Pregenerated sensors for CTDSPL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033411Ensembl transcript IDs: ENSMUST00000036647.13, ENSMUST00000110572.2, ENSMUST00000110574.8, ENSMUST00000110578.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGCCTGAACTCGTTCTCCTCAAAGGCTAGTGAGCACAGTGAAGTCTaGGGTATACCTTTATCCATTAAACGTGTGCCATTGCAAGATATT | + |
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Preference number: 1 (lower is better) Translates to: CLNSFSSKASEHSEV*GIPLSIKRVPLQDI Trigger: AATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCTTTGAGGAGAACGAGTTCAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR GCA 90 bp | GTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTaGCATTGCAAGATATTACCATCTGGAATACATGTCATCACAATG | + |
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Preference number: 1 (lower is better) Translates to: VSTVKSEVYLYPLNV*HCKILPSGIHVITM Trigger: CATTGTGATGACATGTATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR GCA 90 bp | AGGAGATTACACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTaGATTAGAGAACCAAGGCGTGACGACTTATTTTCATATAGCATA | + |
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Preference number: 1 (lower is better) Translates to: RRLHATIKISTSCGS*IREPRRDDLFSYSI Trigger: TATGCTATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTGTAATCTCCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCACAGGATTATGCATAGCCACCGTTAGGTACCACAGCTGTTACACAGAGAGCCCAACAGGTGCCTaGACTCGTTCTCCTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: CATGLCIATVRYHSCYTESPTGA*TRSPQR Trigger: CCTTTGAGGAGAACGAGTTCAGGCACCTGTTGGGCT...CTCTGTGTAACAGCTGTGGTACCTAACGGTGGCTATGCATAATCCTGTGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGAGTGTACTGTAGCCCAACAGGTGCCTaGACTCGTTCTCCTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: IENHYEHIDCTGGPGVYCSPTGA*TRSPQR Trigger: CCTTTGAGGAGAACGAGTTCAGGCACCTGTTGGGCT...ACAGTACACTCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTATGAGCACATTGACTaGACTGGTGGCCCGGGAGTG | + |
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Preference number: 2 (lower is better) Translates to: VACCVLHGPMAPAFTIVMYEHID*TGGPGV Trigger: CACTCCCGGGCCACCAGTGCAGTCAATGTGCTCATA...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTGCCCACAGGCACTATaGTATAAGTGTTTCCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: VYTGSLLCASWTHGPCIYCPQAL*YKCFPF Trigger: AAAGGGGAAACACTTATACCATAGTGCCTGTGGGCA...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACGAGCACAGTGAAGTCTaGGGTATACCTTTATCCATT | + |
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Preference number: 2 (lower is better) Translates to: VYTGSLLCASWTHGPCIYEHSEV*GIPLSI Trigger: AATGGATAAAGGTATACCTCAGACTTCACTGTGCTC...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGACTGAGTCACTGTGCTaGATACTTCCTTCCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: VACCVLHGPMAPAFTIVMTESLC*ILPSWR Trigger: TCTCCAGGAAGGAAGTATTCAGCACAGTGACTCAGT...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGAGTGTACTGTACTGAGTCACTGTGCTaGATACTTCCTTCCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: IENHYEHIDCTGGPGVYCTESLC*ILPSWR Trigger: TCTCCAGGAAGGAAGTATTCAGCACAGTGACTCAGT...ACAGTACACTCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR TCA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGAACTGAGTCACTGTGCTaGATACTTCCTTCCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SYSIENHYEHIDCTGGPGTESLC*ILPSWR Trigger: TCTCCAGGAAGGAAGTATTCAGCACAGTGACTCAGT...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACGGTACTACCAGCCCATaGAAAGTAAAAATACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: VYTGSLLCASWTHGPCIYGTTSP*KVKILS Trigger: ACTCAGTATTTTTACTTTGCATGGGCTGGTAGTACC...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGGTACCACAGCTGTTACACAGAGCTTTAAACTGATTGTAACTGGGAGCATAAGCCCAACAGGTGCCTaGACTCGTTCTCCTCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: LGTTAVTQSFKLIVTGSISPTGA*TRSPQR Trigger: CCTTTGAGGAGAACGAGTTCAGGCACCTGTTGGGCT...TATGCTCCCAGTTACAATCAGTTTAAAGCTCTGTGTAACAGCTGTGGTACCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACAACAAATATACAATATaGAGGCAGACAAAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VYTGSLLCASWTHGPCIYNKYTI*RQTKQE Trigger: TTCCTGCTTTGTCTGCCTGCATATTGTATATTTGTT...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACATAAAGATGCCCAGGTaGCCTAAAGATAAATACATT | + |
