Pregenerated sensors for CTIF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052928Ensembl transcript IDs: ENSMUST00000165559.3
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGCGGCTGGTGGGGACCGTGCCTGCCTTTGTCCTCCCAGACATCTaGTGCCCGCTGCCTGCTGCCAGTTGGCGACCGTGGCTGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: GRLVGTVPAFVLPDI*CPLPAASWRPWLTA Trigger: TGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | CGGCTGGTGGGGACCGTGCCTGCCTTTGTCCTCCCAGACATCTGCTaGCCGCTGCCTGCTGCCAGTTGGCGACCGTGGCTGACAGCACGT | + |
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Preference number: 1 (lower is better) Translates to: RLVGTVPAFVLPDIC*PLPAASWRPWLTAR Trigger: ACGTGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | ATCTCCTCCTTCTCCGCTGGCTCCAGACCGGCCACCGTGGCTACCTaGCTCCCTGCTCAGTTCTCTTTCCCGCCAGGGCCACCCCTGTCC | + |
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Preference number: 1 (lower is better) Translates to: ISSFSAGSRPATVAT*LPAQFSFPPGPPLS Trigger: GGACAGGGGTGGCCCTGGCGGGAAAGAGAACTGAGCAGGGAGGCAGGTAGCCACGGTGGCCGGTCTGGAGCCAGCGGAGAAGGAGGAGAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | CACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCATaGCCCCAGAGGATGCAGGGAGCAGGTGCCTGTGAGCCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: HSHAHTWEAAHVSTP*PQRMQGAGACEPGL Trigger: CAGCCCAGGCTCACAGGCACCTGCTCCCTGCATCCTCTGGGGCCATGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | GGCTGCCATCTAGAGTGGCCCCAGGGAGGTGCTTCTCTTGCTTCCTaGGCTGCATCCCTGCAGCTCTGCCCTGGTTGCCACCAGTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: GCHLEWPQGGASLAS*AASLQLCPGCHQWC Trigger: ACACCACTGGTGGCAACCAGGGCAGAGCTGCAGGGATGCAGCCCAGGAAGCAAGAGAAGCACCTCCCTGGGGCCACTCTAGATGGCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | CAGGGAGGTGCTTCTCTTGCTTCCTGGGCTGCATCCCTGCAGCTCTaGCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCA | + |
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Preference number: 1 (lower is better) Translates to: QGGASLASWAASLQL*PGCHQWCTSHPPPS Trigger: TGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGAGCTGCAGGGATGCAGCCCAGGAAGCAAGAGAAGCACCTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | ACTGACAGGCTGCCATCTAGAGTGGCCCCAGGGAGGTGCTTCTCTTaGTTCCTGGGCTGCATCCCTGCAGCTCTGCCCTGGTTGCCACCA | + |
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Preference number: 1 (lower is better) Translates to: TDRLPSRVAPGRCFS*FLGCIPAALPWLPP Trigger: TGGTGGCAACCAGGGCAGAGCTGCAGGGATGCAGCCCAGGAAGCAAGAGAAGCACCTCCCTGGGGCCACTCTAGATGGCAGCCTGTCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | GAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTaGTGTGAGCTGCCACATGCGCAGGCTTGGGGGTGGGTGGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: EQGRVTTRTKRHAFP*CELPHAQAWGWVGV Trigger: CACCCCCACCCACCCCCAAGCCTGCGCATGTGGCAGCTCACACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | CCAACCCACCTCCTCGAAGAGCCAGTCAGAGGTTTCCCAACATGGTaGCAGGCAGCTGAGGGACATCATGCCACGGGCAGGCCTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PTHLLEEPVRGFPTW*QAAEGHHATGRPVC Trigger: ACACACAGGCCTGCCCGTGGCATGATGTCCCTCAGCTGCCTGGCACCATGTTGGGAAACCTCTGACTGGCTCTTCGAGGAGGTGGGTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | AAGCCTCTCTCCAGCTCCGCTGGGGCTGACAAAGGCCATCAATTATaGGCGGCTGGTGGGGACCGTGCCTGCCTTTGTCCTCCCAGACAT | + |
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Preference number: 1 (lower is better) Translates to: KPLSSSAGADKGHQL*AAGGDRACLCPPRH Trigger: ATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGATGGCCTTTGTCAGCCCCAGCGGAGCTGGAGAGAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | AAGCAGGATATACGGGTAGATGGAAGGGGTCGGCGCGAGCAGGGTTaGCCCATAGCTTTGGCGGCAATCTCCAGACCCTGCTCCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: KQDIRVDGRGRREQG*PIALAAISRPCSRE Trigger: CTCCCTGGAGCAGGGTCTGGAGATTGCCGCCAAAGCTATGGGCCAACCCTGCTCGCGCCGACCCCTTCCATCTACCCGTATATCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | GCCTGCTGCCAGTTGGCGACCGTGGCTGACAGCACGTGGGAACAATaGGAGCTGTCTCGACCCACTTTTTCAGCCTTCAGCAGTCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: ACCQLATVADSTWEQ*ELSRPTFSAFSSPG Trigger: GCCAGGACTGCTGAAGGCTGAAAAAGTGGGTCGAGACAGCTCTCATTGTTCCCACGTGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | CAGACATCTGCTGCCCGCTGCCTGCTGCCAGTTGGCGACCGTGGCTaGCAGCACGTGGGAACAATGAGAGCTGTCTCGACCCACTTTTTC | + |
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Preference number: 1 (lower is better) Translates to: QTSAARCLLPVGDRG*QHVGTMRAVSTHFF Trigger: GAAAAAGTGGGTCGAGACAGCTCTCATTGTTCCCACGTGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGCAGATGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | GCAGCCTTGGAGGTAGGGCTTGTGGGTCTTGCCTGGGATGCGGCATaGGATCATGAAGGAGGCTCCAAGATCTGTGGAGTCAGCAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: AALEVGLVGLAWDAA*DHEGGSKICGVSSG Trigger: CCCACTGCTGACTCCACAGATCTTGGAGCCTCCTTCATGATCCCATGCCGCATCCCAGGCAAGACCCACAAGCCCTACCTCCAAGGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | GCTTCTCTTGCTTCCTGGGCTGCATCCCTGCAGCTCTGCCCTGGTTaGCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAATA | + |
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Preference number: 1 (lower is better) Translates to: ASLASWAASLQLCPG*HQWCTSHPPPSDRI Trigger: TATTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGAGCTGCAGGGATGCAGCCCAGGAAGCAAGAGAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | ACAATGAGAGCTGTCTCGACCCACTTTTTCAGCCTTCAGCAGTCCTaGCTGACCCAAGCGGTGGCCAGAGGTGTGGGAGGCAGAGAGGCA | + |
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Preference number: 1 (lower is better) Translates to: TMRAVSTHFFSLQQS*LTQAVARGVGGREA Trigger: TGCCTCTCTGCCTCCCACACCTCTGGCCACCGCTTGGGTCAGCCAGGACTGCTGAAGGCTGAAAAAGTGGGTCGAGACAGCTCTCATTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | ATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATaGTTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGGCTTGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: IVYLAAYQTVPVRTQ*FPLSPAALEVGLVG Trigger: ACCCACAAGCCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | GCAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTaGGTGGAAAACAAGGACCAACTTGTCCTGACAGGTGGGCGGAGC | + |
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Preference number: 1 (lower is better) Translates to: AIRPVHEEGSDQQAT*VENKDQLVLTGGRS Trigger: GCTCCGCCCACCTGTCAGGACAAGTTGGTCCTTGTTTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | GCAGCTGAGGGACATCATGCCACGGGCAGGCCTGTGTGTATGGGATaGCGAACACTGTCCGGCTTCCAATTCCAGATAACAGCCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: AAEGHHATGRPVCMG*RTLSGFQFQITAQG Trigger: ACCCTGGGCTGTTATCTGGAATTGGAAGCCGGACAGTGTTCGTCATCCCATACACACAGGCCTGCCCGTGGCATGATGTCCCTCAGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | GCTGGCTCAGTGAGGCTCCAGATAGATCTTCTGGGGCCAGTGCCCTaGGCAGAGGAGAATTCTAGTCTCTCCAACCCACCTCCTCGAAGA | + |
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Preference number: 1 (lower is better) Translates to: AGSVRLQIDLLGPVP*AEENSSLSNPPPRR Trigger: TCTTCGAGGAGGTGGGTTGGAGAGACTAGAATTCTCCTCTGCTCAGGGCACTGGCCCCAGAAGATCTATCTGGAGCCTCACTGAGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | GTCGTGACCCACAGGTTGAGAACCACTGGTTTAGAGCCTCCACCATaGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTGGACACATGT | + |
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Preference number: 1 (lower is better) Translates to: VVTHRLRTTGLEPPP*SRYAQVQCMGLDTC Trigger: ACATGTGTCCAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGGTGGAGGCTCTAAACCAGTGGTTCTCAACCTGTGGGTCACGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | CTCTCTGATGGCCTCCTCCTCCTCCCTAGCCTTTATAGAAGTGGTTaGTCCCTGGGACCAGAGCCTCCCAAGAAACCAGGACTTTGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LSDGLLLLPSLYRSG*SLGPEPPKKPGLCF Trigger: GAAACAAAGTCCTGGTTTCTTGGGAGGCTCTGGTCCCAGGGAGCAACCACTTCTATAAAGGCTAGGGAGGAGGAGGAGGCCATCAGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | TTCCTTTTTCTCAGCAGCCCTCTTCAGAGGCCCCATCTTGGGACCTaGACACTTGAGTTGGAGACAGCCACAGAGAACTCGGGAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: FLFLSSPLQRPHLGT*TLELETATENSGTL Trigger: GAGAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGATGGGGCCTCTGAAGAGGGCTGCTGAGAAAAAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | CCTGGGACCAGAGCCTCCCAAGAAACCAGGACTTTGTTTCTAGCCTaGAGAACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PGTRASQETRTLFLA*RTSLSIWLPTKPSQ Trigger: CTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGTTCTTCAGGCTAGAAACAAAGTCCTGGTTTCTTGGGAGGCTCTGGTCCCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | TTGGAGACAGCCACAGAGAACTCGGGAACTCTCCCTCCTCCACCCTaGTCGCTTTCTACTCTTCTAGACTTGGGACAGTTAGGAGAAACC | + |
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Preference number: 1 (lower is better) Translates to: LETATENSGTLPPPP*SLSTLLDLGQLGET Trigger: GGTTTCTCCTAACTGTCCCAAGTCTAGAAGAGTAGAAAGCGATCAGGGTGGAGGAGGGAGAGTTCCCGAGTTCTCTGTGGCTGTCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | TCTGTGAGCCCAATGAGGAGTCTAGGAGACCTCTCTACTGTGGCTTaGGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGTCCTGCTTCA | + |
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Preference number: 1 (lower is better) Translates to: SVSPMRSLGDLSTVA*VPTISLFLPQGPAS Trigger: TGAAGCAGGACCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAGAGAGGTCTCCTAGACTCCTCATTGGGCTCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | GCTCCAAGATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTaGTCGGAACAAGACCTGCATTTGGTTGTAATTTGCCAGCCTCGT | + |
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Preference number: 1 (lower is better) Translates to: APRSVESAVGSSLNS*SEQDLHLVVICQPR Trigger: ACGAGGCTGGCAAATTACAACCAAATGCAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGATCTTGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR TCA 90 bp | AGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACACAAGTTTaGGAGAGGCTTTGCCTCCTGTTCATTCATCAGAGGCAGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: RLNIRASWPDRTTQV*ERLCLLFIHQRQAL Trigger: CAAAGCCTGCCTCTGATGAATGAACAGGAGGCAAAGCCTCTCTCAAACTTGTGTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | TCTCTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATGCAAATaGACACACACACACACACACACACACACACACACACATACACAC | + |
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Preference number: 1 (lower is better) Translates to: SLPSSRSCFILSRCK*THTHTHTHTHTHTH Trigger: GTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR GCA 90 bp | CATCAGTCTCTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATaGAAATGCACACACACACACACACACACACACACACACACACAT | + |
