Pregenerated sensors for CTNNA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037815Ensembl transcript IDs: ENSMUST00000042345.8, ENSMUST00000237855.2
Found 98 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGTTGTTGAGAGCGTATGCCAGCTCTCCGCCACTGCCACCCTGGTaGTGGGCAGCATCATCTGATGCAGTAGCCTGGGCTGCATTAGAA | + |
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Preference number: 1 (lower is better) Translates to: KLLRAYASSPPLPPW*WAASSDAVAWAALE Trigger: TTCTAATGCAGCCCAGGCTACTGCATCAGATGATGCTGCCCAGCACCAGGGTGGCAGTGGCGGAGAGCTGGCATACGCTCTCAACAACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR CCA 90 bp | TCAAAGTTGTTGAGAGCGTATGCCAGCTCTCCGCCACTGCCACCCTaGTGCTGGGCAGCATCATCTGATGCAGTAGCCTGGGCTGCATTA | + |
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Preference number: 1 (lower is better) Translates to: SKLLRAYASSPPLPP*CWAASSDAVAWAAL Trigger: TAATGCAGCCCAGGCTACTGCATCAGATGATGCTGCCCAGCACCAGGGTGGCAGTGGCGGAGAGCTGGCATACGCTCTCAACAACTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR GCA 90 bp | TCTAAGTATTGCCTAAGCAAACCCTATGCAGTCATCAGGCTTCTTTaGTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: SKYCLSKPYAVIRLL*WPKAGNTATIRNEP Trigger: GGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCTTAGGCAATACTTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR CCA 90 bp | TTATATTTTATTGTCTCCTATAGTTTATTCCTCAGAAGAGGTTTCTaGTACCTTCCTTCTCCAGACCGTCTAAGGTGCCCTGTGATTTAC | + |
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Preference number: 1 (lower is better) Translates to: LYFIVSYSLFLRRGF*YLPSPDRLRCPVIY Trigger: GTAAATCACAGGGCACCTTAGACGGTCTGGAGAAGGAAGGTACCAGAAACCTCTTCTGAGGAATAAACTATAGGAGACAATAAAATATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCCTGGGCAGCATCATCTaGTGCAGTAGCCTGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIILGSII*CSSLGC Trigger: GCAGCCCAGGCTACTGCATCAGATGATGCTGCCCAG...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCCTGCCCGGACCATGTTaGCTCGCTTCACAGAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIILPGPC*LASQKS Trigger: GCTCTTCTGTGAAGCGAGGCAACATGGTCCGGGCAG...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCCCACTGCCACCCTGGTaGTGGGCAGCATCATCTGAT | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIPLPPW*WAASSD Trigger: ATCAGATGATGCTGCCCAGCACCAGGGTGGCAGTGG...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCACAGCTGCTTCCACCTaGTCAGTGAAGCGCGGCATG | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIITAAST*SVKRGM Trigger: CATGCCGCGCTTCACTGAGCAGGTGGAAGCAGCTGT...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCGACAGCATTACACTCTaGCACAATGCGCTCCCGACG | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIDSITL*HNALPT Trigger: CGTCGGGAGCGCATTGTGGCAGAGTGTAATGCTGTC...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR GCA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGACTCTGCGGCTTTGCTaGCAACGCCAATGCAGCATT | + |
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Preference number: 2 (lower is better) Translates to: TSKSSVSKSESSNSSGVLTLRLC*QRQCSI Trigger: AATGCTGCATTGGCGTTGGCAGCAAAGCCGCAGAGT...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CCA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGAGGTCCTGTAGAGCCTaGCGGACAGCATTACACTCT | + |
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Preference number: 2 (lower is better) Translates to: TSKSSVSKSESSNSSGVLRSCRA*RTALHS Trigger: AGAGTGTAATGCTGTCCGCCAGGCTCTACAGGACCT...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCTTCATTGTTGGAGATTaGACAGGCCAGGTTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIFIVGD*TGQVGN Trigger: GTTGCCAACCTGGCCTGTTCAATCTCCAACAATGAA...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACACACTGGGCCACCCTTaGTCATTTAATTCCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: TLCSHQASLLAQSRKHCDTLGHP*SFNSIC Trigger: GCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGT...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCGTTTATCAAAGTTGTTaGGAGCGTATGCCAGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIVYQSC*ERMPAL Trigger: GAGAGCTGGCATACGCTCTCAACAACTTTGATAAAC...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCCATCAACAGCATCTGTaGGAACACGGACTTGCTTTT | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIHQQHL*EHGLAF Trigger: AAAAGCAAGTCCGTGTTCTCACAGATGCTGTTGATG...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCTCTGATGCAGTAGCCTaGGCTGCATTAGAAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIISDAVA*AALEIP Trigger: AGGAATTTCTAATGCAGCCCAGGCTACTGCATCAGA...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACCTTAGCAAATACATTTaGGTGAAGCATGTGACTGGT | + |
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Preference number: 2 (lower is better) Translates to: TLCSHQASLLAQSRKHCDLSKYI*VKHVTG Trigger: ACCAGTCACATGCTTCACTCAAATGTATTTGCTAAG...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTCAGGGAAGCATGTTCTaGTTACAGCATCACAACACA | + |
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Preference number: 2 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTQGSMF*LQHHNT Trigger: TGTGTTGTGATGCTGTAATCAGAACATGCTTCCCTG...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR-3UTR TCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCGTCTTTTTGCTGCCATaGTGTTCAGCTTATCTACTT | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIVFLLP*CSAYLL Trigger: AAGTAGATAAGCTGAACATCATGGCAGCAAAAAGAC...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR TCA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGTATCTATTGCAGAGTTaGGTGCATCACTTCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: TSKSSVSKSESSNSSGVLYLLQS*VHHFFL Trigger: AAGAAAGAAGTGATGCACTCAACTCTGCAATAGATA...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCCCTCAATCAGTTTGTTaGCATGTTCACGAAAAACTT | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIIPQSVC*HVHEKL Trigger: AAGTTTTTCGTGAACATGCCAACAAACTGATTGAGG...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCTGTTCACGAAAAACTTaGGCATATTCCTTAACTTCT | + |
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Preference number: 2 (lower is better) Translates to: KSSVSKSESSNSSGVLIICSRKT*AYSLTS Trigger: AGAAGTTAAGGAATATGCCCAAGTTTTTCGTGAACA...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCTCTGCTACCTCCCTGTaGAATAAGACAGTGTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: KQETLRRLEMSPMVNLHFSATSL*NKTVFS Trigger: AGAGAACACTGTCTTATTCCACAGGGAGGTAGCAGA...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR-3UTR CCA 90 bp | TGTTCAGCTTATCTACTTCTGGTTTCAGAGCTTTGTACTGTATCCCTAAGTCTTCTTCACAGAAGAGCATaGATCATCTGCAAACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: CSAYLLLVSELCTVSLSLLHRRA*IICKLP Trigger: GGGGAGTTTGCAGATGATCCATGCTCTTCTGTGAAG...AAGACTTAGGGATACAGTACAAAGCTCTGAAACCAGAAGTAGATAAGCTGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR GCA 72 bp | GATGCGCTGAAGGTAGGCCAGCAGGTCCTGCTTGCATaGCGAGTCTGGGCAATGGTCTGCGATGGTCCGGCC | + |
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Preference number: 3 (lower is better) Translates to: DALKVGQQVLLA*RVWAMVCDGPA Trigger: GGCCGGACCATCGCAGACCATTGCCCAGACTCGGCATGCAAGCAGGACCTGCTGGCCTACCTTCAGCGCATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR GCA 72 bp | AGAGCGTATGCCAGCTCTCCGCCACTGCCACCCTGGTaGTGGGCAGCATCATCTGATGCAGTAGCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: RAYASSPPLPPW*WAASSDAVAWA Trigger: AGCCCAGGCTACTGCATCAGATGATGCTGCCCAGCACCAGGGTGGCAGTGGCGGAGAGCTGGCATACGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR CCA 72 bp | AAGGTAGGCCAGCAGGTCCTGCTTGCATGCCGAGTCTaGGCAATGGTCTGCGATGGTCCGGCCGAGCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: KVGQQVLLACRV*AMVCDGPAELV Trigger: GACAAGCTCGGCCGGACCATCGCAGACCATTGCCCAGACTCGGCATGCAAGCAGGACCTGCTGGCCTACCTT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | CACTCTGCCACAATGCGCTCCCGACGGTCATCACGTGTGCAGGATGAGTCAGCCGCTGCCCGGACCATGTaGCCTCGCTTCACAGAAGAG | + |
