Pregenerated sensors for CTLA2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074874Ensembl transcript IDs: ENSMUST00000021884.10, ENSMUST00000171347.9, ENSMUST00000225439.2, ENSMUST00000225732.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAACTCTCCCCACATTTCAAAGAGCTGAACACTTAGTCAAACAGTaGACTGCATGTTGTTTCACACCTGAAGCAAGTGAGGACTTCAGT | + |
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Preference number: 1 (lower is better) Translates to: KTLPTFQRAEHLVKQ*TACCFTPEASEDFS Trigger: ACTGAAGTCCTCACTTGCTTCAGGTGTGAAACAACATGCAGTTCACTGTTTGACTAAGTGTTCAGCTCTTTGAAATGTGGGGAGAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR TCA 90 bp | CCTTGTGAGAATCATTTAAGGAACTTCAGAGCTAAAAATTGGCAATaGTTTCTCAGTATGACTGTGCCTCAGAGTTCACACCACAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: PCENHLRNFRAKNWQ*FLSMTVPQSSHHSV Trigger: AACACTGTGGTGTGAACTCTGAGGCACAGTCATACTGAGAAATCATTGCCAATTTTTAGCTCTGAAGTTCCTTAAATGATTCTCACAAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR TCA 90 bp | AGTCTGCATTGTGTGCCTCAATTTTCTTCTTATTCTCCTCCCACATaGGTCTTCTGTGTCTTTCTTCATCCTGAAAATGAGTACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: SLHCVPQFSSYSPPT*VFCVFLHPENEYNR Trigger: TCTGTTGTACTCATTTTCAGGATGAAGAAAGACACAGAAGACTCATGTGGGAGGAGAATAAGAAGAAAATTGAGGCACACAATGCAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTGCTGTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGCTTTCTGTGGGCAGCTaGGGGTGGGAGTGTGACTCT | + |
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Preference number: 2 (lower is better) Translates to: LPAVEPLQHHSSHTRRQKLSVGS*GWECDS Trigger: AGAGTCACACTCCCACCCTCAGCTGCCCACAGAAAG...CTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAACAGCAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR CCA 90 bp | GTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGCTTCTCAGCTTTCTGTaGGCAGCTGAGGGTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VEPLQHHSSHTRRQKTPKLLSFL*AAEGGS Trigger: ACTCCCACCCTCAGCTGCCCACAGAAAGCTGAGAAG...CTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR CAA 90 bp | ATCACACAGCACATGCTGGACACTGTGATGGGCTGCTTCCTGCTGTaGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: ITQHMLDTVMGCFLL*SLYSIIPPIPGDRR Trigger: TCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGCCCATCACAGTGTCCAGCATGTGCTGTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGCTGTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTGCTGCTTCCTGCTGTTaGGCCTCTACAGCATCATTC | + |
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Preference number: 2 (lower is better) Translates to: PAVEPLQHHSSHTRRQKTAASCC*ASTASF Trigger: GAATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGC...AGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAACAGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR TCA 90 bp | CATACCAGGAGACAGAAGACTCCCAAGACAATGCAGAGTGCTTGCTTCACTCCTACATGCTGGACACTGTaGTGGGCTGCTTCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HTRRQKTPKTMQSACFTPTCWTL*WAASCC Trigger: ACAGCAGGAAGCAGCCCATCACAGTGTCCAGCATGT...AGGAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCTTCTGTCTCCTGGTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGACAACTTCTCAGCTTTCTGTaGGCAGCTGAGGGTGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: SLYSIIPPIPGDRRLPRQLLSFL*AAEGGS Trigger: ACTCCCACCCTCAGCTGCCCACAGAAAGCTGAGAAG...TTGTCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGAGCTGCTTCCTGCTGTTaGGCCTCTACAGCATCATTC | + |
|
Preference number: 2 (lower is better) Translates to: LSLYSIIPPIPGDRRLPRAASCC*ASTASF Trigger: GAATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGC...TCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTTACCAGTCAAGCCACAACTGTTACTCTGGCTGAAGCAAGTGAGGACTTCACTTCTCAGCTTTCTGTaGGCAGCTGAGGGTGGGAGT | + |
|
