Pregenerated sensors for CTNNAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038816Ensembl transcript IDs: ENSMUST00000045142.15, ENSMUST00000107612.3
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCGTTCTGATAGTCTGCAGTACAGCAGATAGCTGGGCCATCTCCTaGGCAACCTTTGCCTTGCTTCATTACACAGCTTACAAGGTACAC | + |
|
Preference number: 1 (lower is better) Translates to: LVLIVCSTADSWAIS*ATFALLHYTAYKVH Trigger: GTGTACCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGCTATCTGCTGTACTGCAGACTATCAGAACGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR TCA 90 bp | CAAAAACCATCTCCTCTTCTGAAGTTGCTCCAGGCTTCTTTGGAGTaGCTCCTGTGGTTTTTCCTTCCAGAAGTAGGGAAGGGACAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: QKPSPLLKLLQASLE*LLWFFLPEVGKGQV Trigger: CACCTGTCCCTTCCCTACTTCTGGAAGGAAAAACCACAGGAGTCACTCCAAAGAAGCCTGGAGCAACTTCAGAAGAGGAGATGGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CCA 90 bp | CCAGTGAGATACTTATTAGAAGCAGCAGTGCTAACAGGTGTGATCTaGGACCAGGCACTGACGGCCCCTTATCCTGCTTCAACAAGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: PVRYLLEAAVLTGVI*DQALTAPYPASTRN Trigger: ATTTCTTGTTGAAGCAGGATAAGGGGCCGTCAGTGCCTGGTCCCAGATCACACCTGTTAGCACTGCTGCTTCTAATAAGTATCTCACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CCA 90 bp | CCAGTTAAGAATGCCAAGGAGAATGTGCATTTGCAATTGCTTCTTTaGGATTCAGCCGCCATTAAGACAGTTGGGATATTTGGTGTGTGC | + |
|
Preference number: 1 (lower is better) Translates to: PVKNAKENVHLQLLL*DSAAIKTVGIFGVC Trigger: GCACACACCAAATATCCCAACTGTCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGGCATTCTTAACTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 90 bp | AATCCGCTTAAAAACCAGTTAAGAATGCCAAGGAGAATGTGCATTTaGAATTGCTTCTTTGGGATTCAGCCGCCATTAAGACAGTTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: NPLKNQLRMPRRMCI*NCFFGIQPPLRQLG Trigger: TCCCAACTGTCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGGCATTCTTAACTGGTTTTTAAGCGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR-3UTR CCA 90 bp | GCACTGACGGCCCCTTATCCTGCTTCAACAAGAAATGAAGAAGAGTCCACAGGCGACAGTTGGGATATTTaGTGTGTGCTGAAAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: ALTAPYPASTRNEEESTGDSWDI*CVLKNT Trigger: GGTGTTTTTCAGCACACACCAAATATCCCAACTGTC...GCCTGTGGACTCTTCTTCATTTCTTGTTGAAGCAGGATAAGGGGCCGTCAGTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR-3UTR GCA 90 bp | GCCTTGCTTCATTACACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTCAGTGTACAGGTGTCTaGGATCTAAACAGCCTCTTG | + |
|
Preference number: 2 (lower is better) Translates to: ALLHYTAYKVHRFPAESSQCTGV*DLNSLL Trigger: CAAGAGGCTGTTTAGATCGCAGACACCTGTACACTG...AGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGTGTAATGAAGCAAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR-3UTR GCA 90 bp | AACCTTTGCCTTGCTTCATTACACAGCTTACAAGGTACACAGGTTTCCAGCAGAATGTGCATTTGCAATTaGTTCTTTGGGATTCAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: NLCLASLHSLQGTQVSSRMCICN*FFGIQP Trigger: CGGCTGAATCCCAAAGAAGCAATTGCAAATGCACAT...TCTGCTGGAAACCTGTGTACCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAAACCACCATAGCAACATaGCTGTCTAATCTGAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKTTIAT*LSNLKI Trigger: GATCTTCAGATTAGACAGTCATGTTGCTATGGTGGT...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR-3UTR GCA 90 bp | CAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAAGTTAAAAAGTTAAAATGTCAGCTGTaGCACATGGTATCCCTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QQSHLPSPRKGLNPKVKKLKCQL*HMVSLR Trigger: TCTCAGGGATACCATGTGGCACAGCTGACATTTTAA...CTTTTTAACTTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CCA 72 bp | TACTTATTAGAAGCAGCAGTGCTAACAGGTGTGATCTaGGACCAGGCACTGACGGCCCCTTATCCTGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: YLLEAAVLTGVI*DQALTAPYPAS Trigger: TGAAGCAGGATAAGGGGCCGTCAGTGCCTGGTCCCAGATCACACCTGTTAGCACTGCTGCTTCTAATAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | CAGATAGCTGGGCCATCTCCTGGGCAACCTTTGCCTTaGTTCATTACACAGCTTACAAGGTACACAGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QIAGPSPGQPLP*FITQLTRYTGF Trigger: GAAACCTGTGTACCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGCTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CCA 72 bp | ATAGTCTGCAGTACAGCAGATAGCTGGGCCATCTCCTaGGCAACCTTTGCCTTGCTTCATTACACAGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: IVCSTADSWAIS*ATFALLHYTAY Trigger: GTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGCTATCTGCTGTACTGCAGACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR TCA 72 bp | TCTCCTCTTCTGAAGTTGCTCCAGGCTTCTTTGGAGTaGCTCCTGTGGTTTTTCCTTCCAGAAGTAGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SPLLKLLQASLE*LLWFFLPEVGK Trigger: CTTCCCTACTTCTGGAAGGAAAAACCACAGGAGTCACTCCAAAGAAGCCTGGAGCAACTTCAGAAGAGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | GTGAGTATGTGTGTAAGTCAAACGTGTATCCATGTCTaGTCAGGCATGGGTATACATGAGTGCCGTAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: VSMCVSQTCIHV*SGMGIHECRST Trigger: GGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGTTTGACTTACACACATACTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAATGTGCATTTGCAATaGCTTCTTTGGGATTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: TAYKVHRFPAESSSQPKKNVHLQ*LLWDSA Trigger: GGCTGAATCCCAAAGAAGCAATTGCAAATGCACATT...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR TCA 72 bp | GTGCTTACTACAGCTAACAAAAACCATCTCCTCTTCTaGAGTTGCTCCAGGCTTCTTTGGAGTGACTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: VLTTANKNHLLF*SCSRLLWSDSC Trigger: ACAGGAGTCACTCCAAAGAAGCCTGGAGCAACTTCAGAAGAGGAGATGGTTTTTGTTAGCTGTAGTAAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | GATTCCATCCATTATTCAGGGCTGCCTGGTCAGCTGTaGTTACTACAGCTAACAAAAACCATCTCCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: DSIHYSGLPGQL*LLQLTKTISSS Trigger: AGAAGAGGAGATGGTTTTTGTTAGCTGTAGTAAGCACAGCTGACCAGGCAGCCCTGAATAATGGATGGAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | CAGTTAAGAATGCCAAGGAGAATGTGCATTTGCAATTaGTTCTTTGGGATTCAGCCGCCATTAAGACAGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLRMPRRMCICN*FFGIQPPLRQL Trigger: CAACTGTCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGGCATTCTTAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | CAATTCCACATACATAAAATACAGTGTACAGGTGTCTaGGATCTAAACAGCCTCTTGGTTCCGATGTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QFHIHKIQCTGV*DLNSLLVPMFC Trigger: ACAGAACATCGGAACCAAGAGGCTGTTTAGATCGCAGACACCTGTACACTGTATTTTATGTATGTGGAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CCA 72 bp | AATGCCAAGGAGAATGTGCATTTGCAATTGCTTCTTTaGGATTCAGCCGCCATTAAGACAGTTGGGATATTT | + |