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Preference number: 1 (lower is better) Translates to: HQSLPSSRSCFILSR*KCTHTHTHTHTHTH Trigger: ATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGACTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CCA 90 bp | TGGAAAGTGTCATATCAGGATGGACCAGGAAGTAGTTTCAAACAATaGAATACGCTAGGCAAACTGCAAGTCTGGAGCCACTGGGACACA | + |
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Preference number: 1 (lower is better) Translates to: WKVSYQDGPGSSFKQ*NTLGKLQVWSHWDT Trigger: TGTGTCCCAGTGGCTCCAGACTTGCAGTTTGCCTAGCGTATTCCATTGTTTGAAACTACTTCCTGGTCCATCCTGATATGACACTTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCTGGCTCAGTGAGGCTCCAGATAGATCTTCTGGGGCCAGTGCCCTGAGCTGCCAGGGGGAGCAGTaGGCCCTGGGGCTGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: PSWLSEAPDRSSGASALSCQGEQ*ALGLEA Trigger: GGCCTCCAGCCCCAGGGCCCACTGCTCCCCCTGGCA...GCTCAGGGCACTGGCCCCAGAAGATCTATCTGGAGCCTCACTGAGCCAGCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CAA 90 bp | CGGGTAGATGGAAGGGGTCGGCGCGAGCAGGGTTGGCCCATAGCTTaGGCGGCAATCTCCAGACCCTGCTCCAGGGAGGTAGGTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RVDGRGRREQGWPIA*AAISRPCSREVGPV Trigger: AACAGGACCTACCTCCCTGGAGCAGGGTCTGGAGATTGCCGCCAAAGCTATGGGCCAACCCTGCTCGCGCCGACCCCTTCCATCTACCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAGCCTGGGCTGCCCAAGTCCACAGGAGCAGGATCTCCCTGGTGTCTTCTCCTGCAAGGTAGGGGGTaGGGAGGACTGGAGCCGAGG | + |
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Preference number: 2 (lower is better) Translates to: CEPGLPKSTGAGSPWCLLLQGRG*GGLEPR Trigger: CCTCGGCTCCAGTCCTCCCCACCCCCTACCTTGCAG...GAGAAGACACCAGGGAGATCCTGCTCCTGTGGACTTGGGCAGCCCAGGCTCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR TCA 90 bp | ATTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGGCTTGTGGGTCTTGCCTGGGAGTTCACGCTGAGCTGTaGGCCCTGGCTCTCCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IPPLPSSLGGRACGSCLGVHAEL*ALALPS Trigger: AGAAGGGAGAGCCAGGGCTCACAGCTCAGCGTGAAC...TCCCAGGCAAGACCCACAAGCCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTGGACACATGTTCTGGGGTCCTCCCAGACATCTaGTGCCCGCTGCCTGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PWSRYAQVQCMGLDTCSGVLPDI*CPLPAA Trigger: GGCAGCAGGCAGCGGGCAGCAGATGTCTGGGAGGAC...CCCAGAACATGTGTCCAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAACATGGCCCCAGAGGATaGAGGGAGCAGGTGCCTGTG | + |
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Preference number: 2 (lower is better) Translates to: SALVATSGVLPIPHPQTEHGPRG*REQVPV Trigger: CACAGGCACCTGCTCCCTGCATCCTCTGGGGCCATG...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGGCAGGTCCTAAGGCAGTCAGTCCAGCCCTTTGGAAGCTAGCAGTGGACATTATGGGCGGCTGGTaGGGACCGTGCCTGCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: ARAGPKAVSPALWKLAVDIMGGW*GPCLPL Trigger: CAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAAT...GTCCACTGCTAGCTTCCAAAGGGCTGGACTGACTGCCTTAGGACCTGCCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGGGAGCAGTGGGCCCTaGGGCTGGAGGCCGAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPGSSGP*GWRPRV Trigger: AACCCTCGGCCTCCAGCCCCAGGGCCCACTGCTCCC...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGCCACATGCGCAGGCTTaGGGGTGGGTGGGGGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRPHAQA*GWVGVG Trigger: CCCCACCCCCACCCACCCCCAAGCCTGCGCATGTGG...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | CCATGGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTGGACACATGTTCTGGGCTGCCTGCTGCCAGTTaGCGACCGTGGCTGACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PWSRYAQVQCMGLDTCSGLPAAS*RPWLTA Trigger: TGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAG...CCCAGAACATGTGTCCAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAAGGGAGTCAGGGTCTGTaGGTGCCTGCAAGTCCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SALVATSGVLPIPHPQTEGSQGL*VPASPL Trigger: TAGGGGACTTGCAGGCACCCACAGACCCTGACTCCC...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CAA 90 bp | TGCTTCTCTTGCTTCCTGGGCTGCATCCCTGCAGCTCTGCCCTGGTaGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAAT | + |
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Preference number: 2 (lower is better) Translates to: CFSCFLGCIPAALPW*PPVVYFPSPTLRQN Trigger: ATTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGAGCTGCAGGGATGCAGCCCAGGAAGCAAGAGAAGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTCAGGGTCTGTGGGTGCCTGCAAGTCCCCTACTTCCTGCTTGAGTTATCCCGGTGGGGACCGTGCCTaGCTTTGTCCTCCCAGACAT | + |
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Preference number: 2 (lower is better) Translates to: ESGSVGACKSPTSCLSYPGGDRA*LCPPRH Trigger: ATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACC...GGGATAACTCAAGCAGGAAGTAGGGGACTTGCAGGCACCCACAGACCCTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGTTGCGCCTGTCCATCTaGCCCTGTGCACTAGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: SVESAVGSSLNSCSEQDLLRLSI*PCALGP Trigger: GGGCCCTAGTGCACAGGGCCAGATGGACAGGCGCAA...CAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGCACGGGGAGCCCTTCTaGGGGATCCAATCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SVESAVGSSLNSCSEQDLHGEPF*GIQSPP Trigger: AGGAGGAGATTGGATCCCTCAGAAGGGCTCCCCGTG...CAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGTGCGGCATGGGATCATaGAGGAGGCTCCAAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: RQYGQFMRRAVTSRPLEWCGMGS*RRLQDL Trigger: CAGATCTTGGAGCCTCCTTCATGATCCCATGCCGCA...CCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTGGGACCTGAACACTTGAGTTGGAGACAGCCACAGAGAACTCGGGAACTCGGCCACCCCTGTCCTTaGGCCTGTCCATCTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ILGPEHLSWRQPQRTRELGHPCP*ACPSGP Trigger: AGGGCCAGATGGACAGGCGCAAGGACAGGGGTGGCC...GAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATGATCTGCCCGCTGCCTGCTaGCAGTTGGCGACCGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: TSLSIWLPTKPSQSGPNDLPAAC*QLATVA Trigger: AGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAG...ATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | GAGTCAGGGTCTGTGGGTGCCTGCAAGTCCCCTACTTCCTGCTTGAGTTATCCCACAGAACAGAGGCACTaGAGGACAGGGGCCCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: ESGSVGACKSPTSCLSYPTEQRH*RTGAQE Trigger: TTCCTGGGCCCCTGTCCTGCAGTGCCTCTGTTCTGT...GGGATAACTCAAGCAGGAAGTAGGGGACTTGCAGGCACCCACAGACCCTGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTAGCCTTCAGCAGTCCTaGCTGACCCAAGCGGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPSLQQS*LTQAVA Trigger: GGCCACCGCTTGGGTCAGCCAGGACTGCTGAAGGCT...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAATCAATTATGGGCGGCTaGTGGGGACCGTGCCTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKSIMGG*WGPCLP Trigger: AGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGA...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAAAAAGGCCATCAATTATaGGCGGCTGGTGGGGACCGT | + |
|
Preference number: 2 (lower is better) Translates to: SALVATSGVLPIPHPQTEKGHQL*AAGGDR Trigger: ACGGTCCCCACCAGCCGCCCATAATTGATGGCCTTT...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGTGGGCCCTGGGGCTaGAGGCCGAGGGTTGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGSGPWG*RPRVGG Trigger: CCCTCCAACCCTCGGCCTCCAGCCCCAGGGCCCACT...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | AGGCAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGCATGTAAGCACACCATaGCCCCAGAGGATGCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: RQYGQFMRRAVTSRPLEWHVSTP*PQRMQG Trigger: TCCCTGCATCCTCTGGGGCCATGGTGTGCTTACATG...CCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATGATGTCCATCTGGCCCTGTaGACTAGGGCCCCAGCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: TSLSIWLPTKPSQSGPNDVHLAL*TRAPAA Trigger: GGCAGCTGGGGCCCTAGTGCACAGGGCCAGATGGAC...ATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACCTCCCAGACATCTGCTaGCCGCTGCCTGCTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: WAEPKKAQYQSIMARQDNLPDIC*PLPAAS Trigger: ACTGGCAGCAGGCAGCGGGCAGCAGATGTCTGGGAG...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAACTTGCATCTTCACACTaGTCCTCAAGGCCCTACGAG | + |
|
Preference number: 2 (lower is better) Translates to: SALVATSGVLPIPHPQTELASSH*SSRPYE Trigger: CTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAG...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 90 bp | GTGAAAGGGTCATTCGAGTCCCCTACAGGGGTCGTGACCCACAGGTaGAGAACCACTGGTTTAGAGCCTCCACCATGGTCTAGGTATGCC | + |
|
Preference number: 2 (lower is better) Translates to: VKGSFESPTGVVTHR*RTTGLEPPPWSRYA Trigger: GGCATACCTAGACCATGGTGGAGGCTCTAAACCAGTGGTTCTCAACCTGTGGGTCACGACCCCTGTAGGGGACTCGAATGACCCTTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACTGCTTTCCCTTGGTGTaGGCTGCCACATGCGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: WAEPKKAQYQSIMARQDNCFPLV*AATCAG Trigger: GCCTGCGCATGTGGCAGCTCACACCAAGGGAAAGCA...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | ACACTCACTCACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCAGGAGCAGGATCTCCCTaGTGTCTTCTCTGGCTACTC | + |
|
Preference number: 2 (lower is better) Translates to: TLTHSHAHTWEAAHVSTPGAGSP*CLLWLL Trigger: GAGTAGCCAGAGAAGACACCAGGGAGATCCTGCTCC...TGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTGAGTGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CCA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGCCGAGGGTTGGAGGGTaGAGCACGGAGGTTAGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LYLASSHWSSRPYEGMLLPRVGG*STEVRG Trigger: TCCTCTAACCTCCGTGCTCCACCCTCCAACCCTCGG...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 90 bp | GCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGCATTaGGTTGTAATTTGCCAGCCTCGTTTCTGGCCCCGTTTGCCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: AVGSSLNSCSEQDLH*VVICQPRFWPRLPV Trigger: TACTGGCAAACGGGGCCAGAAACGAGGCTGGCAAATTACAACCAAATGCAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 90 bp | GGCTCCAAGATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTaGCTCGGAACAAGACCTGCATTTGGTTGTAATTTGCCAGCCTCG | + |
|
Preference number: 2 (lower is better) Translates to: GSKICGVSSGLFPQQ*LGTRPAFGCNLPAS Trigger: CGAGGCTGGCAAATTACAACCAAATGCAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGATCTTGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 90 bp | CTCTGTGAGCCCAATGAGGAGTCTAGGAGACCTCTCTACTGTGGCTaGAGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGTCCTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LCEPNEESRRPLYCG*SPYHQSLPSSRSCF Trigger: GAAGCAGGACCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAGAGAGGTCTCCTAGACTCCTCATTGGGCTCACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR TCA 90 bp | ACACTCACTCACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCATTACTCGAGACAGCCTaGATTCAACCAGGAGGCCTA | + |