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Preference number: 2 (lower is better) Translates to: VYTGSLLCASWTHGPCIYIKMPR*PKDKYI Trigger: AATGTATTTATCTTTAGGGCACCTGGGCATCTTTAT...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGAACTGGCCATTCCTGTTaGAATGAGAATAGTGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SYSIENHYEHIDCTGGPGTGHSC*NENSEV Trigger: TACTTCACTATTCTCATTTCAACAGGAATGGCCAGT...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGAACTACCCAGTCTCTTaGTTTTTGAAGATTTCACCT | + |
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Preference number: 2 (lower is better) Translates to: VACCVLHGPMAPAFTIVMNYPVS*FLKISP Trigger: AGGTGAAATCTTCAAAAATCAAGAGACTGGGTAGTT...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTTAAACGTGTGCCATTaGAAGATATTACCATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: VACCVLHGPMAPAFTIVMLNVCH*KILPSG Trigger: TCCAGATGGTAATATCTTGCAATGGCACACGTTTAA...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATTGTGCCACAGGATTATaGATAGCCACCGTTAGGTAC | + |
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Preference number: 2 (lower is better) Translates to: TSCGSCIREPRRDDLFSYCATGL*IATVRY Trigger: GTACCTAACGGTGGCTATGCATAATCCTGTGGCACA...ATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTGATCTTGTACAGGTTTTaGGGTTTGCTGTATAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SLLCASWTHGPCIYYSHVILYRF*GLLYKH Trigger: ATGCTTATACAGCAAACCCCAAAACCTGTACAAGAT...CACATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTGAACAAATATACAATATaGAGGCAGACAAAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SLLCASWTHGPCIYYSHVNKYTI*RQTKQE Trigger: TTCCTGCTTTGTCTGCCTGCATATTGTATATTTGTT...CACATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | CAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATACTGGCCATTCCTGTTaGAATGAGAATAGTGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: QPLVVAALENQGVTTYFHTGHSC*NENSEV Trigger: TACTTCACTATTCTCATTTCAACAGGAATGGCCAGT...ATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCACTGGCCATTCCTGTTaGAATGAGAATAGTGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCTGHSC*NENSEV Trigger: TACTTCACTATTCTCATTTCAACAGGAATGGCCAGT...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGATATCCATTAAACGTGTaGCATTGCAAGATATTACCA | + |
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Preference number: 2 (lower is better) Translates to: SYSIENHYEHIDCTGGPGYPLNV*HCKILP Trigger: TGGTAATATCTTGCAATGGCACACGTTTAATGGATA...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCAACTACCCAGTCTCTTaGTTTTTGAAGATTTCACCT | + |
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Preference number: 2 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCNYPVS*FLKISP Trigger: AGGTGAAATCTTCAAAAATCAAGAGACTGGGTAGTT...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | ACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATTTAAACGTGTGCCATTaGAAGATATTACCATCTGGA | + |