|
Preference number: 3 (lower is better) Translates to: NAKENVHLQLLL*DSAAIKTVGIF Trigger: AAATATCCCAACTGTCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | AAAAACCAGTTAAGAATGCCAAGGAGAATGTGCATTTaGAATTGCTTCTTTGGGATTCAGCCGCCATTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNQLRMPRRMCI*NCFFGIQPPLR Trigger: TCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGGCATTCTTAACTGGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR TCA 72 bp | TTGTCGTCAGAGATAATGGTATTGTTGCCACATATTTaGTGGTCTTTTACAGTTTTGTTGAGGGAGCTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSEIMVLLPHI*WSFTVLLRELL Trigger: AAGCAGCTCCCTCAACAAAACTGTAAAAGACCATCAAATATGTGGCAACAATACCATTATCTCTGACGACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR GCA 72 bp | TTTGCATTACAATTCTTTGTTGATTTTGTGCACAACTaGACATGTGAGTATGTGTGTAAGTCAAACGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: FALQFFVDFVHN*TCEYVCKSNVY Trigger: ATACACGTTTGACTTACACACATACTCACATGTGCAGTTGTGCACAAAATCAACAAAGAATTGTAATGCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR TCA 90 bp | GCACTGACGGCCCCTTATCCTGCTTCAACAAGAAATGAAGAAGAGTCCACAGGCCCACCGAGCGCGTCCTaGTCTCCAGTCCCGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ALTAPYPASTRNEEESTGPPSAS*SPVPSR Trigger: TCGACTCGGGACTGGAGATCAGGACGCGCTCGGTGG...GCCTGTGGACTCTTCTTCATTTCTTGTTGAAGCAGGATAAGGGGCCGTCAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | GTCAAACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCACCGAGCGCGTCCTaGTCTCCAGTCCCGAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VKRVSMSAQAWVYMSAVAPPSAS*SPVPSR Trigger: TCGACTCGGGACTGGAGATCAGGACGCGCTCGGTGG...TGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGTTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR TCA 90 bp | ACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATCAGCACTTTTGTCACTaGGGAGAGCAGCAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCIHVCSGMGIHECRSTHQHFCH*GEQQPG Trigger: GCCCGGCTGCTGCTCTCCTCAGTGACAAAAGTGCTG...ATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAATTCCAACTGCCAAGTTaGCCGCTTGTCCCACACGCT | + |
|
Preference number: 4 (lower is better) Translates to: TAYKVHRFPAESSSQPKKFQLPS*PLVPHA Trigger: AGCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAA...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATCGTGACCTGACCATCTaGTTCCAAATGGCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCIHVCSGMGIHECRSTHRDLTI*FQMAPF Trigger: AAACGGAGCCATTTGGAATCAGATGGTCAGGTCACG...ATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR GCA 90 bp | CATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATGTGGGGATCAACAAATCTTCCAACTaGCAAGTTGACCGCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HVCSGMGIHECRSTHVGINKSSN*QVDRLS Trigger: GGACAAGCGGTCAACTTGGCAGTTGGAAGATTTGTT...GATCCCCACATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CCA 90 bp | GCACTGACGGCCCCTTATCCTGCTTCAACAAGAAATGAAGAAGAGTCCACAGGCGAGAATAGGCCATCCTaGACATATTGCGTCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALTAPYPASTRNEEESTGENRPS*TYCVHA Trigger: GGCATGGACGCAATATGTCCAGGATGGCCTATTCTC...GCCTGTGGACTCTTCTTCATTTCTTGTTGAAGCAGGATAAGGGGCCGTCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAACAGCACTTTTGTCACTaGGGAGAGCAGCAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKQHFCH*GEQQPG Trigger: GCCCGGCTGCTGCTCTCCTCAGTGACAAAAGTGCTG...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAACACACGGAAAGGAGCTaGTGCAGCTCTGTCCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKHTERS*CSSVLA Trigger: GGCGAGGACAGAGCTGCAGCAGCTCCTTTCCGTGTG...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | GCACTGACGGCCCCTTATCCTGCTTCAACAAGAAATGAAGAAGAGTCCACAGGCTTTGCTATCTTGGCTTaGTCCTCCGAGTCAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALTAPYPASTRNEEESTGFAILA*SSESGL Trigger: CAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAA...GCCTGTGGACTCTTCTTCATTTCTTGTTGAAGCAGGATAAGGGGCCGTCAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | AAACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCTTTCCTTCCACCATGTaGACCATTTTGTCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRVSMSAQAWVYMSAVAPFPSTM*TILSVS Trigger: GGAGACCGACAAAATGGTCCACATGGTGGAAGGAAA...GGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| 3UTR CAA 72 bp | GCAGATAGCTGGGCCATCTCCTGGGCAACCTTTGCCTaGCTTCATTACACAGCTTACAAGGTACACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ADSWAISWATFA*LHYTAYKVHRF Trigger: AAACCTGTGTACCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGCTATCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CAA 72 bp | GTACAGCAGATAGCTGGGCCATCTCCTGGGCAACCTTaGCCTTGCTTCATTACACAGCTTACAAGGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: VQQIAGPSPGQP*PCFITQLTRYT Trigger: TGTGTACCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGCTATCTGCTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAATGTCGGTCTCTCCGCTaGGTCTGCAGTCAGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKCRSLR*VCSQSR Trigger: TCGTGACTGACTGCAGACTCAGCGGAGAGACCGACA...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAATGTAGGCAGAATCAGTaGAGTCCTCCACATGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAYKVHRFPAESSSQPKKCRQNQ*SPPHAP Trigger: TGGAGCATGTGGAGGACTTCACTGATTCTGCCTACA...