|
Preference number: 2 (lower is better) Translates to: TLTHSHAHTWEAAHVSTPLLETA*IQPGGL Trigger: TAGGCCTCCTGGTTGAATTCAGGCTGTCTCGAGTAA...TGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTGAGTGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | CTACTGTGGCTTGAGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGTCCTGCTTAACACAGGATTCCAGTaGGGACCCCCATTGGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LLWLESLPSVSSFLKVLLNTGFQ*GPPLEQ Trigger: CTGCTCCAATGGGGGTCCCCACTGGAATCCTGTGTT...AAGCAGGACCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTCTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATGCAAATGCACACACCCAGTCAGGACCCAATaGTTCCCCCTCTCCCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLPSSRSCFILSRCKCTHPVRTQ*FPLSPA Trigger: TGCTGGGGAGAGGGGGAATCATTGGGTCCTGACTGG...GTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATGCAAATGCACACACGCTCAGCCTAAGGGCTaGGATGGGAGACAAGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLPSSRSCFILSRCKCTHAQPKG*DGRQGS Trigger: GCTGCCTTGTCTCCCATCCCAGCCCTTAGGCTGAGC...GTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CAA 90 bp | CTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTaGAAGCAAGACCCTCCAACAGGACATCAAGAAGGAGCTGAATTA | + |
|
Preference number: 2 (lower is better) Translates to: LASSHWSSRPYEGML*KQDPPTGHQEGAEL Trigger: TAATTCAGCTCCTTCTTGATGTCCTGTTGGAGGGTCTTGCTTCAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR TCA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGTGGGACCTGAACACTTaGGTTGGAGACAGCCACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LYLASSHWSSRPYEGMLLWDLNT*VGDSHR Trigger: TCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCA...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTCATTTGGTTGTAATTTaGCAGCCTCGTTTCTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPHLVVI*QPRFWP Trigger: GGGCCAGAAACGAGGCTGGCAAATTACAACCAAATG...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | ACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATGATAGACATGCTTTCCCTTaGTGTGAGCTGCCACATGCG | + |
|
Preference number: 2 (lower is better) Translates to: TSLSIWLPTKPSQSGPNDRHAFP*CELPHA Trigger: CGCATGTGGCAGCTCACACCAAGGGAAAGCATGTCT...ATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTTGGGACCTGAACACTTGAGTTGGAGACAGCCACAGAGAACTCGGGAACTCAGTGGGGACCCCCATTaGAGCAGAAGTTTCCAATTA | + |
|
Preference number: 2 (lower is better) Translates to: ILGPEHLSWRQPQRTRELSGDPH*SRSFQL Trigger: TAATTGGAAACTTCTGCTCCAATGGGGGTCCCCACT...GAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTCAGGGTCTGTGGGTGCCTGCAAGTCCCCTACTTCCTGCTTGAGTTATCCCAGTAGTTTCAAACAATaGAATACGCTAGGCAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: ESGSVGACKSPTSCLSYPSSFKQ*NTLGKL Trigger: CAGTTTGCCTAGCGTATTCCATTGTTTGAAACTACT...GGGATAACTCAAGCAGGAAGTAGGGGACTTGCAGGCACCCACAGACCCTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR-3UTR GCA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGCTTAGCAGATGCAAATaGACACACACACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: LYLASSHWSSRPYEGMLLLSRCK*THTHTH Trigger: GTGTGTGTGTGTGTGTGTGCATTTGCATCTGCTAAG...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR GCA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGTTCATTCTTAGCAGATaGAAATGCACACACACACAC | + |
|
Preference number: 2 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRFILSR*KCTHTH Trigger: GTGTGTGTGTGTGCATTTGCATCTGCTAAGAATGAA...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR TCA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAACTTTGTTTCTAGCCTaGAGAACTTCATTGTCTATC | + |
|
Preference number: 2 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGTLFLA*RTSLSI Trigger: GATAGACAATGAAGTTCTTCAGGCTAGAAACAAAGT...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | TGGCTCCAGACCGGCCACCGTGGCTACCTGCCTCCCTaGTCAGTTCTCTTTCCCGCCAGGGCCACCCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: WLQTGHRGYLPP*SVLFPARATPV Trigger: GACAGGGGTGGCCCTGGCGGGAAAGAGAACTGAGCAGGGAGGCAGGTAGCCACGGTGGCCGGTCTGGAGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | GTGGGGACCGTGCCTGCCTTTGTCCTCCCAGACATCTaGTGCCCGCTGCCTGCTGCCAGTTGGCGACCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGTVPAFVLPDI*CPLPAASWRPW Trigger: CCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | GCTGCCCGCTGCCTGCTGCCAGTTGGCGACCGTGGCTaGCAGCACGTGGGAACAATGAGAGCTGTCTCGACC | + |
|
Preference number: 3 (lower is better) Translates to: AARCLLPVGDRG*QHVGTMRAVST Trigger: GGTCGAGACAGCTCTCATTGTTCCCACGTGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | TGCCTTTGTCCTCCCAGACATCTGCTGCCCGCTGCCTaGTGCCAGTTGGCGACCGTGGCTGACAGCACGTGG | + |
|
Preference number: 3 (lower is better) Translates to: CLCPPRHLLPAA*CQLATVADSTW Trigger: CCACGTGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGCAGATGTCTGGGAGGACAAAGGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | GGCCATCAATTATGGGCGGCTGGTGGGGACCGTGCCTaGCTTTGTCCTCCCAGACATCTGCTGCCCGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GHQLWAAGGDRA*LCPPRHLLPAA Trigger: GGCAGCGGGCAGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGATGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGGGGCCACCCCTGTCCTaGCGCCTGTCCATCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RQYGQFMRRAVTSRPLEWGPPLS*RLSIWP Trigger: GGGCCAGATGGACAGGCGCAAGGACAGGGGTGGCCC...CCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATaGTTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LAAYQTVPVRTQ*FPLSPAALEVG Trigger: CCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | CCAGGACAAAGAGACATGCTTTCCCTTGGTGTGAGCTaGCACATGCGCAGGCTTGGGGGTGGGTGGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGQRDMLSLGVS*HMRRLGGGWGW Trigger: CCACCCCCACCCACCCCCAAGCCTGCGCATGTGGCAGCTCACACCAAGGGAAAGCATGTCTCTTTGTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | CAAAGGCCATCAATTATGGGCGGCTGGTGGGGACCGTaGCTGCCTTTGTCCTCCCAGACATCTGCTGCCCGC | + |
|
Preference number: 3 (lower is better) Translates to: QRPSIMGGWWGP*LPLSSQTSAAR Trigger: GCGGGCAGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGATGGCCTTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | GCTGTCTCGACCCACTTTTTCAGCCTTCAGCAGTCCTaGCTGACCCAAGCGGTGGCCAGAGGTGTGGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: AVSTHFFSLQQS*LTQAVARGVGG Trigger: GCCTCCCACACCTCTGGCCACCGCTTGGGTCAGCCAGGACTGCTGAAGGCTGAAAAAGTGGGTCGAGACAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | ATCTGCTGCCCGCTGCCTGCTGCCAGTTGGCGACCGTaGCTGACAGCACGTGGGAACAATGAGAGCTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ICCPLPAASWRP*LTARGNNESCL Trigger: GAGACAGCTCTCATTGTTCCCACGTGCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGCGGGCAGCAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | TCCAGCTCCGCTGGGGCTGACAAAGGCCATCAATTATaGGCGGCTGGTGGGGACCGTGCCTGCCTTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SSSAGADKGHQL*AAGGDRACLCP Trigger: AGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGATGGCCTTTGTCAGCCCCAGCGGAGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | GACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGTaGGCTGCCACATGCGCAGGCTTGGGGGTGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DHQDKETCFPLV*AATCAGLGVGG Trigger: CCCACCCACCCCCAAGCCTGCGCATGTGGCAGCTCACACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | TCTCGACCCACTTTTTCAGCCTTCAGCAGTCCTGGCTaGCCCAAGCGGTGGCCAGAGGTGTGGGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRPTFSAFSSPG*PKRWPEVWEAE Trigger: CTCTGCCTCCCACACCTCTGGCCACCGCTTGGGTCAGCCAGGACTGCTGAAGGCTGAAAAAGTGGGTCGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | GGAGAGGCTCTGTCCCGGGGAGTCAGGGTCTGTGGGTaGCTGCAAGTCCCCTACTTCCTGCTTGAGTTATCC | + |
|
Preference number: 3 (lower is better) Translates to: GEALSRGVRVCG*LQVPYFLLELS Trigger: GGATAACTCAAGCAGGAAGTAGGGGACTTGCAGGCACCCACAGACCCTGACTCCCCGGGACAGAGCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | CTCCTCGAAGAGCCAGTCAGAGGTTTCCCAACATGGTaGCAGGCAGCTGAGGGACATCATGCCACGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLEEPVRGFPTW*QAAEGHHATGR Trigger: CCTGCCCGTGGCATGATGTCCCTCAGCTGCCTGGCACCATGTTGGGAAACCTCTGACTGGCTCTTCGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | CGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTaGTGTGAGCTGCCACATGCGCAGGCTTGGGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVTTRTKRHAFP*CELPHAQAWGW Trigger: CCACCCCCAAGCCTGCGCATGTGGCAGCTCACACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | GCCAGGGCAGGTCCTAAGGCAGTCAGTCCAGCCCTTTaGAAGCTAGCAGTGGACAGAACAGAGGCACTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARAGPKAVSPAL*KLAVDRTEALQ Trigger: CTGCAGTGCCTCTGTTCTGTCCACTGCTAGCTTCCAAAGGGCTGGACTGACTGCCTTAGGACCTGCCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | TTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATaGAAGGGGTCGGCGCGAGCAGGGTTGGCCCATAGC | + |
|
Preference number: 3 (lower is better) Translates to: FGFSWEAGYTGR*KGSARAGLAHS Trigger: GCTATGGGCCAACCCTGCTCGCGCCGACCCCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGGCTGCCTGCTGCCAGTaGGCGACCGTGGCTGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRAACCQ*ATVADS Trigger: GCTGTCAGCCACGGTCGCCAACTGGCAGCAGGCAGC...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCTGGCTCAGTGAGGCTCCAGATAGATCTTCTGGGGCCAGTGCCCTGAGCCCTCTCTACTGTGGCTaGAGTCCCTACCATCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: PSWLSEAPDRSSGASALSPLYCG*SPYHQS Trigger: AGACTGATGGTAGGGACTCAAGCCACAGTAGAGAGG...GCTCAGGGCACTGGCCCCAGAAGATCTATCTGGAGCCTCACTGAGCCAGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAAGGACCGTGCCTGCCTTaGTCCTCCCAGACATCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKGPCLP*SSQTSA Trigger: AGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCC...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAAAGTCAGTCCAGCCCTTaGGAAGCTAGCAGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SALVATSGVLPIPHPQTESQSSP*EASSGQ Trigger: CTGTCCACTGCTAGCTTCCAAAGGGCTGGACTGACT...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | GCTTGTGGGTCTTGCCTGGGATGCGGCATGGGATCATaGAGGAGGCTCCAAGATCTGTGGAGTCAGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ACGSCLGCGMGS*RRLQDLWSQQW Trigger: CCACTGCTGACTCCACAGATCTTGGAGCCTCCTTCATGATCCCATGCCGCATCCCAGGCAAGACCCACAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | GGCCTCCTCCTCCTCCCTAGCCTTTATAGAAGTGGTTaGTCCCTGGGACCAGAGCCTCCCAAGAAACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GLLLLPSLYRSG*SLGPEPPKKPG Trigger: TCCTGGTTTCTTGGGAGGCTCTGGTCCCAGGGAGCAACCACTTCTATAAAGGCTAGGGAGGAGGAGGAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | TCAGGGTCTGTGGGTGCCTGCAAGTCCCCTACTTCCTaGTTGAGTTATCCCCCACAGGAAGGTGCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGSVGACKSPTS*LSYPPQEGAQP Trigger: AGGCTGAGCACCTTCCTGTGGGGGATAACTCAAGCAGGAAGTAGGGGACTTGCAGGCACCCACAGACCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAAGTCGTGACCCACAGGTaGAGAACCACTGGTTTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SALVATSGVLPIPHPQTEVVTHR*RTTGLE Trigger: CTCTAAACCAGTGGTTCTCAACCTGTGGGTCACGAC...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | TCATCAGAGGCAGGCTTTGATAGGCCGTTCCTCCCGCAGCAGGAGAGGCTCTGTTTCAGAGGCCCCATCTaGGGACCTGAACACTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SSEAGFDRPFLPQQERLCFRGPI*GPEHLS Trigger: ACTCAAGTGTTCAGGTCCCAAGATGGGGCCTCTGAA...ACAGAGCCTCTCCTGCTGCGGGAGGAACGGCCTATCAAAGCCTGCCTCTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CAGTTGGCGACCGTGGCTGACAGCACGTGGGAACAATaGGAGCTGTCTCGACCCACTTTTTCAGCCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QLATVADSTWEQ*ELSRPTFSAFS Trigger: GCTGAAGGCTGAAAAAGTGGGTCGAGACAGCTCTCATTGTTCCCACGTGCTGTCAGCCACGGTCGCCAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CTCAGCAGCCCTCTTCAGAGGCCCCATCTTGGGACCTaGACACTTGAGTTGGAGACAGCCACAGAGAACTCG | + |
