Pregenerated sensors for CTNNA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060843Ensembl transcript IDs: ENSMUST00000075099.5, ENSMUST00000105440.8, ENSMUST00000105441.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTAAAATTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATaGAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LKFPRARVTHFWQVR*KVRWVKESMDANWE Trigger: TTCCCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAATTTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR CCA 90 bp | GGTTTTCCTTCCCAGGGATATAGAATGCATGGGTGCAGACATTTCTaGGTAATAGGAACTCACATTATCACTTACGCTCATTTTGTAATG | + |
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Preference number: 1 (lower is better) Translates to: GFPSQGYRMHGCRHF*VIGTHIITYAHFVM Trigger: CATTACAAAATGAGCGTAAGTGATAATGTGAGTTCCTATTACCCAGAAATGTCTGCACCCATGCATTCTATATCCCTGGGAAGGAAAACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGGCAGTGTGGTTAGCCTaGGGTGTAGAAATGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: WQVRCKVRWVKESMDANWAVWLA*GVEMGT Trigger: AGTGCCCATTTCTACACCCCAGGCTAACCACACTGC...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR TCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGAGAACCAATGAACCATaGAATAAAGCAGTGTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: FPRARVTHFWQVRCKVRWRTNEP*NKAVWL Trigger: TAACCACACTGCTTTATTTCATGGTTCATTGGTTCT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR GCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTCCCAGGGATATAGAATaGATGGGTGCAGACATTTCT | + |
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Preference number: 2 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGPRDIE*MGADIS Trigger: AGAAATGTCTGCACCCATGCATTCTATATCCCTGGG...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR CCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTAGGGTGACACATTTTTaGCAGGTTAGATGCAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGRVTHF*QVRCKV Trigger: AACCTTGCATCTAACCTGCCAAAAATGTGTCACCCT...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGTTCCCAGGGCTAGGGTaGCACATTTTTGGCAGGTTA | + |
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Preference number: 2 (lower is better) Translates to: TKSPELLITIEIQGSSIMFPGLG*HIFGRL Trigger: TAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAA...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAATTCATGATGAACAGTaGTTAAAATTTCCCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLIHDEQ*LKFPRA Trigger: AGCCCTGGGAAATTTTAATCACTGTTCATCATGAAT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR GCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGTATAGAATGCATGGGTaGAGACATTTCTGGGTAATA | + |
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Preference number: 2 (lower is better) Translates to: WQVRCKVRWVKESMDANWYRMHG*RHFWVI Trigger: TATTACCCAGAAATGTCTGCACCCATGCATTCTATA...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR CCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAAGATGCAAGGTTAGGTaGGTTAAAGAAAGTATGGAT | + |
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Preference number: 2 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLRCKVR*VKESMD Trigger: ATCCATACTTTCTTTAACCCACCTAACCTTGCATCT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR GCA 72 bp | CCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATaGAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCT | + |
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Preference number: 3 (lower is better) Translates to: PRARVTHFWQVR*KVRWVKESMDA Trigger: AGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR CCA 72 bp | CCCACACCAACAACAAACAAAAATTCACTTCTCCAGTaGGTGATGACTCTACAGGTATGCTCTGATAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PTPTTNKNSLLQ*VMTLQVCSDKP Trigger: GGGCTTATCAGAGCATACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTAACCAGTTAACTAGGTaGTGCTGGCCGTATAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGNQLTR*CWPYRV Trigger: TACTCTATACGGCCAGCACAACCTAGTTAACTGGTT...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR CCA 72 bp | TCCCAGGGATATAGAATGCATGGGTGCAGACATTTCTaGGTAATAGGAACTCACATTATCACTTACGCTCAT | + |
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Preference number: 3 (lower is better) Translates to: SQGYRMHGCRHF*VIGTHIITYAH Trigger: ATGAGCGTAAGTGATAATGTGAGTTCCTATTACCCAGAAATGTCTGCACCCATGCATTCTATATCCCTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| 3UTR CCA 72 bp | GTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTaGGTTAAAGAAAGTATGGATGCTAATTGGGAAAAT | + |
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Preference number: 3 (lower is better) Translates to: VTHFWQVRCKVR*VKESMDANWEN Trigger: ATTTTCCCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGCGAGTCGGCCAACAGTaGGGCCCCACTGATGATGGC | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWRVGQQ*GPTDDG Trigger: GCCATCATCAGTGGGGCCGCACTGTTGGCCGACTCG...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAAGGGCGCGGGCGGCTTaGACCACGGCCTCCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLRARAA*TTASLF Trigger: GAAAAGGGAGGCCGTGGTTCAAGCCGCCCGCGCCCT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGCCCGGTGGAGGTCCCTaGTGCAGGACGAGTCGGCCA | + |
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Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWPGGGP*CRTSRP Trigger: TGGCCGACTCGTCCTGCACCAGGGACCTCCACCGGG...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGCCTTCATCCTCCACATaGCTACTGGGTGCCGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWPSSST*LLGAGV Trigger: GACCCCGGCACCCAGTAGTCATGTGGAGGATGAAGG...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTGGGTGCCGGGGTCCTaGAGAACTCTGGATGCGGAT | + |