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTGTCTGCGATCTAAACAGCCTCTTGGTTCCGATGTTCTGTCTTCTGCAGTTTCAGCAGCAGAAATaGTCTGTTGGCCAGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TGVCDLNSLLVPMFCLLQFQQQK*SVGQSP Trigger: AGGTGACTGGCCAACAGATCATTTCTGCTGCTGAAA...CTGCAGAAGACAGAACATCGGAACCAAGAGGCTGTTTAGATCGCAGACACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAACAAGACGGCCTCCAATaGGGCAGAAAGGTTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TAYKVHRFPAESSSQPKKQDGLQ*GRKVLF Trigger: AAAGAGAACCTTTCTGCCGCATTGGAGGCCGTCTTG...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCATCTCCTGGGCAACCTTTGCCTTGCTTCATTACACAGCTTACAAGGCCATCTGATTCCAAATaGCTCCGTTTAGTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: AGPSPGQPLPCFITQLTRPSDSK*LRLVTS Trigger: AGATGTGACTAAACGGAGCCATTTGGAATCAGATGG...CCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | GCTGGGCCATCTCCTGGGCAACCTTTGCCTTGCTTCATTACACAGCTTACAAGGAGTTTTGACCATCCATaGTATCTTTGTTCGTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AGPSPGQPLPCFITQLTRSFDHP*YLCSSQ Trigger: CTGCGACGAACAAAGATACCATGGATGGTCAAAACT...CCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | GGATTCCATCCATTATTCAGGGCTGCCTGGTCAGCTGTGCTTACTACAGCTAACGTCTTAGTTATTGTCTaGAGCTGGTGGCATAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GFHPLFRAAWSAVLTTANVLVIV*SWWHRG Trigger: TCCTCTATGCCACCAGCTTCAGACAATAACTAAGAC...GTTAGCTGTAGTAAGCACAGCTGACCAGGCAGCCCTGAATAATGGATGGAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAACGCTCTTTGTCTTCCTaGTTTGGGTTTGCATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: TAYKVHRFPAESSSQPKKRSLSS*FGFAST Trigger: TGTGGATGCAAACCCAAAGCAGGAAGACAAAGAGCG...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | ACAGGTGTCTGCGATCTAAACAGCCTCTTGGTTCCGATGTTCTGTCTTCTGCAGTCTCCTCTGCATGTATaGACGTTATCTCAAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TGVCDLNSLLVPMFCLLQSPLHV*TLSQGV Trigger: AACCCCTTGAGATAACGTGCATACATGCAGAGGAGA...CTGCAGAAGACAGAACATCGGAACCAAGAGGCTGTTTAGATCGCAGACACCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | ATTCAGCCGCCATTAAGACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTAGCTCGTCCAGGCTGTaGCTGATCTTCAGAACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IQPPLRQLGYLVCAEKHPSSSRL*LIFRTV Trigger: CACAGTTCTGAAGATCAGCCACAGCCTGGACGAGCT...AGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTCTTAATGGCGGCTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | GGATTCCATCCATTATTCAGGGCTGCCTGGTCAGCTGTGCTTACTACAGCTAACCTGAAATGTCTCCTCTaGATGTATGCACGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GFHPLFRAAWSAVLTTANLKCLL*MYARYL Trigger: GAGATAACGTGCATACATGCAGAGGAGACATTTCAG...GTTAGCTGTAGTAAGCACAGCTGACCAGGCAGCCCTGAATAATGGATGGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAACTTCAGCCCGAGCTTTaGTATCTTGGCTTGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKLQPEL*YLGLLL Trigger: GAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAG...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | GACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTTTCACCTGCTTGCTTaGCTTCGATGCAGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: DSWDIWCVLKNTLSTVFVFHLLA*LRCRRC Trigger: ACATCGCCTGCATCGAAGCCAAGCAAGCAGGTGAAA...AACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | GTGAGTATGTGTGTAAGTCAAACGTGTATCCATGTCTGCTCAGGCATGGGTATATTTCACCTGCTTGCTTaGCTTCGATGCAGGCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSMCVSQTCIHVCSGMGIFHLLA*LRCRRC Trigger: ACATCGCCTGCATCGAAGCCAAGCAAGCAGGTGAAA...TATACCCATGCCTGAGCAGACATGGATACACGTTTGACTTACACACATACTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAACGAGCTTTGCTATCTTaGCTTGCTCCTCCGAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKRALLS*LAPPSQ Trigger: CTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCG...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAACGTGACCTGACCATCTaGTTCCAAATGGCTCCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKRDLTI*FQMAPF Trigger: AAACGGAGCCATTTGGAATCAGATGGTCAGGTCACG...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | AACCTTTGCCTTGCTTCATTACACAGCTTACAAGGTACACAGGTTTCCAGCAGACCTGAGACATGTCTTTaGGGCTGTAAGGAGCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NLCLASLHSLQGTQVSSRPETCL*GCKEHH Trigger: ATGATGCTCCTTACAGCCTCAAAGACATGTCTCAGG...TCTGCTGGAAACCTGTGTACCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAAGCCATGTCACTCATCTaGGACTCCCAAGCTTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKAMSLI*DSQASQ Trigger: TTGTGAAGCTTGGGAGTCTCAGATGAGTGACATGGC...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | CAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTTGACTCACAGCTGGGATaGCTGAGACATGTCTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QLGYLVCAEKHPEHSVCFDSQLG*LRHVFE Trigger: CTCAAAGACATGTCTCAGGCATCCCAGCTGTGAGTC...AAAACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | TTACACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAACAAGCTGTTCTTTCTaGTCAGAGAGTTTACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSLQGTQVSSRVIFPAQTSCSF*SESLQA Trigger: TGCCTGTAAACTCTCTGAGCAGAAAGAACAGCTTGT...TTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAAATAAGTGTGGTGATCTaGGAAACCAGGGGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKISVVI*ETRGRR Trigger: TCTTCTGCCCCTGGTTTCTCAGATCACCACACTTAT...