Pregenerated sensors for CTNNBL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027649Ensembl transcript IDs: ENSMUST00000029178.7
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGTGCTGCCCACACCAGGTGTCTCCTGTCACCACTGGCTTCTCTaGCCTTCCCCAGGTGTGCCTGTGCTCACTGGGGAGGAGCGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: RVLPTPGVSCHHWLL*PSPGVPVLTGEERD Trigger: GTCCCGCTCCTCCCCAGTGAGCACAGGCACACCTGGGGAAGGCCAGAGAAGCCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CCA 90 bp | GTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTCACCACTaGCTTCTCTGGCCTTCCCCAGGTGTGCCTGTGCTCACTGGGGAG | + |
|
Preference number: 1 (lower is better) Translates to: VHKRVLPTPGVSCHH*LLWPSPGVPVLTGE Trigger: CTCCCCAGTGAGCACAGGCACACCTGGGGAAGGCCAGAGAAGCCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR TCA 90 bp | CCACAGCTCTGGGTGGTGTCTGCAGACTCGCCTACTCCAGGCATTTaGAGACAGAAGCACAGGGCTGTGGGTGGGGGTGGGGGTGTAGTG | + |
|
Preference number: 1 (lower is better) Translates to: PQLWVVSADSPTPGI*RQKHRAVGGGGGVV Trigger: CACTACACCCCCACCCCCACCCACAGCCCTGTGCTTCTGTCTTCAAATGCCTGGAGTAGGCGAGTCTGCAGACACCACCCAGAGCTGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 90 bp | TCCCTGGCTCCTGAGCTCCCAGCAGCCACAGCTCTGGGTGGTGTCTaGAGACTCGCCTACTCCAGGCATTTGAAGACAGAAGCACAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: SLAPELPAATALGGV*RLAYSRHLKTEAQG Trigger: GCCCTGTGCTTCTGTCTTCAAATGCCTGGAGTAGGCGAGTCTGCAGACACCACCCAGAGCTGTGGCTGCTGGGAGCTCAGGAGCCAGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CCA 90 bp | TACTCCAGGCATTTGAAGACAGAAGCACAGGGCTGTGGGTGGGGGTaGGGGTGTAGTGATGTGCTGGGACTGCAGTGGCAGGTAATCCCC | + |
|
Preference number: 1 (lower is better) Translates to: YSRHLKTEAQGCGWG*GCSDVLGLQWQVIP Trigger: GGGGATTACCTGCCACTGCAGTCCCAGCACATCACTACACCCCCACCCCCACCCACAGCCCTGTGCTTCTGTCTTCAAATGCCTGGAGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCAGTGGCAGGTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGTTCAGACGGAGCGGGACAGGGCTaGCGGGAAGCTTACACATAC | + |
|
Preference number: 2 (lower is better) Translates to: TAVAGNPLCPAVPEPCSDGAGQG*REAYTY Trigger: GTATGTGTAAGCTTCCCGCCAGCCCTGTCCCGCTCC...GTCTGAACAGGGCTCTGGGACTGCCGGGCACAGGGGATTACCTGCCACTGCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CAA 90 bp | GCCACAGCTCTGGGTGGTGTCTGCAGACTCGCCTACTCCAGGCATTaGAAGACAGAAGCACAGGGCTGTGGGTGGGGGTGGGGGTGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ATALGGVCRLAYSRH*KTEAQGCGWGWGCS Trigger: ACTACACCCCCACCCCCACCCACAGCCCTGTGCTTCTGTCTTCAAATGCCTGGAGTAGGCGAGTCTGCAGACACCACCCAGAGCTGTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR CCA 90 bp | CCACCACCCTGTGAGAAAACCATGCCCCTCTGTTCCTGGCTGCATTCCCTGGCTCACCACTGGCTTCTCTaGCCTTCCCCAGGTGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: PPPCEKTMPLCSWLHSLAHHWLL*PSPGVP Trigger: AGGCACACCTGGGGAAGGCCAGAGAAGCCAGTGGTG...AGCCAGGGAATGCAGCCAGGAACAGAGGGGCATGGTTTTCTCACAGGGTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR TCA 90 bp | CTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCGTTTCCACCACCGCATTCCCTGGCTCCTaGGCTCCCAGCAGCCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: LTMKCAHIHDQPQSVSTTAFPGS*APSSHS Trigger: GCTGTGGCTGCTGGGAGCTCAGGAGCCAGGGAATGC...GGTGGTGGAAACGCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR CCA 90 bp | CGTGGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGGGCTGTGGGTGGGGGTaGGGGTGTAGTGATGTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: RGISVLTMKCAHIHDQPQGCGWG*GCSDVL Trigger: CAGCACATCACTACACCCCCACCCCCACCCACAGCC...CTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR GCA 90 bp | CGTGGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGGGGGGTGTAGTGATGTaGTGGGACTGCAGTGGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: RGISVLTMKCAHIHDQPQGGVVM*WDCSGR Trigger: CCTGCCACTGCAGTCCCAGCACATCACTACACCCCC...CTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACCACG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR CCA 90 bp | CGACGGCTTAGCAGCCCCCTTCCCTCAACAGCTTTATTAGAAACCACATCATTTCCTGGCTGCATTCCCTaGCTCCTGAGCTCCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RRLSSPLPSTALLETTSFPGCIP*LLSSQQ Trigger: CTGCTGGGAGCTCAGGAGCCAGGGAATGCAGCCAGG...AAATGATGTGGTTTCTAATAAAGCTGTTGAGGGAAGGGGGCTGCTAAGCCGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR-3UTR GCA 90 bp | GGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCCCTGTGAGAAAACCATaGCCCTCTGTTCCTGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: GISVLTMKCAHIHDQPQSPVRKP*PSVPGC Trigger: GCAGCCAGGAACAGAGGGGCATGGTTTTCTCACAGG...GCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CAA 90 bp | AGCCCCCTTCCCTCAACAGCTTTATTAGAAACCACATCATTTGATTaGTCCTCTGAGAATGTACAACTCCGTGGTATCAGCGTGCTCACA | + |
|
Preference number: 2 (lower is better) Translates to: SPLPSTALLETTSFD*SSENVQLRGISVLT Trigger: TGTGAGCACGCTGATACCACGGAGTTGTACATTCTCAGAGGACAAATCAAATGATGTGGTTTCTAATAAAGCTGTTGAGGGAAGGGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | ACCACTGGCTTCTCTGGCCTTCCCCAGGTGTGCCTGTaGTCACTGGGGAGGAGCGGGACAGGGCTGGCGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TTGFSGLPQVCL*SLGRSGTGLAG Trigger: TCCCGCCAGCCCTGTCCCGCTCCTCCCCAGTGAGCACAGGCACACCTGGGGAAGGCCAGAGAAGCCAGTGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CCA 72 bp | GCTTCTCTGGCCTTCCCCAGGTGTGCCTGTGCTCACTaGGGAGGAGCGGGACAGGGCTGGCGGGAAGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: ASLAFPRCACAH*GGAGQGWREAY Trigger: GTAAGCTTCCCGCCAGCCCTGTCCCGCTCCTCCCCAGTGAGCACAGGCACACCTGGGGAAGGCCAGAGAAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | CCCCTGTGCCCGGCAGTCCCAGAGCCCTGTTCAGACTaGTGTGCACAAACGGGTGCTGCCCACACCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PLCPAVPEPCSD*CAQTGAAHTRC Trigger: ACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGTCTGAACAGGGCTCTGGGACTGCCGGGCACAGGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | GTGCCCGGCAGTCCCAGAGCCCTGTTCAGACTGCTGTaGACAAACGGGTGCTGCCCACACCAGGTGTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: VPGSPRALFRLL*TNGCCPHQVSP Trigger: AGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGTCTGAACAGGGCTCTGGGACTGCCGGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CCA 72 bp | CCCACACCAGGTGTCTCCTGTCACCACTGGCTTCTCTaGCCTTCCCCAGGTGTGCCTGTGCTCACTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTPGVSCHHWLL*PSPGVPVLTGE Trigger: CTCCCCAGTGAGCACAGGCACACCTGGGGAAGGCCAGAGAAGCCAGTGGTGACAGGAGACACCTGGTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | CCCAGAGCCCTGTTCAGACTGCTGTGCACAAACGGGTaGTGCCCACACCAGGTGTCTCCTGTCACCACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: PRALFRLLCTNG*CPHQVSPVTTG Trigger: GCCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGTCTGAACAGGGCTCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | CACCCTGTGAGAAAACCATGCCCCTCTGTTCCTGGCTaGATTCCCTGGCTCCTGAGCTCCCAGCAGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: HPVRKPCPSVPG*IPWLLSSQQPQ Trigger: CTGTGGCTGCTGGGAGCTCAGGAGCCAGGGAATGCAGCCAGGAACAGAGGGGCATGGTTTTCTCACAGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR CCA 72 bp | AGAAAACCATGCCCCTCTGTTCCTGGCTGCATTCCCTaGCTCCTGAGCTCCCAGCAGCCACAGCTCTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: RKPCPSVPGCIP*LLSSQQPQLWV Trigger: CACCCAGAGCTGTGGCTGCTGGGAGCTCAGGAGCCAGGGAATGCAGCCAGGAACAGAGGGGCATGGTTTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | CCTGAGCTCCCAGCAGCCACAGCTCTGGGTGGTGTCTaGAGACTCGCCTACTCCAGGCATTTGAAGACAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PELPAATALGGV*RLAYSRHLKTE Trigger: TTCTGTCTTCAAATGCCTGGAGTAGGCGAGTCTGCAGACACCACCCAGAGCTGTGGCTGCTGGGAGCTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR GCA 72 bp | ACCACAGAGCGTTTCCACCACCCTGTGAGAAAACCATaGCCCTCTGTTCCTGGCTGCATTCCCTGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTERFHHPVRKP*PSVPGCIPWLL Trigger: CAGGAGCCAGGGAATGCAGCCAGGAACAGAGGGGCATGGTTTTCTCACAGGGTGGTGGAAACGCTCTGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| 3UTR TCA 72 bp | AGAATGTACAACTCCGTGGTATCAGCGTGCTCACAATaGAGTGTGCTCACATCCATGACCAACCACAGAGCG | + |
|
Preference number: 3 (lower is better) Translates to: RMYNSVVSACSQ*SVLTSMTNHRA Trigger: CGCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACCACGGAGTTGTACATTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGACTGCAGTGGCAGGTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGCTGGGCAGCCTCTGTaGACATCTCCGGACGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQWQVIPCARQSQSPAGQPL*TSPDGT Trigger: AGTTCCGTCCGGAGATGTGCACAGAGGCTGCCCAGC...AGGGCTCTGGGACTGCCGGGCACAGGGGATTACCTGCCACTGCAGTCCCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCTGGCCTTCCCCAGGTGTGCCTGTGCTCACTGGGGAGGAGCGGGACAGATGTTCAGGATCTGGTaGACCCGCTGGCGAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLAFPRCACAHWGGAGQMFRIW*TRWRIW Trigger: CCAGATTCGCCAGCGGGTTCACCAGATCCTGAACAT...CTGTCCCGCTCCTCCCCAGTGAGCACAGGCACACCTGGGGAAGGCCAGAGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | CTGTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTCACCACTGGCTTCCACTGCAGGAGTCCCTaGTGGGCAGCCTCTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCTNGCCPHQVSPVTTGFHCRSP*WAASVH Trigger: GTGCACAGAGGCTGCCCAGCAGGGACTCCTGCAGTG...GAAGCCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGTTCAGACTGCTGTGCACAAACCCGGGGTCGTTTTGTaGCCCTGTTGGGCTGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIPCARQSQSPVQTAVHKPGVVL*PCWAGS Trigger: GCTACCAGCCCAACAGGGGCACAAAACGACCCCGGG...TTTGTGCACAGCAGTCTGAACAGGGCTCTGGGACTGCCGGGCACAGGGGATTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | CCCTGTTCAGACTGCTGTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTGCAGGAGTCCCTGCTaGGCAGCCTCTGTGCACATC | + |
|