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Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGWVPGS*RTLDAD Trigger: ATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTAGGTCCTGGAGAGCCTaGCGGATGGCATTGCACTCG | + |
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Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGRSWRA*RMALHS Trigger: CGAGTGCAATGCCATCCGCCAGGCTCTCCAGGACCT...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGCTTCTGTCTGAATGCTaGTGTGGCTACGGACCTCAT | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWLLSEC*CGYGPH Trigger: ATGAGGTCCGTAGCCACACCAGCATTCAGACAGAAG...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGCTGTTGGAAGGATTCTaGGGACAATTCACCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWLLEGF*GQFTRV Trigger: TACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAG...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGTGGCTACGGACCTCATaGTCATCTTCAAGGTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWWLRTS*SSSRSE Trigger: TTCTGACCTTGAAGATGACCATGAGGTCCGTAGCCA...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGAACTCTGGCTCTCTTTaGACGTCCTTTCTTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWNSGSL*TSFLPV Trigger: AACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGTCTTCTTGCTCATGTTaGCAATGGCAGTATTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWSSCSC*QWQYSG Trigger: CCCTGAATACTGCCATTGTCAACATGAGCAAGAAGA...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACACAGGGTCTCCAGGTaGTTGGCTGCAATTCTGACG | + |
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Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLHRVSR*LAAILT Trigger: CGTCAGAATTGCAGCCAATCACCTGGAGACCCTGTG...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTATCTGCCTCAGGCAGTTaGGTCATCTTGGCCCGATCA | + |
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Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLSASGS*VILARS Trigger: TGATCGGGCCAAGATGACTCAACTGCCTGAGGCAGA...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATTCGAACTTCCTGGAGTaGAGCTGCCAGCTCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNSNFLE*SCQLFL Trigger: AAGGAAGAGCTGGCAGCTGCACTCCAGGAAGTTCGA...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATCCACCTCCACGAGCCTaGCAGTGTGCTCATGAAATA | + |
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Preference number: 4 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNPPPRA*QCAHEI Trigger: TATTTCATGAGCACACTGGCAGGCTCGTGGAGGTGG...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGGTTTTCCCTTCTGTCTaGATGCTGGTGTGGCTACGG | + |
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Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWVFPSV*MLVWLR Trigger: CCGTAGCCACACCAGCATTCAGACAGAAGGGAAAAC...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGTGGCAGAGCCTCTTCTaGCAGCTGCCCATGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWWQSLF*QLPMFL Trigger: AAGAAACATGGGCAGCTGTCAGAAGAGGCTCTGCCA...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGCCAGCAAGTCCTGTTTaGACGGTGGATCTGGACACT | + |
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Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWPASPV*TVDLDT Trigger: AGTGTCCAGATCCACCGTGCAAACAGGACTTGCTGG...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGGACTCGAATGTTCTTTaGAAAGATGACACATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWDSNVL*KDDTCC Trigger: GCAGCATGTGTCATCTTTCCAAAGAACATTCGAGTC...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGTCCGTCAGCAGGTCCTaGAGAGCCTGGCGGATGGCA | + |
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Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMSVSRS*RAWRMA Trigger: TGCCATCCGCCAGGCTCTCCAGGACCTGCTGACGGA...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTGGTCCTGCAGAACTCTaGATGCGGATGATCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGGPAEL*MRMILV Trigger: CACCAAGATCATCCGCATCCAGAGTTCTGCAGGACC...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGGCTGCAAGAGGCACATaGCATCAATCATGTCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWAARGT*HQSCRQ Trigger: TTGCCGACATGATTGATGTCATGTGCCTCTTGCAGC...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATCTTCCTCTGTCACTGTaGGTGGGTTCAGGACAATTA | + |
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Preference number: 4 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNLPLSL*VGSGQL Trigger: TAATTGTCCTGAACCCACTCACAGTGACAGAGGAAG...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATCAAGTGCAGCATTTATaGTCTGTGGACACAGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNQVQHL*SVDTGS Trigger: AGACCCTGTGTCCACAGATCATAAATGCTGCACTTG...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTATTGACTCTTGGGTCTTaGTGCCAAAGCAAGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLLTLGS*CQSKCS Trigger: GCTGCACTTGCTTTGGCATCAAGACCCAAGAGTCAA...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGAATTCACTCATGACTTaGACTGGGTGGATCTTTTTC | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWNSLMT*TGWIFF Trigger: GAAAAAGATCCACCCAGTTCAAGTCATGAGTGAATT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGATACCTTCAGAGCTTTaGTCTCTTTTCGAACTTCCT | + |
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Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWIPSEL*SLFELP Trigger: AGGAAGTTCGAAAAGAGAGCAAAGCTCTGAAGGTAT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR GCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGACTTCCCAGTGTTGCTaGCTGAGGTTCAGGGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMTSQCC*LRFRGR Trigger: GCGCCCCCTGAACCTCAGGCAGCAACACTGGGAAGT...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAAAATTCTTGGCTGCCTaGATCAGGGAGGTGACACTG | + |
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Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLKFLAA*IREVTL Trigger: CAGTGTCACCTCCCTGATCCAGGCAGCCAAGAATTT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTGTCCTTACTGGCTTTaGGCGAAGCAACATCGGAAT | + |