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Preference number: 3 (lower is better) Translates to: HSATMRSRRSSRVQDESAAARTM*PRFTEE Trigger: CTCTTCTGTGAAGCGAGGCAACATGGTCCGGGCAGC...GGCTGACTCATCCTGCACACGTGATGACCGTCGGGAGCGCATTGTGGCAGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGCGCGGCATGACTGTGTaGGAGAGGAGCTTGGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: TSKSSVSKSESSNSSGVLRGMTV*ERSLVA Trigger: AGCCACCAAGCTCCTCTCCAACACAGTCATGCCGCG...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATTGAACAGGCCAGGTaGGCAACCTCAATCAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: TSKSSVSKSESSNSSGVLIEQAR*ATSISL Trigger: CAAACTGATTGAGGTTGCCAACCTGGCCTGTTCAAT...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGCTTCATTGTTGGAGATaGAACAGGCCAGGTTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: TSKSSVSKSESSNSSGVLLHCWR*NRPGWQ Trigger: TTGCCAACCTGGCCTGTTCAATCTCCAACAATGAAG...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR GCA 72 bp | TGCCTAAGCAAACCCTATGCAGTCATCAGGCTTCTTTaGTGGCCCAAAGCAGGAAACACTGCGACGATTAGA | + |
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Preference number: 3 (lower is better) Translates to: CLSKPYAVIRLL*WPKAGNTATIR Trigger: TCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCTTAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| 3UTR-3UTR CAA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGTCTGGTTTCAGAGCTTaGTACTGTATCCCTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: TSKSSVSKSESSNSSGVLSGFRA*YCIPKS Trigger: AGACTTAGGGATACAGTACAAAGCTCTGAAACCAGA...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCATGCAGTATAGAGGATaGGAACATTTTTCTGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: KSSVSKSESSNSSGVLIIMQYRG*EHFSAG Trigger: TCCTGCAGAAAAATGTTCCAATCCTCTATACTGCAT...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCACCTCAATCAGTTTGTaGGCATGTTCACGAAAAACT | + |
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Preference number: 3 (lower is better) Translates to: KSSVSKSESSNSSGVLIITSISL*ACSRKT Trigger: AGTTTTTCGTGAACATGCCAACAAACTGATTGAGGT...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCTTATCTATTGCAGAGTaGAGTGCATCACTTCTTTCT | + |
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Preference number: 3 (lower is better) Translates to: KSSVSKSESSNSSGVLIILSIAE*SASLLS Trigger: AGAAAGAAGTGATGCACTCAACTCTGCAATAGATAA...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCAAAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATGTTCACGAAAAACTaGGGCATATTCCTTAACTTC | + |
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Preference number: 3 (lower is better) Translates to: TSKSSVSKSESSNSSGVLMFTKN*GIFLNF Trigger: GAAGTTAAGGAATATGCCCAAGTTTTTCGTGAACAT...CAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTTTGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
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| CDS-3UTR TCA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACGAGGAAGCTGAGCCATaGTCGCCCGGGCGCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GHPWSFNSICPTVGLKSNEEAEP*SPGRSG Trigger: GCCAGAGCGCCCGGGCGATCATGGCTCAGCTTCCTC...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR TCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACTCTGAGGTGACTACATaGATGACTCGGGCTGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: TLCSHQASLLAQSRKHCDSEVTT*MTRAAR Trigger: CCGGGCAGCCCGAGTCATTCATGTAGTCACCTCAGA...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR TCA 90 bp | CTCAGGCGCTCACCCCTACCTAGAAAGCAGGCACTTCAGCCTACTCAGAAATGTTGCTGTCCATGGCTTTaGACTCGCTCAGGGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LRRSPLPRKQALQPTQKCCCPWL*TRSGPA Trigger: TGCAGGCCCTGAGCGAGTTCAAAGCCATGGACAGCA...ACATTTCTGAGTAGGCTGAAGTGCCTGCTTTCTAGGTAGGGGTGAGCGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR TCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGCTGGGCAGCATCATCTaGTGCAGTAGCCTGGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQALGSII*CSSLGC Trigger: GCAGCCCAGGCTACTGCATCAGATGATGCTGCCCAG...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR GCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGACAGCATTACACTCTaGCACAATGCGCTCCCGACG | + |