Preference number: 2 (lower is better) Translates to: LLPVKPQLLLWLKQVRTSLLSFL*AAEGGS Trigger: ACTCCCACCCTCAGCTGCCCACAGAAAGCTGAGAAG...TGAAGTCCTCACTTGCTTCAGCCAGAGTAACAGTTGTGGCTTGACTGGTAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225732.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGAAGACTCCCAAGACAATaGAGAGTGCTTGCTTCACTC | + |
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Preference number: 2 (lower is better) Translates to: LSLYSIIPPIPGDRRLPRRLPRQ*RVLASL Trigger: GAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCT...TCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGAGACAGAAGACTCCCAAGACAATGCAGAGTGCTTGCTTCACTCCTAGAAGACTCCCAAGACAATaGAGAGTGCTTGCTTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TRRQKTPKTMQSACFTPRRLPRQ*RVLASL Trigger: GAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCT...TCTAGGAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCTTCTGTCTCCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR CAA 90 bp | TCCACAGCAATTTGTCCTGAATTCTTCTGGAGTCAAGTCACTAAATaGATTCAGGCCCATGTAGAAGCTGGTCTTGCCCCGCTCATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: STAICPEFFWSQVTK*IQAHVEAGLAPLIV Trigger: GACTATGAGCGGGGCAAGACCAGCTTCTACATGGGCCTGAATCAATTTAGTGACTTGACTCCAGAAGAATTCAGGACAAATTGCTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGATAGCTGTTCTTTCCCAAATCTTCATATTCAGGCAAATCAGGAGCCATTTACATGCTGGACACTGTaGTGGGCTGCTTCCTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SDSCSFPNLHIQANQEPFTCWTL*WAASCC Trigger: ACAGCAGGAAGCAGCCCATCACAGTGTCCAGCATGT...AAATGGCTCCTGATTTGCCTGAATATGAAGATTTGGGAAAGAACAGCTATCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR TCA 90 bp | CATGAGTCTTCTGTGTCTTTCTTCATCCTGAAAATGAGTACAACAGATAGCATTCTTTCTGTGGGCAGCTaGGGGTGGGAGTGTGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: HESSVSFFILKMSTTDSILSVGS*GWECDS Trigger: AGAGTCACACTCCCACCCTCAGCTGCCCACAGAAAG...AATGCTATCTGTTGTACTCATTTTCAGGATGAAGAAAGACACAGAAGACTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR TCA 90 bp | AGTACAGTGGCTTTGTCACAATACTACTCTGACATATATTGCCTTCATGTTCACGCTGCTTCCTGCTGTTaGGCCTCTACAGCATCATTC | + |
|
Preference number: 2 (lower is better) Translates to: STVALSQYYSDIYCLHVHAASCC*ASTASF Trigger: GAATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGC...GTGAACATGAAGGCAATATATGTCAGAGTAGTATTGTGACAAAGCCACTGTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTCACAATACTACTCTGACATATATTGCCTTCATGTTCACAATGTTCAATGCCTTTCTGTGGGCAGCTaGGGGTGGGAGTGTGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: LSQYYSDIYCLHVHNVQCLSVGS*GWECDS Trigger: AGAGTCACACTCCCACCCTCAGCTGCCCACAGAAAG...GCATTGAACATTGTGAACATGAAGGCAATATATGTCAGAGTAGTATTGTGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTGCAGTACAGTGGCTTTGTCACAATACTACTCTGACATATATTGCCTTCATAGACTCCCAAGACAATaGAGAGTGCTTGCTTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: GCSTVALSQYYSDIYCLHRLPRQ*RVLASL Trigger: GAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCT...ATGAAGGCAATATATGTCAGAGTAGTATTGTGACAAAGCCACTGTACTGCAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGAATTCTTCTGGAGTCAAGTCACTAAATTGATTCAGGCCCATGTAGAAGCTATGGCTGCAGTACAGTaGCTTTGTCACAATACTACT | + |
|
Preference number: 2 (lower is better) Translates to: PEFFWSQVTKLIQAHVEAMAAVQ*LCHNTT Trigger: AGTAGTATTGTGACAAAGCCACTGTACTGCAGCCAT...AGCTTCTACATGGGCCTGAATCAATTTAGTGACTTGACTCCAGAAGAATTCAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR CCA 90 bp | TATTGTTACCAGTCAAGCCACAACTGTTACTCTGGCTGGAATAAAAGCACACATCACAAGCTGAGGAAATaGTATGTAGAGAAAGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: YCYQSSHNCYSGWNKSTHHKLRK*YVEKEE Trigger: CTCTTCTTTCTCTACATACCATTTCCTCAGCTTGTG...ATGTGTGCTTTTATTCCAGCCAGAGTAACAGTTGTGGCTTGACTGGTAACAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR GCA 72 bp | CATATCACACAGCACATGCTGGACACTGTGATGGGCTaGTTCCTGCTGTTGAGCCTCTACAGCATCATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HITQHMLDTVMG*FLLLSLYSIIP Trigger: AGGAATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGCCCATCACAGTGTCCAGCATGTGCTGTGTGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR GCA 72 bp | GAAGCTGGTCTTGCCCCGCTCATAGTCTGCATTGTGTaGCTCAATTTTCTTCTTATTCTCCTCCCACATGAG | + |