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Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGCPYWL*AKQHRN Trigger: ATTCCGATGTTGCTTCGCTCAAAGCCAGTAAGGACA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR TCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGGTGTTTTTGACCACTTaGCTCTTGGGTCTTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWVFLTT*LLGLDA Trigger: GGCATCAAGACCCAAGAGTCAAGTGGTCAAAAACAC...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAAGTCGTCAATGCTGGTaGTGTCATCTACAGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLSRQCW*CHLQLQ Trigger: CTGAAGCTGTAGATGACATCACCAGCATTGACGACT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGAAATTATCAGCATCCTaGTCTCTCAAGGCTATAATG | + |
|
Preference number: 4 (lower is better) Translates to: FPRARVTHFWQVRCKVRWKLSAS*SLKAIM Trigger: CATTATAGCCTTGAGAGATCAGGATGCTGATAATTT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATTGGAAAGATGACACATaGTGCAAGAGGCACATGACA | + |
|
Preference number: 4 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNWKDDT*CKRHMT Trigger: TGTCATGTGCCTCTTGCAGCATGTGTCATCTTTCCA...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTCTGGCGCATTCTGGATaGCTTGGGAAGCATTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGLAHSG*LGKHLK Trigger: TTTCAAATGCTTCCCAAGGCATCCAGAATGCGCCAG...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGAGCACTTCCCAGTGTTaGTGCCTGAGGTTCAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMSTSQC*CLRFRG Trigger: CCCCCTGAACCTCAGGCAGCAACACTGGGAAGTGCT...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGACATCAAGAGCGTTCTaGATCTCTTCACAGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWTSRAF*ISSQTV Trigger: CACCGTCTGTGAAGAGATCCAGAACGCTCTTGATGT...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAAGCATTTATGATCTGTaGACACAGGGTCTCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLSIYDL*TQGLQV Trigger: CACCTGGAGACCCTGTGTCCACAGATCATAAATGCT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGGCAGTTGAGTCATCTTaGCCCGATCAGTTTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWAVESS*PDQFSL Trigger: AAGGGAAAACTGATCGGGCCAAGATGACTCAACTGC...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTATGTTCTTTGGAAAGATaGCACATGCTGCAAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLCSLER*HMLQEA Trigger: TGCCTCTTGCAGCATGTGTCATCTTTCCAAAGAACA...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACCCATCTTCATTCGTTaGCATGGAACAAGCCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLPIFIR*HGTSQI Trigger: AATCTGGCTTGTTCCATGTCAACGAATGAAGATGGG...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTTTCCATGGTGTTTTTaGCCACTTGACTCTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGFPWCF*PLDSWV Trigger: GACCCAAGAGTCAAGTGGTCAAAAACACCATGGAAA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTGGTGGAGGCAATGTATaGCATTTTCACTGTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGGGGNV*HFHCLH Trigger: GTGCAAACAGTGAAAATGTCATACATTGCCTCCACC...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTGTAGTGTTCCCATGTaGGCTTGTACATTTCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGCSVPM*ACTFPW Trigger: CCATGGAAATGTACAAGCGCACATGGGAACACTACA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAACATCTTCCAGGATGTaGCTTTCAGATACAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLTSSRM*LSDTAR Trigger: TCTGGCTGTATCTGAAAGCCACATCCTGGAAGATGT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAGCCTTGGGAAGCATTTaGAATTACATCAAGAGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLALGSI*NYIKSV Trigger: AACGCTCTTGATGTAATTTCAAATGCTTCCCAAGGC...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGTGCTCTTCACCTTCTTaGAGTCGGCGACTTGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMCSSPS*SRRLAQ Trigger: CTGAGCAAGTCGCCGACTTCAAGAAGGTGAAGAGCA...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGAAAGATGACACATGCTaGAAGAGGCACATGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWKDDTC*KRHMTS Trigger: TGATGTCATGTGCCTCTTGCAGCATGTGTCATCTTT...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTTGAAGTCGGCGACTTaGTCAGCAATCTTTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGLKSAT*SAIFSF Trigger: AAAGGAAAAGATTGCTGAGCAAGTCGCCGACTTCAA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAATTACATCAGTGGTATaGTTTAGTGGTCCTTTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLITSVV*FSGPFP Trigger: GGGGAAAGGACCACTAAAGCATACCACTGATGTAAT...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACTTCATTCGTTGACATaGAACAAGCCAGATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLLHSLT*NKPDLP Trigger: TGGCAAATCTGGCTTGTTCCATGTCAACGAATGAAG...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR TCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTCTTGGCAAGAACAATaGTGTCATTGCTTGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGSWQEQ*CHCLCH Trigger: ATGACACAAGCAATGACATCATTGTTCTTGCCAAGA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGAATCTTTTCCTTTTCTaGCTCAGGCAGTTGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WQVRCKVRWVKESMDANWNLFLF*LRQLSH Trigger: ATGACTCAACTGCCTGAGGCAGAAAAGGAAAAGATT...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGACCAGGGTAGTAACCTaGATTATCAGAGGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMTRVVT*IIRGSS Trigger: GCTGGAGCCTCTGATAATCCAGGTTACTACCCTGGT...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR GCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGATTTTGGATCTCTaGTTTAACTTGACTGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLQILDL*FNLTAD Trigger: ATCTGCAGTCAAGTTAAAGCAGAGATCCAAAATCTG...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTATGTCATAGATCTTCTTaGAGATGTCCACAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLCHRSS*RCPQTD Trigger: ATCAGTTTGTGGACATCTCCAAGAAGATCTATGACA...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