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | GCTGAAAAACACCCTGAGCACAGTGTTTGTTTTCAAATTGCACTGCTGTTAGAAAAAAATGCTGACAGATaGGCTGTCGGTCTCTCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: AEKHPEHSVCFQIALLLEKNADR*AVGLSA Trigger: AGCGGAGAGACCGACAGCTCATCTGTCAGCATTTTT...TTCTAACAGCAGTGCAATTTGAAAACAAACACTGTGCTCAGGGTGTTTTTCAGC 44% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | ACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAATTTGGAAGTGAAAGATaGTCGCACCTCTCTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TGFQQSHLPSPRKGLNPKFGSER*SHLSPR Trigger: ACGAGGAGAGAGGTGCGACCATCTTTCACTTCCAAA...TTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | TTACACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAATTGCACTATTCTTCGTaGGCTTTGGAAGTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHSLQGTQVSSRVIFPAQLHYSS*ALEVKD Trigger: ATCTTTCACTTCCAAAGCCCACGAAGAATAGTGCAA...TTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTTCTGGGAAGTTTTCAGTaGCCCCTCTCCTCTAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLGYLVCAEKHPEHSVCFLGSFQ*PLSSSK Trigger: TTTACTAGAGGAGAGGGGCCACTGAAAACTTCCCAG...AAAACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR GCA 90 bp | CAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTTAACAAATCTTCCAACTaGCAAGTTGACCGCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QLGYLVCAEKHPEHSVCFNKSSN*QVDRLS Trigger: GGACAAGCGGTCAACTTGGCAGTTGGAAGATTTGTT...AAAACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | GTGAGTATGTGTGTAAGTCAAACGTGTATCCATGTCTGCTCAGGCATGGGTATACCATCTGATTCCAAATaGCTCCGTTTAGTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSMCVSQTCIHVCSGMGIPSDSK*LRLVTS Trigger: AGATGTGACTAAACGGAGCCATTTGGAATCAGATGG...TATACCCATGCCTGAGCAGACATGGATACACGTTTGACTTACACACATACTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CCA 90 bp | GACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTCTCTAGCCTTTCCATaGTTGCGAGAATCTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: DSWDIWCVLKNTLSTVFVSLAFP*LRESCF Trigger: GAAACAAGATTCTCGCAACCATGGAAAGGCTAGAGA...AACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CAA 72 bp | CCAGTTAAGAATGCCAAGGAGAATGTGCATTTGCAATaGCTTCTTTGGGATTCAGCCGCCATTAAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVKNAKENVHLQ*LLWDSAAIKTV Trigger: AACTGTCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGGCATTCTTAACTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR TCA 90 bp | TTTGTTGATTTTGTGCACAACTGCACATGTGAGTATGTGTGTAAGTCAAACGTGATAAGTGTGGTGATCTaGGAAACCAGGGGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVDFVHNCTCEYVCKSNVISVVI*ETRGRR Trigger: TCTTCTGCCCCTGGTTTCTCAGATCACCACACTTAT...CACGTTTGACTTACACACATACTCACATGTGCAGTTGTGCACAAAATCAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CCA 90 bp | CAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAAGTTAAAAAGCAAAGTGAGAGGAGCTaGACCACAAGAGTCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: QQSHLPSPRKGLNPKVKKQSERS*TTRVIM Trigger: CATGATGACTCTTGTGGTCCAGCTCCTCTCACTTTG...CTTTTTAACTTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CCA 90 bp | CAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTTCAGAAAGGTTCTCTTTaGACTCAAAGCAAACATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QLGYLVCAEKHPEHSVCFQKGSL*TQSKHS Trigger: AGAATGTTTGCTTTGAGTCCAAAGAGAACCTTTCTG...AAAACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| 3UTR CAA 72 bp | TTTGTCGTCAGAGATAATGGTATTGTTGCCACATATTaGATGGTCTTTTACAGTTTTGTTGAGGGAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FVVRDNGIVATY*MVFYSFVEGAA Trigger: AGCAGCTCCCTCAACAAAACTGTAAAAGACCATCAAATATGTGGCAACAATACCATTATCTCTGACGACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 90 bp | ATCTCCAGTCCCGAGTCGAAGGTGAAGCCAGCCGCGTTGGAGGAGTaGACAGCTCCCGCACCGCCACCGCCCGGGACTGGAGAAGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ISSPESKVKPAALEE*TAPAPPPPGTGEAA Trigger: GGCCGCTTCTCCAGTCCCGGGCGGTGGCGGTGCGGGAGCTGTCCACTCCTCCAACGCGGCTGGCTTCACCTTCGACTCGGGACTGGAGAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS TCA 90 bp | CTGCTTGATGACTACACGATCTGCCAGCAGCAGCACTTTTGTCACTaGGGAGAGCAGCAGCCGGGCGGCCTGCACGACGCCTGTTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LLDDYTICQQQHFCH*GEQQPGGLHDACFV Trigger: GACAAAACAGGCGTCGTGCAGGCCGCCCGGCTGCTGCTCTCCTCAGTGACAAAAGTGCTGCTGCTGGCAGATCGTGTAGTCATCAAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CCA 90 bp | TGCATGGCTGTACAATGGAGTTCTCTCCTCAGCTCGTCCAGGCTGTaGCTGATCTTCAGAACTGTGAGTTCCAGCTCCTCGGCGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CMAVQWSSLLSSSRL*LIFRTVSSSSSAAL Trigger: GAGCGCCGCCGAGGAGCTGGAACTCACAGTTCTGAAGATCAGCCACAGCCTGGACGAGCTGAGGAGAGAACTCCATTGTACAGCCATGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS TCA 90 bp | CCAAGATCCGTTCCCTGTGCTCGTGGCTGGTGTAGGCAGAATCAGTaGAGTCCTCCACATGCTCCAAGACGGCCTCCAATGCGGCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PRSVPCARGWCRQNQ*SPPHAPRRPPMRQK Trigger: TTTCTGCCGCATTGGAGGCCGTCTTGGAGCATGTGGAGGACTTCACTGATTCTGCCTACACCAGCCACGAGCACAGGGAACGGATCTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 90 bp | CCACATGATCAGCATGGAATTTTAACAGGTCGGCTGCCAGCTGCATaGCTGTACAATGGAGTTCTCTCCTCAGCTCGTCCAGGCTGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PHDQHGILTGRLPAA*LYNGVLSSARPGCG Trigger: GCCACAGCCTGGACGAGCTGAGGAGAGAACTCCATTGTACAGCCATGCAGCTGGCAGCCGACCTGTTAAAATTCCATGCTGATCATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | CATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATGTGGGGATCTGCACGACGCCTGTTTaGTCTGTCAGAATCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: HVCSGMGIHECRSTHVGICTTPV*SVRIVT Trigger: GGTCACGATTCTGACAGACAAAACAGGCGTCGTGCA...GATCCCCACATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS TCA 90 bp | CGGGCGGCCTGCACGACGCCTGTTTTGTCTGTCAGAATCGTGACCTaGCCATCTGATTCCAAATGGCTCCGTTTAGTCACATCTGTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RAACTTPVLSVRIVT*PSDSKWLRLVTSVS Trigger: ACTCACAGATGTGACTAAACGGAGCCATTTGGAATCAGATGGTCAGGTCACGATTCTGACAGACAAAACAGGCGTCGTGCAGGCCGCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS GCA 90 bp | GAGGAGAGCAATCCCAGCTTCAGCCCGAGCTTTGCTATCTTGGCTTaGTCCTCCGAGTCAGGTTTGTCGGGCTTTAGTGACTTCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EESNPSFSPSFAILA*SSESGLSGFSDFRF Trigger: AAACCTGAAGTCACTAAAGCCCGACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 90 bp | TCCAGGGCCACTCTCATCCGGTCAAACACTCCTTCTTTGTTTGTGTaGGCTGACTCACAGCTGGGATGCCTGAGACATGTCTTTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRATLIRSNTPSLFV*ADSQLGCLRHVFEA