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Preference number: 4 (lower is better) Translates to: TLCSHQASLLAQSRKHCDDSITL*HNALPT Trigger: CGTCGGGAGCGCATTGTGGCAGAGTGTAATGCTGTC...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR TCA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGACTCCTCGGGGGTCCTaGTCATCAGCACTGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: FFAGPKQETLRRLEMSPMTPRGS*SSALLS Trigger: GGAAAGCAGTGCTGATGATCAGGACCCCCGAGGAGT...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR GCA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTCCACTGCCACCCTGGTaGTGGGCAGCATCATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTPLPPW*WAASSD Trigger: ATCAGATGATGCTGCCCAGCACCAGGGTGGCAGTGG...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR GCA 90 bp | CTCAGGCGCTCACCCCTACCTAGAAAGCAGGCACTTCAGCCTACTCAGAAATGTGACGGTCATCACGTGTaGAGGATGAGTCAGCCATCA | + |
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Preference number: 4 (lower is better) Translates to: LRRSPLPRKQALQPTQKCDGHHV*RMSQPS Trigger: TGATGGCTGACTCATCCTGCACACGTGATGACCGTC...ACATTTCTGAGTAGGCTGAAGTGCCTGCTTTCTAGGTAGGGGTGAGCGCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR GCA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGACAGCTGCTTCCACCTaGTCAGTGAAGCGCGGCATG | + |
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Preference number: 4 (lower is better) Translates to: FFAGPKQETLRRLEMSPMTAAST*SVKRGM Trigger: CATGCCGCGCTTCACTGAGCAGGTGGAAGCAGCTGT...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR GCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGCCAGCAGGTCCTGCTTaGATGCCGAGTCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQAPAGPA*MPSLGN Trigger: ATTGCCCAGACTCGGCATGCAAGCAGGACCTGCTGG...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGCTGCCACCCTGGTGCTaGGCAGCATCATCTGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQALPPWC*AASSDA Trigger: TGCATCAGATGATGCTGCCCAGCACCAGGGTGGCAG...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTACTGCCCGGACCATGTTaGCTCGCTTCACAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLGHPWSFNSICPTVGLLPGPC*LASQKS Trigger: GCTCTTCTGTGAAGCGAGGCAACATGGTCCGGGCAG...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCAGGTCCTGCTTGCATaGCGAGTCTGGGCAATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHPWSFNSICPTVGLKSNQVLLA*RVWAMV Trigger: GACCATTGCCCAGACTCGGCATGCAAGCAGGACCTG...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCCCGCCACTGCCACCCTaGTGCTGGGCAGCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KQETLRRLEMSPMVNLHFPPLPP*CWAASS Trigger: AGATGATGCTGCCCAGCACCAGGGTGGCAGTGGCGG...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACTGGTCATCTTCTGTCTaGACACTGGTCCTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCSHQASLLAQSRKHCDWSSSV*TLVLLL Trigger: CAGAAGCAGGACCAGTGTCCAGACAGAAGATGACCA...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGTGACTTCTGGTATTTaGTGGAAGCCACGTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: TLCSHQASLLAQSRKHCDVTSGI*WKPRRT Trigger: CGTCCTACGTGGCTTCCACCAAATACCAGAAGTCAC...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCGCTCACCCCTACCTAGAAAGCAGGCACTTCAGCCTACTCAGAAATGTTTCATTGTTGGAGATTaGACAGGCCAGGTTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRSPLPRKQALQPTQKCFIVGD*TGQVGN Trigger: GTTGCCAACCTGGCCTGTTCAATCTCCAACAATGAA...ACATTTCTGAGTAGGCTGAAGTGCCTGCTTTCTAGGTAGGGGTGAGCGCCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACGACCTTTGCCTCGGGTaGAGTCGGTCATCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GHPWSFNSICPTVGLKSNDLCLG*SRSSPS Trigger: TGATGGAGATGACCGACTTCACCCGAGGCAAAGGTC...