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Preference number: 2 (lower is better) Translates to: TSCGSCIREPRRDDLFSYLNVCH*KILPSG Trigger: TCCAGATGGTAATATCTTGCAATGGCACACGTTTAA...ATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGGTACCACAGCTGTTACACAGAGCTTTAAACTGATTGTAACTGGGAGCATAGGTACTACCAGCCCATaGAAAGTAAAAATACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LGTTAVTQSFKLIVTGSIGTTSP*KVKILS Trigger: ACTCAGTATTTTTACTTTGCATGGGCTGGTAGTACC...TATGCTCCCAGTTACAATCAGTTTAAAGCTCTGTGTAACAGCTGTGGTACCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCTCAAAGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACAAATATACAATATaGAGGCAGACAAAGCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: SPQRLVSTVKSEVYLYPLNKYTI*RQTKQE Trigger: TTCCTGCTTTGTCTGCCTGCATATTGTATATTTGTT...TAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCTTTGAGGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGGTTACGAATTGTCATCGATCTCTTTTAGGACCCAGAGAAAAATGGTAATAGGTACTACCAGCCCATaGAAAGTAAAAATACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: SGYELSSISFRTQRKMVIGTTSP*KVKILS Trigger: ACTCAGTATTTTTACTTTGCATGGGCTGGTAGTACC...TATTACCATTTTTCTCTGGGTCCTAAAAGAGATCGATGACAATTCGTAACCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACCCAGAGAAAAATGGTAATAAATCTGGTCAGGACTACATATATTACATGGATGTGGGAAGGGCTTTaGGACTGTATTTACTTAATT | + |
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Preference number: 2 (lower is better) Translates to: RTQRKMVINLVRTTYITWMWEGL*DCIYLI Trigger: AATTAAGTAAATACAGTCTCAAAGCCCTTCCCACAT...CCATGTAATATATGTAGTCCTGACCAGATTTATTACCATTTTTCTCTGGGTCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACCCAGAGAAAAATGGTAATAAATCTGGTCAGGACTACATATATTACATGGTATCCATTAAACGTGTaGCATTGCAAGATATTACCA | + |
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Preference number: 2 (lower is better) Translates to: RTQRKMVINLVRTTYITWYPLNV*HCKILP Trigger: TGGTAATATCTTGCAATGGCACACGTTTAATGGATA...CCATGTAATATATGTAGTCCTGACCAGATTTATTACCATTTTTCTCTGGGTCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR GCA 72 bp | AGGTCCTTAAGAGTTGTAATGTGTACACAGGTAGCTTaGTGTGTGCTTCATGGACCCATGGCCCCTGCATTT | + |
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Preference number: 3 (lower is better) Translates to: RSLRVVMCTQVA*CVLHGPMAPAF Trigger: AAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACACATTACAACTCTTAAGGACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTTCCACAAAACAGGCTaGCTCTACATGCTAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: VYTGSLLCASWTHGPCIYFHKTG*LYMLDF Trigger: AAAATCTAGCATGTAGAGCAAGCCTGTTTTGTGGAA...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTGTACAAAAGTGTATTGTaGACTCACCTACTGGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: SLLCASWTHGPCIYYSHVYKSVL*THLLAE Trigger: CTCAGCCAGTAGGTGAGTCAACAATACACTTTTGTA...CACATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTTACGAATTGTCATCGATCTCTTTTAGGACCCAGAGAAAAATGGTAATAACCACTATGAGCACATaGACTGCACTGGTGGCCCGG | + |
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Preference number: 3 (lower is better) Translates to: SGYELSSISFRTQRKMVITTMST*TALVAR Trigger: CCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGT...TATTACCATTTTTCTCTGGGTCCTAAAAGAGATCGATGACAATTCGTAACCAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR-3UTR CAA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGAATTAAACGTGTGCCATaGCAAGATATTACCATCTGG | + |
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Preference number: 3 (lower is better) Translates to: SYSIENHYEHIDCTGGPGIKRVP*QDITIW Trigger: CCAGATGGTAATATCTTGCAATGGCACACGTTTAAT...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR TCA 72 bp | TCGTTCTCCTCAAAGGCTAGTGAGCACAGTGAAGTCTaGGGTATACCTTTATCCATTAAACGTGTGCCATTG | + |
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Preference number: 3 (lower is better) Translates to: SFSSKASEHSEV*GIPLSIKRVPL Trigger: CAATGGCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCTTTGAGGAGAACGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR TCA 72 bp | TTTCCCACGTTACATTTCTCTACAAAAGTGTATTGTTaGCTCACCTACTGGCTGAGTAGGAGCTCATTCCCC | + |