Trigger: AGCCTCAAAGACATGTCTCAGGCATCCCAGCTGTGAGTCAGCCCACACAAACAAAGAAGGAGTGTTTGACCGGATGAGAGTGGCCCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 90 bp | GCATGGAATTTTAACAGGTCGGCTGCCAGCTGCATGGCTGTACAATaGAGTTCTCTCCTCAGCTCGTCCAGGCTGTGGCTGATCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWNFNRSAASCMAVQ*SSLLSSSRLWLIFR Trigger: TCTGAAGATCAGCCACAGCCTGGACGAGCTGAGGAGAGAACTCCATTGTACAGCCATGCAGCTGGCAGCCGACCTGTTAAAATTCCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 90 bp | CATCAGAGGAGAGCAATCCCAGCTTCAGCCCGAGCTTTGCTATCTTaGCTTGCTCCTCCGAGTCAGGTTTGTCGGGCTTTAGTGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HQRRAIPASARALLS*LAPPSQVCRALVTS Trigger: TGAAGTCACTAAAGCCCGACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTCCTCTGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | GTCAAACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCATGCCAAGTTGACCGCTaGTCCCACACGCTGAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: VKRVSMSAQAWVYMSAVACQVDR*SHTLNR Trigger: GCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCA...TGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGTTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGTCTGCGATCTAAACAGCCTCTTGGTTCCGATGTTCTGTCTTCTGCAGCTTCCAACTGCCAAGTaGACCGCTTGTCCCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: TGVCDLNSLLVPMFCLLQLPTAK*TACPTR Trigger: GCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAAG...CTGCAGAAGACAGAACATCGGAACCAAGAGGCTGTTTAGATCGCAGACACCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 90 bp | GGCAGAATCAGTGAAGTCCTCCACATGCTCCAAGACGGCCTCCAATaGGGCAGAAAGGTTCTCTTTGGACTCAAAGCAAACATTCTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GRISEVLHMLQDGLQ*GRKVLFGLKANILP Trigger: CGGGAGAATGTTTGCTTTGAGTCCAAAGAGAACCTTTCTGCCGCATTGGAGGCCGTCTTGGAGCATGTGGAGGACTTCACTGATTCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | GCTGGGCCATCTCCTGGGCAACCTTTGCCTTGCTTCATTACACAGCTTACAAGGACACTCCTTCTTTGTTaGTGTGGGCTGACTCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGPSPGQPLPCFITQLTRTLLLC*CGLTHS Trigger: GCTGTGAGTCAGCCCACACAAACAAAGAAGGAGTGT...CCTTGTAAGCTGTGTAATGAAGCAAGGCAAAGGTTGCCCAGGAGATGGCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAACCAGCAGCAGCACTTTaGTCACTGAGGAGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TAYKVHRFPAESSSQPKKPAAAL*SLRRAA Trigger: TGCTGCTCTCCTCAGTGACAAAAGTGCTGCTGCTGG...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAACCGAGCTTTGCTATCTaGGCTTGCTCCTCCGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAYKVHRFPAESSSQPKKPSFAI*ACSSES Trigger: TGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGG...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 90 bp | TCAAACACTCCTTCTTTGTTTGTGTGGGCTGACTCACAGCTGGGATaGCTGAGACATGTCTTTGAGGCTGTAAGGAGCATCATCGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: SNTPSLFVWADSQLG*LRHVFEAVRSIIVP Trigger: GGGTACGATGATGCTCCTTACAGCCTCAAAGACATGTCTCAGGCATCCCAGCTGTGAGTCAGCCCACACAAACAAAGAAGGAGTGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATCACACGCTGAATCGCTaGCAGGGTTTTATCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TCIHVCSGMGIHECRSTHHTLNR*QGFIRL Trigger: AAGTCTGATAAAACCCTGCAAGCGATTCAGCGTGTG...ATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | ACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATGATGTCACTATCTGCTaGATGACTACACGATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TCIHVCSGMGIHECRSTHDVTIC*MTTRSA Trigger: GGCAGATCGTGTAGTCATCAAGCAGATAGTGACATC...ATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | GGATTCCATCCATTATTCAGGGCTGCCTGGTCAGCTGTGCTTACTACAGCTAACCTTTGCTATCTTGGCTaGCTCCTCCGAGTCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GFHPLFRAAWSAVLTTANLCYLG*LLRVRF Trigger: AAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAG...GTTAGCTGTAGTAAGCACAGCTGACCAGGCAGCCCTGAATAATGGATGGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 90 bp | GTTTTCGTTGGCTATAGCTTCCCCTACTTTAACAAATCTTCCAACTaGCAAGTTGACCGCTTGTCCCACACGCTGAATCGCTTGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFVGYSFPYFNKSSN*QVDRLSHTLNRLQG Trigger: ACCCTGCAAGCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAAGATTTGTTAAAGTAGGGGAAGCTATAGCCAACGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | ACGTGTATCCATGTCTGCTCAGGCATGGGTATACATGAGTGCCGTAGCACCCATAAATCCCAGTTTTCGTaGGCTATAGCTTCCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TCIHVCSGMGIHECRSTHKSQFS*AIASPT Trigger: AGTAGGGGAAGCTATAGCCAACGAAAACTGGGATTT...ATGGGTGCTACGGCACTCATGTATACCCATGCCTGAGCAGACATGGATACACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTGCTTCAGCCCGAGCTTaGCTATCTTGGCTTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: DSWDIWCVLKNTLSTVFVASARA*LSWLAP Trigger: AGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGC...AACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS TCA 90 bp | AACACATCACTGATTTCCCTTAGCAGCGTCGCCATGTCACTCATCTaGGACTCCCAAGCTTCACAAAACACATCCAGGTTTTCCTTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: NTSLISLSSVAMSLI*DSQASQNTSRFSLA Trigger: CGCTAAGGAAAACCTGGATGTGTTTTGTGAAGCTTGGGAGTCTCAGATGAGTGACATGGCGACGCTGCTAAGGGAAATCAGTGATGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 90 bp | GAAATGTCTCCTCTGCATGTATGCACGTTATCTCAAGGGGTTCTGTaGCGGATATATGCCGCAACAATCGACATGTCTCCACAAGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: EMSPLHVCTLSQGVL*RIYAATIDMSPQAV Trigger: AACAGCTTGTGGAGACATGTCGATTGTTGCGGCATATATCCGGCACAGAACCCCTTGAGATAACGTGCATACATGCAGAGGAGACATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ATTCAGCCGCCATTAAGACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGATTGTTTCACCTGCTaGCTTGGCTTCGATGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQPPLRQLGYLVCAEKHPDCFTC*LGFDAG Trigger: GCCTGCATCGAAGCCAAGCAAGCAGGTGAAACAATC...AGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTCTTAATGGCGGCTGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAACTAGCCTTTCCATGGTaGCGAGAATCTTGTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: TAYKVHRFPAESSSQPKKLAFPW*RESCFS Trigger: CGAGAAACAAGATTCTCGCAACCATGGAAAGGCTAG...