Preference number: 4 (lower is better) Translates to: PCSDCCAQTGAAHTRCLLCRSPC*AASVHI Trigger: GATGTGCACAGAGGCTGCCCAGCAGGGACTCCTGCA...CAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGTCTGAACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | ACTGCTGTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTCACCACTGGGGTACAGGTCAGGCATaGTGGCCACCACGTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TAVHKRVLPTPGVSCHHWGTGQA*WPPRAS Trigger: AGATGCACGTGGTGGCCACCATGCCTGACCTGTACC...CCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGTTCAGACTGCTGTGCACAAAAGGCGCTCCAGATTCTaGACCAACAATGCGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VIPCARQSQSPVQTAVHKRRSRF*TNNAAT Trigger: GGTGGCCGCATTGTTGGTGCAGAATCTGGAGCGCCT...TTTGTGCACAGCAGTCTGAACAGGGCTCTGGGACTGCCGGGCACAGGGGATTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCAGCCGGGTCCGCTGCTaGCCTCTCAGGTTGCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GISVLTMKCAHIHDQPQSSRVRC*PLRLRR Trigger: CCTGCGCAACCTGAGAGGGCAGCAGCGGACCCGGCT...GCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | CTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCGTTTCCACCACCAACAATGCGGCCACCTaGCCGTCCACCAGGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LTMKCAHIHDQPQSVSTTNNAAT*PSTRAS Trigger: CGACGCCCTGGTGGACGGGCAGGTGGCCGCATTGTT...GGTGGTGGAAACGCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | CCCTGTTCAGACTGCTGTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTGTGGCAGTTGTCTGTaGCTTCAGGCCCAATCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PCSDCCAQTGAAHTRCLLCGSCL*LQAQSW Trigger: CCATGATTGGGCCTGAAGGCACAGACAACTGCCACA...CAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGTCTGAACAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGACTGCAGTGGCAGGTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGTCGGCCACCTGCATTaGGCTGAGATATTTAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VLGLQWQVIPCARQSQSPVGHLH*AEIFKM Trigger: CATTTTAAATATCTCAGCGCAATGCAGGTGGCCGAC...AGGGCTCTGGGACTGCCGGGCACAGGGGATTACCTGCCACTGCAGTCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GGGACAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAACCAACAAGGCCAGGATaGGCTTCTGCTCGGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GTGLAGSLHIQCQPQDTKPTRPG*ASARSP Trigger: GGGAGACCGAGCAGAAGCGCATCCTGGCCTTGTTGG...TTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | ACTGCTGTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTCACCACTGGCAGACATGCTCTTCATaGTCCTTCTCTGTGGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TAVHKRVLPTPGVSCHHWQTCSS*SFSVVP Trigger: GGGAACCACAGAGAAGGAGCATGAAGAGCATGTCTG...CCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | GGGACAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAAACAGGTCAGGCATGGTaGCCACCACGTGCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTGLAGSLHIQCQPQDTKTGQAW*PPRASP Trigger: AGGAGATGCACGTGGTGGCCACCATGCCTGACCTGT...TTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | GTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGTTCAGACTGCTGTGCACAAACTTCAGGCCCAATCATaGCATGGTCCAGCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIPCARQSQSPVQTAVHKLQAQS*HGPAPS Trigger: TGAAGGTGCTGGACCATGCCATGATTGGGCCTGAAG...TTTGTGCACAGCAGTCTGAACAGGGCTCTGGGACTGCCGGGCACAGGGGATTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | GGGACAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAACCACCAGGGCGTCGATaGGAACTTCTGCTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGLAGSLHIQCQPQDTKPPGRR*ELLLLL Trigger: AAGAAGGAGCAGAAGTTCTCATCGACGCCCTGGTGG...TTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | TACAACTGTAAAAATGGTTTCCAGGAGGGAGCCAGGGGTCGGTGGCCGTCACGCTGTCCTGGAGGAGGATaGCCAGCACTTCACTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: YNCKNGFQEGARGRWPSRCPGGG*PALHYS Trigger: ACTGTAGTGAAGTGCTGGCCATCCTCCTCCAGGACA...GCGTGACGGCCACCGACCCCTGGCTCCCTCCTGGAAACCATTTTTACAGTTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | GAAGGTCGACGGCTTAGCAGCCCCCTTCCCTCAACAGCTTTATTAGAAACCACAGGCCCAATCATGGCATaGTCCAGCACCTTCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EGRRLSSPLPSTALLETTGPIMA*SSTFRA Trigger: CGCCCTGAAGGTGCTGGACCATGCCATGATTGGGCC...TGTGGTTTCTAATAAAGCTGTTGAGGGAAGGGGGCTGCTAAGCCGTCGACCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | GAGAAAACCATGCCCCTCTGTTCCTGGCTGCATTCCCTGGCTCCTGAGCTCCCATGGTTCCCACCTTCTTaGTTTTCCGAGGAGACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: EKTMPLCSWLHSLAPELPWFPPS*FSEETS Trigger: TGAAGTCTCCTCGGAAAATCAAGAAGGTGGGAACCA...TGGGAGCTCAGGAGCCAGGGAATGCAGCCAGGAACAGAGGGGCATGGTTTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | CAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAAACTAAAGCCGAGAAGTGACTaGACGGCACTCAGCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: QGWREAYTYNVSPRIPKLKPRSD*TALSST Trigger: CGTGGAGCTGAGTGCCGTGCAGTCACTTCTCGGCTT...TAGTTTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | GGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCACCCGCTGGCGAATCTaGGGGACATTGGCATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GISVLTMKCAHIHDQPQSTRWRI*GTLALQ Trigger: CTGCAATGCCAATGTCCCCCAGATTCGCCAGCGGGT...GCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | AGCTCTGGGTGGTGTCTGCAGACTCGCCTACTCCAGGCATTTGAAGACAGAAGCCCTTCTTCACTCTCGTaGAGGGTGTCTATGTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGWCLQTRLLQAFEDRSPSSLS*RVSMSV Trigger: GACAGACATAGACACCCTCCACGAGAGTGAAGAAGG...GCTTCTGTCTTCAAATGCCTGGAGTAGGCGAGTCTGCAGACACCACCCAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | GGGACAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAATGCAGATCTCCGCCATaGTGTAACAGATGTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTGLAGSLHIQCQPQDTKCRSPP*CNRCAV Trigger: TACAGCACATCTGTTACATCATGGCGGAGATCTGCA...TTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | CAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAAACTATCCGAGGAGACTTCATaGAGAGTGGAAAGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QGWREAYTYNVSPRIPKLSEETS*RVERWS Trigger: GGACCATCTTTCCACTCTTCATGAAGTCTCCTCGGA...TAGTTTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | CGACGGCTTAGCAGCCCCCTTCCCTCAACAGCTTTATTAGAAACCACATCATTTAGCTCCACGAGAAGGTaGTACAGGTCAGGCATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRLSSPLPSTALLETTSFSSTRR*YRSGMV Trigger: CACCATGCCTGACCTGTACCACCTTCTCGTGGAGCT...AAATGATGTGGTTTCTAATAAAGCTGTTGAGGGAAGGGGGCTGCTAAGCCGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | GTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTGTTCAGACTGCTGTGCACAAAGATCGACCACAGCTATaGACACATCTGTATTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VIPCARQSQSPVQTAVHKDRPQL*THLYYH Trigger: ATGATAATACAGATGTGTCCATAGCTGTGGTCGATC...TTTGTGCACAGCAGTCTGAACAGGGCTCTGGGACTGCCGGGCACAGGGGATTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | CAGGGCTGGCGGGAAGCTTACACATACAATGTCAGCCCCAGGATACCAAAACTACATCGAAGGGCATCTTaGCCTTCAGCCTCTTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QGWREAYTYNVSPRIPKLHRRAS*PSASST