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Preference number: 3 (lower is better) Translates to: EAGLAPLIVCIV*LNFLLILLPHE Trigger: CTCATGTGGGAGGAGAATAAGAAGAAAATTGAGGCACACAATGCAGACTATGAGCGGGGCAAGACCAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR CAA 90 bp | CTCCCAAGACAATGCAGAGTGCTTGCTTCACTCCTAGACTATGATATTGTTACCGGCTGCTTCCTGCTGTaGAGCCTCTACAGCATCATT | + |
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Preference number: 3 (lower is better) Translates to: LPRQCRVLASLLDYDIVTGCFLL*SLYSII Trigger: AATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGCC...GGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCTGCATTGTCTTGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGCTGTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTGTTCACACCACAGTGTaGATCTTATATGAGTTCAGT | + |
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Preference number: 3 (lower is better) Translates to: PAVEPLQHHSSHTRRQKTVHTTV*ILYEFS Trigger: ACTGAACTCATATAAGATCAACACTGTGGTGTGAAC...AGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAACAGCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR GCA 72 bp | CCTCCCATACCAGGAGACAGAAGACTCCCAAGACAATaGAGAGTGCTTGCTTCACTCCTAGACTATGATATT | + |
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Preference number: 3 (lower is better) Translates to: PPIPGDRRLPRQ*RVLASLLDYDI Trigger: AATATCATAGTCTAGGAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR CAA 90 bp | TATTGTTACCAGTCAAGCCACAACTGTTACTCTGGCTGGAATAAAAGCACACATGGCTGCTTCCTGCTGTaGAGCCTCTACAGCATCATT | + |
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Preference number: 3 (lower is better) Translates to: YCYQSSHNCYSGWNKSTHGCFLL*SLYSII Trigger: AATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGCC...ATGTGTGCTTTTATTCCAGCCAGAGTAACAGTTGTGGCTTGACTGGTAACAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR GCA 72 bp | GTCCTTAGTGATGGCTTGTCTTTATGGCCATATTTATaGCCACAGACTCCCAACAGCAAGAGTCCTTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: VLSDGLSLWPYL*PQTPNSKSPSF Trigger: GAAAGAAGGACTCTTGCTGTTGGGAGTCTGTGGGCATAAATATGGCCATAAAGACAAGCCATCACTAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR CCA 72 bp | GTCTTTAGGCAAGTCCTTAGTGATGGCTTGTCTTTATaGCCATATTTATGCCCACAGACTCCCAACAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: VFRQVLSDGLSL*PYLCPQTPNSK Trigger: CTTGCTGTTGGGAGTCTGTGGGCATAAATATGGCCATAAAGACAAGCCATCACTAAGGACTTGCCTAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCATATCACGGCTGCTTCCTGCTGTaGAGCCTCTACAGCATCATT | + |
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Preference number: 3 (lower is better) Translates to: LRVHTTVLILYEFSFAYHGCFLL*SLYSII Trigger: AATGATGCTGTAGAGGCTCAACAGCAGGAAGCAGCC...GTGATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGACAATTATATGAGTTCAGTTTaGCATATCACACAGCACATG | + |
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Preference number: 3 (lower is better) Translates to: ASTASFLPYQETEDSQDNYMSSV*HITQHM Trigger: CATGTGCTGTGTGATATGCAAAACTGAACTCATATA...ATTGTCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR TCA 72 bp | GTGCCTCAGAGTTCACACCACAGTGTTGATCTTATATaGGTTCAGTTTTGCATATCACACAGCACATGCTGG | + |
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Preference number: 3 (lower is better) Translates to: VPQSSHHSVDLI*VQFCISHSTCW Trigger: CCAGCATGTGCTGTGTGATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR TCA 72 bp | TATGTAGAGAAAGAAGAGCCAAAGCATGTGGTCTCATaGCACTGTTGTCAGCCATTCTCCTTACCCAGTATG | + |
