACTTGTCCAATATTTTaGGAAGTCACTTGGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQHQHLQVHGPQHLAAWSTCPIF*EVTWKE Trigger: CTCTTTCCAAGTGACTTCTCAAAATATTGGACAAGT...AGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAACAAAAGACCGATGTTaGAAACACTGTAGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKTKDRC*KHCRPR Trigger: TCGTGGCCTACAGTGTTTTCAACATCGGTCTTTTGT...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCAGCTGCTTCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCAGTAGAAGTGCTGGATaGAGAAGACAACATCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCQLLLWPLLDTTFPTRASRSAG*RRQHQR Trigger: TCTTTGATGTTGTCTTCTTCATCCAGCACTTCTACT...GGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAAGCAGCTGGCACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| 3UTR CAA 72 bp | GCCTGGATGAAGACAGGCAGGCTGAGCTTAAGGCTTTaGATTCTTGAGGAAGAGAATGCTGCTCTTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AWMKTGRLSLRL*ILEEENAALVG Trigger: GCCAACAAGAGCAGCATTCTCTTCCTCAAGAATCAAAAGCCTTAAGCTCAGCCTGCCTGTCTTCATCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAAATATACTTTACTCATACAGGCAGCACTaGAGGATGACAATCAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLQTNLAGTSGIRNILYSYRQH*RMTIRV Trigger: CACCCTGATTGTCATCCTGCAGTGCTGCCTGTATGA...GTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTGCAAACATGATGCCTGGGGCAGGTCTGGTTaGAATGATTTCCATGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LPEILVLWGKVISCKHDAWGRSG*NDFHAE Trigger: TTCTGCATGGAAATCATTCCAACCAGACCTGCCCCA...GGCATCATGTTTGCAGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGTTCCAGAGAGGGAGTCCTCCATGGTTCAGGAGAGGCCTGGATGAAGACAATCCAGCCAATCACCTaGTTTATGATGCTAACGATT | + |
|
Preference number: 4 (lower is better) Translates to: VCSREGVLHGSGEAWMKTIQPIT*FMMLTI Trigger: AATCGTTAGCATCATAAACCAGGTGATTGGCTGGAT...TGTCTTCATCCAGGCCTCTCCTGAACCATGGAGGACTCCCTCTCTGGAACAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAAATATACTTTACAAGCAGAAGAGGAACTaGAGCCATGTGGTGATACCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLQTNLAGTSGIRNILYKQKRN*SHVVIP Trigger: CGGTATCACCACATGGCTCCAGTTCCTCTTCTGCTT...GTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | CTCCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGCGCCAAGTCCGAACTTaGTTGGGTCTCCGAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LPVARLAFQAAPRNIGALRQVRT*LGLRRS Trigger: TGATCTTCGGAGACCCAACCAAGTTCGGACTTGGCG...CAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTAAAGAGAGAGAGATGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCCAACTGGTCGTACCCTaGTTTCTTTCTGTACAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLKEREMVYQDAGGLGASQLVVP*FLSVQV Trigger: TACTTGTACAGAAAGAAACCAGGGTACGACCAGTTG...GGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTACTCATACTTCTCTATaGACATCAAGAGAAAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGTHTSL*TSREKG Trigger: CCCTTTTTCTCTTGATGTTCATAGAGAAGTATGAGT...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAAATATACTTTACCAATGCTCCAGCCCTTaGTGCTTTTGTAGTAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLQTNLAGTSGIRNILYQCSSP*CFCSRS Trigger: ACTTCTACTACAAAAGCACCAAGGGCTGGAGCATTG...GTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | GGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGAAATATACTTTACCAGGTCTGGTTGGAATaGTTTCCATGCAGAAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GPLQTNLAGTSGIRNILYQVWLE*FPCRKT Trigger: TGTTTTTCTGCATGGAAATCATTCCAACCAGACCTG...GTAAAGTATATTTCTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR TCA 90 bp | AGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTCAGGTCTGGTTGGAATaGTTTCCATGCAGAAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSSCSQKYWCFGARSSAQVWLE*FPCRKT Trigger: TGTTTTTCTGCATGGAAATCATTCCAACCAGACCTG...AGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS GCA 90 bp | GAGGGCCATGACACACGCTGGTTGCCTCGCTCATACAGGCAGCACTaGAGGATGACAATCAGGGTGAGGGCGACAGCATGCAAGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGHDTRWLPRSYRQH*RMTIRVRATACKLK Trigger: CTTCAGCTTGCATGCTGTCGCCCTCACCCTGATTGTCATCCTGCAGTGCTGCCTGTATGAGCGAGGCAACCAGCGTGTGTCATGGCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAAGTCCGAACTTGGTaGGGTCTCCGAAGATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: EGSRYGSTSDQSGRHLRDQVRTW*GLRRSM Trigger: CATTGATCTTCGGAGACCCAACCAAGTTCGGACTTG...ATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCAGGTACGGGTCCACTTCAGACCAATCTGGCAGGCACCTCAGGGATCAGCCAGTTCTGGATCACTaGTGGGTAAAAGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSRYGSTSDQSGRHLRDQPVLDH*WVKGDR Trigger: TCTGTCTCCTTTTACCCACAAGTGATCCAGAACTGG...CTGATCCCTGAGGTGCCTGCCAGATTGGTCTGAAGTGGACCCGTACCTGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGGCCTTTGCTGGATACAACCTTTCCTACCAGGGCCCAGGCCCTGGCTGACACCATTGGGGTATTaGAGGAGAAACTCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSGLCWIQPFLPGPRPWLTPLGY*RRNSSW Trigger: CCAGGAGGAGTTTCTCCTCAAATACCCCAATGGTGT...CAGCCAGGGCCTGGGCCCTGGTAGGAAAGGTTGTATCCAGCAAAGGCCAGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | CACCAGCATCAGCACCTTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTACGGGGTTCACACCATaGGGGTATTTGAGGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HQHQHLQVHGPQHLAAWSTGFTP*GYLRRN Trigger: GTTTCTCCTCAAATACCCCAATGGTGTGAACCCCGT...AGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAAGGTGCTGATGCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS GCA 90 bp | TACAGGCAGCACTGCAGGATGACAATCAGGGTGAGGGCGACAGCATaGAAGCTGAAGAAGGCATCATTACTGTCGACGGGGTTCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: YRQHCRMTIRVRATA*KLKKASLLSTGFTP Trigger: TGGTGTGAACCCCGTCGACAGTAATGATGCCTTCTTCAGCTTGCATGCTGTCGCCCTCACCCTGATTGTCATCCTGCAGTGCTGCCTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTTAAAGAGAGAGAGATGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCACGCCAAGTCCGAACTaGGTTGGGTCTCCGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SLKEREMVYQDAGGLGASTPSPN*VGSPKI Trigger: GATCTTCGGAGACCCAACCAAGTTCGGACTTGGCGT...GGAGGCACCCAGCCCTCCTGCGTCTTGATATACCATCTCTCTCTCTTTAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTCAAGTCCGAACTTGGTaGGGTCTCCGAAGATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGQVRTW*GLRRSM Trigger: CATTGATCTTCGGAGACCCAACCAAGTTCGGACTTG...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS TCA 90 bp | GGAGAAACTCCTCCTGGATATAGGGCACCCACAAAAGACCGATGTTaGAAACACTGTAGGCCACGAAGCCCGTCAAGTTCAGGGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: GETPPGYRAPTKDRC*KHCRPRSPSSSGPR Trigger: TCTTGGCCCTGAACTTGACGGGCTTCGTGGCCTACAGTGTTTTCAACATCGGTCTTTTGTGGGTGCCCTATATCCAGGAGGAGTTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAACGGGGTTCACACCATaGGGGTATTTGAGGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKTGFTP*GYLRRN Trigger: GTTTCTCCTCAAATACCCCAATGGTGTGAACCCCGT...