Trigger: TGTTGAAGAGGCTGAAGGCCAAGATGCCCTTCGATG...TAGTTTTGGTATCCTGGGGCTGACATTGTATGTGTAAGCTTCCCGCCAGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | CTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCGTTTCCACCACCTTTTCGTCATTGTCCTaGAGGAGGATGGCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: LTMKCAHIHDQPQSVSTTFSSLS*RRMAST Trigger: AGTGCTGGCCATCCTCCTCCAGGACAATGACGAAAA...GGTGGTGGAAACGCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCTCCCTGTCAATAATCTaGAGCAGCCTTTTCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GISVLTMKCAHIHDQPQSSLSII*SSLFLS Trigger: TGACAAGAAAAGGCTGCTGCAGATTATTGACAGGGA...GCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR GCA 90 bp | GGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCATCTCCAATGTTCTCTaGGTACTCCTTGATGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: GISVLTMKCAHIHDQPQSISNVL*VLLDDV Trigger: CACATCATCAAGGAGTACGCAGAGAACATTGGAGAT...GCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CCA 90 bp | CGTGGTATCAGCGTGCTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGATGTCAACAAACTTGTaGCAGTTGTCTGTGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGISVLTMKCAHIHDQPQMSTNL*QLSVPS Trigger: TGAAGGCACAGACAACTGCCACAAGTTTGTTGACAT...CTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAGCACGCTGATACCACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTTAATTTGTTCAAGCCATACAACTGTAAAAATGGTTTCCAGGAGGGAGCCACCACGTGCATCTCCTaGATGATGTCATTGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFNLFKPYNCKNGFQEGATTCIS*MMSLRS Trigger: GGACCTCAATGACATCATTCAGGAGATGCACGTGGT...GGCTCCCTCCTGGAAACCATTTTTACAGTTGTATGGCTTGAACAAATTAAAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTTAATTTGTTCAAGCCATACAACTGTAAAAATGGTTTCCAGGAGGGAGCCAATACGGATAACTGCTaGAGAAGCACGTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFNLFKPYNCKNGFQEGANTDNC*RSTSMP Trigger: TGGCATTGACGTGCTTCTTCAGCAGTTATCCGTATT...GGCTCCCTCCTGGAAACCATTTTTACAGTTGTATGGCTTGAACAAATTAAAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR TCA 90 bp | AGCTTTAATTTGTTCAAGCCATACAACTGTAAAAATGGTTTCCAGGAGGGAGCCATCGCTTCTCAAATGTaGGAATCATCTTCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFNLFKPYNCKNGFQEGAIASQM*ESSSSL Trigger: CAGTGAAGAAGATGATTCTCACATTTGAGAAGCGAT...GGCTCCCTCCTGGAAACCATTTTTACAGTTGTATGGCTTGAACAAATTAAAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | TGCTGTGCACAAACGGGTGCTGCCCACACCAGGTGTCTCCTGTCACCACTGGCTCATCCCGGGGTCGTTTaGTGCCCCTGTTGGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: CCAQTGAAHTRCLLSPLAHPGVV*CPCWAG Trigger: ACCAGCCCAACAGGGGCACAAAACGACCCCGGGATG...AGCCAGTGGTGACAGGAGACACCTGGTGTGGGCAGCACCCGTTTGTGCACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGACTGCAGTGGCAGGTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTTCGTCCTCCATGTCATaGTCTATGATCTCCCCACGC | + |
|