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGTCTGCGATCTAAACAGCCTCTTGGTTCCGATGTTCTGTCTTCTGCAGTCAAACACTCCTTCTTaGTTTGTGTGGGCTGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGVCDLNSLLVPMFCLLQSNTPS*FVWADS Trigger: TGAGTCAGCCCACACAAACAAAGAAGGAGTGTTTGA...CTGCAGAAGACAGAACATCGGAACCAAGAGGCTGTTTAGATCGCAGACACCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | GCTGAAAAACACCCTGAGCACAGTGTTTGTTTTCAAATTGCACTGCTGTTAGAACCTCGGCGGCGCTCTTaGTCTTCCTGCTTTGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: AEKHPEHSVCFQIALLLEPRRRS*SSCFGF Trigger: AAACCCAAAGCAGGAAGACAAAGAGCGCCGCCGAGG...TTCTAACAGCAGTGCAATTTGAAAACAAACACTGTGCTCAGGGTGTTTTTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 90 bp | AGCCTTTCCATGGTTGCGAGAATCTTGTTTCTCGATGTCACTATCTaGTTGATGACTACACGATCTGCCAGCAGCAGCACTTTTGTCACT | + |
|
Preference number: 5 (lower is better) Translates to: SLSMVARILFLDVTI*LMTTRSASSSTFVT Trigger: AGTGACAAAAGTGCTGCTGCTGGCAGATCGTGTAGTCATCAAGCAGATAGTGACATCGAGAAACAAGATTCTCGCAACCATGGAAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | CAGCAGAGTCATCTTCCCAGCCCAAGAAAAGGTTTAAATCCTAAAGTTAAAAAGTGCCAAGTTGACCGCTaGTCCCACACGCTGAATCGC | + |
|
Preference number: 5 (lower is better) Translates to: QQSHLPSPRKGLNPKVKKCQVDR*SHTLNR Trigger: GCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCA...CTTTTTAACTTTAGGATTTAAACCTTTTCTTGGGCTGGGAAGATGACTCTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | ACAGCTTACAAGGTACACAGGTTTCCAGCAGAGTCATCTTCCCAGCCCAAGAAAAAATCCCAGTTTTCGTaGGCTATAGCTTCCCCTACT | + |
|
Preference number: 5 (lower is better) Translates to: TAYKVHRFPAESSSQPKKKSQFS*AIASPT Trigger: AGTAGGGGAAGCTATAGCCAACGAAAACTGGGATTT...TTTCTTGGGCTGGGAAGATGACTCTGCTGGAAACCTGTGTACCTTGTAAGCTGT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | CAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTTTTGCACGACGCCTGTTTaGTCTGTCAGAATCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QLGYLVCAEKHPEHSVCFCTTPV*SVRIVT Trigger: GGTCACGATTCTGACAGACAAAACAGGCGTCGTGCA...AAAACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | GGATTCCATCCATTATTCAGGGCTGCCTGGTCAGCTGTGCTTACTACAGCTAACGCAGAAAGGTTCTCTTaGGACTCAAAGCAAACATTC | + |
|
Preference number: 5 (lower is better) Translates to: GFHPLFRAAWSAVLTTANAERFS*DSKQTF Trigger: GAATGTTTGCTTTGAGTCCAAAGAGAACCTTTCTGC...GTTAGCTGTAGTAAGCACAGCTGACCAGGCAGCCCTGAATAATGGATGGAATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS TCA 90 bp | AATATTCACCTTCAACTCTTTAATCCCAGTAAAAATGCTGACAGATaGGCTGTCGGTCTCTCCGCTGAGTCTGCAGTCAGTCACGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: NIHLQLFNPSKNADR*AVGLSAESAVSHDL Trigger: GAGATCGTGACTGACTGCAGACTCAGCGGAGAGACCGACAGCTCATCTGTCAGCATTTTTACTGGGATTAAAGAGTTGAAGGTGAATATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 90 bp | CTCCGTTTAGTCACATCTGTGAGTGAGGCGATTGTTTCACCTGCTTaGTTGGCTTCGATGCAGGCGATGTTAATTTCTTCTTTCAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLVTSVSEAIVSPA*LASMQAMLISSFKS Trigger: GGATTTGAAAGAAGAAATTAACATCGCCTGCATCGAAGCCAAGCAAGCAGGTGAAACAATCGCCTCACTCACAGATGTGACTAAACGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTCACACGCTGAATCGCTaGCAGGGTTTTATCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: DSWDIWCVLKNTLSTVFVHTLNR*QGFIRL Trigger: AAGTCTGATAAAACCCTGCAAGCGATTCAGCGTGTG...AACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | TTTGTTGATTTTGTGCACAACTGCACATGTGAGTATGTGTGTAAGTCAAACGTGCCAGCAGCAGCACTTTaGTCACTGAGGAGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVDFVHNCTCEYVCKSNVPAAAL*SLRRAA Trigger: TGCTGCTCTCCTCAGTGACAAAAGTGCTGCTGCTGG...CACGTTTGACTTACACACATACTCACATGTGCAGTTGTGCACAAAATCAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTGATGTCACTATCTGCTaGATGACTACACGATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: DSWDIWCVLKNTLSTVFVDVTIC*MTTRSA Trigger: GGCAGATCGTGTAGTCATCAAGCAGATAGTGACATC...AACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | CCAAGGAGAATGTGCATTTGCAATTGCTTCTTTGGGATTCAGCCGCCATTAAGATATTCTTCGTGGGCTTaGGAAGTGAAAGATGGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PRRMCICNCFFGIQPPLRYSSWA*EVKDGR Trigger: GCGACCATCTTTCACTTCCAAAGCCCACGAAGAATA...TCTTAATGGCGGCTGAATCCCAAAGAAGCAATTGCAAATGCACATTCTCCTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | GACAGTTGGGATATTTGGTGTGTGCTGAAAAACACCCTGAGCACAGTGTTTGTTAGCAGAAATGATCTGTaGGCCAGTCACCTGAAATGT | + |
|
Preference number: 5 (lower is better) Translates to: DSWDIWCVLKNTLSTVFVSRNDL*ASHLKC Trigger: ACATTTCAGGTGACTGGCCAACAGATCATTTCTGCT...AACAAACACTGTGCTCAGGGTGTTTTTCAGCACACACCAAATATCCCAACTGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | GGATTCCATCCATTATTCAGGGCTGCCTGGTCAGCTGTGCTTACTACAGCTAACAGGAGAAGCATAAGTTaGTCATCATCTTTTAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GFHPLFRAAWSAVLTTANRRSIS*SSSFSC Trigger: ACAGCTAAAAGATGATGACAAACTTATGCTTCTCCT...GTTAGCTGTAGTAAGCACAGCTGACCAGGCAGCCCTGAATAATGGATGGAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS-3UTR CAA 90 bp | TACAATTCTTTGTTGATTTTGTGCACAACTGCACATGTGAGTATGTGTGTAAGTGATTGTTTCACCTGCTaGCTTGGCTTCGATGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YNSLLILCTTAHVSMCVSDCFTC*LGFDAG Trigger: GCCTGCATCGAAGCCAAGCAAGCAGGTGAAACAATC...ACTTACACACATACTCACATGTGCAGTTGTGCACAAAATCAACAAAGAATTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS-3UTR CAA 90 bp | TTGTTGATTTTGTGCACAACTGCACATGTGAGTATGTGTGTAAGTCAAACGTGTCTAGCCTTTCCATGGTaGCGAGAATCTTGTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LLILCTTAHVSMCVSQTCLAFPW*RESCFS Trigger: CGAGAAACAAGATTCTCGCAACCATGGAAAGGCTAG...ACACGTTTGACTTACACACATACTCACATGTGCAGTTGTGCACAAAATCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107612.3 |