|
Preference number: 3 (lower is better) Translates to: LSSPLQRPHLGT*TLELETATENS Trigger: CGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGATGGGGCCTCTGAAGAGGGCTGCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTaGAGCAAGACCCTCCAACAGGACATCAAGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: HTGPQGPTRACS*SKTLQQDIKKE Trigger: CTCCTTCTTGATGTCCTGTTGGAGGGTCTTGCTTCAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | GTGAGGCTCCAGATAGATCTTCTGGGGCCAGTGCCCTaGGCAGAGGAGAATTCTAGTCTCTCCAACCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: VRLQIDLLGPVP*AEENSSLSNPP Trigger: AGGTGGGTTGGAGAGACTAGAATTCTCCTCTGCTCAGGGCACTGGCCCCAGAAGATCTATCTGGAGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | GGCCCAGGAACACAGGATTCCAGTGGGGACCCCCATTaGAGCAGAAGTTTCCAATTACTAGCTGGCTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GPGTQDSSGDPH*SRSFQLLAGYW Trigger: CCAGTAGCCAGCTAGTAATTGGAAACTTCTGCTCCAATGGGGGTCCCCACTGGAATCCTGTGTTCCTGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | CACAGGTTGAGAACCACTGGTTTAGAGCCTCCACCATaGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: HRLRTTGLEPPP*SRYAQVQCMGL Trigger: CAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGGTGGAGGCTCTAAACCAGTGGTTCTCAACCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | TTCAGAGGCCCCATCTTGGGACCTGAACACTTGAGTTaGAGACAGCCACAGAGAACTCGGGAACTCTCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FRGPILGPEHLS*RQPQRTRELSL Trigger: GAGGGAGAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGATGGGGCCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGGGTGGAAGGGGTTGGTaGTCCAGGGGAGTTCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRGGRGW*SRGVQE Trigger: CTCTTGAACTCCCCTGGACAACCAACCCCTTCCACC...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CCAGGAGGCCTACAGAGCAGTGGTTCTCAACCTCCCTaGTGCTGCAACCCTTTAATCTTCCTCATGCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: PGGLQSSGSQPP*CCNPLIFLMQW Trigger: CCACTGCATGAGGAAGATTAAAGGGTTGCAGCATCAGGGAGGTTGAGAACCACTGCTCTGTAGGCCTCCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTaGGTGGAAAACAAGGACCAACTTGTCCTGACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PVHEEGSDQQAT*VENKDQLVLTG Trigger: ACCTGTCAGGACAAGTTGGTCCTTGTTTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAATCTTCTACACAGTGTTaGGAAGCCACTGTGTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKSSTQC*EATVWS Trigger: GCTCCACACAGTGGCTTCCAAACACTGTGTAGAAGA...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | GCCACAGAGAACTCGGGAACTCTCCCTCCTCCACCCTaGTCGCTTTCTACTCTTCTAGACTTGGGACAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ATENSGTLPPPP*SLSTLLDLGQL Trigger: TAACTGTCCCAAGTCTAGAAGAGTAGAAAGCGATCAGGGTGGAGGAGGGAGAGTTCCCGAGTTCTCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | GAAGCAAGACCCTCCAACAGGACATCAAGAAGGAGCTaGATTAGGCCCATGGTGCCCACAAAGCCATGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: EARPSNRTSRRS*IRPMVPTKPWS Trigger: AGACCATGGCTTTGTGGGCACCATGGGCCTAATTCAGCTCCTTCTTGATGTCCTGTTGGAGGGTCTTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | ACAGGACATCAAGAAGGAGCTGAATTAGGCCCATGGTaGCCACAAAGCCATGGTCTCTGCCTCTTTAGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGHQEGAELGPW*PQSHGLCLFRG Trigger: TCCCCTAAAGAGGCAGAGACCATGGCTTTGTGGGCACCATGGGCCTAATTCAGCTCCTTCTTGATGTCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | TCCTCCTCCCTAGCCTTTATAGAAGTGGTTGCTCCCTaGGACCAGAGCCTCCCAAGAAACCAGGACTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSLAFIEVVAP*DQSLPRNQDFV Trigger: AACAAAGTCCTGGTTTCTTGGGAGGCTCTGGTCCCAGGGAGCAACCACTTCTATAAAGGCTAGGGAGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | ATTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGGCTTGTGGGTCTTGCCTGGGATCTAGGGCATTTTCATaGAGGAAAAGAGACTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IPPLPSSLGGRACGSCLGSRAFS*RKRDFK Trigger: TTTGAAGTCTCTTTTCCTCAATGAAAATGCCCTAGA...TCCCAGGCAAGACCCACAAGCCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | ACACTCACTCACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCATCTACTCTTCTAGACTaGGGACAGTTAGGAGAAACC | + |
|
Preference number: 3 (lower is better) Translates to: TLTHSHAHTWEAAHVSTPSTLLD*GQLGET Trigger: GGTTTCTCCTAACTGTCCCAAGTCTAGAAGAGTAGA...TGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTGAGTGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR-3UTR CAA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGAGGTTCCCCATGGTaGGTGGAAGGGGTTGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGRGSPW*VEGVGC Trigger: ACAACCAACCCCTTCCACCAACCATGGGGAACCTCT...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | CCAATGAGGAGTCTAGGAGACCTCTCTACTGTGGCTTaGGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PMRSLGDLSTVA*VPTISLFLPQG Trigger: ACCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAGAGAGGTCTCCTAGACTCCTCATTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CCA 72 bp | ACTAGCTCTTCTACACAGTGTTTGGAAGCCACTGTGTaGAGCCTACTCTGTGAGCCCAATGAGGAGTCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: TSSSTQCLEATV*SLLCEPNEESR Trigger: CCTAGACTCCTCATTGGGCTCACAGAGTAGGCTCCACACAGTGGCTTCCAAACACTGTGTAGAAGAGCTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | AGTTGCTCGGAACAAGACCTGCATTTGGTTGTAATTTaGCAGCCTCGTTTCTGGCCCCGTTTGCCAGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: SCSEQDLHLVVI*QPRFWPRLPVT Trigger: TGTTACTGGCAAACGGGGCCAGAAACGAGGCTGGCAAATTACAACCAAATGCAGGTCTTGTTCCGAGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | TCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTaGTCGGAACAAGACCTGCATTTGGTTGTAATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SVESAVGSSLNS*SEQDLHLVVIC Trigger: GCAAATTACAACCAAATGCAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | ATCAGAGCATCATGGCCAGACAGGACAACACAAGTTTaGGAGAGGCTTTGCCTCCTGTTCATTCATCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IRASWPDRTTQV*ERLCLLFIHQR Trigger: CCTCTGATGAATGAACAGGAGGCAAAGCCTCTCTCAAACTTGTGTTGTCCTGTCTGGCCATGATGCTCTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | CTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATaGAAATGCACACACACACACACACACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: LPSSRSCFILSR*KCTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR GCA 72 bp | AGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGTCCTaGTTCATTCTTAGCAGATGCAAATGCACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: SPYHQSLPSSRS*FILSRCKCTHT Trigger: TGTGTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGACTGATGGTAGGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR TCA 72 bp | AGAGCCTCCCAAGAAACCAGGACTTTGTTTCTAGCCTaGAGAACTTCATTGTCTATCTGGCTGCCTACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RASQETRTLFLA*RTSLSIWLPTK Trigger: TTTGGTAGGCAGCCAGATAGACAATGAAGTTCTTCAGGCTAGAAACAAAGTCCTGGTTTCTTGGGAGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | GGAAGGGGTCGGCGCGAGCAGGGTTGGCCCATAGCTTaGGCGGCAATCTCCAGACCCTGCTCCAGGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GRGRREQGWPIA*AAISRPCSREV Trigger: TACCTCCCTGGAGCAGGGTCTGGAGATTGCCGCCAAAGCTATGGGCCAACCCTGCTCGCGCCGACCCCTTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | TCAATTATGGGCGGCTGGTGGGGACCGTGCCTGCCTTaGTCCTCCCAGACATCTGCTGCCCGCTGCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SIMGGWWGPCLP*SSQTSAARCLL Trigger: CAGCAGGCAGCGGGCAGCAGATGTCTGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | ATTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGGCTTGTGGGTCTTGCCTGGGATCTCCTGGGAGCGGCTaGTTCCTGCCTCAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPPLPSSLGGRACGSCLGSPGSG*FLPQRR Trigger: CCTCCTCTGAGGCAGGAAGCAGCCGCTCCCAGGAGA...TCCCAGGCAAGACCCACAAGCCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGGCTCAGTGAGGCTCCAGATAGATCTTCTGGGGCCAGTGCCCTGAGCCGGCCTTCTGGTAGATaGTCCGCACGATCTCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSWLSEAPDRSSGASALSRPSGR*SARSPP Trigger: TGGGGGAGATCGTGCGGACCATCTACCAGAAGGCCG...GCTCAGGGCACTGGCCCCAGAAGATCTATCTGGAGCCTCACTGAGCCAGCTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | AGGCAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAGGGCTCGCCAGTGCTaGTCCGCATGGTGCCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RQYGQFMRRAVTSRPLEWRARQC*SAWCRT Trigger: TGTTCGGCACCATGCGGAGCAGCACTGGCGAGCCCT...CCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAGCCTGGGCTGCCCAAGTCCACAGGAGCAGGATCTCCCTGGTGTCTTCTCGCGGGGCTCGCCCTCTaGAGAAGGAACAGCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CEPGLPKSTGAGSPWCLLAGLAL*RRNSYH Trigger: ATGGTAGCTGTTCCTTCTCCAGAGGGCGAGCCCCGC...GAGAAGACACCAGGGAGATCCTGCTCCTGTGGACTTGGGCAGCCCAGGCTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAGCCTGGGCTGCCCAAGTCCACAGGAGCAGGATCTCCCTGGTGTCTTCTCTTGGCACTGCCTGGCTaGTGGTCACCATGCTGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CEPGLPKSTGAGSPWCLLLALPG*WSPCCW Trigger: CCAACAGCATGGTGACCATCAGCCAGGCAGTGCCAA...GAGAAGACACCAGGGAGATCCTGCTCCTGTGGACTTGGGCAGCCCAGGCTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAATGGTCCCCTCGACCATaGAGAGGGCCATCTTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SALVATSGVLPIPHPQTEWSPRP*RGPSCR Trigger: GCGACAAGATGGCCCTCTTCATGGTCGAGGGGACCA...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | ACACTCACTCACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCATGGCGTGGAGCTCGATaGCCTCCAGGAGCAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLTHSHAHTWEAAHVSTPWRGAR*PPGAGT Trigger: GGTCCCTGCTCCTGGAGGTCATCGAGCTCCACGCCA...TGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTGAGTGAGTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | AGGCAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGGGCTGCTTGGGTGTGTaGCGGACCTTCCGATGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQYGQFMRRAVTSRPLEWGCLGV*RTFRWN Trigger: GTTCCATCGGAAGGTCCGCCACACACCCAAGCAGCC...CCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | CCCAGCTGGCTCAGTGAGGCTCCAGATAGATCTTCTGGGGCCAGTGCCCTGAGCGCATCTCCTCAGAGTTaGTGGAGTTCTGCGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSWLSEAPDRSSGASALSASPQS*WSSAPP Trigger: AGGAGGCGCAGAACTCCACCAACTCTGAGGAGATGC...GCTCAGGGCACTGGCCCCAGAAGATCTATCTGGAGCCTCACTGAGCCAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | ATTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGGCTTGTGGGTCTTGCCTGGGACCCAGGTGGCACCACTaGAGGAATCAAAGGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: IPPLPSSLGGRACGSCLGPRWHH*RNQRYW Trigger: CCAATACCTTTGATTCCTTCAGTGGTGCCACCTGGG...TCCCAGGCAAGACCCACAAGCCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | ACACTCACTCACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCATCGGTCAGCAGCCCCTaGACCTGGTACTCCAGCACG | + |