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | TGGTATATCAAGACGCAGGAGGGCTGGGTGCCTCCAGCAGAGGGCTGGAGCTTTGAAGATCAATGTCCATaGGTCATTATTGTAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: WYIKTQEGWVPPAEGWSFEDQCP*VIIVRL Trigger: CAGTCTTACAATAATGACCAATGGACATTGATCTTC...AAAGCTCCAGCCCTCTGCTGGAGGCACCCAGCCCTCCTGCGTCTTGATATACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGACGCCAAGTCCGAACTaGGTTGGGTCTCCGAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LPVARLAFQAAPRNIGALTPSPN*VGSPKI Trigger: GATCTTCGGAGACCCAACCAAGTTCGGACTTGGCGT...CAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGTTCCAGAGAGGGAGTCCTCCATGGTTCAGGAGAGGCCTGGATGAAGACAATTTTGAGAAGTCACTaGGAAAGAGGCATTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCSREGVLHGSGEAWMKTILRSH*ERGIFL Trigger: GAGAAAAATGCCTCTTTCCAAGTGACTTCTCAAAAT...TGTCTTCATCCAGGCCTCTCCTGAACCATGGAGGACTCCCTCTCTGGAACAGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAGTCCATGGGCCACAGCACCTGGCTGCTTGGTCTCTGTGAACACTGTGGTCACTTGTCCAATATTTaGAGAAGTCACTTGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FKSMGHSTWLLGLCEHCGHLSNI*RSHLER Trigger: TCTTTCCAAGTGACTTCTCAAAATATTGGACAAGTG...ACCACAGTGTTCACAGAGACCAAGCAGCCAGGTGCTGTGGCCCATGGACTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCAGTTGCAAGGTTAGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGACACCATTGGGGTATTaGAGGAGAAACTCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: LPVARLAFQAAPRNIGALTPLGY*RRNSSW Trigger: CCAGGAGGAGTTTCTCCTCAAATACCCCAATGGTGT...CAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCTAACCTTGCAACTGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS-3UTR CAA 90 bp | TTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAAGTGGGAAGATCAATGTCCATaGGTCATTATTGTAAGACTG | + |
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Preference number: 5 (lower is better) Translates to: LRGVWGLKMVLHPTLRKWEDQCP*VIIVRL Trigger: CAGTCTTACAATAATGACCAATGGACATTGATCTTC...CCACTTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS-3UTR CAA 90 bp | AAGGTTACGGGGAGTCTGGGGACTCAAGATGGTGCTCCATCCGACTCTCAGAAACACTTGTCCAATATTTaGAGAAGTCACTTGGAAAGA | + |
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Preference number: 5 (lower is better) Translates to: KVTGSLGTQDGAPSDSQKHLSNI*RSHLER Trigger: TCTTTCCAAGTGACTTCTCAAAATATTGGACAAGTG...TTTCTGAGAGTCGGATGGAGCACCATCTTGAGTCCCCAGACTCCCCGTAACCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS CCA 90 bp | TTCTGCTGTGTATCACCAAGAACCGGATCCTGGGGCAGGTCTGGTTaGAATGATTTCCATGCAGAAAAACAGTCACTTGTCCAATATTTT | + |
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Preference number: 5 (lower is better) Translates to: FCCVSPRTGSWGRSG*NDFHAEKQSLVQYF Trigger: AAAATATTGGACAAGTGACTGTTTTTCTGCATGGAAATCATTCCAACCAGACCTGCCCCAGGATCCGGTTCTTGGTGATACACAGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS CCA 90 bp | GACAACATCAAAGAAGATGGTGAAGACGCCAAGTCCGAACTTGGTTaGGTCTCCGAAGATCAATGTCCATTGGTCATTATTGTAAGACTG | + |
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Preference number: 5 (lower is better) Translates to: DNIKEDGEDAKSELG*VSEDQCPLVIIVRL Trigger: CAGTCTTACAATAATGACCAATGGACATTGATCTTCGGAGACCCAACCAAGTTCGGACTTGGCGTCTTCACCATCTTCTTTGATGTTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS-3UTR CAA 90 bp | AGCTTTTCAAGCTGCTCCCAGAAATATTGGTGCTTTGGGGCAAGGTCATCAGCTATTTTGAGAAGTCACTaGGAAAGAGGCATTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: SFSSCSQKYWCFGARSSAILRSH*ERGIFL Trigger: GAGAAAAATGCCTCTTTCCAAGTGACTTCTCAAAAT...AGCTGATGACCTTGCCCCAAAGCACCAATATTTCTGGGAGCAGCTTGAAAAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS TCA 72 bp | GAGCCATGCGAGTACCAGGAAGCCAATGGAGGGCCATaGCACACGCTGGTTGCCTCGCTCATACAGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: EPCEYQEANGGP*HTLVASLIQAA Trigger: TGCTGCCTGTATGAGCGAGGCAACCAGCGTGTGTCATGGCCCTCCATTGGCTTCCTGGTACTCGCATGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS GCA 72 bp | GACACACGCTGGTTGCCTCGCTCATACAGGCAGCACTaGAGGATGACAATCAGGGTGAGGGCGACAGCATGC | + |