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| CDS-3UTR CCA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTCATAGATTACATCAGTaGTATGCTTTAGTGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGHRLHQ*YALVVL Trigger: AAGGACCACTAAAGCATACCACTGATGTAATCTATG...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGGCAATTTCATCCCTCTaGCTTGGAGATTTTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMAISSL*LGDFRS Trigger: GGACCTAAAATCTCCAAGCCAGAGGGATGAAATTGC...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CCA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGAATAGAATGCAGGAGTaGGGAGTTCTCCTTCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKSPELLITIEIQGSSIMNRMQE*GVLLQG Trigger: ACCTTGAAGGAGAACTCCCCACTCCTGCATTCTATT...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS GCA 90 bp | AAGGGCTTCTTAGCCGGAGCCTTCATCCTCCACATGACTACTGGGTaGCGGGGTCCTGCAGAACTCTGGATGCGGATGATCTTGGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KGFLAGAFILHMTTG*RGPAELWMRMILVE Trigger: CTCCACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAAGGCTCCGGCTAAGAAGCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 90 bp | CATGACATCAATCATGTCGGCAAGAACAAGGAGTCTTGTAACTGCTaGCAACAGGGCGCGGGCGGCTTGAACCACGGCCTCCCTTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: HDINHVGKNKESCNC*QQGAGGLNHGLPFR Trigger: CCGAAAAGGGAGGCCGTGGTTCAAGCCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTCCTTGTTCTTGCCGACATGATTGATGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 90 bp | CCATTTCACCCGCAACGATGTGAGCTACTCTTGCGGCCCGTCCTCTaGTGGCACCGGCAGCTCGGTCTAAATTATCAGCATCCTGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: PFHPQRCELLLRPVL*WHRQLGLNYQHPDL Trigger: GAGATCAGGATGCTGATAATTTAGACCGAGCTGCCGGTGCCATCAGAGGACGGGCCGCAAGAGTAGCTCACATCGTTGCGGGTGAAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 90 bp | GCACATGACATCAATCATGTCGGCAAGAACAAGGAGTCTTGTAACTaGTGCCAACAGGGCGCGGGCGGCTTGAACCACGGCCTCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AHDINHVGKNKESCN*CQQGAGGLNHGLPF Trigger: AAAAGGGAGGCCGTGGTTCAAGCCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTCCTTGTTCTTGCCGACATGATTGATGTCATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | AATCAAGGGCTTCTTAGCCGGAGCCTTCATCCTCCACATGACTACTaGGTGCCGGGGTCCTGCAGAACTCTGGATGCGGATGATCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: NQGLLSRSLHPPHDY*VPGSCRTLDADDLG Trigger: ACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAAGGCTCCGGCTAAGAAGCCCTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS TCA 90 bp | ATTAAGTTCTCCAGCTCATCAAAAGCACTTCCCAGTGTTGCTGCCTaGGGTTCAGGGGGCGCTGGCGCATTCTGGATGCCTTGGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKFSSSSKALPSVAA*GSGGAGAFWMPWEA Trigger: TGCTTCCCAAGGCATCCAGAATGCGCCAGCGCCCCCTGAACCTCAGGCAGCAACACTGGGAAGTGCTTTTGATGAGCTGGAGAACTTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 90 bp | AGCGAAGCAACATCGGAATGTTCCAAGCATGCTGAACAAATAGAATaGAGGAGTGGGGAGTTCTCCTTCAAGGTGGCCCGGGCCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SEATSECSKHAEQIE*RSGEFSFKVARAPA Trigger: TGCAGGGGCCCGGGCCACCTTGAAGGAGAACTCCCCACTCCTGCATTCTATTTGTTCAGCATGCTTGGAACATTCCGATGTTGCTTCGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATCAGGGCGCGGGCGGCTaGAACCACGGCCTCCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNQGAGG*NHGLPF Trigger: AAAAGGGAGGCCGTGGTTCAAGCCGCCCGCGCCCTG...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS GCA 90 bp | CCAGTGTTGCTGCCTGAGGTTCAGGGGGCGCTGGCGCATTCTGGATaGCTTGGGAAGCATTTGAAATTACATCAAGAGCGTTCTGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PVLLPEVQGALAHSG*LGKHLKLHQERSGS Trigger: AGATCCAGAACGCTCTTGATGTAATTTCAAATGCTTCCCAAGGCATCCAGAATGCGCCAGCGCCCCCTGAACCTCAGGCAGCAACACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | TTCATCCTCCACATGACTACTGGGTGCCGGGGTCCTGCAGAACTCTaGATGCGGATGATCTTGGTGGAGGCAATGTATGACATTTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FILHMTTGCRGPAEL*MRMILVEAMYDIFT Trigger: AGTGAAAATGTCATACATTGCCTCCACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTGCCTGGCGGATGGCATaGCACTCGGCGATAATCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGAWRMA*HSAIIR Trigger: GCGGATTATCGCCGAGTGCAATGCCATCCGCCAGGC...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS GCA 90 bp | GCAGTTGAGTCATCTTGGCCCGATCAGTTTTCCCTTCTGTCTGAATaGTGGTGTGGCTACGGACCTCATGGTCATCTTCAAGGTCAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVESSWPDQFSLLSE*WCGYGPHGHLQGQK Trigger: TTTCTGACCTTGAAGATGACCATGAGGTCCGTAGCCACACCAGCATTCAGACAGAAGGGAAAACTGATCGGGCCAAGATGACTCAACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGCGTCCTTTCTTCCTGTaGGAAGGATTCTGCGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: FPRARVTHFWQVRCKVRWRPFFL*EGFCGQ Trigger: TTGTCCGCAGAATCCTTCCAACAGGAAGAAAGGACG...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATTGGAACAAGCCAGATTaGCCACCTCCACGAGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNWNKPD*PPPRAC Trigger: GCAGGCTCGTGGAGGTGGCAAATCTGGCTTGTTCCA...