|
Preference number: 4 (lower is better) Translates to: TLTHSHAHTWEAAHVSTPSVSSP*TWYSST Trigger: CGTGCTGGAGTACCAGGTGCAGGGGCTGCTGACCGA...TGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTGAGTGAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | ACACTCACTCACTCACACGCTCACACCTGGGAAGCAGCCCATGTAAGCACACCAATGTGTGGCAGGGGCTaGTTGGGTGTGTGGCGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TLTHSHAHTWEAAHVSTPMCGRG*LGVWRT Trigger: GGTCCGCCACACACCCAAGCAGCCCCTGCCACACAT...TGGTGTGCTTACATGGGCTGCTTCCCAGGTGTGAGCGTGTGAGTGAGTGAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTGGACACATGTTCTGGGCGCTCCACATCCTGTTaGTGCAGCTCCTCCCGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PWSRYAQVQCMGLDTCSGRSTSC*CSSSRT Trigger: TGTGCGGGAGGAGCTGCAGCAACAGGATGTGGAGCG...CCCAGAACATGTGTCCAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGGTGGCAGGGGCTGCTTaGGTGTGTGGCGGACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KRARTGDHQDKETCFPLVVAGAA*VCGGPS Trigger: GGAAGGTCCGCCACACACCCAAGCAGCCCCTGCCAC...CACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGGGCAGGTCCTAAGGCAGTCAGTCCAGCCCTTTGGAAGCTAGCAGTGGACTCCGATGGAACTGGGTaGAGTCCAGCTTTTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARAGPKAVSPALWKLAVDSDGTG*SPAFQA Trigger: AGCCTGAAAAGCTGGACTTCACCCAGTTCCATCGGA...GTCCACTGCTAGCTTCCAAAGGGCTGGACTGACTGCCTTAGGACCTGCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | TCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGCATCCAGCTGCTCTCTaGAGTCAGCCGTCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVESAVGSSLNSCSEQDLHPAAL*SQPSTG Trigger: CCCAGTGGACGGCTGACTGCAGAGAGCAGCTGGATG...CAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CCATGGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTGGACACATGTTCTGGGATCATCTCTGGCAGCTaGTCCTCTAGCAGCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PWSRYAQVQCMGLDTCSGIISGS*SSSSRP Trigger: AGGCCGGCTGCTAGAGGAGCAGCTGCCAGAGATGAT...CCCAGAACATGTGTCCAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGAGCTCCTCGATCTCCTaGGAGCGGCTGCTTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KRARTGDHQDKETCFPLVSSSIS*ERLLPA Trigger: GGCAGGAAGCAGCCGCTCCCAGGAGATCGAGGAGCT...CACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGCAGGTCCTAAGGCAGTCAGTCCAGCCCTTTGGAAGCTAGCAGTGGACTCCCTTGTCTCCCGGTaGATGTTTCATGTTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ARAGPKAVSPALWKLAVDSLVSR*MFHVAV Trigger: CACGGCAACATGAAACATCCACCGGGAGACAAGGGA...GTCCACTGCTAGCTTCCAAAGGGCTGGACTGACTGCCTTAGGACCTGCCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAATTTTGGGCCGCTCCCTaGGACGCTCAGGAAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKFWAAP*DAQEEQ Trigger: CTGTTCTTCCTGAGCGTCTCAGGGAGCGGCCCAAAA...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAAGGGAGTTGTCCTTGTTaGCATTCTGCTGTGGCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKGSCPC*HSAVAG Trigger: CCCCGCCACAGCAGAATGGCAACAAGGACAACTCCC...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAATCCAGCTTTTCAGGCTaGAGGTCCCAGGTGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKSSFSG*RSQVAP Trigger: TGGTGCCACCTGGGACCTGCAGCCTGAAAAGCTGGA...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTGGGACCTGAACACTTGAGTTGGAGACAGCCACAGAGAACTCGGGAACTCGTTGCCATTCTGCTGTaGCGGGGCTCGCCCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILGPEHLSWRQPQRTRELVAILL*RGSPSG Trigger: TCCAGAGGGCGAGCCCCGCCACAGCAGAATGGCAAC...GAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | GGGTCTGTGGGTGCCTGCAAGTCCCCTACTTCCTGCTaGAGTTATCCCCCACAGGAAGGTGCTCAGCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSVGACKSPTSC*SYPPQEGAQPF Trigger: AAAAGGCTGAGCACCTTCCTGTGGGGGATAACTCAAGCAGGAAGTAGGGGACTTGCAGGCACCCACAGACCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | AGGCTTTGCCTCCTGTTCATTCATCAGAGGCAGGCTTaGATAGGCCGTTCCTCCCGCAGCAGGAGAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLCLLFIHQRQA*IGRSSRSRRGS Trigger: AGAGCCTCTCCTGCTGCGGGAGGAACGGCCTATCAAAGCCTGCCTCTGATGAATGAACAGGAGGCAAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | CTACTGTGGCTTGAGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGTCCTGCTTGGCGAAGCTGCGGTCTaGCACGGCCTTCTGGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLWLESLPSVSSFLKVLLGEAAV*HGLLVD Trigger: ATCTACCAGAAGGCCGTGTCAGACCGCAGCTTCGCC...AAGCAGGACCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGAGCTTGGCGGCCGTaGAGGCGAAGCTGCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGRAWRP*RRSCGL Trigger: CAGACCGCAGCTTCGCCTTCACGGCCGCCAAGCTCT...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTCAGCTACCATCCAGCTaGTCTCTGCAGTCAGCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPQLPSS*SLQSAV Trigger: GACGGCTGACTGCAGAGAGCAGCTGGATGGTAGCTG...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGCGGCCCAGATATCTGTaGCCAGCATGTCCAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRARTGDHQDKETCFPLVRPRYL*PACPGS Trigger: ACTCCCTGGACATGCTGGGCACAGATATCTGGGCCG...CACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAATCAGCCTGTCCATCTTaGTTGGCTGAGGGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKSACPS*LAEGCL Trigger: CAAGCAGCCCTCAGCCAAGCAAGATGGACAGGCTGA...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CAATACGGCCAGTTCATGAGGAGGGCAGTGACCAGCAGGCCACTTGAGTGGAAAGAGTTGGTGGAGTTCTaGGCCTCCTCCATGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QYGQFMRRAVTSRPLEWKELVEF*ASSMKE Trigger: CTCCTTCATGGAGGAGGCGCAGAACTCCACCAACTC...TTTCCACTCAAGTGGCCTGCTGGTCACTGCCCTCCTCATGAACTGGCCGTATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | AAGGCCATCAATTATGGGCGGCTGGTGGGGACCGTGCCTGCCTTTGTCCTCCCAACCTTCCGATGGAACTaGGTGAAGTCCAGCTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAINYGRLVGTVPAFVLPTFRWN*VKSSFS Trigger: TGAAAAGCTGGACTTCACCCAGTTCCATCGGAAGGT...TGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGATGGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGTGTAGCCATGGTGTGTaGGCCTCCCTGAGGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LYLASSHWSSRPYEGMLLCSHGV*ASLRGG Trigger: CCCACCCCTCAGGGAGGCCCACACACCATGGCTACA...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | GGGCCCAGGAACACAGGATTCCAGTGGGGACCCCCATaGGAGCAGAAGTTTCCAATTACTAGCTGGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: GPRNTGFQWGPP*EQKFPITSWLL Trigger: CAGTAGCCAGCTAGTAATTGGAAACTTCTGCTCCAATGGGGGTCCCCACTGGAATCCTGTGTTCCTGGGCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | TCATTCGAGTCCCCTACAGGGGTCGTGACCCACAGGTaGAGAACCACTGGTTTAGAGCCTCCACCATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFESPTGVVTHR*RTTGLEPPPWS Trigger: AGACCATGGTGGAGGCTCTAAACCAGTGGTTCTCAACCTGTGGGTCACGACCCCTGTAGGGGACTCGAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACGCACGTAGCTGTCAATaGAGCGCTCCAGCTCCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WAEPKKAQYQSIMARQDNARSCQ*SAPAPR Trigger: TCGAGGAGCTGGAGCGCTTCATTGACAGCTACGTGC...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATGCAAATGCACACACGGAAGGGCTCGCCAGTaGTGCTCCGCATGGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPSSRSCFILSRCKCTHGRARQ*CSAWCR Trigger: TCGGCACCATGCGGAGCAGCACTGGCGAGCCCTTCC...GTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGTTCTCTGTCGATGTGTaGCAGGGGCTGCTTGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KRARTGDHQDKETCFPLVFSVDV*QGLLGC Trigger: ACACCCAAGCAGCCCCTGCCACACATCGACAGAGAA...CACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | CACGTGGGAACAATGAGAGCTGTCTCGACCCACTTTTTCAGCCTTCAGCAGTCCTGGTCACCATGCTGTTaGGGCTTGTTCCCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVGTMRAVSTHFFSLQQSWSPCC*GLFPPG Trigger: TCCAGGAGGGAACAAGCCCCAACAGCATGGTGACCA...GGACTGCTGAAGGCTGAAAAAGTGGGTCGAGACAGCTCTCATTGTTCCCACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGGGTCCCTGTTGTGTTTaGCACTGCCTGGCTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KRARTGDHQDKETCFPLVGPCCV*HCLADG Trigger: ACCATCAGCCAGGCAGTGCCAAACACAACAGGGACC...CACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGGCCGTCTTCAAGTTTaGGGTTCTCAACGGTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPGRLQV*GSQRSR Trigger: CCGTGACCGTTGAGAACCCCAAACTTGAAGACGGCC...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | CCATGGTCTAGGTATGCCCAGGTCCAGTGCATGGGCTTGGACACATGTTCTGGGCTGTCTTTGGAAGACTaGAGCAGGGTGATTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PWSRYAQVQCMGLDTCSGLSLED*SRVILG Trigger: GCCCAAAATCACCCTGCTCCAGTCTTCCAAAGACAG...CCCAGAACATGTGTCCAAGCCCATGCACTGGACCTGGGCATACCTAGACCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTGGGACCTGAACACTTGAGTTGGAGACAGCCACAGAGAACTCGGGAACTCTTCCAGCTGTTGGCGTaGAGCTCGATGACCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILGPEHLSWRQPQRTRELFQLLA*SSMTSR Trigger: CCTGGAGGTCATCGAGCTCCACGCCAACAGCTGGAA...GAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | TCCTTTTTCTCAGCAGCCCTCTTCAGAGGCCCCATCTaGGGACCTGAACACTTGAGTTGGAGACAGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SFFSAALFRGPI*GPEHLSWRQPQ Trigger: CTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGATGGGGCCTCTGAAGAGGGCTGCTGAGAAAAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | TCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTaGAAGCAAGACCCTCCAACAGGACATCAAGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHWSSRPYEGML*KQDPPTGHQEG Trigger: TCCTTCTTGATGTCCTGTTGGAGGGTCTTGCTTCAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGTGTTTCATGTTGCCGTaGTGCCAGCGTCGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRCFMLP*CQRRFW Trigger: CCAGAACCGACGCTGGCATCACGGCAACATGAAACA...