Preference number: 5 (lower is better) Translates to: VLGLQWQVIPCARQSQSPSSSMS*SMISPR Trigger: GCGTGGGGAGATCATAGACAATGACATGGAGGACGA...AGGGCTCTGGGACTGCCGGGCACAGGGGATTACCTGCCACTGCAGTCCCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 90 bp | CAATGCGGCCACCTGCCCGTCCACCAGGGCGTCGATGAGAACTTCTaGTCCTTCTTCACTCTCGTGGAGGGTGTCTATGTCTGTCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QCGHLPVHQGVDENF*SFFTLVEGVYVCQL Trigger: GAGCTGACAGACATAGACACCCTCCACGAGAGTGAAGAAGGAGCAGAAGTTCTCATCGACGCCCTGGTGGACGGGCAGGTGGCCGCATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | AGACAGAAGCACAGGGCTGTGGGTGGGGGTGGGGGTGTAGTGATGTGCTGGGACAGGAAGCGCTCTCGATaGGAGCTGAGCATTAAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQKHRAVGGGGGVVMCWDRKRSR*ELSIKQ Trigger: CTGCTTAATGCTCAGCTCCAATCGAGAGCGCTTCCT...GTCCCAGCACATCACTACACCCCCACCCCCACCCACAGCCCTGTGCTTCTGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 90 bp | AATAATCTGCAGCAGCCTTTTCTTGTCATCAGCTGTGTCTTCGGCTaGCGTGGCCTCCTCTTCGCGATAGCGGCCGCGTTCTCGAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: NNLQQPFLVISCVFG*RGLLFAIAAAFSRT Trigger: GGTCCTCGAGAACGCGGCCGCTATCGCGAAGAGGAGGCCACGGCAGCCGAAGACACAGCTGATGACAAGAAAAGGCTGCTGCAGATTATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS CCA 90 bp | ACAAACTTGTGGCAGTTGTCTGTGCCTTCAGGCCCAATCATGGCATaGTCCAGCACCTTCAGGGCGCTGCTCCGGGAGACCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TNLWQLSVPSGPIMA*SSTFRALLRETFFS Trigger: GGAGAAGAAGGTCTCCCGGAGCAGCGCCCTGAAGGTGCTGGACCATGCCATGATTGGGCCTGAAGGCACAGACAACTGCCACAAGTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | TCCAGGCATTTGAAGACAGAAGCACAGGGCTGTGGGTGGGGGTGGGGGTGTAGTGCATCGAAGGGCATCTaGGCCTTCAGCCTCTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRHLKTEAQGCGWGWGCSASKGI*AFSLFN Trigger: GTTGAAGAGGCTGAAGGCCAAGATGCCCTTCGATGC...ACTACACCCCCACCCCCACCCACAGCCCTGTGCTTCTGTCTTCAAATGCCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGACTGCAGTGGCAGGTAATCCCCTGTGCCCGGCAGTCCCAGAGCCCTAGAATGTCAACAAACTaGTGGCAGTTGTCTGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGLQWQVIPCARQSQSPRMSTN*WQLSVP Trigger: AGGCACAGACAACTGCCACAAGTTTGTTGACATTCT...AGGGCTCTGGGACTGCCGGGCACAGGGGATTACCTGCCACTGCAGTCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | AGACAGAAGCACAGGGCTGTGGGTGGGGGTGGGGGTGTAGTGATGTGCTGGGACGTGGTTCCCACCTTCTaGATTTTCCGAGGAGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: RQKHRAVGGGGGVVMCWDVVPTF*IFRGDF Trigger: GAAGTCTCCTCGGAAAATCAAGAAGGTGGGAACCAC...GTCCCAGCACATCACTACACCCCCACCCCCACCCACAGCCCTGTGCTTCTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | GAGAAAACCATGCCCCTCTGTTCCTGGCTGCATTCCCTGGCTCCTGAGCTCCCATGGGGGACATTGGCATaGCAGATCTCCGCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: EKTMPLCSWLHSLAPELPWGTLA*QISAMM Trigger: CATCATGGCGGAGATCTGCAATGCCAATGTCCCCCA...TGGGAGCTCAGGAGCCAGGGAATGCAGCCAGGAACAGAGGGGCATGGTTTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS CCA 90 bp | TGTCAACAAACTTGTGGCAGTTGTCTGTGCCTTCAGGCCCAATCATaGCATGGTCCAGCACCTTCAGGGCGCTGCTCCGGGAGACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQQTCGSCLCLQAQS*HGPAPSGRCSGRPS Trigger: AGAAGGTCTCCCGGAGCAGCGCCCTGAAGGTGCTGGACCATGCCATGATTGGGCCTGAAGGCACAGACAACTGCCACAAGTTTGTTGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 90 bp | ATGGACACATCTGTATTATCATGTCCCAGCAAGCCGAGAAGTGACTaGACGGCACTCAGCTCCACGAGAAGGTGGTACAGGTCAGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: MDTSVLSCPSKPRSD*TALSSTRRWYRSGM Trigger: CATGCCTGACCTGTACCACCTTCTCGTGGAGCTGAGTGCCGTGCAGTCACTTCTCGGCTTGCTGGGACATGATAATACAGATGTGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | CTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCGTTTCCACCACCACAATAGCTAGGGTGTaGTGGACGCCATCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LTMKCAHIHDQPQSVSTTTIARV*WTPSAS