||
| CDS TCA 90 bp | ACCTTTAGAAAGACTTTACTCTGCAAAGATGTCTTAGTTATTGTCTaGAGCTGGTGGCATAGAGGAATAAGTTTGTTTATTTCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TFRKTLLCKDVLVIV*SWWHRGISLFISRR Trigger: TCTCCTGGAAATAAACAAACTTATTCCTCTATGCCACCAGCTTCAGACAATAACTAAGACATCTTTGCAGAGTAAAGTCTTTCTAAAGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 72 bp | CCCGAGTCGAAGGTGAAGCCAGCCGCGTTGGAGGAGTaGACAGCTCCCGCACCGCCACCGCCCGGGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PESKVKPAALEE*TAPAPPPPGTG Trigger: TCCAGTCCCGGGCGGTGGCGGTGCGGGAGCTGTCCACTCCTCCAACGCGGCTGGCTTCACCTTCGACTCGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 90 bp | CGCGTCCTGATCTCCAGTCCCGAGTCGAAGGTGAAGCCAGCCGCGTaGGAGGAGTGGACAGCTCCCGCACCGCCACCGCCCGGGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RVLISSPESKVKPAA*EEWTAPAPPPPGTG Trigger: TCCAGTCCCGGGCGGTGGCGGTGCGGGAGCTGTCCACTCCTCCAACGCGGCTGGCTTCACCTTCGACTCGGGACTGGAGATCAGGACGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 72 bp | ATCTCCAGTCCCGAGTCGAAGGTGAAGCCAGCCGCGTaGGAGGAGTGGACAGCTCCCGCACCGCCACCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ISSPESKVKPAA*EEWTAPAPPPP Trigger: GGGCGGTGGCGGTGCGGGAGCTGTCCACTCCTCCAACGCGGCTGGCTTCACCTTCGACTCGGGACTGGAGAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS TCA 72 bp | GACTACACGATCTGCCAGCAGCAGCACTTTTGTCACTaGGGAGAGCAGCAGCCGGGCGGCCTGCACGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: DYTICQQQHFCH*GEQQPGGLHDA Trigger: GGCGTCGTGCAGGCCGCCCGGCTGCTGCTCTCCTCAGTGACAAAAGTGCTGCTGCTGGCAGATCGTGTAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS GCA 72 bp | ACTTTTGTCACTGAGGAGAGCAGCAGCCGGGCGGCCTaGACGACGCCTGTTTTGTCTGTCAGAATCGTGACC | + |
|
Preference number: 6 (lower is better) Translates to: TFVTEESSSRAA*TTPVLSVRIVT Trigger: GGTCACGATTCTGACAGACAAAACAGGCGTCGTGCAGGCCGCCCGGCTGCTGCTCTCCTCAGTGACAAAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 72 bp | GAGAGCAATCCCAGCTTCAGCCCGAGCTTTGCTATCTaGGCTTGCTCCTCCGAGTCAGGTTTGTCGGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: ESNPSFSPSFAI*ACSSESGLSGF Trigger: AAAGCCCGACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 90 bp | GCATCAGAGGAGAGCAATCCCAGCTTCAGCCCGAGCTTTGCTATCTaGGCTTGCTCCTCCGAGTCAGGTTTGTCGGGCTTTAGTGACTTC | + |
|
Preference number: 6 (lower is better) Translates to: ASEESNPSFSPSFAI*ACSSESGLSGFSDF Trigger: GAAGTCACTAAAGCCCGACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTCCTCTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 90 bp | CACAGTCAGCATCAGAGGAGAGCAATCCCAGCTTCAGCCCGAGCTTaGCTATCTTGGCTTGCTCCTCCGAGTCAGGTTTGTCGGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: HSQHQRRAIPASARA*LSWLAPPSQVCRAL Trigger: TAAAGCCCGACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTCCTCTGATGCTGACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 72 bp | ATCAGAGGAGAGCAATCCCAGCTTCAGCCCGAGCTTTaGTATCTTGGCTTGCTCCTCCGAGTCAGGTTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: IRGEQSQLQPEL*YLGLLLRVRFV Trigger: GACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTCCTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 72 bp | GTACAATGGAGTTCTCTCCTCAGCTCGTCCAGGCTGTaGCTGATCTTCAGAACTGTGAGTTCCAGCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: VQWSSLLSSSRL*LIFRTVSSSSS Trigger: CGAGGAGCTGGAACTCACAGTTCTGAAGATCAGCCACAGCCTGGACGAGCTGAGGAGAGAACTCCATTGTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 72 bp | AGAGCAATCCCAGCTTCAGCCCGAGCTTTGCTATCTTaGCTTGCTCCTCCGAGTCAGGTTTGTCGGGCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: RAIPASARALLS*LAPPSQVCRAL Trigger: TAAAGCCCGACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 72 bp | CATCAGAGGAGAGCAATCCCAGCTTCAGCCCGAGCTTaGCTATCTTGGCTTGCTCCTCCGAGTCAGGTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: HQRRAIPASARA*LSWLAPPSQVC Trigger: ACAAACCTGACTCGGAGGAGCAAGCCAAGATAGCAAAGCTCGGGCTGAAGCTGGGATTGCTCTCCTCTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 72 bp | CAGCATGGAATTTTAACAGGTCGGCTGCCAGCTGCATaGCTGTACAATGGAGTTCTCTCCTCAGCTCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: QHGILTGRLPAA*LYNGVLSSARP Trigger: TGGACGAGCTGAGGAGAGAACTCCATTGTACAGCCATGCAGCTGGCAGCCGACCTGTTAAAATTCCATGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CCA 72 bp | ACTCTCATCCGGTCAAACACTCCTTCTTTGTTTGTGTaGGCTGACTCACAGCTGGGATGCCTGAGACATGTC | + |
|
Preference number: 6 (lower is better) Translates to: TLIRSNTPSLFV*ADSQLGCLRHV Trigger: GACATGTCTCAGGCATCCCAGCTGTGAGTCAGCCCACACAAACAAAGAAGGAGTGTTTGACCGGATGAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS TCA 72 bp | CTTCAGGTTTGCACTATTCTTCGTGGGCTTTGGAAGTaGAAGATGGTCGCACCTCTCTCCTCGTCTTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LQVCTILRGLWK*KMVAPLSSSSF Trigger: GAAGGAAGACGAGGAGAGAGGTGCGACCATCTTTCACTTCCAAAGCCCACGAAGAATAGTGCAAACCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 72 bp | GGCTATAGCTTCCCCTACTTTAACAAATCTTCCAACTaGCAAGTTGACCGCTTGTCCCACACGCTGAATCGC | + |
|
Preference number: 6 (lower is better) Translates to: GYSFPYFNKSSN*QVDRLSHTLNR Trigger: GCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAAGATTTGTTAAAGTAGGGGAAGCTATAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS GCA 72 bp | CCTCTGCATGTATGCACGTTATCTCAAGGGGTTCTGTaGCGGATATATGCCGCAACAATCGACATGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PLHVCTLSQGVL*RIYAATIDMSP Trigger: TGGAGACATGTCGATTGTTGCGGCATATATCCGGCACAGAACCCCTTGAGATAACGTGCATACATGCAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 72 bp | TCCAAGACGGCCTCCAATGCGGCAGAAAGGTTCTCTTaGGACTCAAAGCAAACATTCTCCCGAAGAGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKTASNAAERFS*DSKQTFSRRAS Trigger: TGAAGCTCTTCGGGAGAATGTTTGCTTTGAGTCCAAAGAGAACCTTTCTGCCGCATTGGAGGCCGTCTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 90 bp | TCCACATGCTCCAAGACGGCCTCCAATGCGGCAGAAAGGTTCTCTTaGGACTCAAAGCAAACATTCTCCCGAAGAGCTTCAATATTCACC | + |