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Preference number: 3 (lower is better) Translates to: FPTLHFSTKVYC*LTYWLSRSSFP Trigger: GGGGAATGAGCTCCTACTCAGCCAGTAGGTGAGTCAACAATACACTTTTGTAGAGAAATGTAACGTGGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR GCA 72 bp | TGTAACTGGGAGCATAACAGAGGTACTACCAGCCCATaGAAAGTAAAAATACTGAGTCACTGTGCTGAATAC | + |
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Preference number: 3 (lower is better) Translates to: CNWEHNRGTTSP*KVKILSHCAEY Trigger: GTATTCAGCACAGTGACTCAGTATTTTTACTTTGCATGGGCTGGTAGTACCTCTGTTATGCTCCCAGTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR GCA 72 bp | CACGCCACTATAAAAATATCAACCTCTTGTGGTAGCTaGATTAGAGAACCAAGGCGTGACGACTTATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: HATIKISTSCGS*IREPRRDDLFS Trigger: TGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTGATATTTTTATAGTGGCGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR GCA 72 bp | GTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTaGCATTGCAAGATATTACCATCTGGAATACATGTC | + |
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Preference number: 3 (lower is better) Translates to: VKSEVYLYPLNV*HCKILPSGIHV Trigger: GACATGTATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACCTCAGACTTCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTTACGAATTGTCATCGATCTCTTTTAGGACCCAGAGAAAAATGGTAATATTCCACAAAACAGGCTaGCTCTACATGCTAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: SGYELSSISFRTQRKMVIFHKTG*LYMLDF Trigger: AAAATCTAGCATGTAGAGCAAGCCTGTTTTGTGGAA...TATTACCATTTTTCTCTGGGTCCTAAAAGAGATCGATGACAATTCGTAACCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| 3UTR TCA 72 bp | ATAAGTGTTTCCCCTTTTAAGATGTGGGAAGGGCTTTaGGACTGTATTTACTTAATTCCTGATCAAGTACAT | + |
|
Preference number: 3 (lower is better) Translates to: ISVSPFKMWEGL*DCIYLIPDQVH Trigger: ATGTACTTGATCAGGAATTAAGTAAATACAGTCTCAAAGCCCTTCCCACATCTTAAAAGGGGAAACACTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| 3UTR CCA 72 bp | TCCATTAAACGTGTGCCATTGCAAGATATTACCATCTaGAATACATGTCATCACAATGGTTCATTCAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: SIKRVPLQDITI*NTCHHNGSFKS Trigger: TGATTTGAATGAACCATTGTGATGACATGTATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| 3UTR TCA 72 bp | GTGGGAAGGGCTTTGAGACTGTATTTACTTAATTCCTaGTCAAGTACATTGTCAACAATTATGTTTGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VGRALRLYLLNS*SSTLSTIMFVK Trigger: TTTGACAAACATAATTGTTGACAATGTACTTGATCAGGAATTAAGTAAATACAGTCTCAAAGCCCTTCCCAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR CCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGGCGCTGTGTCTGGATTaGACTGGACTGCTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VACCVLHGPMAPAFTIVMALCLD*TGLLRS Trigger: GCTTCTCAGCAGTCCAGTCCAATCCAGACACAGCGC...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCCACAGGATTATGCATAGCCACCGTTAGGTACCACAGCTGTTACACAGAGATTGGACTGGACTGCTaGGAAGCCTTCCGTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CATGLCIATVRYHSCYTEIGLDC*EAFRVL Trigger: GAGAACACGGAAGGCTTCTCAGCAGTCCAGTCCAAT...CTCTGTGTAACAGCTGTGGTACCTAACGGTGGCTATGCATAATCCTGTGGCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR TCA 90 bp | GTGTACACAGGTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACATCGAAATCTGTCTCTaGTGTGAGGCCGGACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VYTGSLLCASWTHGPCIYIEICL*CEAGHL Trigger: AAGATGTCCGGCCTCACATCAGAGACAGATTTCGAT...GTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTACCTGTGTACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTCTTTGCTCTGGCAGTaGGCTGTGTCTGGATTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VACCVLHGPMAPAFTIVMSLLWQ*AVSGLD Trigger: GTCCAATCCAGACACAGCGCACTGCCAGAGCAAAGA...