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR TCA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACTTCCTTCACATCCTGTaGCTGCAAGAGCTCCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WAEPKKAQYQSIMARQDNFLHIL*LQELPE Trigger: CTCCGGGAGCTCTTGCAGTCACAGGATGTGAAGGAA...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | ACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATGATTGGCGGACCTTCCGATaGAACTGGGTGAAGTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSLSIWLPTKPSQSGPNDWRTFR*NWVKSS Trigger: GCTGGACTTCACCCAGTTCCATCGGAAGGTCCGCCA...ATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGGGGCTTGTTCCCTCCTaGAGGTCTTTGCTGCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LYLASSHWSSRPYEGMLLGLVPS*RSLLPS Trigger: AGACGGCAGCAAAGACCTCCAGGAGGGAACAAGCCC...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACGTGTTTGGCACTGCCTaGCTGATGGTCACCATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAEPKKAQYQSIMARQDNVFGTA*LMVTML Trigger: CAGCATGGTGACCATCAGCCAGGCAGTGCCAAACAC...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGACTGCCACTTCGTCCTaGGGGACATGGGGGACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LYLASSHWSSRPYEGMLLTATSS*GTWGTH Trigger: ATGTGTCCCCCATGTCCCCCAGGACGAAGTGGCAGT...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | CTGACAGCACGTGGGAACAATGAGAGCTGTCTCGACCCACTTTTTCAGCCTTCATCTCCTCAGAGTTGGTaGAGTTCTGCGCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTARGNNESCLDPLFQPSSPQSW*SSAPPP Trigger: TGGAGGAGGCGCAGAACTCCACCAACTCTGAGGAGA...TGAAGGCTGAAAAAGTGGGTCGAGACAGCTCTCATTGTTCCCACGTGCTGTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| 3UTR CAA 72 bp | CCCAATGAGGAGTCTAGGAGACCTCTCTACTGTGGCTaGAGTCCCTACCATCAGTCTCTTCCTTCCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PNEESRRPLYCG*SPYHQSLPSSR Trigger: CCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAGAGAGGTCTCCTAGACTCCTCATTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGGGTATGTGCAATCTCTaGTTCGTGGGGCATCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRGMCNL*FVGHRM Trigger: CATCCGATGCCCCACGAAGCAGAGATTGCACATACC...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGCTGTCAGTTTCTGGATaGTCCTGTTGTAGTACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SVESAVGSSLNSCSEQDLLSVSG*SCCSTA Trigger: CGCAGTACTACAACAGGACCATCCAGAAACTGACAG...CAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | ACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATGATCCTCCTGGAGGTCTTTaGTGCCGTCTTCGGTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLSIWLPTKPSQSGPNDPPGGL*CRLRSF Trigger: AAATGACCGAAGACGGCAGCAAAGACCTCCAGGAGG...ATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR GCA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACAGAACAGCAGAGGACTaGGTCTTCCTTCACATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAEPKKAQYQSIMARQDNRTAED*VFLHIL Trigger: CAGGATGTGAAGGAAGACGCAGTCCTCTGCTGTTCT...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CCA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAGTCCACTGGGAGATATaGGACTGTGTCCTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGVHWEI*DCVLWL Trigger: GAGCCAGAGGACACAGTCCCATATCTCCCAGTGGAC...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR GCA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGATGCTTGGCTGAGGGCTaGTTGTCTCTACTGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGCLAEG*LSLLPL Trigger: AAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAAGCA...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CAA 72 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTaGCTCGGAACAAGACCTGCATTTGGTTGTAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICGVSSGLFPQQ*LGTRPAFGCNL Trigger: CAAATTACAACCAAATGCAGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CAA 72 bp | ATGGCCAGACAGGACAACACAAGTTTGAGAGAGGCTTaGCCTCCTGTTCATTCATCAGAGGCAGGCTTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: MARQDNTSLREA*PPVHSSEAGFD Trigger: ATCAAAGCCTGCCTCTGATGAATGAACAGGAGGCAAAGCCTCTCTCAAACTTGTGTTGTCCTGTCTGGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CCA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTTTCGGAACAACTTCTTaGTATGTGCAATCTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPFGTTS*YVQSLL Trigger: AAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAA...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR TCA 90 bp | AAACCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGACAATGTCATTCAGGCTaGTACCATCTCCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPTCSLGSAGKQDIRVDGQCHSG*YHLHLP Trigger: TGGAAGATGGAGATGGTATCAGCCTGAATGACATTG...TCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| 3UTR CAA 72 bp | TATCAGAGCATCATGGCCAGACAGGACAACACAAGTTaGAGAGAGGCTTTGCCTCCTGTTCATTCATCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: YQSIMARQDNTS*REALPPVHSSE Trigger: CTCTGATGAATGAACAGGAGGCAAAGCCTCTCTCAAACTTGTGTTGTCCTGTCTGGCCATGATGCTCTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR GCA 90 bp | TCTCTTCCTTCCTCAAGGTCCTGCTTCATTCTTAGCAGATGCAAATGCACACACAGAACAGTGTCTTTATaGTTTATCTCAGCCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLPSSRSCFILSRCKCTHRTVSL*FISASG Trigger: GCCGGAGGCTGAGATAAAGCATAAAGACACTGTTCT...GTGTGTGCATTTGCATCTGCTAAGAATGAAGCAGGACCTTGAGGAAGGAAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 90 bp | CGGTCAGCAGCCCCTGCACCTGGTACTCCAGCACGTAGCTGTCAATaGAGCGCTCCAGCTCCTCGATCTCCTGGGAGCGGCTGCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSAAPAPGTPARSCQ*SAPAPRSPGSGCFL Trigger: CAGGAAGCAGCCGCTCCCAGGAGATCGAGGAGCTGGAGCGCTTCATTGACAGCTACGTGCTGGAGTACCAGGTGCAGGGGCTGCTGACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 90 bp | CATCTTGTCGCAGAGCTTGGCGGCCGTGAAGGCGAAGCTGCGGTCTaGCACGGCCTTCTGGTAGATGGTCCGCACGATCTCCCCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HLVAELGGREGEAAV*HGLLVDGPHDLPQH Trigger: ATGCTGGGGGAGATCGTGCGGACCATCTACCAGAAGGCCGTGTCAGACCGCAGCTTCGCCTTCACGGCCGCCAAGCTCTGCGACAAGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | TCTCTGCAGTCAGCCGTCCACTGGGAGATATGGGACTGTGTCCTCTaGCTCTCGCCGTCACCCTCTGTCTTGTCGGTCAGCAGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLQSAVHWEIWDCVL*LSPSPSVLSVSSPC Trigger: GCAGGGGCTGCTGACCGACAAGACAGAGGGTGACGGCGAGAGCCAGAGGACACAGTCCCATATCTCCCAGTGGACGGCTGACTGCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | GCTCAAGGCCACTGTGTCCGGTGTCCCCTGGGCCGTCTTCAAGTTTaGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTGCGGTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AQGHCVRCPLGRLQV*GSQRSRSLWRCGGC Trigger: GCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGAAGACGGCCCAGGGGACACCGGACACAGTGGCCTTGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | ATTCCCCCTCTCCCCAGCAGCCTTGGAGGTAGGGCTTGTGGGTCTTGCCTGGGAATCTTGTCGCAGAGCTaGGCGGCCGTGAAGGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IPPLPSSLGGRACGSCLGILSQS*AAVKAK Trigger: CTTCGCCTTCACGGCCGCCAAGCTCTGCGACAAGAT...TCCCAGGCAAGACCCACAAGCCCTACCTCCAAGGCTGCTGGGGAGAGGGGGAAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | TGTGGCGGGGCTCGCCCTCTGGAGAAGGAACAGCTACCATCCAGCTaGTCTCTGCAGTCAGCCGTCCACTGGGAGATATGGGACTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CGGARPLEKEQLPSS*SLQSAVHWEIWDCV Trigger: GACACAGTCCCATATCTCCCAGTGGACGGCTGACTGCAGAGAGCAGCTGGATGGTAGCTGTTCCTTCTCCAGAGGGCGAGCCCCGCCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | GGTGGCTGCCCGCTTCTCCCTTGTCTCCCGGTGGATGTTTCATGTTaGCGTGATGCCAGCGTCGGTTCTGGCTGTAGCCATGGTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGCPLLPCLPVDVSC*RDASVGSGCSHGVW Trigger: CCACACACCATGGCTACAGCCAGAACCGACGCTGGCATCACGGCAACATGAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | GGGAGTTGTCCTTGTTGCCATTCTGCTGTGGCGGGGCTCGCCCTCTaGAGAAGGAACAGCTACCATCCAGCTGCTCTCTGCAGTCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GSCPCCHSAVAGLAL*RRNSYHPAALCSQP Trigger: CGGCTGACTGCAGAGAGCAGCTGGATGGTAGCTGTTCCTTCTCCAGAGGGCGAGCCCCGCCACAGCAGAATGGCAACAAGGACAACTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | AAGGCCATCAATTATGGGCGGCTGGTGGGGACCGTGCCTGCCTTTGTCCTCCCAAGAGGGTTCCAGCTGTaGGCGTGGAGCTCGATGACC | + |
|
Preference number: 5 (lower is better) Translates to: KAINYGRLVGTVPAFVLPRGFQL*AWSSMT Trigger: GGTCATCGAGCTCCACGCCAACAGCTGGAACCCTCT...TGGGAGGACAAAGGCAGGCACGGTCCCCACCAGCCGCCCATAATTGATGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | GCCAGGGCAGGTCCTAAGGCAGTCAGTCCAGCCCTTTGGAAGCTAGCAGTGGACTCCTTCTGGAGCATGTaGAGGAGCAGGCTCCGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARAGPKAVSPALWKLAVDSFWSM*RSRLRN Trigger: GTTCCGGAGCCTGCTCCTCAACATGCTCCAGAAGGA...GTCCACTGCTAGCTTCCAAAGGGCTGGACTGACTGCCTTAGGACCTGCCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | AGCTTTCCCTTTCCACACCCTTCTCTGTCGATGTGTGGCAGGGGCTaGTTGGGTGTGTGGCGGACCTTCCGATGGAACTGGGTGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFPFPHPSLSMCGRG*LGVWRTFRWNWVKS Trigger: GGACTTCACCCAGTTCCATCGGAAGGTCCGCCACACACCCAAGCAGCCCCTGCCACACATCGACAGAGAAGGGTGTGGAAAGGGAAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | GTTTGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTGCGGTGGCTaGCCGCTTCTCCCTTGTCTCCCGGTGGATGTTTCATGTTGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: VWGSQRSRSLWRCGG*PLLPCLPVDVSCCR Trigger: ACGGCAACATGAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | AAGGAACAGCTACCATCCAGCTGCTCTCTGCAGTCAGCCGTCCACTaGGAGATATGGGACTGTGTCCTCTGGCTCTCGCCGTCACCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEQLPSSCSLQSAVH*EIWDCVLWLSPSPS Trigger: AGAGGGTGACGGCGAGAGCCAGAGGACACAGTCCCATATCTCCCAGTGGACGGCTGACTGCAGAGAGCAGCTGGATGGTAGCTGTTCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | AAGAGAGCAAGGACGGGTGACCACCAGGACAAAGAGACATGCTTTCCCTTGGTGCCGTCACCCTCTGTCTaGTCGGTCAGCAGCCCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KRARTGDHQDKETCFPLVPSPSV*SVSSPC Trigger: GCAGGGGCTGCTGACCGACAAGACAGAGGGTGACGG...CACCAAGGGAAAGCATGTCTCTTTGTCCTGGTGGTCACCCGTCCTTGCTCTCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | CACGTGGGAACAATGAGAGCTGTCTCGACCCACTTTTTCAGCCTTCAGCAGTCCTGTGGCAGGGGCTGCTaGGGTGTGTGGCGGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HVGTMRAVSTHFFSLQQSCGRGC*GVWRTF Trigger: GAAGGTCCGCCACACACCCAAGCAGCCCCTGCCACA...GGACTGCTGAAGGCTGAAAAAGTGGGTCGAGACAGCTCTCATTGTTCCCACGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAAATGGTCACCATGCTGTaGGGGCTTGTTCCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SALVATSGVLPIPHPQTEMVTML*GLVPSW Trigger: CCAGGAGGGAACAAGCCCCAACAGCATGGTGACCAT...