Trigger: GGAGGCTGATGGCGTCCACAACACCCTAGCTATTGT...GGTGGTGGAAACGCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | TCAAGCCATACAACTGTAAAAATGGTTTCCAGGAGGGAGCCAGGGGTCGGTGGCTGCAGCAGCCTTTTCTaGTCATCAGCTGTGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSHTTVKMVSRREPGVGGCSSLF*SSAVSS Trigger: CGAAGACACAGCTGATGACAAGAAAAGGCTGCTGCA...GCCACCGACCCCTGGCTCCCTCCTGGAAACCATTTTTACAGTTGTATGGCTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS-3UTR CAA 90 bp | CTCACAATGAAGTGTGCTCACATCCATGACCAACCACAGAGCGTTTCCACCACCACAAACTTGTGGCAGTaGTCTGTGCCTTCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LTMKCAHIHDQPQSVSTTTNLWQ*SVPSGP Trigger: TGGGCCTGAAGGCACAGACAACTGCCACAAGTTTGT...GGTGGTGGAAACGCTCTGTGGTTGGTCATGGATGTGAGCACACTTCATTGTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS CCA 72 bp | TGGCAGTTGTCTGTGCCTTCAGGCCCAATCATGGCATaGTCCAGCACCTTCAGGGCGCTGCTCCGGGAGACC | + |
|
Preference number: 6 (lower is better) Translates to: WQLSVPSGPIMA*SSTFRALLRET Trigger: GGTCTCCCGGAGCAGCGCCCTGAAGGTGCTGGACCATGCCATGATTGGGCCTGAAGGCACAGACAACTGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 72 bp | AGGCGCTCCAGATTCTGCACCAACAATGCGGCCACCTaGCCGTCCACCAGGGCGTCGATGAGAACTTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRSRFCTNNAAT*PSTRASMRTSA Trigger: AGCAGAAGTTCTCATCGACGCCCTGGTGGACGGGCAGGTGGCCGCATTGTTGGTGCAGAATCTGGAGCGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS CCA 72 bp | ACTTGTGGCAGTTGTCTGTGCCTTCAGGCCCAATCATaGCATGGTCCAGCACCTTCAGGGCGCTGCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TCGSCLCLQAQS*HGPAPSGRCSG Trigger: CCCGGAGCAGCGCCCTGAAGGTGCTGGACCATGCCATGATTGGGCCTGAAGGCACAGACAACTGCCACAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS CAA 72 bp | CTCTTCGCGATAGCGGCCGCGTTCTCGAGGACCAGTTaGCTTGCGGCGTGTCTTCAGTTCTTCTTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: LFAIAAAFSRTS*LAACLQFFFLI Trigger: GATGAGGAAGAAGAACTGAAGACACGCCGCAAGCAAACTGGTCCTCGAGAACGCGGCCGCTATCGCGAAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 72 bp | TCTGTATTATCATGTCCCAGCAAGCCGAGAAGTGACTaGACGGCACTCAGCTCCACGAGAAGGTGGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVLSCPSKPRSD*TALSSTRRWYR Trigger: CCTGTACCACCTTCTCGTGGAGCTGAGTGCCGTGCAGTCACTTCTCGGCTTGCTGGGACATGATAATACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 72 bp | CCATCTCCAATGTTCTCTGCGTACTCCTTGATGATGTaGCTGACGATCTTGATGGAGCTGCCACGCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSPMFSAYSLMM*LTILMELPRMF Trigger: GAACATGCGTGGCAGCTCCATCAAGATCGTCAGGCACATCATCAAGGAGTACGCAGAGAACATTGGAGATGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS CCA 72 bp | GTCCAGCTCGGATTCCATGAACTTCTCCGGATTGTCTaGAAACTTGATCCGCAGCTCCTGGTTTTTGTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VQLGFHELLRIV*KLDPQLLVFVG Trigger: TCCTACAAAAACCAGGAGCTGCGGATCAAGTTTCCAGACAATCCGGAGAAGTTCATGGAATCCGAGCTGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||
| CDS GCA 72 bp | TCATGTTTCTCCCCTTCAATCTTCTTGTCGGCCACCTaGATTGCGCTGAGATATTTAAAATGCAGCTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: SCFSPSIFLSAT*IALRYLKCSSI Trigger: AATGGAGCTGCATTTTAAATATCTCAGCGCAATGCAGGTGGCCGACAAGAAGATTGAAGGGGAGAAACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029178.7 |
||