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR CCA 90 bp | TGTGCCACAGGATTATGCATAGCCACCGTTAGGTACCACAGCTGTTACACAGAGGTGTCTGGATTGGACTaGACTGCTGAGAAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CATGLCIATVRYHSCYTEVSGLD*TAEKPS Trigger: GGAAGGCTTCTCAGCAGTCCAGTCCAATCCAGACAC...CTCTGTGTAACAGCTGTGGTACCTAACGGTGGCTATGCATAATCCTGTGGCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGATCTTTGCTCTGGCAGTaGGCTGTGTCTGGATTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SYSIENHYEHIDCTGGPGSLLWQ*AVSGLD Trigger: GTCCAATCCAGACACAGCGCACTGCCAGAGCAAAGA...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR TCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGATCGAAATCTGTCTCTaGTGTGAGGCCGGACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VACCVLHGPMAPAFTIVMIEICL*CEAGHL Trigger: AAGATGTCCGGCCTCACATCAGAGACAGATTTCGAT...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | CAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATTGGACTGGACTGCTaGGAAGCCTTCCGTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVAALENQGVTTYFHIGLDC*EAFRVL Trigger: GAGAACACGGAAGGCTTCTCAGCAGTCCAGTCCAAT...ATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | CAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATTCTTTGCTCTGGCAGTaGGCTGTGTCTGGATTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVAALENQGVTTYFHSLLWQ*AVSGLD Trigger: GTCCAATCCAGACACAGCGCACTGCCAGAGCAAAGA...ATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | GTAGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGCTAGCTCATTCAGACTaGAGTGCACTAGTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VACCVLHGPMAPAFTIVMLAHSD*SALVSH Trigger: ATGAGACACTAGTGCACTGCAGTCTGAATGAGCTAG...CATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR GCA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGAGGGGGCAGCAAATCATaGAATCGAAATCTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SYSIENHYEHIDCTGGPGGGSKS*NRNLSL Trigger: CAGAGACAGATTTCGATTGCATGATTTGCTGCCCCC...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATGCGCTGTGTCTGGATTaGACTGGACTGCTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSCGSCIREPRRDDLFSYALCLD*TGLLRS Trigger: GCTTCTCAGCAGTCCAGTCCAATCCAGACACAGCGC...ATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCCTCTGGAGTTACTGGTaGTGTAAGGGGTGGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCLWSYW*CKGWDI Trigger: GATATCCCACCCCTTACAGCACCAGTAACTCCAGAG...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | CAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATCTCTGGAGTTACTGGTaGTGTAAGGGGTGGGATATC | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVAALENQGVTTYFHLWSYW*CKGWDI Trigger: GATATCCCACCCCTTACAGCACCAGTAACTCCAGAG...ATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATGTGTCTGGATTGGACTaGACTGCTGAGAAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSCGSCIREPRRDDLFSYVSGLD*TAEKPS Trigger: GGAAGGCTTCTCAGCAGTCCAGTCCAATCCAGACAC...ATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCCGAGTACCCACTCTCTaGAGTTACTGGTGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCRVPTL*SYWCCK Trigger: CTTACAGCACCAGTAACTCCAGAGAGTGGGTACTCG...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTTTAAACTGATTGTAACTGGGAGCATAACAGAGGTACTACCAGCCCATTCACGGAAAAGCCGGTaGCTGACCAGTTGCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QSFKLIVTGSITEVLPAHSRKSR*LTSCFL Trigger: TAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGA...ATGGGCTGGTAGTACCTCTGTTATGCTCCCAGTTACAATCAGTTTAAAGCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCTCACGGAAAAGCCGGTaGCTGACCAGTTGCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCSRKSR*LTSCFL Trigger: TAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGA...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCGGGGGCAGCAAATCATaGAATCGAAATCTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCGGSKS*NRNLSL Trigger: CAGAGACAGATTTCGATTGCATGATTTGCTGCCCCC...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATCGAGTACCCACTCTCTaGAGTTACTGGTGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSCGSCIREPRRDDLFSYRVPTL*SYWCCK Trigger: CTTACAGCACCAGTAACTCCAGAGAGTGGGTACTCG...ATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110578.8 |