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGATCTCAGCGTCCAGCTaGCTCTTCACCTTCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPRARVTHFWQVRCKVRWISASS*LFTFLK Trigger: CTTCAAGAAGGTGAAGAGCAAGCTGGACGCTGAGAT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS TCA 90 bp | CTTACTGGCTTTGAGCGAAGCAACATCGGAATGTTCCAAGCATGCTaGACAAATAGAATGCAGGAGTGGGGAGTTCTCCTTCAAGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTGFERSNIGMFQAC*TNRMQEWGVLLQGG Trigger: GCCACCTTGAAGGAGAACTCCCCACTCCTGCATTCTATTTGTTCAGCATGCTTGGAACATTCCGATGTTGCTTCGCTCAAAGCCAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 90 bp | ACTCTGGCTCTCTTTGAACGTCCTTTCTTCCTGTTGGAAGGATTCTaGGGACAATTCACCAGGGTAGTAACCTGGATTATCAGAGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLALFERPFFLLEGF*GQFTRVVTWIIRGS Trigger: GGAGCCTCTGATAATCCAGGTTACTACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | TTCCTGTTGGAAGGATTCTGCGGACAATTCACCAGGGTAGTAACCTaGATTATCAGAGGCTCCAGCAGTTTCTCCACAGTGAACGTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: FLLEGFCGQFTRVVT*IIRGSSSFSTVNVW Trigger: CCAAACGTTCACTGTGGAGAAACTGCTGGAGCCTCTGATAATCCAGGTTACTACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | CTCTCAGCTGATACCTTCAGAGCTTTGCTCTCTTTTCGAACTTCCTaGAGTGCAGCTGCCAGCTCTTCCTTTAAAACCGTGGCTTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSADTFRALLSFRTS*SAAASSSFKTVASL Trigger: TAAGGAAGCCACGGTTTTAAAGGAAGAGCTGGCAGCTGCACTCCAGGAAGTTCGAAAAGAGAGCAAAGCTCTGAAGGTATCAGCTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | GTTGAGTCATCTTGGCCCGATCAGTTTTCCCTTCTGTCTGAATGCTaGTGTGGCTACGGACCTCATGGTCATCTTCAAGGTCAGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VESSWPDQFSLLSEC*CGYGPHGHLQGQKH Trigger: ATGTTTCTGACCTTGAAGATGACCATGAGGTCCGTAGCCACACCAGCATTCAGACAGAAGGGAAAACTGATCGGGCCAAGATGACTCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGCTAACAAATTCCAAGTaGCTTCCTCCACGGAAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: FPRARVTHFWQVRCKVRWLTNSK*LPPRKL Trigger: TAGCTTCCGTGGAGGAAGCAACTTGGAATTTGTTAG...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGAGGTCTCTTGTCTTCTaGCTCATGTTGACAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPRARVTHFWQVRCKVRWRSLVF*LMLTMA Trigger: TGCCATTGTCAACATGAGCAAGAAGACAAGAGACCT...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGTGTTCCCATGTGCGCTaGTACATTTCCATGGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FPRARVTHFWQVRCKVRWCSHVR*YISMVF Trigger: AAACACCATGGAAATGTACAAGCGCACATGGGAACA...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTTCTGCCTCAGGCAGTaGAGTCATCTTGGCCCGATC | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGFCLRQ*SHLGPI Trigger: GATCGGGCCAAGATGACTCAACTGCCTGAGGCAGAA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS TCA 90 bp | GGATGTAGTGTTCCCATGTGCGCTTGTACATTTCCATGGTGTTTTTaGCCACTTGACTCTTGGGTCTTGATGCCAAAGCAAGTGCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCSVPMCACTFPWCF*PLDSWVLMPKQVQH Trigger: ATGCTGCACTTGCTTTGGCATCAAGACCCAAGAGTCAAGTGGTCAAAAACACCATGGAAATGTACAAGCGCACATGGGAACACTACATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | CTAACAAATTCCAAGTTGCTTCCTCCACGGAAGCTAGAAGAACTCTaGCTCTCTTTGAACGTCCTTTCTTCCTGTTGGAAGGATTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTNSKLLPPRKLEEL*LSLNVLSSCWKDSA Trigger: CGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTCTTCTAGCTTCCGTGGAGGAAGCAACTTGGAATTTGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 90 bp | TTCTGGATGCCTTGGGAAGCATTTGAAATTACATCAAGAGCGTTCTaGATCTCTTCACAGACGGTGTCCTTACTGGCTTTGAGCGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FWMPWEAFEITSRAF*ISSQTVSLLALSEA Trigger: TGCTTCGCTCAAAGCCAGTAAGGACACCGTCTGTGAAGAGATCCAGAACGCTCTTGATGTAATTTCAAATGCTTCCCAAGGCATCCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATCTCCACAGTGAACGTTaGGATCTGCAGATCCTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNLHSER*DLQILS Trigger: ACTCAGGATCTGCAGATCCAAACGTTCACTGTGGAG...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TTTCCCAGGGCTAGGGTGACACATTTTTGGCAGGTTAGATGCAAGGTTAGGTGGGCTATAATGCATTTGTaGACATCTTCCAGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPRARVTHFWQVRCKVRWAIMHL*TSSRMW Trigger: CCACATCCTGGAAGATGTCAACAAATGCATTATAGC...CCACCTAACCTTGCATCTAACCTGCCAAAAATGTGTCACCCTAGCCCTGGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS TCA 90 bp | CTAGGCGTTTCTCTAGTGATGGTCTTACATCTTCCTCTGTCACTGTaGGTGGGTTCAGGACAATTAAGTTCTCCAGCTCATCAAAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGVSLVMVLHLPLSL*VGSGQLSSPAHQKH Trigger: GTGCTTTTGATGAGCTGGAGAACTTAATTGTCCTGAACCCACTCACAGTGACAGAGGAAGATGTAAGACCATCACTAGAGAAACGCCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 90 bp | AGATGTCCACAAACTGATTATCATCAAGCGCAGTCAGAGAGTTCTTaGTTAAAGCATCTAGGGCCACATTCACTTGTGTCACGAACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: RCPQTDYHQAQSESS*LKHLGPHSLVSRTP Trigger: CGGAGTTCGTGACACAAGTGAATGTGGCCCTAGATGCTTTAAGCAAGAACTCTCTGACTGCGCTTGATGATAATCAGTTTGTGGACATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATGAACTCTGGCTCTCTTaGAACGTCCTTTCTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNELWLS*NVLSSC Trigger: ACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTC...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGCTTGACTCTTGGGTCTaGATGCCAAAGCAAGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WQVRCKVRWVKESMDANWLDSWV*MPKQVQ Trigger: CTGCACTTGCTTTGGCATCAAGACCCAAGAGTCAAG...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTGGATGCGGATGATCTaGGTGGAGGCAATGTATGAC | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGWMRMI*VEAMYD Trigger: GTCATACATTGCCTCCACCAAGATCATCCGCATCCA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTGGGTGGATCTTTTTCTaGGCAGAGCCTCTTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGGWIFF*AEPLLT Trigger: TGTCAGAAGAGGCTCTGCCAAGAAAAAGATCCACCC...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATCTCTGGAGGTCGGACTaGTTGGAAACATTTTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNLWRSD*LETFLR Trigger: TCTCAAAAATGTTTCCAACAAGTCCGACCTCCAGAG...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTTTCATCCCTCTGGCTaGGAGATTTTAGGTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGFHPSG*EILGPA Trigger: AGCAGGACCTAAAATCTCCAAGCCAGAGGGATGAAA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGCTTGAAGTCGGCGACTaGCTCAGCAATCTTTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: WQVRCKVRWVKESMDANWLEVGD*LSNLFL Trigger: AAGGAAAAGATTGCTGAGCAAGTCGCCGACTTCAAG...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGGCCAGCAAGTCCTGTTaGCACGGTGGATCTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: TKSPELLITIEIQGSSIMASKSC*HGGSGH Trigger: GTGTCCAGATCCACCGTGCAAACAGGACTTGCTGGC...