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | CGTCTTCAAGTTTGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTaGGGTGGCTGCCCGCTTCTCCCTTGTCTCCCGGTGGATGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RLQVWGSQRSRSLWR*GGCPLLPCLPVDVS Trigger: TGAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGAAGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | CGGTCCTTTTCCTTCAGCCTTCGCCTCAGCCTGTCTTTGGAAGACTaGAGCAGGGTGATTTTGGGCCGCTCCCTGAGACGCTCAGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSFSFSLRLSLSLED*SRVILGRSLRRSGR Trigger: TCTTCCTGAGCGTCTCAGGGAGCGGCCCAAAATCACCCTGCTCCAGTCTTCCAAAGACAGGCTGAGGCGAAGGCTGAAGGAAAAGGACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | TCTGCCCTGGTTGCCACCAGTGGTGTACTTCCCATCCCCCACCCTCAGACAGAATTGGCTGAGGGCTGCTaGTCTCTACTGCCACTTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SALVATSGVLPIPHPQTELAEGC*SLLPLR Trigger: ACGAAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAA...TTCTGTCTGAGGGTGGGGGATGGGAAGTACACCACTGGTGGCAACCAGGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | ACTGCCTGGCTGATGGTCACCATGCTGTTGGGGCTTGTTCCCTCCTaGAGGTCTTTGCTGCCGTCTTCGGTCATTTCTCCTCCTTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TAWLMVTMLLGLVPS*RSLLPSSVISPPSE Trigger: TTCCGAAGGAGGAGAAATGACCGAAGACGGCAGCAAAGACCTCCAGGAGGGAACAAGCCCCAACAGCATGGTGACCATCAGCCAGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | TCAAGTTTGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTGCGGTaGCTGCCCGCTTCTCCCTTGTCTCCCGGTGGATGTTTCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSLGFSTVTVSLALR*LPASPLSPGGCFML Trigger: CAACATGAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | GGGTTAGCATGGACTCTGAGGGGCACAGCATCTTATCTCTTGCGCTaGCTAGGAGCTCCGTCATCATCTCTGGCAGCTGCTCCTCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GLAWTLRGTASYLLR*LGAPSSSLAAAPLA Trigger: TGCTAGAGGAGCAGCTGCCAGAGATGATGACGGAGCTCCTAGCCAGCGCAAGAGATAAGATGCTGTGCCCCTCAGAGTCCATGCTAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | GTCATTTCTCCTCCTTCGGAACAACTTCTTGGTATGTGCAATCTCTaGTTCGTGGGGCATCGGATGGTAGCCCTGCCAGGTCGGGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VISPPSEQLLGMCNL*FVGHRMVALPGRED Trigger: GTCCTCCCGACCTGGCAGGGCTACCATCCGATGCCCCACGAAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAGGAGGAGAAATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | TTATCTCTTGCGCTGGCTAGGAGCTCCGTCATCATCTCTGGCAGCTaGTCCTCTAGCAGCCGGCCTGTGCTTTGTAGCTCCATAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLALARSSVIISGS*SSSSRPVLCSSIEQ Trigger: CTGTTCTATGGAGCTACAAAGCACAGGCCGGCTGCTAGAGGAGCAGCTGCCAGAGATGATGACGGAGCTCCTAGCCAGCGCAAGAGATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | ATCTGTGGAGTCAGCAGTGGGCTCTTCCCTCAACAGTTGCTCGGAACAAGACCTGCCTGTCCATCTTGCTaGGCTGAGGGCTGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: ICGVSSGLFPQQLLGTRPACPSC*AEGCLS Trigger: AGACAAGCAGCCCTCAGCCAAGCAAGATGGACAGGC...AGGTCTTGTTCCGAGCAACTGTTGAGGGAAGAGCCCACTGCTGACTCCACAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | ATCTTGGGACCTGAACACTTGAGTTGGAGACAGCCACAGAGAACTCGGGAACTCATGAAGAGGGCCATCTaGTCGCAGAGCTTGGCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ILGPEHLSWRQPQRTRELMKRAI*SQSLAA Trigger: GGCCGCCAAGCTCTGCGACAAGATGGCCCTCTTCAT...GAGTTCCCGAGTTCTCTGTGGCTGTCTCCAACTCAAGTGTTCAGGTCCCAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 90 bp | GGTAGCCCTGCCAGGTCGGGAGGACCTTCTCAATGTCATTCAGGCTaGTACCATCTCCATCTTCCAGCTTTCCCTTTCCACACCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPARSGGPSQCHSG*YHLHLPAFPFHTLL Trigger: GAGAAGGGTGTGGAAAGGGAAAGCTGGAAGATGGAGATGGTATCAGCCTGAATGACATTGAGAAGGTCCTCCCGACCTGGCAGGGCTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 90 bp | CTCATGCTGTTAAGGATTTCCATCAGCCTGTCCATCTTGCTTGGCTaGGGGCTGCTTGTCTCTACTGCCACTTCGTCCTGGGGGACATGG | + |
|
Preference number: 5 (lower is better) Translates to: LMLLRISISLSILLG*GLLVSTATSSWGTW Trigger: CCATGTCCCCCAGGACGAAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAAGCAAGATGGACAGGCTGATGGAAATCCTTAACAGCATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 90 bp | CCGTCTTCGGTCATTTCTCCTCCTTCGGAACAACTTCTTGGTATGTaGAATCTCTGCTTCGTGGGGCATCGGATGGTAGCCCTGCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSSVISPPSEQLLGM*NLCFVGHRMVALPG Trigger: ACCTGGCAGGGCTACCATCCGATGCCCCACGAAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAGGAGGAGAAATGACCGAAGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | TGGGCGGAGCCTAAAAAGGCTCAATATCAGAGCATCATGGCCAGACAGGACAACAGGGAGTTGTCCTTGTaGCCATTCTGCTGTGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: WAEPKKAQYQSIMARQDNRELSL*PFCCGG Trigger: CCCGCCACAGCAGAATGGCAACAAGGACAACTCCCT...GTTGTCCTGTCTGGCCATGATGCTCTGATATTGAGCCTTTTTAGGCTCCGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGCTGCCCGCTTCTCCCTaGTCTCCCGGTGGATGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LYLASSHWSSRPYEGMLLLPASP*SPGGCF Trigger: GAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAG...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | CCCACTTGTAGTTTGGGTTCAGCTGGGAAGCAGGATATACGGGTAGATGGAAGGAGCATCTCCTCAGAGTaGGTGGAGTTCTGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTCSLGSAGKQDIRVDGRSISSE*VEFCAS Trigger: GGAGGCGCAGAACTCCACCAACTCTGAGGAGATGCT...CCTTCCATCTACCCGTATATCCTGCTTCCCAGCTGAACCCAAACTACAAGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | TCATCAGAGGCAGGCTTTGATAGGCCGTTCCTCCCGCAGCAGGAGAGGCTCTGTCTTCGGAACAACTTCTaGGTATGTGCAATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSEAGFDRPFLPQQERLCLRNNF*VCAISA Trigger: AGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAG...ACAGAGCCTCTCCTGCTGCGGGAGGAACGGCCTATCAAAGCCTGCCTCTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | TTATATCTTGCATCTTCACACTGGTCCTCAAGGCCCTACGAGGGCATGCTCTTGGGGCCGTCTTCAAGTTaGGGGTTCTCAACGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LYLASSHWSSRPYEGMLLGPSSS*GFSTVT Trigger: CGTGACCGTTGAGAACCCCAAACTTGAAGACGGCCC...CAAGAGCATGCCCTCGTAGGGCCTTGAGGACCAGTGTGAAGATGCAAGATATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS-3UTR CAA 90 bp | ACTTCATTGTCTATCTGGCTGCCTACCAAACCGTCCCAGTCAGGACCCAATGATATGAAGGAGGTGAGCTaGGCATCCACGTCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSLSIWLPTKPSQSGPNDMKEVS*ASTSLL Trigger: CAGCAGCGACGTGGATGCCAAGCTCACCTCCTTCAT...ATCATTGGGTCCTGACTGGGACGGTTTGGTAGGCAGCCAGATAGACAATGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | TTTGCTGCCGTCTTCGGTCATTTCTCCTCCTTCGGAACAACTTCTTaGTATGTGCAATCTCTGCTTCGTGGGGCATCGGATGGTAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: FAAVFGHFSSFGTTS*YVQSLLRGASDGSP Trigger: AGGGCTACCATCCGATGCCCCACGAAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAGGAGGAGAAATGACCGAAGACGGCAGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 90 bp | ATTTCTCATGCTGTTAAGGATTTCCATCAGCCTGTCCATCTTGCTTaGCTGAGGGCTGCTTGTCTCTACTGCCACTTCGTCCTGGGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ISHAVKDFHQPVHLA*LRAACLYCHFVLGD Trigger: GTCCCCCAGGACGAAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAAGCAAGATGGACAGGCTGATGGAAATCCTTAACAGCATGAGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS-3UTR CAA 90 bp | CTACTGTGGCTTGAGTCCCTACCATCAGTCTCTTCCTTCCTCAAGGTCCTGCTTAGCATGTCCAGGGAGTaGTCCTTGTTGCCATTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLWLESLPSVSSFLKVLLSMSRE*SLLPFC Trigger: GCAGAATGGCAACAAGGACAACTCCCTGGACATGCT...AAGCAGGACCTTGAGGAAGGAAGAGACTGATGGTAGGGACTCAAGCCACAGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | TGGGGCACACCAGCACTCGGAAGGGCTCGCCAGTGCTaGTCCGCATGGTGCCGAACACCTCACACAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: WGTPALGRARQC*SAWCRTPHTGR Trigger: CCTTCCTGTGTGAGGTGTTCGGCACCATGCGGAGCAGCACTGGCGAGCCCTTCCGAGTGCTGGTGTGCCCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | CCTGTGACTGCAAGAGCTCCCGGAGGCACGTGTAGATaGGGCACACCAGCACTCGGAAGGGCTCGCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PVTARAPGGTCR*GTPALGRARQC Trigger: GCACTGGCGAGCCCTTCCGAGTGCTGGTGTGCCCCATCTACACGTGCCTCCGGGAGCTCTTGCAGTCACAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 72 bp | GCCCCTGCACCTGGTACTCCAGCACGTAGCTGTCAATaGAGCGCTCCAGCTCCTCGATCTCCTGGGAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: APAPGTPARSCQ*SAPAPRSPGSG Trigger: GCCGCTCCCAGGAGATCGAGGAGCTGGAGCGCTTCATTGACAGCTACGTGCTGGAGTACCAGGTGCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 72 bp | GCAGAGCTTGGCGGCCGTGAAGGCGAAGCTGCGGTCTaGCACGGCCTTCTGGTAGATGGTCCGCACGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: AELGGREGEAAV*HGLLVDGPHDL Trigger: GAGATCGTGCGGACCATCTACCAGAAGGCCGTGTCAGACCGCAGCTTCGCCTTCACGGCCGCCAAGCTCTGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | AGATGGGGCACACCAGCACTCGGAAGGGCTCGCCAGTaGTGCTCCGCATGGTGCCGAACACCTCACACAGGA | + |
|
Preference number: 6 (lower is better) Translates to: RWGTPALGRARQ*CSAWCRTPHTG Trigger: TCCTGTGTGAGGTGTTCGGCACCATGCGGAGCAGCACTGGCGAGCCCTTCCGAGTGCTGGTGTGCCCCATCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | GACTGTGTCCTCTGGCTCTCGCCGTCACCCTCTGTCTaGTCGGTCAGCAGCCCCTGCACCTGGTACTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DCVLWLSPSPSV*SVSSPCTWYSS Trigger: GCTGGAGTACCAGGTGCAGGGGCTGCTGACCGACAAGACAGAGGGTGACGGCGAGAGCCAGAGGACACAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | CCCTCGACCATGAAGAGGGCCATCTTGTCGCAGAGCTaGGCGGCCGTGAAGGCGAAGCTGCGGTCTGACACG | + |
|
Preference number: 6 (lower is better) Translates to: PSTMKRAILSQS*AAVKAKLRSDT Trigger: CGTGTCAGACCGCAGCTTCGCCTTCACGGCCGCCAAGCTCTGCGACAAGATGGCCCTCTTCATGGTCGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | AGCAGGCTCCGGAACTTGGTCCCCTCGACCATGAAGAGGGCCATCTaGTCGCAGAGCTTGGCGGCCGTGAAGGCGAAGCTGCGGTCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRLRNLVPSTMKRAI*SQSLAAVKAKLRSD Trigger: GTCAGACCGCAGCTTCGCCTTCACGGCCGCCAAGCTCTGCGACAAGATGGCCCTCTTCATGGTCGAGGGGACCAAGTTCCGGAGCCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | GGCTCAAGGCCACTGTGTCCGGTGTCCCCTGGGCCGTCTTCAAGTTaGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTGCGGTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSRPLCPVSPGPSSS*GFSTVTVSLALRWL Trigger: CAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGAAGACGGCCCAGGGGACACCGGACACAGTGGCCTTGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | AACTTGGTCCCCTCGACCATGAAGAGGGCCATCTTGTCGCAGAGCTaGGCGGCCGTGAAGGCGAAGCTGCGGTCTGACACGGCCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: NLVPSTMKRAILSQS*AAVKAKLRSDTAFW Trigger: CCAGAAGGCCGTGTCAGACCGCAGCTTCGCCTTCACGGCCGCCAAGCTCTGCGACAAGATGGCCCTCTTCATGGTCGAGGGGACCAAGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 72 bp | GCGTCAGAGGGTTCCAGCTGTTGGCGTGGAGCTCGATaGCCTCCAGGAGCAGGGACCGGGTTAGCATGGACT | + |
|