||
| CDS-3UTR TCA 90 bp | CAACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATTACCAGCTTCTCCATTaGCTGGACTTTTCCGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QPLVVAALENQGVTTYFHYQLLH*LDFSVL Trigger: TAAGACGGAAAAGTCCAGTCAATGGAGAAGCTGGTA...ATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCAAAGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAATCGAAATCTGTCTCTaGTGTGAGGCCGGACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPQRLVSTVKSEVYLYPLIEICL*CEAGHL Trigger: AAGATGTCCGGCCTCACATCAGAGACAGATTTCGAT...TAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCTTTGAGGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR TCA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCAACTACCAGCTCCATTaGCTGGACTTTTCCGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCNYQLH*LDFSVL Trigger: TAAGACGGAAAAGTCCAGTCAATGGAGCTGGTAGTT...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110578.8 |
||
| CDS-3UTR TCA 90 bp | GGTATACCTTTATCCATTAAACGTGTGCCATTGCAAGATATTACCATCTGGAATATTGGACTGGACTGCTaGGAAGCCTTCCGTGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GIPLSIKRVPLQDITIWNIGLDC*EAFRVL Trigger: GAGAACACGGAAGGCTTCTCAGCAGTCCAGTCCAAT...ATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCAAAGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTACTAGCTCATTCAGACTaGAGTGCACTAGTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPQRLVSTVKSEVYLYPLLAHSD*SALVSH Trigger: ATGAGACACTAGTGCACTGCAGTCTGAATGAGCTAG...TAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCTTTGAGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAGAGAAAAATGGTAATAAATCTGGTCAGGACTACATATATTACATGGGTGTCTGGATTGGACTaGACTGCTGAGAAGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTQRKMVINLVRTTYITWVSGLD*TAEKPS Trigger: GGAAGGCTTCTCAGCAGTCCAGTCCAATCCAGACAC...CCATGTAATATATGTAGTCCTGACCAGATTTATTACCATTTTTCTCTGGGTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAGAGAAAAATGGTAATAAATCTGGTCAGGACTACATATATTACATGGAATCTGTCTCTGATGTaGGGCCGGACATCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: RTQRKMVINLVRTTYITWNLSLM*GRTSSF Trigger: GAATGAAGATGTCCGGCCTCACATCAGAGACAGATT...CCATGTAATATATGTAGTCCTGACCAGATTTATTACCATTTTTCTCTGGGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | TCTGGTTACGAATTGTCATCGATCTCTTTTAGGACCCAGAGAAAAATGGTAATAAATCTGTCTCTGATGTaGGGCCGGACATCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SGYELSSISFRTQRKMVINLSLM*GRTSSF Trigger: GAATGAAGATGTCCGGCCTCACATCAGAGACAGATT...TATTACCATTTTTCTCTGGGTCCTAAAAGAGATCGATGACAATTCGTAACCAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | GGTATACCTTTATCCATTAAACGTGTGCCATTGCAAGATATTACCATCTGGAATAATCTGTCTCTGATGTaGGGCCGGACATCTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: GIPLSIKRVPLQDITIWNNLSLM*GRTSSF Trigger: GAATGAAGATGTCCGGCCTCACATCAGAGACAGATT...ATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | GGTATACCTTTATCCATTAAACGTGTGCCATTGCAAGATATTACCATCTGGAATTCACGGAAAAGCCGGTaGCTGACCAGTTGCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: GIPLSIKRVPLQDITIWNSRKSR*LTSCFL Trigger: TAAAAAGCAACTGGTCAGGCACCGGCTTTTCCGTGA...ATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR GCA 90 bp | GGTATACCTTTATCCATTAAACGTGTGCCATTGCAAGATATTACCATCTGGAATGGGGGCAGCAAATCATaGAATCGAAATCTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GIPLSIKRVPLQDITIWNGGSKS*NRNLSL Trigger: CAGAGACAGATTTCGATTGCATGATTTGCTGCCCCC...ATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | ACCTCTTGTGGTAGCTGCATTAGAGAACCAAGGCGTGACGACTTATTTTCATATACTCTCTGGAGTTACTaGTGCATTTTTATTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSCGSCIREPRRDDLFSYTLWSY*CIFICW Trigger: CCAGCAAATAAAAATGCACCAGTAACTCCAGAGAGT...ATATGAAAATAAGTCGTCACGCCTTGGTTCTCTAATGCAGCTACCACAAGAGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110572.2 |