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS TCA 90 bp | AAAGCAAGTGCAGCATTTATGATCTGTGGACACAGGGTCTCCAGGTaGTTGGCTGCAATTCTGACGATTTTAATCCCATCTTCATTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: KASAAFMICGHRVSR*LAAILTILIPSSFV Trigger: AACGAATGAAGATGGGATTAAAATCGTCAGAATTGCAGCCAATCACCTGGAGACCCTGTGTCCACAGATCATAAATGCTGCACTTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAGTCTTCTTGCTCATGTaGACAATGGCAGTATTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLVFLLM*TMAVFR Trigger: CCTGAATACTGCCATTGTCAACATGAGCAAGAAGAC...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | AACCCCACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTAGCAATCATCTCCCCCTaGTCTAACAAATTCCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NPTPTTNKNSLLQWVMTLAIISP*SNKFQV Trigger: AACTTGGAATTTGTTAGACAAGGGGGAGATGATTGC...TAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTGGGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTTGCCTTGGGAAGCATTaGAAATTACATCAAGAGCGT | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGCLGKH*KLHQER Trigger: ACGCTCTTGATGTAATTTCAAATGCTTCCCAAGGCA...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTGTGCTTGTAAGGAAGTaGACATTTCTCATCACACCT | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGVLVRK*TFLITP Trigger: AGGTGTGATGAGAAATGTCAACTTCCTTACAAGCAC...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | TGGCAGGTTAGATGCAAGGTTAGGTGGGTTAAAGAAAGTATGGATGCTAATTGGCAAGAACATCCATCCTaGATCCTGACTCTGATATCA | + |
|
Preference number: 5 (lower is better) Translates to: WQVRCKVRWVKESMDANWQEHPS*ILTLIS Trigger: TGATATCAGAGTCAGGATCAAGGATGGATGTTCTTG...CCAATTAGCATCCATACTTTCTTTAACCCACCTAACCTTGCATCTAACCTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | GCATTATGTTCCAAGATGGCAGCCTACAGAGGGTCATCAAAGCACTTCTTGAATGAATTCACTCATGACTaGAACTGGGTGGATCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALCSKMAAYRGSSKHFLNEFTHD*NWVDLF Trigger: AAAAAGATCCACCCAGTTCAAGTCATGAGTGAATTC...ATTCAAGAAGTGCTTTGATGACCCTCTGTAGGCTGCCATCTTGGAACATAATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGGTGTCCTTACTGGCTTaGAGCGAAGCAACATCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TKSPELLITIEIQGSSIMVSLLA*SEATSE Trigger: TTCCGATGTTGCTTCGCTCAAAGCCAGTAAGGACAC...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | CACACCAACAACAAACAAAAATTCACTTCTCCAGTGGGTGATGACTCTACAGGTAGAACAATGATGTCATaGCTTGTGTCATCCCATATC | + |
|
Preference number: 5 (lower is better) Translates to: HTNNKQKFTSPVGDDSTGRTMMS*LVSSHI Trigger: GATATGGGATGACACAAGCAATGACATCATTGTTCT...ACCTGTAGAGTCATCACCCACTGGAGAAGTGAATTTTTGTTTGTTGTTGGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGTGGAGGTCGGACTTGTaGGAAACATTTTTGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TKSPELLITIEIQGSSIMWRSDL*ETFLRD Trigger: GTCTCTCAAAAATGTTTCCAACAAGTCCGACCTCCA...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAGAGTCCAGAACTTCTGATCACTATAGAAATACAAGGTTCAAGCATTATGTCCCATCTTCATTCGTaGACATGGAACAAGCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TKSPELLITIEIQGSSIMSHLHS*TWNKPD Trigger: ATCTGGCTTGTTCCATGTCAACGAATGAAGATGGGA...CATAATGCTTGAACCTTGTATTTCTATAGTGATCAGAAGTTCTGGACTCTTAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105440.8 |
||
| CDS CAA 72 bp | GAGTCTTGTAACTGCTGCCAACAGGGCGCGGGCGGCTaGAACCACGGCCTCCCTTTTCGGGAGGTAACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESCNCCQQGAGG*NHGLPFREVTG Trigger: CCCTGTTACCTCCCGAAAAGGGAGGCCGTGGTTCAAGCCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 72 bp | ACTATCCATTTCACCCGCAACGATGTGAGCTACTCTTaGGGCCCGTCCTCTGATGGCACCGGCAGCTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TIHFTRNDVSYS*GPSSDGTGSSV Trigger: GACCGAGCTGCCGGTGCCATCAGAGGACGGGCCGCAAGAGTAGCTCACATCGTTGCGGGTGAAATGGATAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CAA 90 bp | AAGAACAAGGAGTCTTGTAACTGCTGCCAACAGGGCGCGGGCGGCTaGAACCACGGCCTCCCTTTTCGGGAGGTAACAGGGGTCGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KNKESCNCCQQGAGG*NHGLPFREVTGVVC Trigger: ACAGACGACCCCTGTTACCTCCCGAAAAGGGAGGCCGTGGTTCAAGCCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTCCTTGTTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS TCA 72 bp | TCCAGCTCATCAAAAGCACTTCCCAGTGTTGCTGCCTaGGGTTCAGGGGGCGCTGGCGCATTCTGGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSKALPSVAA*GSGGAGAFWMP Trigger: AGGCATCCAGAATGCGCCAGCGCCCCCTGAACCTCAGGCAGCAACACTGGGAAGTGCTTTTGATGAGCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 72 bp | AATCATGTCGGCAAGAACAAGGAGTCTTGTAACTGCTaGCAACAGGGCGCGGGCGGCTTGAACCACGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NHVGKNKESCNC*QQGAGGLNHGL Trigger: GAGGCCGTGGTTCAAGCCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTCCTTGTTCTTGCCGACATGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 72 bp | CTTCATCCTCCACATGACTACTGGGTGCCGGGGTCCTaGAGAACTCTGGATGCGGATGATCTTGGTGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LHPPHDYWVPGS*RTLDADDLGGG Trigger: GCCTCCACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 72 bp | TTAGCCGGAGCCTTCATCCTCCACATGACTACTGGGTaGCGGGGTCCTGCAGAACTCTGGATGCGGATGATC | + |
|
Preference number: 6 (lower is better) Translates to: LAGAFILHMTTG*RGPAELWMRMI Trigger: GATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAAGGCTCCGGCTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 72 bp | CTTCTTAGCCGGAGCCTTCATCCTCCACATGACTACTaGGTGCCGGGGTCCTGCAGAACTCTGGATGCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLSRSLHPPHDY*VPGSCRTLDAD Trigger: ATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTGGAGGATGAAGGCTCCGGCTAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS TCA 72 bp | CCGCAACGATGTGAGCTACTCTTGCGGCCCGTCCTCTaGTGGCACCGGCAGCTCGGTCTAAATTATCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PQRCELLLRPVL*WHRQLGLNYQH Trigger: ATGCTGATAATTTAGACCGAGCTGCCGGTGCCATCAGAGGACGGGCCGCAAGAGTAGCTCACATCGTTGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS GCA 72 bp | ATCAATCATGTCGGCAAGAACAAGGAGTCTTGTAACTaGTGCCAACAGGGCGCGGGCGGCTTGAACCACGGC | + |