|
Preference number: 6 (lower is better) Translates to: STCSKTASNAAERFS*DSKQTFSRRASIFT Trigger: GGTGAATATTGAAGCTCTTCGGGAGAATGTTTGCTTTGAGTCCAAAGAGAACCTTTCTGCCGCATTGGAGGCCGTCTTGGAGCATGTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS TCA 72 bp | CTTCCAACTGCCAAGTTGACCGCTTGTCCCACACGCTaGATCGCTTGCAGGGTTTTATCAGACTTTTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LPTAKLTACPTR*IACRVLSDFLV Trigger: TACCAAAAAGTCTGATAAAACCCTGCAAGCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS TCA 72 bp | TGCACGACGCCTGTTTTGTCTGTCAGAATCGTGACCTaGCCATCTGATTCCAAATGGCTCCGTTTAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: CTTPVLSVRIVT*PSDSKWLRLVT Trigger: TGTGACTAAACGGAGCCATTTGGAATCAGATGGTCAGGTCACGATTCTGACAGACAAAACAGGCGTCGTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS TCA 72 bp | CTGATTTCCCTTAGCAGCGTCGCCATGTCACTCATCTaGGACTCCCAAGCTTCACAAAACACATCCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LISLSSVAMSLI*DSQASQNTSRF Trigger: AAACCTGGATGTGTTTTGTGAAGCTTGGGAGTCTCAGATGAGTGACATGGCGACGCTGCTAAGGGAAATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 72 bp | ATGCACGTTATCTCAAGGGGTTCTGTGCCGGATATATaGCGCAACAATCGACATGTCTCCACAAGCTGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: MHVISRGSVPDI*RNNRHVSTSCS Trigger: AGAACAGCTTGTGGAGACATGTCGATTGTTGCGGCATATATCCGGCACAGAACCCCTTGAGATAACGTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 90 bp | CTTTCCATGGTTGCGAGAATCTTGTTTCTCGATGTCACTATCTGCTaGATGACTACACGATCTGCCAGCAGCAGCACTTTTGTCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSMVARILFLDVTIC*MTTRSASSSTFVTE Trigger: CTCAGTGACAAAAGTGCTGCTGCTGGCAGATCGTGTAGTCATCAAGCAGATAGTGACATCGAGAAACAAGATTCTCGCAACCATGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS TCA 72 bp | GCCTGTTTTGTCTGTCAGAATCGTGACCTGACCATCTaGTTCCAAATGGCTCCGTTTAGTCACATCTGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ACFVCQNRDLTI*FQMAPFSHICE Trigger: CTCACAGATGTGACTAAACGGAGCCATTTGGAATCAGATGGTCAGGTCACGATTCTGACAGACAAAACAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CCA 72 bp | TTTGCACTATTCTTCGTGGGCTTTGGAAGTGAAAGATaGTCGCACCTCTCTCCTCGTCTTCCTTCAAACACA | + |
|
Preference number: 6 (lower is better) Translates to: FALFFVGFGSER*SHLSPRLPSNT Trigger: TGTGTTTGAAGGAAGACGAGGAGAGAGGTGCGACCATCTTTCACTTCCAAAGCCCACGAAGAATAGTGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 90 bp | AGCTTCCCCTACTTTAACAAATCTTCCAACTGCCAAGTTGACCGCTaGTCCCACACGCTGAATCGCTTGCAGGGTTTTATCAGACTTTTT | + |
|
Preference number: 6 (lower is better) Translates to: SFPYFNKSSNCQVDR*SHTLNRLQGFIRLF Trigger: AAAAAGTCTGATAAAACCCTGCAAGCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAAGATTTGTTAAAGTAGGGGAAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 90 bp | CGTTTAGTCACATCTGTGAGTGAGGCGATTGTTTCACCTGCTTGCTaGGCTTCGATGCAGGCGATGTTAATTTCTTCTTTCAAATCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RLVTSVSEAIVSPAC*ASMQAMLISSFKSQ Trigger: CTGGGATTTGAAAGAAGAAATTAACATCGCCTGCATCGAAGCCAAGCAAGCAGGTGAAACAATCGCCTCACTCACAGATGTGACTAAACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 90 bp | GACTCCCAAGCTTCACAAAACACATCCAGGTTTTCCTTAGCGATTTaGCTAGACGGATGCAACGTCAACGTTTCAGCAGCAGAAATGATC | + |
|
Preference number: 6 (lower is better) Translates to: DSQASQNTSRFSLAI*LDGCNVNVSAAEMI Trigger: GATCATTTCTGCTGCTGAAACGTTGACGTTGCATCCGTCTAGCAAAATCGCTAAGGAAAACCTGGATGTGTTTTGTGAAGCTTGGGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS TCA 72 bp | GTTTCAGCAGCAGAAATGATCTGTTGGCCAGTCACCTaGAATGTCTCCTCTGCATGTATGCACGTTATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VSAAEMICWPVT*NVSSACMHVIS Trigger: TGAGATAACGTGCATACATGCAGAGGAGACATTTCAGGTGACTGGCCAACAGATCATTTCTGCTGCTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 72 bp | TACTTTAACAAATCTTCCAACTGCCAAGTTGACCGCTaGTCCCACACGCTGAATCGCTTGCAGGGTTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: YFNKSSNCQVDR*SHTLNRLQGFI Trigger: GATAAAACCCTGCAAGCGATTCAGCGTGTGGGACAAGCGGTCAACTTGGCAGTTGGAAGATTTGTTAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 72 bp | ACATCTGTGAGTGAGGCGATTGTTTCACCTGCTTGCTaGGCTTCGATGCAGGCGATGTTAATTTCTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TSVSEAIVSPAC*ASMQAMLISSF Trigger: GAAAGAAGAAATTAACATCGCCTGCATCGAAGCCAAGCAAGCAGGTGAAACAATCGCCTCACTCACAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 72 bp | GTTGCGAGAATCTTGTTTCTCGATGTCACTATCTGCTaGATGACTACACGATCTGCCAGCAGCAGCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: VARILFLDVTIC*MTTRSASSSTF Trigger: AAAAGTGCTGCTGCTGGCAGATCGTGTAGTCATCAAGCAGATAGTGACATCGAGAAACAAGATTCTCGCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS CAA 72 bp | GCTTCACAAAACACATCCAGGTTTTCCTTAGCGATTTaGCTAGACGGATGCAACGTCAACGTTTCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASQNTSRFSLAI*LDGCNVNVSAA Trigger: TGCTGCTGAAACGTTGACGTTGCATCCGTCTAGCAAAATCGCTAAGGAAAACCTGGATGTGTTTTGTGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS GCA 72 bp | ACATCCAGGTTTTCCTTAGCGATTTTGCTAGACGGATaGAACGTCAACGTTTCAGCAGCAGAAATGATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSRFSLAILLDG*NVNVSAAEMIC Trigger: ACAGATCATTTCTGCTGCTGAAACGTTGACGTTGCATCCGTCTAGCAAAATCGCTAAGGAAAACCTGGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||
| CDS CAA 72 bp | TTTACTTTCTCTAGCCTTTCCATGGTTGCGAGAATCTaGTTTCTCGATGTCACTATCTGCTTGATGACTACA | + |
|
Preference number: 6 (lower is better) Translates to: FTFSSLSMVARI*FLDVTICLMTT Trigger: TGTAGTCATCAAGCAGATAGTGACATCGAGAAACAAGATTCTCGCAACCATGGAAAGGCTAGAGAAAGTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045142.15 ENSMUST00000107612.3 |
||
| CDS TCA 72 bp | AAGACTTTACTCTGCAAAGATGTCTTAGTTATTGTCTaGAGCTGGTGGCATAGAGGAATAAGTTTGTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: KTLLCKDVLVIV*SWWHRGISLFI Trigger: AATAAACAAACTTATTCCTCTATGCCACCAGCTTCAGACAATAACTAAGACATCTTTGCAGAGTAAAGTCTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045142.15 |
||