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Preference number: 3 (lower is better) Translates to: YVEKEEPKHVVS*HCCQPFSLPSM Trigger: CATACTGGGTAAGGAGAATGGCTGACAACAGTGTCATGAGACCACATGCTTTGGCTCTTCTTTCTCTACATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR TCA 72 bp | TTCAGGCAAATCAGGAGCCATTTCTCCTCTACACATTaGGCTTCCACAGCAATTTGTCCTGAATTCTTCTGG | + |
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Preference number: 3 (lower is better) Translates to: FRQIRSHFSSTH*ASTAICPEFFW Trigger: CCAGAAGAATTCAGGACAAATTGCTGTGGAAGCTCAATGTGTAGAGGAGAAATGGCTCCTGATTTGCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR TCA 72 bp | CCCACATTTCAAAGAGCTGAACACTTAGTCAAACAGTaGACTGCATGTTGTTTCACACCTGAAGCAAGTGAG | + |
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Preference number: 3 (lower is better) Translates to: PTFQRAEHLVKQ*TACCFTPEASE Trigger: CTCACTTGCTTCAGGTGTGAAACAACATGCAGTTCACTGTTTGACTAAGTGTTCAGCTCTTTGAAATGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR TCA 72 bp | AAGACAATGCAGAGTGCTTGCTTCACTCCTAGACTATaGTATTGTTACCAGTCAAGCCACAACTGTTACTCT | + |
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Preference number: 3 (lower is better) Translates to: KTMQSACFTPRL*YCYQSSHNCYS Trigger: AGAGTAACAGTTGTGGCTTGACTGGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCTGCATTGTCTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR CCA 72 bp | ATTTCTCATCTTAACACCACACACAAGCTGAGGAAATaGTATGTAGAGAAAGAAGAGCCAAAGCATGTGGTC | + |
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Preference number: 3 (lower is better) Translates to: ISHLNTTHKLRK*YVEKEEPKHVV Trigger: GACCACATGCTTTGGCTCTTCTTTCTCTACATACCATTTCCTCAGCTTGTGTGTGGTGTTAAGATGAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR TCA 72 bp | TGGCTGCAGTACAGTGGCTTTGTCACAATACTACTCTaGCATATATTGCCTTCATGTTCACAATGTTCAATG | + |
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Preference number: 3 (lower is better) Translates to: WLQYSGFVTILL*HILPSCSQCSM Trigger: CATTGAACATTGTGAACATGAAGGCAATATATGTCAGAGTAGTATTGTGACAAAGCCACTGTACTGCAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR CCA 72 bp | GCACACATCACATTAATTAGAATGGCTGCAGTACAGTaGCTTTGTCACAATACTACTCTGACATATATTGCC | + |
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Preference number: 3 (lower is better) Translates to: AHITLIRMAAVQ*LCHNTTLTYIA Trigger: GGCAATATATGTCAGAGTAGTATTGTGACAAAGCCACTGTACTGCAGCCATTCTAATTAATGTGATGTGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR-3UTR CAA 90 bp | CTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCATATCACTATATGAGTTCAGTTTaGCATATCACACAGCACATG | + |
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Preference number: 3 (lower is better) Translates to: LRVHTTVLILYEFSFAYHYMSSV*HITQHM Trigger: CATGTGCTGTGTGATATGCAAAACTGAACTCATATA...GTGATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR TCA 72 bp | AATCATTTAAGGAACTTCAGAGCTAAAAATTGGCAATaGTTTCTCAGTATGACTGTGCCTCAGAGTTCACAC | + |
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Preference number: 3 (lower is better) Translates to: NHLRNFRAKNWQ*FLSMTVPQSSH Trigger: GTGTGAACTCTGAGGCACAGTCATACTGAGAAATCATTGCCAATTTTTAGCTCTGAAGTTCCTTAAATGATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 ENSMUST00000225732.2 |
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| 3UTR GCA 72 bp | ACAGTGGCTTTGTCACAATACTACTCTGACATATATTaGCTTCATGTTCACAATGTTCAATGCCAAAATACA | + |