|
Preference number: 6 (lower is better) Translates to: INHVGKNKESCN*CQQGAGGLNHG Trigger: GCCGTGGTTCAAGCCGCCCGCGCCCTGTTGGCAGCAGTTACAAGACTCCTTGTTCTTGCCGACATGATTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
||
| CDS CCA 72 bp | CACATGACTACTGGGTGCCGGGGTCCTGCAGAACTCTaGATGCGGATGATCTTGGTGGAGGCAATGTATGAC | + |
|
Preference number: 6 (lower is better) Translates to: HMTTGCRGPAEL*MRMILVEAMYD Trigger: GTCATACATTGCCTCCACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGTCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | CTGGGTGCCGGGGTCCTGCAGAACTCTGGATGCGGATaGTCTTGGTGGAGGCAATGTATGACATTTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: LGAGVLQNSGCG*SWWRQCMTFSL Trigger: CAGTGAAAATGTCATACATTGCCTCCACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CCA 72 bp | CTGTTCCAGGTAAGCCAGCAAGTCCTGTTTGCACGGTaGATCTGGACACTGGTTAGCAATCTGCCGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: LFQVSQQVLFAR*IWTLVSNLPSK Trigger: CTTGCTCGGCAGATTGCTAACCAGTGTCCAGATCCACCGTGCAAACAGGACTTGCTGGCTTACCTGGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | CCCTCTGGCTTGGAGATTTTAGGTCCTGCTGGCGTTTaGAGGCCAAATAATCCAGGCTTTCCAGCTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: PSGLEILGPAGV*RPNNPGFPAPS Trigger: GGAAGGAGCTGGAAAGCCTGGATTATTTGGCCTTCAAACGCCAGCAGGACCTAAAATCTCCAAGCCAGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 90 bp | ACTACTGGGTGCCGGGGTCCTGCAGAACTCTGGATGCGGATGATCTaGGTGGAGGCAATGTATGACATTTTCACTGTTTGCACTACAGCA | + |
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Preference number: 6 (lower is better) Translates to: TTGCRGPAELWMRMI*VEAMYDIFTVCTTA Trigger: TGCTGTAGTGCAAACAGTGAAAATGTCATACATTGCCTCCACCAAGATCATCCGCATCCAGAGTTCTGCAGGACCCCGGCACCCAGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CCA 72 bp | TCTTGGCCCGATCAGTTTTCCCTTCTGTCTGAATGCTaGTGTGGCTACGGACCTCATGGTCATCTTCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SWPDQFSLLSEC*CGYGPHGHLQG Trigger: ACCTTGAAGATGACCATGAGGTCCGTAGCCACACCAGCATTCAGACAGAAGGGAAAACTGATCGGGCCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 72 bp | TCCCATCTTCATTCGTTGACATGGAACAAGCCAGATTaGCCACCTCCACGAGCCTGCCAGTGTGCTCATGAA | + |
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Preference number: 6 (lower is better) Translates to: SHLHSLTWNKPD*PPPRACQCAHE Trigger: TTCATGAGCACACTGGCAGGCTCGTGGAGGTGGCAAATCTGGCTTGTTCCATGTCAACGAATGAAGATGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | GGGCGCTGGCGCATTCTGGATGCCTTGGGAAGCATTTaGAATTACATCAAGAGCGTTCTGGATCTCTTCACA | + |
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Preference number: 6 (lower is better) Translates to: GRWRILDALGSI*NYIKSVLDLFT Trigger: TGTGAAGAGATCCAGAACGCTCTTGATGTAATTTCAAATGCTTCCCAAGGCATCCAGAATGCGCCAGCGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 72 bp | TCATCTTGGCCCGATCAGTTTTCCCTTCTGTCTGAATaGTGGTGTGGCTACGGACCTCATGGTCATCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: SSWPDQFSLLSE*WCGYGPHGHLQ Trigger: TTGAAGATGACCATGAGGTCCGTAGCCACACCAGCATTCAGACAGAAGGGAAAACTGATCGGGCCAAGATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 72 bp | TGTTTGCACGGTGGATCTGGACACTGGTTAGCAATCTaGCGAGCAAGAACATCCATCCTTGATCCTGACTCT | + |
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Preference number: 6 (lower is better) Translates to: CLHGGSGHWLAI*RARTSILDPDS Trigger: AGAGTCAGGATCAAGGATGGATGTTCTTGCTCGGCAGATTGCTAACCAGTGTCCAGATCCACCGTGCAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CCA 72 bp | GAAGGATTCTGCGGACAATTCACCAGGGTAGTAACCTaGATTATCAGAGGCTCCAGCAGTTTCTCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: EGFCGQFTRVVT*IIRGSSSFSTV Trigger: CACTGTGGAGAAACTGCTGGAGCCTCTGATAATCCAGGTTACTACCCTGGTGAATTGTCCGCAGAATCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 72 bp | CTTCCTCCACGGAAGCTAGAAGAACTCTGGCTCTCTTaGAACGTCCTTTCTTCCTGTTGGAAGGATTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: LPPRKLEELWLS*NVLSSCWKDSA Trigger: CGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTCTTCTAGCTTCCGTGGAGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | CCTGGATTATCAGAGGCTCCAGCAGTTTCTCCACAGTaGACGTTTGGATCTGCAGATCCTGAGTGTCCATAT | + |
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Preference number: 6 (lower is better) Translates to: PGLSEAPAVSPQ*TFGSADPECPY Trigger: ATATGGACACTCAGGATCTGCAGATCCAAACGTTCACTGTGGAGAAACTGCTGGAGCCTCTGATAATCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CCA 72 bp | TCCAAGTTGCTTCCTCCACGGAAGCTAGAAGAACTCTaGCTCTCTTTGAACGTCCTTTCTTCCTGTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SKLLPPRKLEEL*LSLNVLSSCWK Trigger: CTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTCTTCTAGCTTCCGTGGAGGAAGCAACTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 72 bp | TATCAGAGGCTCCAGCAGTTTCTCCACAGTGAACGTTaGGATCTGCAGATCCTGAGTGTCCATATTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: YQRLQQFLHSER*DLQILSVHIQG Trigger: ACCCTGAATATGGACACTCAGGATCTGCAGATCCAAACGTTCACTGTGGAGAAACTGCTGGAGCCTCTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 90 bp | AACCTGGATTATCAGAGGCTCCAGCAGTTTCTCCACAGTGAACGTTaGGATCTGCAGATCCTGAGTGTCCATATTCAGGGTTATTGGCGT | + |
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Preference number: 6 (lower is better) Translates to: NLDYQRLQQFLHSER*DLQILSVHIQGYWR Trigger: ACGCCAATAACCCTGAATATGGACACTCAGGATCTGCAGATCCAAACGTTCACTGTGGAGAAACTGCTGGAGCCTCTGATAATCCAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 90 bp | TCCAAGTTGCTTCCTCCACGGAAGCTAGAAGAACTCTGGCTCTCTTaGAACGTCCTTTCTTCCTGTTGGAAGGATTCTGCGGACAATTCA | + |