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACAACTCGCTCAGGGCCTaGACTGGGTTCACGTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHPWSFNSICPTVGLKSNNSLRA*TGFTCF Trigger: GAAACACGTGAACCCAGTGCAGGCCCTGAGCGAGTT...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACCTTCACAGAAGAGCATaGATCATCTGCAAACTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLCSHQASLLAQSRKHCDLHRRA*IICKLP Trigger: GGGGAGTTTGCAGATGATCCATGCTCTTCTGTGAAG...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGAGGTCCTGTAGAGCCTaGCGGACAGCATTACACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FFAGPKQETLRRLEMSPMRSCRA*RTALHS Trigger: AGAGTGTAATGCTGTCCGCCAGGCTCTACAGGACCT...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGGCGCTCACCCCTACCTAGAAAGCAGGCACTTCAGCCTACTCAGAAATGTCATCAACAGCATCTGTaGGAACACGGACTTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRSPLPRKQALQPTQKCHQQHL*EHGLAF Trigger: AAAAGCAAGTCCGTGTTCTCACAGATGCTGTTGATG...ACATTTCTGAGTAGGCTGAAGTGCCTGCTTTCTAGGTAGGGGTGAGCGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCTGGGCCAGTTTACTCTaGGGCTTTGCTGCCAACGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQETLRRLEMSPMVNLHFWASLL*GFAANA Trigger: GGCGTTGGCAGCAAAGCCGCAGAGTAAACTGGCCCA...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTACCACAAGCTCCTCCTTaGGAAACTGGCTCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FTLGHPWSFNSICPTVGLPQAPP*ETGSLL Trigger: CAAAAGAGAGCCAGTTTCTCAAGGAGGAGCTTGTGG...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCGCTCACCCCTACCTAGAAAGCAGGCACTTCAGCCTACTCAGAAATGTTCCACGTCTTTCTCTTaGAGAGCAATAACACACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRSPLPRKQALQPTQKCSTSFS*RAITHL Trigger: CAAGTGTGTTATTGCTCTCCAAGAGAAAGACGTGGA...ACATTTCTGAGTAGGCTGAAGTGCCTGCTTTCTAGGTAGGGGTGAGCGCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGGTTTATCAAAGTTGTTaGGAGCGTATGCCAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQAVYQSC*ERMPAL Trigger: GAGAGCTGGCATACGCTCTCAACAACTTTGATAAAC...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTACACTGGTCCTGCTTCTaGCATCAAAGTCTTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FTLGHPWSFNSICPTVGLHWSCF*HQSLQS Trigger: AGACTGAAGACTTTGATGTCAGAAGCAGGACCAGTG...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGTTTTCTTGGCAGCACTaGTCACGTCAGAGGTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQAFSWQH*SRQRCF Trigger: AAAACACCTCTGACGTGATCAGTGCTGCCAAGAAAA...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCACTCTGCGGCTTTGCTaGCAACGCCAATGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: KQETLRRLEMSPMVNLHFTLRLC*QRQCSI Trigger: AATGCTGCATTGGCGTTGGCAGCAAAGCCGCAGAGT...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGCGTTTAATCTTGGTCTaGGTCTCATCCTGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQARLILV*VSSCFS Trigger: AGAGAAGCAGGATGAGACGCAGACCAAGATTAAACG...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTTCTGATGCAGTAGCCTaGGCTGCATTAGAAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTSDAVA*AALEIP Trigger: AGGAATTTCTAATGCAGCCCAGGCTACTGCATCAGA...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTTTGAACAGGCCAGGTTaGCAACCTCAATCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTLNRPG*QPQSVC Trigger: ACAAACTGATTGAGGTTGCCAACCTGGCCTGTTCAA...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACAGAGGTGTTTTTGAGTaGACCTTTGCCTCGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GHPWSFNSICPTVGLKSNRGVFE*TFASGE Trigger: TTCACCCGAGGCAAAGGTCCACTCAAAAACACCTCT...