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Preference number: 3 (lower is better) Translates to: TVALSQYYSDIY*LHVHNVQCQNT Trigger: TGTATTTTGGCATTGAACATTGTGAACATGAAGGCAATATATGTCAGAGTAGTATTGTGACAAAGCCACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| CDS-3UTR CCA 90 bp | CCTGCTGTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCTCATTATCCAAACTTaGATCAGGGGATGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: PAVEPLQHHSSHTRRQKTLIIQT*IRGWSS Trigger: GCTGCTCCATCCCCTGATCCAAGTTTGGATAATGAG...AGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAACAGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| CDS-3UTR TCA 90 bp | TTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGATATTCTCCTCCCACATaGGTCTTCTGTGTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LSLYSIIPPIPGDRRLPRYSPPT*VFCVFL Trigger: AAGAAAGACACAGAAGACTCATGTGGGAGGAGAATA...TCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 |
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| CDS-3UTR TCA 90 bp | TTCCTGCTGTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACACAGCAATTTGTCCTaGATTCTTCTGGAGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: FLLLSLYSIIPPIPGDRRHSNLS*ILLESS Trigger: ACTTGACTCCAGAAGAATTCAGGACAAATTGCTGTG...TCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAACAGCAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR TCA 90 bp | TTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGATTCTCCTCTACACATTaGGCTTCCACAGCAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: LSLYSIIPPIPGDRRLPRFSSTH*ASTAIC Trigger: ACAAATTGCTGTGGAAGCTCAATGTGTAGAGGAGAA...TCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR TCA 90 bp | ACCAGGAGACAGAAGACTCCCAAGACAATGCAGAGTGCTTGCTTCACTCCTAGATTCTCCTCTACACATTaGGCTTCCACAGCAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: TRRQKTPKTMQSACFTPRFSSTH*ASTAIC Trigger: ACAAATTGCTGTGGAAGCTCAATGTGTAGAGGAGAA...TCTAGGAGTGAAGCAAGCACTCTGCATTGTCTTGGGAGTCTTCTGTCTCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR CCA 90 bp | TGCAGAGTGCTTGCTTCACTCCTAGACTATGATATTGTTACCAGTCAAGCCACACTCATTATCCAAACTTaGATCAGGGGATGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CRVLASLLDYDIVTSQATLIIQT*IRGWSS Trigger: GCTGCTCCATCCCCTGATCCAAGTTTGGATAATGAG...TGTGGCTTGACTGGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| 3UTR CAA 72 bp | GAAAGAAGAGCCAAAGCATGTGGTCTCATGACACTGTaGTCAGCCATTCTCCTTACCCAGTATGGGTTCATA | + |
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Preference number: 4 (lower is better) Translates to: ERRAKACGLMTL*SAILLTQYGFI Trigger: TATGAACCCATACTGGGTAAGGAGAATGGCTGACAACAGTGTCATGAGACCACATGCTTTGGCTCTTCTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| 3UTR CAA 72 bp | ATTTGTCCTGAATTCTTCTGGAGTCAAGTCACTAAATaGATTCAGGCCCATGTAGAAGCTGGTCTTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: ICPEFFWSQVTK*IQAHVEAGLAP Trigger: CGGGGCAAGACCAGCTTCTACATGGGCCTGAATCAATTTAGTGACTTGACTCCAGAAGAATTCAGGACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| CDS-3UTR TCA 90 bp | CTCCCAAGACAATGCAGAGTGCTTGCTTCACTCCTAGACTATGATATTGTTACCTATTCTCCTCCCACATaGGTCTTCTGTGTCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPRQCRVLASLLDYDIVTYSPPT*VFCVFL Trigger: AAGAAAGACACAGAAGACTCATGTGGGAGGAGAATA...GGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCTGCATTGTCTTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 |
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| CDS-3UTR TCA 90 bp | CTGTGCCTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCACACAGCAATTTGTCCTaGATTCTTCTGGAGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LCLRVHTTVLILYEFSFAHSNLS*ILLESS Trigger: ACTTGACTCCAGAAGAATTCAGGACAAATTGCTGTG...TGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAGGCACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR TCA 90 bp | CCAAGACAATGCAGAGTGCTTGCTTCACTCCTAGACTATGATATTGTTACCAGTTTCTCCTCTACACATTaGGCTTCCACAGCAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: PRQCRVLASLLDYDIVTSFSSTH*ASTAIC Trigger: ACAAATTGCTGTGGAAGCTCAATGTGTAGAGGAGAA...ACTGGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCTGCATTGTCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR CCA 90 bp | TGCCTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCATATCTCATTATCCAAACTTaGATCAGGGGATGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CLRVHTTVLILYEFSFAYLIIQT*IRGWSS Trigger: GCTGCTCCATCCCCTGATCCAAGTTTGGATAATGAG...ATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| CDS-3UTR TCA 90 bp | TGCCTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCATATCACAGCAATTTGTCCTaGATTCTTCTGGAGTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: CLRVHTTVLILYEFSFAYHSNLS*ILLESS Trigger: ACTTGACTCCAGAAGAATTCAGGACAAATTGCTGTG...ATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR CAA 90 bp | GTTGAGCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGAGGCTTTTGCAAATGTaGTCTTCCATTCTTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: VEPLQHHSSHTRRQKTPKRLLQM*SSILST Trigger: AGTGGAAAGAATGGAAGACAACATTTGCAAAAGCCT...CTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGCTCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| CDS-3UTR CAA 90 bp | GCCTCTACAGCATCATTCCTCCCATACCAGGAGACAGAAGACTCCCAAGACAATTTTCTCCTCTACACATaGAGCTTCCACAGCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: ASTASFLPYQETEDSQDNFLLYT*SFHSNL Trigger: CAAATTGCTGTGGAAGCTCAATGTGTAGAGGAGAAA...ATTGTCTTGGGAGTCTTCTGTCTCCTGGTATGGGAGGAATGATGCTGTAGAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR CAA 90 bp | AGAGTGCTTGCTTCACTCCTAGACTATGATATTGTTACCAGTCAAGCCACAACTAGGCTTTTGCAAATGTaGTCTTCCATTCTTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: RVLASLLDYDIVTSQATTRLLQM*SSILST Trigger: AGTGGAAAGAATGGAAGACAACATTTGCAAAAGCCT...AGTTGTGGCTTGACTGGTAACAATATCATAGTCTAGGAGTGAAGCAAGCACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| CDS-3UTR CAA 90 bp | CTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCATATCACTTTCTCCTCTACACATaGAGCTTCCACAGCAATTTG | + |
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Preference number: 5 (lower is better) Translates to: LRVHTTVLILYEFSFAYHFLLYT*SFHSNL Trigger: CAAATTGCTGTGGAAGCTCAATGTGTAGAGGAGAAA...GTGATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225732.2 |
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| CDS-3UTR CAA 90 bp | TGCCTCAGAGTTCACACCACAGTGTTGATCTTATATGAGTTCAGTTTTGCATATAGGCTTTTGCAAATGTaGTCTTCCATTCTTTCCACT | + |
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Preference number: 5 (lower is better) Translates to: CLRVHTTVLILYEFSFAYRLLQM*SSILST Trigger: AGTGGAAAGAATGGAAGACAACATTTGCAAAAGCCT...ATATGCAAAACTGAACTCATATAAGATCAACACTGTGGTGTGAACTCTGAGGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 ENSMUST00000225439.2 |
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| CDS CAA 90 bp | AGACTGTGCCCATTTTACCAACCAGACTGTAGGCTTTTGCAAATGTaGTCTTCCATTCTTTCCACTCATTATCCAAACTTGGATCAGGGG | + |
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Preference number: 6 (lower is better) Translates to: RLCPFYQPDCRLLQM*SSILSTHYPNLDQG Trigger: CCCCTGATCCAAGTTTGGATAATGAGTGGAAAGAATGGAAGACAACATTTGCAAAAGCCTACAGTCTGGTTGGTAAAATGGGCACAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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| CDS CAA 72 bp | GTCTTTCTTCATCCAGACTGTAGGCTTTTGCAAATGTaGTCTTCCATTCTTTCCACTCATTATCCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: VFLHPDCRLLQM*SSILSTHYPNL Trigger: CAAGTTTGGATAATGAGTGGAAAGAATGGAAGACAACATTTGCAAAAGCCTACAGTCTGGATGAAGAAAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021884.10 ENSMUST00000171347.9 |
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| CDS CAA 72 bp | CCATTTTACCAACCAGACTGTAGGCTTTTGCAAATGTaGTCTTCCATTCTTTCCACTCATTATCCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: PFYQPDCRLLQM*SSILSTHYPNL Trigger: CAAGTTTGGATAATGAGTGGAAAGAATGGAAGACAACATTTGCAAAAGCCTACAGTCTGGTTGGTAAAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225439.2 |
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