Preference number: 6 (lower is better) Translates to: ASEGSSCWRGAR*PPGAGTGLAWT Trigger: AGTCCATGCTAACCCGGTCCCTGCTCCTGGAGGTCATCGAGCTCCACGCCAACAGCTGGAACCCTCTGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | GTTTGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTaGGGTGGCTGCCCGCTTCTCCCTTGTCTCCCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: VWGSQRSRSLWR*GGCPLLPCLPV Trigger: CACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | GCGCTGGCTAGGAGCTCCGTCATCATCTCTGGCAGCTaGTCCTCTAGCAGCCGGCCTGTGCTTTGTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALARSSVIISGS*SSSSRPVLCSS Trigger: GGAGCTACAAAGCACAGGCCGGCTGCTAGAGGAGCAGCTGCCAGAGATGATGACGGAGCTCCTAGCCAGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | GGCAGGGGCTGCTTGGGTGTGTGGCGGACCTTCCGATaGAACTGGGTGAAGTCCAGCTTTTCAGGCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGCLGVWRTFR*NWVKSSFSGCR Trigger: CCTGCAGCCTGAAAAGCTGGACTTCACCCAGTTCCATCGGAAGGTCCGCCACACACCCAAGCAGCCCCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | GGGTTCTCAACGGTCACGGTCTCTTTGGCGTTGCGGTaGCTGCCCGCTTCTCCCTTGTCTCCCGGTGGATGT | + |
|
Preference number: 6 (lower is better) Translates to: GFSTVTVSLALR*LPASPLSPGGC Trigger: ACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | CGGAACTTGGTCCCCTCGACCATGAAGAGGGCCATCTaGTCGCAGAGCTTGGCGGCCGTGAAGGCGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RNLVPSTMKRAI*SQSLAAVKAKL Trigger: CAGCTTCGCCTTCACGGCCGCCAAGCTCTGCGACAAGATGGCCCTCTTCATGGTCGAGGGGACCAAGTTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | CCTTGTTGCCATTCTGCTGTGGCGGGGCTCGCCCTCTaGAGAAGGAACAGCTACCATCCAGCTGCTCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PCCHSAVAGLAL*RRNSYHPAALC Trigger: GCAGAGAGCAGCTGGATGGTAGCTGTTCCTTCTCCAGAGGGCGAGCCCCGCCACAGCAGAATGGCAACAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | TCTCTGTCGATGTGTGGCAGGGGCTGCTTGGGTGTGTaGCGGACCTTCCGATGGAACTGGGTGAAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SLSMCGRGCLGV*RTFRWNWVKSS Trigger: GCTGGACTTCACCCAGTTCCATCGGAAGGTCCGCCACACACCCAAGCAGCCCCTGCCACACATCGACAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | AGGCGAAGCTGCGGTCTGACACGGCCTTCTGGTAGATaGTCCGCACGATCTCCCCCAGCATCTCCTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RRSCGLTRPSGR*SARSPPASPQS Trigger: ACTCTGAGGAGATGCTGGGGGAGATCGTGCGGACCATCTACCAGAAGGCCGTGTCAGACCGCAGCTTCGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | AGTTTGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTaGCGGTGGCTGCCCGCTTCTCCCTTGTCTCCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLGFSTVTVSLA*RWLPASPLSPG Trigger: ACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | GGGATGTCCCGGTCCTTTTCCTTCAGCCTTCGCCTCAGCCTGTCTTaGGAAGACTGGAGCAGGGTGATTTTGGGCCGCTCCCTGAGACGC | + |
|
Preference number: 6 (lower is better) Translates to: GMSRSFSFSLRLSLS*EDWSRVILGRSLRR Trigger: GCGTCTCAGGGAGCGGCCCAAAATCACCCTGCTCCAGTCTTCCAAAGACAGGCTGAGGCGAAGGCTGAAGGAAAAGGACCGGGACATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | GCTCGCCCTCTGGAGAAGGAACAGCTACCATCCAGCTaGTCTCTGCAGTCAGCCGTCCACTGGGAGATATGG | + |
|
Preference number: 6 (lower is better) Translates to: ARPLEKEQLPSS*SLQSAVHWEIW Trigger: CCATATCTCCCAGTGGACGGCTGACTGCAGAGAGCAGCTGGATGGTAGCTGTTCCTTCTCCAGAGGGCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | TTTCCACACCCTTCTCTGTCGATGTGTGGCAGGGGCTaGTTGGGTGTGTGGCGGACCTTCCGATGGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FPHPSLSMCGRG*LGVWRTFRWNW Trigger: CCAGTTCCATCGGAAGGTCCGCCACACACCCAAGCAGCCCCTGCCACACATCGACAGAGAAGGGTGTGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | TCTCAACGGTCACGGTCTCTTTGGCGTTGCGGTGGCTaGCCGCTTCTCCCTTGTCTCCCGGTGGATGTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SQRSRSLWRCGG*PLLPCLPVDVS Trigger: TGAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | CACTGTGTCCGGTGTCCCCTGGGCCGTCTTCAAGTTTaGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: HCVRCPLGRLQV*GSQRSRSLWRC Trigger: GCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGAAGACGGCCCAGGGGACACCGGACACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | GTGTTTGGCACTGCCTGGCTGATGGTCACCATGCTGTaGGGGCTTGTTCCCTCCTGGAGGTCTTTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: VFGTAWLMVTML*GLVPSWRSLLP Trigger: CGGCAGCAAAGACCTCCAGGAGGGAACAAGCCCCAACAGCATGGTGACCATCAGCCAGGCAGTGCCAAACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | CCACTGTGTCCGGTGTCCCCTGGGCCGTCTTCAAGTTaGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLCPVSPGPSSS*GFSTVTVSLAL Trigger: CAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGAAGACGGCCCAGGGGACACCGGACACAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | CCATCAGCCTGTCCATCTTGCTTGGCTGAGGGCTGCTaGTCTCTACTGCCACTTCGTCCTGGGGGACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: PSACPSCLAEGC*SLLPLRPGGHG Trigger: CCCATGTCCCCCAGGACGAAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAAGCAAGATGGACAGGCTGATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | ATGGTCCGCACGATCTCCCCCAGCATCTCCTCAGAGTaGGTGGAGTTCTGCGCCTCCTCCATGAAGGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVRTISPSISSE*VEFCASSMKEV Trigger: CACCTCCTTCATGGAGGAGGCGCAGAACTCCACCAACTCTGAGGAGATGCTGGGGGAGATCGTGCGGACCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | TTTCCCTTTCCACACCCTTCTCTGTCGATGTGTGGCAGGGGCTGCTaGGGTGTGTGGCGGACCTTCCGATGGAACTGGGTGAAGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FPFPHPSLSMCGRGC*GVWRTFRWNWVKSS Trigger: GCTGGACTTCACCCAGTTCCATCGGAAGGTCCGCCACACACCCAAGCAGCCCCTGCCACACATCGACAGAGAAGGGTGTGGAAAGGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | GTCCCTGTTGTGTTTGGCACTGCCTGGCTGATGGTCACCATGCTGTaGGGGCTTGTTCCCTCCTGGAGGTCTTTGCTGCCGTCTTCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VPVVFGTAWLMVTML*GLVPSWRSLLPSSV Trigger: GACCGAAGACGGCAGCAAAGACCTCCAGGAGGGAACAAGCCCCAACAGCATGGTGACCATCAGCCAGGCAGTGCCAAACACAACAGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | CCGTCTTCAAGTTTGGGGTTCTCAACGGTCACGGTCTCTTTGGCGTaGCGGTGGCTGCCCGCTTCTCCCTTGTCTCCCGGTGGATGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSSSLGFSTVTVSLA*RWLPASPLSPGGCF Trigger: GAAACATCCACCGGGAGACAAGGGAGAAGCGGGCAGCCACCGCAACGCCAAAGAGACCGTGACCGTTGAGAACCCCAAACTTGAAGACGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | GGGACCGGGTTAGCATGGACTCTGAGGGGCACAGCATCTTATCTCTaGCGCTGGCTAGGAGCTCCGTCATCATCTCTGGCAGCTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTGLAWTLRGTASYL*RWLGAPSSSLAAAP Trigger: AGGAGCAGCTGCCAGAGATGATGACGGAGCTCCTAGCCAGCGCAAGAGATAAGATGCTGTGCCCCTCAGAGTCCATGCTAACCCGGTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | CCGCTTCTCCCTTGTCTCCCGGTGGATGTTTCATGTTaGCGTGATGCCAGCGTCGGTTCTGGCTGTAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLPCLPVDVSC*RDASVGSGCSH Trigger: ATGGCTACAGCCAGAACCGACGCTGGCATCACGGCAACATGAAACATCCACCGGGAGACAAGGGAGAAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | TCCTTCTGGAGCATGTTGAGGAGCAGGCTCCGGAACTaGGTCCCCTCGACCATGAAGAGGGCCATCTTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFWSMLRSRLRN*VPSTMKRAILS Trigger: CGACAAGATGGCCCTCTTCATGGTCGAGGGGACCAAGTTCCGGAGCCTGCTCCTCAACATGCTCCAGAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 90 bp | ACAGTGAAGTCCTTCTGGAGCATGTTGAGGAGCAGGCTCCGGAACTaGGTCCCCTCGACCATGAAGAGGGCCATCTTGTCGCAGAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TVKSFWSMLRSRLRN*VPSTMKRAILSQSL Trigger: CAAGCTCTGCGACAAGATGGCCCTCTTCATGGTCGAGGGGACCAAGTTCCGGAGCCTGCTCCTCAACATGCTCCAGAAGGACTTCACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 72 bp | TTCTGGTGGTCCCTGTTGTGTTTGGCACTGCCTGGCTaGTGGTCACCATGCTGTTGGGGCTTGTTCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FWWSLLCLALPG*WSPCCWGLFPP Trigger: AGGAGGGAACAAGCCCCAACAGCATGGTGACCATCAGCCAGGCAGTGCCAAACACAACAGGGACCACCAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CCA 72 bp | TGGACTCTGAGGGGCACAGCATCTTATCTCTTGCGCTaGCTAGGAGCTCCGTCATCATCTCTGGCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: WTLRGTASYLLR*LGAPSSSLAAA Trigger: AGCAGCTGCCAGAGATGATGACGGAGCTCCTAGCCAGCGCAAGAGATAAGATGCTGTGCCCCTCAGAGTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | AGGTCCCAGGTGGCACCACTGAAGGAATCAAAGGTATaGGCGGCCCAGATATCTGTGCCCAGCATGTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSQVAPLKESKV*AAQISVPSMSR Trigger: CCTGGACATGCTGGGCACAGATATCTGGGCCGCCAATACCTTTGATTCCTTCAGTGGTGCCACCTGGGACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS GCA 72 bp | CCTCCTTCGGAACAACTTCTTGGTATGTGCAATCTCTaGTTCGTGGGGCATCGGATGGTAGCCCTGCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PPSEQLLGMCNL*FVGHRMVALPG Trigger: ACCTGGCAGGGCTACCATCCGATGCCCCACGAAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | ACCATGCTGTTGGGGCTTGTTCCCTCCTGGAGGTCTTaGCTGCCGTCTTCGGTCATTTCTCCTCCTTCGGAA | + |
|
Preference number: 6 (lower is better) Translates to: TMLLGLVPSWRS*LPSSVISPPSE Trigger: TTCCGAAGGAGGAGAAATGACCGAAGACGGCAGCAAAGACCTCCAGGAGGGAACAAGCCCCAACAGCATGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | GTGGAGTTCTGCGCCTCCTCCATGAAGGAGGTGAGCTaGGCATCCACGTCGCTGCTGTTATTTCTCATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VEFCASSMKEVS*ASTSLLLFLML Trigger: CAGCATGAGAAATAACAGCAGCGACGTGGATGCCAAGCTCACCTCCTTCATGGAGGAGGCGCAGAACTCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS CAA 72 bp | TTAGCATGGACTCTGAGGGGCACAGCATCTTATCTCTaGCGCTGGCTAGGAGCTCCGTCATCATCTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAWTLRGTASYL*RWLGAPSSSLA Trigger: TGCCAGAGATGATGACGGAGCTCCTAGCCAGCGCAAGAGATAAGATGCTGTGCCCCTCAGAGTCCATGCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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| CDS TCA 72 bp | TTAAGGATTTCCATCAGCCTGTCCATCTTGCTTGGCTaGGGGCTGCTTGTCTCTACTGCCACTTCGTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRISISLSILLG*GLLVSTATSSW Trigger: CCAGGACGAAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAAGCAAGATGGACAGGCTGATGGAAATCCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS CCA 72 bp | GCTGTTAAGGATTTCCATCAGCCTGTCCATCTTGCTTaGCTGAGGGCTGCTTGTCTCTACTGCCACTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: AVKDFHQPVHLA*LRAACLYCHFV Trigger: GACGAAGTGGCAGTAGAGACAAGCAGCCCTCAGCCAAGCAAGATGGACAGGCTGATGGAAATCCTTAACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS GCA 72 bp | GTCATTTCTCCTCCTTCGGAACAACTTCTTGGTATGTaGAATCTCTGCTTCGTGGGGCATCGGATGGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VISPPSEQLLGM*NLCFVGHRMVA Trigger: GGCTACCATCCGATGCCCCACGAAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAGGAGGAGAAATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
||
| CDS CCA 72 bp | GTCTTCGGTCATTTCTCCTCCTTCGGAACAACTTCTTaGTATGTGCAATCTCTGCTTCGTGGGGCATCGGAT | + |
|
Preference number: 6 (lower is better) Translates to: VFGHFSSFGTTS*YVQSLLRGASD Trigger: ATCCGATGCCCCACGAAGCAGAGATTGCACATACCAAGAAGTTGTTCCGAAGGAGGAGAAATGACCGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165559.3 |
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