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGGCGCTCACCCCTACCTAGAAAGCAGGCACTTCAGCCTACTCAGAAATGTCCTCAATCAGTTTGTTaGCATGTTCACGAAAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LRRSPLPRKQALQPTQKCPQSVC*HVHEKL Trigger: AAGTTTTTCGTGAACATGCCAACAAACTGATTGAGG...ACATTTCTGAGTAGGCTGAAGTGCCTGCTTTCTAGGTAGGGGTGAGCGCCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGTCTTTTTGCTGCCATaGTGTTCAGCTTATCTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTVFLLP*CSAYLL Trigger: AAGTAGATAAGCTGAACATCATGGCAGCAAAAAGAC...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR TCA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTTTCACGTGTTTCTTCTaGGAAGCTCGTTTAATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTFTCFF*EARLIL Trigger: CAAGATTAAACGAGCTTCTCAGAAGAAACACGTGAA...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGTCAAGGGGTCCACAATaGTTTGTTTATCAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFAGPKQETLRRLEMSPMSRGPQ*FVYQSC Trigger: ACAACTTTGATAAACAAATCATTGTGGACCCCTTGA...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR TCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGTATCTATTGCAGAGTTaGGTGCATCACTTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQAYLLQS*VHHFFL Trigger: AAGAAAGAAGTGATGCACTCAACTCTGCAATAGATA...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGGTCATTTTATCTATTaGAGAGTTGAGTGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: FFAGPKQETLRRLEMSPMGHFIY*RVECIT Trigger: AGTGATGCACTCAACTCTGCAATAGATAAAATGACC...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGTCCTCCTTGAGAAACTaGCTCTCTTTTGCAATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FNSICPTVGLKSNLSPQASSLRN*LSFAIL Trigger: TAAAATTGCAAAAGAGAGCCAGTTTCTCAAGGAGGA...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CCA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACTGTTCACGAAAAACTTaGGCATATTCCTTAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GHPWSFNSICPTVGLKSNCSRKT*AYSLTS Trigger: AGAAGTTAAGGAATATGCCCAAGTTTTTCGTGAACA...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGGCCAGCAGGTCCTGCTaGCATGCCGAGTCTGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FNSICPTVGLKSNLSPQAASRSC*HAESGQ Trigger: TTGCCCAGACTCGGCATGCAAGCAGGACCTGCTGGC...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACGCTGCCCGGACCATGTaGCCTCGCTTCACAGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GHPWSFNSICPTVGLKSNAARTM*PRFTEE Trigger: CTCTTCTGTGAAGCGAGGCAACATGGTCCGGGCAGC...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTTGGTCCATGACAGCTTaGCGAAGCTGTCTACGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTWSMTA*RSCLRK Trigger: CTTGCGTAGACAGCTTCGCAAAGCTGTCATGGACCA...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | ACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACCTTCATTGTTGGAGATaGAACAGGCCAGGTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLCSHQASLLAQSRKHCDLHCWR*NRPGWQ Trigger: TTGCCAACCTGGCCTGTTCAATCTCCAACAATGAAG...GTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCCGCGGCATGACTGTGTaGGAGAGGAGCTTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KQETLRRLEMSPMVNLHFRGMTV*ERSLVA Trigger: AGCCACCAAGCTCCTCTCCAACACAGTCATGCCGCG...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAACGTCAGAGGTGTTTTaGAGTGGACCTTTGCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FTLGHPWSFNSICPTVGLTSEVF*SGPLPR Trigger: CCGAGGCAAAGGTCCACTCAAAAACACCTCTGACGT...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCTTCAGTCTCGAAGTCAGAGTCGTCCAACTCCTCGGGGGTCCTGATCATCCTAATCTCCAGACTTTaGGGGTCCCATTTGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSSVSKSESSNSSGVLIILISRL*GSHLKF Trigger: AAACTTCAAATGGGACCCCAAAAGTCTGGAGATTAG...GATGATCAGGACCCCCGAGGAGTTGGACGACTCTGACTTCGAGACTGAAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237855.2 |
||