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Preference number: 6 (lower is better) Translates to: SKLLPPRKLEELWLS*NVLSSCWKDSADNS Trigger: TGAATTGTCCGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTCTTCTAGCTTCCGTGGAGGAAGCAACTTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 90 bp | GAAGCTAGAAGAACTCTGGCTCTCTTTGAACGTCCTTTCTTCCTGTaGGAAGGATTCTGCGGACAATTCACCAGGGTAGTAACCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: EARRTLALFERPFFL*EGFCGQFTRVVTWI Trigger: AATCCAGGTTACTACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTCTTCTAGCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 90 bp | TCAAGAGCGTTCTGGATCTCTTCACAGACGGTGTCCTTACTGGCTTaGAGCGAAGCAACATCGGAATGTTCCAAGCATGCTGAACAAATA | + |
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Preference number: 6 (lower is better) Translates to: SRAFWISSQTVSLLA*SEATSECSKHAEQI Trigger: TATTTGTTCAGCATGCTTGGAACATTCCGATGTTGCTTCGCTCAAAGCCAGTAAGGACACCGTCTGTGAAGAGATCCAGAACGCTCTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | AGTTTCTCCACAGTGAACGTTTGGATCTGCAGATCCTaGGTGTCCATATTCAGGGTTATTGGCGTTTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SFSTVNVWICRS*VSIFRVIGVSA Trigger: GGCAGAAACGCCAATAACCCTGAATATGGACACTCAGGATCTGCAGATCCAAACGTTCACTGTGGAGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 72 bp | AGAACTCTGGCTCTCTTTGAACGTCCTTTCTTCCTGTaGGAAGGATTCTGCGGACAATTCACCAGGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: RTLALFERPFFL*EGFCGQFTRVV Trigger: TACTACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAGAGCCAGAGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 90 bp | AGCTCTTCCTTTAAAACCGTGGCTTCCTTAGCAATCATCTCCCCCTaGTCTAACAAATTCCAAGTTGCTTCCTCCACGGAAGCTAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: SSSFKTVASLAIISP*SNKFQVASSTEARR Trigger: TCTTCTAGCTTCCGTGGAGGAAGCAACTTGGAATTTGTTAGACAAGGGGGAGATGATTGCTAAGGAAGCCACGGTTTTAAAGGAAGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | GCAGCATTTATGATCTGTGGACACAGGGTCTCCAGGTaGTTGGCTGCAATTCTGACGATTTTAATCCCATCT | + |
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Preference number: 6 (lower is better) Translates to: AAFMICGHRVSR*LAAILTILIPS Trigger: AGATGGGATTAAAATCGTCAGAATTGCAGCCAATCACCTGGAGACCCTGTGTCCACAGATCATAAATGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | GTTCCCATGTGCGCTTGTACATTTCCATGGTGTTTTTaGCCACTTGACTCTTGGGTCTTGATGCCAAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VPMCACTFPWCF*PLDSWVLMPKQ Trigger: TTGCTTTGGCATCAAGACCCAAGAGTCAAGTGGTCAAAAACACCATGGAAATGTACAAGCGCACATGGGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 72 bp | CTCTTTGAACGTCCTTTCTTCCTGTTGGAAGGATTCTaGGGACAATTCACCAGGGTAGTAACCTGGATTATC | + |
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Preference number: 6 (lower is better) Translates to: LFERPFFLLEGF*GQFTRVVTWII Trigger: GATAATCCAGGTTACTACCCTGGTGAATTGTCCGCAGAATCCTTCCAACAGGAAGAAAGGACGTTCAAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CCA 72 bp | CCTTGGGAAGCATTTGAAATTACATCAAGAGCGTTCTaGATCTCTTCACAGACGGTGTCCTTACTGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: PWEAFEITSRAF*ISSQTVSLLAL Trigger: CAAAGCCAGTAAGGACACCGTCTGTGAAGAGATCCAGAACGCTCTTGATGTAATTTCAAATGCTTCCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 72 bp | AGCTGTCTGCGGAGGTCTCTTGTCTTCTTGCTCATGTaGACAATGGCAGTATTCAGGGTATTACTCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: SCLRRSLVFLLM*TMAVFRVLLLS Trigger: AGAAAGGAGTAATACCCTGAATACTGCCATTGTCAACATGAGCAAGAAGACAAGAGACCTCCGCAGACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | TGCAATTCTGACGATTTTAATCCCATCTTCATTCGTTaGCATGGAACAAGCCAGATTTGCCACCTCCACGAG | + |
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Preference number: 6 (lower is better) Translates to: CNSDDFNPIFIR*HGTSQICHLHE Trigger: CTCGTGGAGGTGGCAAATCTGGCTTGTTCCATGTCAACGAATGAAGATGGGATTAAAATCGTCAGAATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 72 bp | AGAGACTCGAATGTTCTTTGGAAAGATGACACATGCTaGAAGAGGCACATGACATCAATCATGTCGGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: RDSNVLWKDDTC*KRHMTSIMSAR Trigger: TCTTGCCGACATGATTGATGTCATGTGCCTCTTGCAGCATGTGTCATCTTTCCAAAGAACATTCGAGTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 72 bp | TATGATCTGTGGACACAGGGTCTCCAGGTGATTGGCTaGAATTCTGACGATTTTAATCCCATCTTCATTCGT | + |
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Preference number: 6 (lower is better) Translates to: YDLWTQGLQVIG*NSDDFNPIFIR Trigger: ACGAATGAAGATGGGATTAAAATCGTCAGAATTGCAGCCAATCACCTGGAGACCCTGTGTCCACAGATCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS CAA 72 bp | TTTAAAACCGTGGCTTCCTTAGCAATCATCTCCCCCTaGTCTAACAAATTCCAAGTTGCTTCCTCCACGGAA | + |
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Preference number: 6 (lower is better) Translates to: FKTVASLAIISP*SNKFQVASSTE Trigger: TTCCGTGGAGGAAGCAACTTGGAATTTGTTAGACAAGGGGGAGATGATTGCTAAGGAAGCCACGGTTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS GCA 72 bp | CAAACTGATTATCATCAAGCGCAGTCAGAGAGTTCTTaGTTAAAGCATCTAGGGCCACATTCACTTGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QTDYHQAQSESS*LKHLGPHSLVS Trigger: TGACACAAGTGAATGTGGCCCTAGATGCTTTAAGCAAGAACTCTCTGACTGCGCTTGATGATAATCAGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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| CDS TCA 72 bp | AGGTTCTCTGGAGGTCGGACTTGTTGGAAACATTTTTaGGAGACTCGAATGTTCTTTGGAAAGATGACACAT | + |
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Preference number: 6 (lower is better) Translates to: RFSGGRTCWKHF*ETRMFFGKMTH Trigger: ATGTGTCATCTTTCCAAAGAACATTCGAGTCTCTCAAAAATGTTTCCAACAAGTCCGACCTCCAGAGAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000075099.5 ENSMUST00000105440.8 ENSMUST00000105441.8 |
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