||
| CDS-3UTR TCA 90 bp | AGGACCCAGAGAAAAATGGTAATAAATCTGGTCAGGACTACATATATTACATGGTACCAGCTTCTCCATTaGCTGGACTTTTCCGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RTQRKMVINLVRTTYITWYQLLH*LDFSVL Trigger: TAAGACGGAAAAGTCCAGTCAATGGAGAAGCTGGTA...CCATGTAATATATGTAGTCCTGACCAGATTTATTACCATTTTTCTCTGGGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR GCA 90 bp | GGTATACCTTTATCCATTAAACGTGTGCCATTGCAAGATATTACCATCTGGAATCTAGCTCATTCAGACTaGAGTGCACTAGTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GIPLSIKRVPLQDITIWNLAHSD*SALVSH Trigger: ATGAGACACTAGTGCACTGCAGTCTGAATGAGCTAG...ATTCCAGATGGTAATATCTTGCAATGGCACACGTTTAATGGATAAAGGTATACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CCA 90 bp | AGGACCCAGAGAAAAATGGTAATAAATCTGGTCAGGACTACATATATTACATGGCGAGTACCCACTCTCTaGAGTTACTGGTGCATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RTQRKMVINLVRTTYITWRVPTL*SYWCIF Trigger: AAAAATGCACCAGTAACTCCAGAGAGTGGGTACTCG...CCATGTAATATATGTAGTCCTGACCAGATTTATTACCATTTTTCTCTGGGTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110572.2 |
||
| CDS-3UTR CAA 90 bp | TGTGCCACAGGATTATGCATAGCCACCGTTAGGTACCACAGCTGTTACACAGAGTGCGCTGTGTCTGGATaGGACTGGACTGCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CATGLCIATVRYHSCYTECAVSG*DWTAEK Trigger: CTTCTCAGCAGTCCAGTCCAATCCAGACACAGCGCA...CTCTGTGTAACAGCTGTGGTACCTAACGGTGGCTATGCATAATCCTGTGGCACA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CAA 90 bp | AGCTTGCTGTGTGCTTCATGGACCCATGGCCCCTGCATTTACTATAGTCATGTGTGCGCTGTGTCTGGATaGGACTGGACTGCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLLCASWTHGPCIYYSHVCAVSG*DWTAEK Trigger: CTTCTCAGCAGTCCAGTCCAATCCAGACACAGCGCA...CACATGACTATAGTAAATGCAGGGGCCATGGGTCCATGAAGCACACAGCAAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCTTTAAACTGATTGTAACTGGGAGCATAACAGAGGTACTACCAGCCCATTGCGCTGTGTCTGGATaGGACTGGACTGCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QSFKLIVTGSITEVLPAHCAVSG*DWTAEK Trigger: CTTCTCAGCAGTCCAGTCCAATCCAGACACAGCGCA...ATGGGCTGGTAGTACCTCTGTTATGCTCCCAGTTACAATCAGTTTAAAGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110578.8 |
||
| CDS-3UTR CAA 90 bp | TCATATAGCATAGAAAACCACTATGAGCACATTGACTGCACTGGTGGCCCGGGACTGTTCCATGTCAAGTaGTTTCACTATCTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SYSIENHYEHIDCTGGPGLFHVK*FHYLLS Trigger: GCTGAGGAGATAGTGAAACAACTTGACATGGAACAG...TCCCGGGCCACCAGTGCAGTCAATGTGCTCATAGTGGTTTTCTATGCTATATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110578.8 |
||
| CDS-3UTR CAA 90 bp | AGGCTAGTGAGCACAGTGAAGTCTGAGGTATACCTTTATCCATTAAACGTGTGCCTACCAGCTTCTCCATaGACTGGACTTTTCCGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLVSTVKSEVYLYPLNVCLPASP*TGLFRL Trigger: AAGACGGAAAAGTCCAGTCAATGGAGAAGCTGGTAG...GCACACGTTTAATGGATAAAGGTATACCTCAGACTTCACTGTGCTCACTAGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| CDS-3UTR CAA 90 bp | TTAGGTACCACAGCTGTTACACAGAGCTTTAAACTGATTGTAACTGGGAGCATACTACCAGCTTCTCCATaGACTGGACTTTTCCGTCTT | + |
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Preference number: 5 (lower is better) Translates to: LGTTAVTQSFKLIVTGSILPASP*TGLFRL Trigger: AAGACGGAAAAGTCCAGTCAATGGAGAAGCTGGTAG...TATGCTCCCAGTTACAATCAGTTTAAAGCTCTGTGTAACAGCTGTGGTACCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 |
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| CDS GCA 72 bp | GTGAGCGCTGCATCTTCTAGCTCATTCAGACTGCAGTaGACTAGTGTCTCATCCAGATCTAAGACCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: VSAASSSSFRLQ*TSVSSRSKTRE Trigger: CTCCCTGGTCTTAGATCTGGATGAGACACTAGTGCACTGCAGTCTGAATGAGCTAGAAGATGCAGCGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000036647.13 ENSMUST00000110572.2 ENSMUST00000110574.8 ENSMUST00000110578.8 |
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