| CDS-3UTR CAA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACTCTTTACGTCCAGCGTaGCCCATGTATTCTGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHPWSFNSICPTVGLKSNSLRPA*PMYSES Trigger: GCTCTCAGAATACATGGGCAACGCTGGACGTAAAGA...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGATTGAACAGGCCAGGTaGGCAACCTCAATCAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FFAGPKQETLRRLEMSPMIEQAR*ATSISL Trigger: CAAACTGATTGAGGTTGCCAACCTGGCCTGTTCAAT...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCTTTTTGAGTGGACCTTaGCCTCGGGTGAAGTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQETLRRLEMSPMVNLHFFLSGP*PRVKSV Trigger: GACCGACTTCACCCGAGGCAAAGGTCCACTCAAAAA...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGGCAACCTCAATCAGTTaGTTGGCATGTTCACGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FNSICPTVGLKSNLSPQAATSIS*LACSRK Trigger: TTTTCGTGAACATGCCAACAAACTGATTGAGGTTGC...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGGTGAATTTGCATTTCGAAGCTCGTTTAATCTaGGTCTGCGTCTCATCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQETLRRLEMSPMVNLHFEARLI*VCVSSC Trigger: GCAGGATGAGACGCAGACCAAGATTAAACGAGCTTC...GAAATGCAAATTCACCATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTACTAATCTCCAGACTTTaGGGGTCCCATTTGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FTLGHPWSFNSICPTVGLLISRL*GSHLKF Trigger: AAACTTCAAATGGGACCCCAAAAGTCTGGAGATTAG...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
||
| CDS-3UTR CAA 90 bp | GGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACTCTGGTTTCAGAGCTTaGTACTGTATCCCTAAGTCT | + |
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Preference number: 5 (lower is better) Translates to: GHPWSFNSICPTVGLKSNSGFRA*YCIPKS Trigger: AGACTTAGGGATACAGTACAAAGCTCTGAAACCAGA...GTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR CAA 90 bp | TTCTTTGCTGGCCCAAAGCAGGAAACACTGCGACGATTAGAAATGAGCCCGATGATGCAGTATAGAGGATaGGAACATTTTTCTGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: FFAGPKQETLRRLEMSPMMQYRG*EHFSAG Trigger: TCCTGCAGAAAAATGTTCCAATCCTCTATACTGCAT...CATCGGGCTCATTTCTAATCGTCGCAGTGTTTCCTGCTTTGGGCCAGCAAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR CAA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAATCCACGTCTTTCTCTaGGAGAGCAATAACACACTT | + |
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Preference number: 5 (lower is better) Translates to: FTLGHPWSFNSICPTVGLIHVFL*ESNNTL Trigger: AAGTGTGTTATTGCTCTCCAAGAGAAAGACGTGGAT...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR CAA 90 bp | AGCAAACCCTATGCAGTCATCAGGCTTCTTTGCTGGCCCAAAGCAGGAAACACTCTTCATCAAATCTCCTaGTTTTCGAACATCTTCTAC | + |
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Preference number: 5 (lower is better) Translates to: SKPYAVIRLLCWPKAGNTLHQIS*FSNIFY Trigger: GTAGAAGATGTTCGAAAACAAGGAGATTTGATGAAG...AGTGTTTCCTGCTTTGGGCCAGCAAAGAAGCCTGATGACTGCATAGGGTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR CAA 90 bp | TTTAATTCCATCTGCCCAACAGTAGGGCTAAAAAGCAACCTCTCCCCTCAGGCGATGTTCACGAAAAACTaGGGCATATTCCTTAACTTC | + |
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Preference number: 5 (lower is better) Translates to: FNSICPTVGLKSNLSPQAMFTKN*GIFLNF Trigger: GAAGTTAAGGAATATGCCCAAGTTTTTCGTGAACAT...CGCCTGAGGGGAGAGGTTGCTTTTTAGCCCTACTGTTGGGCAGATGGAATTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR CAA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTAACCTCAATCAGTTTGTaGGCATGTTCACGAAAAACT | + |
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Preference number: 5 (lower is better) Translates to: FTLGHPWSFNSICPTVGLTSISL*ACSRKT Trigger: AGTTTTTCGTGAACATGCCAACAAACTGATTGAGGT...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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| CDS-3UTR CAA 90 bp | TTTACACTGGGCCACCCTTGGTCATTTAATTCCATCTGCCCAACAGTAGGGCTATTATCTATTGCAGAGTaGAGTGCATCACTTCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: FTLGHPWSFNSICPTVGLLSIAE*SASLLS Trigger: AGAAAGAAGTGATGCACTCAACTCTGCAATAGATAA...TAGCCCTACTGTTGGGCAGATGGAATTAAATGACCAAGGGTGGCCCAGTGTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042345.8 |
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