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Preference number: 6 (lower is better) Translates to: DTRWLPRSYRQH*RMTIRVRATAC Trigger: GCATGCTGTCGCCCTCACCCTGATTGTCATCCTGCAGTGCTGCCTGTATGAGCGAGGCAACCAGCGTGTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS CCA 72 bp | AGTACCAGGAAGCCAATGGAGGGCCATGACACACGCTaGTTGCCTCGCTCATACAGGCAGCACTGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: STRKPMEGHDTR*LPRSYRQHCRM Trigger: CATCCTGCAGTGCTGCCTGTATGAGCGAGGCAACCAGCGTGTGTCATGGCCCTCCATTGGCTTCCTGGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS CCA 72 bp | CTAGGACAAAGAGCCATGCGAGTACCAGGAAGCCAATaGAGGGCCATGACACACGCTGGTTGCCTCGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LGQRAMRVPGSQ*RAMTHAGCLAH Trigger: ATGAGCGAGGCAACCAGCGTGTGTCATGGCCCTCCATTGGCTTCCTGGTACTCGCATGGCTCTTTGTCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS GCA 72 bp | CACTGCAGGATGACAATCAGGGTGAGGGCGACAGCATaGAAGCTGAAGAAGGCATCATTACTGTCGACGGGG | + |
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Preference number: 6 (lower is better) Translates to: HCRMTIRVRATA*KLKKASLLSTG Trigger: CCCCGTCGACAGTAATGATGCCTTCTTCAGCTTGCATGCTGTCGCCCTCACCCTGATTGTCATCCTGCAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS TCA 72 bp | CCTCCTGGATATAGGGCACCCACAAAAGACCGATGTTaGAAACACTGTAGGCCACGAAGCCCGTCAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PPGYRAPTKDRC*KHCRPRSPSSS Trigger: TGAACTTGACGGGCTTCGTGGCCTACAGTGTTTTCAACATCGGTCTTTTGTGGGTGCCCTATATCCAGGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS TCA 72 bp | CATTACTGTCGACGGGGTTCACACCATTGGGGTATTTaGGGAGAAACTCCTCCTGGATATAGGGCACCCACA | + |
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Preference number: 6 (lower is better) Translates to: HYCRRGSHHWGI*GETPPGYRAPT Trigger: TGTGGGTGCCCTATATCCAGGAGGAGTTTCTCCTCAAATACCCCAATGGTGTGAACCCCGTCGACAGTAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS TCA 72 bp | ACCAAGAACCGGATCCTGGGGCAGGTCTGGTTGGAATaGTTTCCATGCAGAAAAACAGTCACTTGTCCAATA | + |
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Preference number: 6 (lower is better) Translates to: TKNRILGQVWLE*FPCRKTVTCPI Trigger: TATTGGACAAGTGACTGTTTTTCTGCATGGAAATCATTCCAACCAGACCTGCCCCAGGATCCGGTTCTTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS CAA 72 bp | ACATCAAAGAAGATGGTGAAGACGCCAAGTCCGAACTaGGTTGGGTCTCCGAAGATCAATGTCCATTGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TSKKMVKTPSPN*VGSPKINVHWS Trigger: TGACCAATGGACATTGATCTTCGGAGACCCAACCAAGTTCGGACTTGGCGTCTTCACCATCTTCTTTGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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| CDS CCA 72 bp | AAAGAAGATGGTGAAGACGCCAAGTCCGAACTTGGTTaGGTCTCCGAAGATCAATGTCCATTGGTCATTATT | + |
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Preference number: 6 (lower is better) Translates to: KEDGEDAKSELG*VSEDQCPLVII Trigger: AATAATGACCAATGGACATTGATCTTCGGAGACCCAACCAAGTTCGGACTTGGCGTCTTCACCATCTTCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006103.9 ENSMUST00000108476.8 |
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